mRNA_P-littoralis_Contig959.20.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig959.20.2
Unique NamemRNA_P-littoralis_Contig959.20.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig959.20.2 vs. uniprot
Match: D7FZH2_ECTSI (Mago-bind domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZH2_ECTSI)

HSP 1 Score: 236 bits (601), Expect = 1.910e-75
Identity = 146/198 (73.74%), Postives = 162/198 (81.82%), Query Frame = 1 
Query:  121 MASAVPIGAVVKENGDVVIPATQRPDGTWRKERRLKAGYVPQDEVSKFESKGTQNQKFLKNRLPPGMAPEPGAEANKPLTAAQKKNQARAAARKXXXXXXXXXXXXSVDSDQDDA-GAAAAAKALGELKISGAVGGGRGGAASSGPVDTAKKIKALNKKIRQVEELEAKVTGGNVVPTDEQRQKLARKPTLLAELAEV 711
            MASAVPIGAV KENGDVV+PATQRPDGTWRKERR+K GY+PQDEV+KFE++GTQNQK+LKNRLPPGMAPE  +E NKPLTAAQKKNQAR     XXXXXXXXXXXX          G   AAKALG LK+S   GG  G   +S P+D+A+KIKALNKKIRQVEELEAKVT G VVPT+EQRQKLARKP L+AELAE+
Sbjct:    1 MASAVPIGAVAKENGDVVLPATQRPDGTWRKERRIKKGYIPQDEVAKFETRGTQNQKYLKNRLPPGMAPESASEPNKPLTAAQKKNQARXXXXXXXXXXXXXXXXXXXXXXXXXXDGVETAAKALGGLKVSAGGGGASGEQTASEPLDSARKIKALNKKIRQVEELEAKVTSGEVVPTEEQRQKLARKPALVAELAEL 198
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BLAST of mRNA_P-littoralis_Contig959.20.2 vs. uniprot
Match: A0A1S3K099_LINUN (partner of Y14 and mago n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3K099_LINUN)

HSP 1 Score: 101 bits (251), Expect = 1.010e-22
Identity = 88/213 (41.31%), Postives = 128/213 (60.09%), Query Frame = 1 
Query:   91 LLSLSLSHTHMASAVPI---GAVVKENGDVVIPATQRPDGTWRKERRLKAGYVPQDEVSKFESKGTQNQKFLKNR--LPPGMAPEPGAEANKPLTAAQKKNQARAAARKXXXXXXXXXXXXSVDSDQDDAGAAAAAKALGELKISGAVGGGRGGAASSGPVDTAKKIKALNKKIRQVEELEAKVTGGNVV-PTDEQRQKLARKPTLLAELAEV 711
            ++ L L  T MA A  +   G V  E G++ IPA++RPDGTWRK RR+K GYVPQ+EV  +ESKGTQ   F+KN+  LPPG+  EP ++ N P +A      +++A + XXXXXXXXX    V S          + +L E K++         A     VD AK+IK L KKI+Q+E+L+A++  G++  P  +Q +K++RK  +L E+ E+
Sbjct:    7 IVGLVLRPTSMAMAGALERDGVVRDEEGNMFIPASRRPDGTWRKARRVKDGYVPQEEVPVYESKGTQ---FVKNKPTLPPGLFVEPDSKHNNPGSAGIP-GLSKSAKKNXXXXXXXXXEAGDVTS---------LSSSLQETKLNDK----EKDAKPEVKVDPAKRIKTLKKKIKQIEDLQARIDSGDLKEPDKDQLEKISRKQQILTEIEEL 202
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BLAST of mRNA_P-littoralis_Contig959.20.2 vs. uniprot
Match: UPI001BB237CF (partner of Y14 and mago-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB237CF)

HSP 1 Score: 100 bits (250), Expect = 1.390e-22
Identity = 85/200 (42.50%), Postives = 105/200 (52.50%), Query Frame = 1 
Query:  121 MASAVPIGAVVKENGDVVIPATQRPDGTWRKERRLKAGYVPQDEVSKFESKGTQNQKFLKNRLPPGMAPEPG---AEANKPLTAAQKKNQARAAARKXXXXXXXXXXXXSVDSDQDDAGAAAAAKALGELKISGAVGGGRGGAASSGPV--DTAKKIKALNKKIRQVEELEAKVTGGNVV-PTDEQRQKLARKPTLLAEL 702
            MASA        E+G   +PATQRPDGTWRK RR+K GY+PQ+EV  +ESKG Q     K RLPPG+  +P     E +K LT A K          XXX          V+  +         K + E+ +        GG A S PV  D  K+IK L KKIRQ+EELEAK+  G V  P+ EQ +K+ARK  L  EL
Sbjct:   20 MASAAKENVETDESGQY-LPATQRPDGTWRKPRRVKPGYIPQEEVPLYESKGKQWMNS-KPRLPPGVYEDPAPAKVEESKALTKAAKXXXXXXXXXXXXXNEVGQVQNGDVEQLR---------KGVQEVSV--------GGGADSAPVVQDPQKRIKNLKKKIRQIEELEAKIASGEVAQPSKEQLEKIARKEALEDEL 200
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BLAST of mRNA_P-littoralis_Contig959.20.2 vs. uniprot
Match: A0A7M7RH58_STRPU (Mago-bind domain-containing protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7RH58_STRPU)

HSP 1 Score: 98.2 bits (243), Expect = 1.060e-21
Identity = 84/203 (41.38%), Postives = 109/203 (53.69%), Query Frame = 1 
Query:  121 MASAVPIGAVVKENGDVVIPATQRPDGTWRKERRLKAGYVPQDEVSKFESKGTQNQKFLKNRLPPGMAPEPGA------EANKPLTAAQKKNQARAAARKXXXXXXXXXXXXSVDSDQDDAGAAAAAKALGELKISGAVGGGRGGAASSGPV-DTAKKIKALNKKIRQVEELEAKVTGGNVV-PTDEQRQKLARKPTLLAELA 705
            MASA        E G   +PATQRPDGTWRK RR++ GYVPQ+EV  +ESKG Q     K RLPPG+  +P        E+ + L+ A KKN+       XXX         + D +Q         K + E+ +S       GGA S+  V D  K+IK L KKIRQ+EELEAK+  G V  P+ EQ +K++RK     EL+
Sbjct:    1 MASASTENLETDETGQY-LPATQRPDGTWRKPRRVRPGYVPQEEVPLYESKGKQ-WVSSKPRLPPGVYEDPAPAKVHVEESKQQLSKASKKNEXXXXXXXXXXDEGESAQVQNGDVEQ-------LRKGVQEVSVS-------GGAESAPAVQDPQKRIKNLKKKIRQIEELEAKIASGEVAQPSKEQLEKISRKDAFEEELS 187
[Close]
BLAST of mRNA_P-littoralis_Contig959.20.2 vs. uniprot
Match: A0A6P4Y4X9_BRABE (partner of Y14 and mago-like n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4Y4X9_BRABE)

HSP 1 Score: 96.3 bits (238), Expect = 6.650e-21
Identity = 84/186 (45.16%), Postives = 111/186 (59.68%), Query Frame = 1 
Query:  163 GDVVIPATQRPDGTWRKERRLKAGYVPQDEVSKFESKGTQNQKFLKNRLPPGMAPEPGAEANKPLTAAQKKNQARAAARKXXXXXXXXXXXXSVDSDQDDAGAAAAAKALGELKISGAVGGGR--GGAASSGPVDTAKKIKALNKKIRQVEELEAKVTGGNVVPTDE-QRQKLARKPTLLAELAEV 711
            G+  IPA+QRPDGTWRK RR+K GYVPQ+EV  +ESKGTQ  K  K  LPPG  P+P  E  KP +   K      AA+KXXXXXXXXXXXXS      D G     + + ++ +S      +   G +     + AKK+K L KK+RQ+EEL+AK+  G +   D+ Q  K+ RK  +L E+ E+
Sbjct:   16 GEKFIPASQRPDGTWRKARRVKQGYVPQEEVPVYESKGTQWMKS-KPTLPPGFHPDP-EEQEKPTSEEDKYAGMSKAAKKXXXXXXXXXXXXS------DGGVGPITQGVEQVNLSNQSQQAKINNGQSQDSTAEPAKKLKNLKKKLRQIEELQAKIESGEIAKPDKTQLDKIERKSDILKEIREL 193
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BLAST of mRNA_P-littoralis_Contig959.20.2 vs. uniprot
Match: A0A8C4Z6G0_GADMO (PYM homolog 1, exon junction complex associated factor n=2 Tax=Gadus morhua TaxID=8049 RepID=A0A8C4Z6G0_GADMO)

HSP 1 Score: 92.8 bits (229), Expect = 1.840e-19
Identity = 78/212 (36.79%), Postives = 112/212 (52.83%), Query Frame = 1 
Query:  106 LSHTHMASAVPIGAVVKENGDVVIPATQRPDGTWRKERRLKAGYVPQDEVSKFESKGTQNQKFLKNR--LPPGMAPEPGAEANK----PLTAAQKKNQARAAARKXXXXXXXXXXXXSVDSDQ---DDAGAAAAAKALGELKISGAVGGGRGGAASSGPVDTAKKIKALNKKIRQVEELEAKVTGGNVV-PTDEQRQKLARKPTLLAELAEV 711
            +SH    +A+P    V ++G   I +TQRPDGTWRK RR++ GY PQ+EV  +E+K     KF K++  LPPGM+P   A +N+    P  AA +       A++       XX     D D    + A +A    +L EL   GAVG G      S   +  KKIK L KK+RQ+EEL+ K+  G +  P+ +Q +K+ R   L  EL ++
Sbjct:    1 MSHPKTKTAIPYE--VDDSGKF-IASTQRPDGTWRKPRRVRDGYTPQEEVPVYENKFV---KFFKSKPDLPPGMSPADAAPSNRQQAVPGCAASEPTGLSKTAKRNMKRKEKXXQQQPADEDDAELESARSAVEGASLSELPAKGAVGTGPAADEPSAASEKVKKIKNLRKKLRQIEELQQKMDSGEISEPSKDQLEKVGRARALQEELEQL 206
[Close]
BLAST of mRNA_P-littoralis_Contig959.20.2 vs. uniprot
Match: A0A6P8X455_DROAB (Partner of Y14 and mago n=1 Tax=Drosophila albomicans TaxID=7291 RepID=A0A6P8X455_DROAB)

HSP 1 Score: 92.4 bits (228), Expect = 2.160e-19
Identity = 73/196 (37.24%), Postives = 99/196 (50.51%), Query Frame = 1 
Query:  175 IPATQRPDGTWRKERRLKAGYVPQDEVSKFESKGTQNQKFLKNRLPPGMAPEPGAEANKPLTAAQKKNQARA---------------AARKXXXXXXXXXXXXSVDSDQDDAGAAAAAKAL-GELKISGAVGGGRGGAASSGPVDTAKKIKALNKKIRQVEELEAKVTGGNVVPTD-EQRQKLARKPTLLAELAEV 711
            IPAT+RPDGTWRK RR+K GYVPQ+EV  +ESKG Q     +  +PPGM P   AE  K     +K  Q R                 A              S    ++D   AA AK L  ELK++          A S  VDTAK++K L KKIR++E++E+K+  GN    D +Q  K+ +K  +L +L ++
Sbjct:   13 IPATKRPDGTWRKARRVKDGYVPQEEVPLYESKGKQFVAQRQTGVPPGMCPLVAAELKKTHEKKEKAKQQRVDRSTTTTTKAAQVTTPASATATTIKPAQFTASAPKAKNDREIAALAKTLDAELKLN----------ADSHEVDTAKQLKKLRKKIREIEQIESKMQAGNPNKLDKDQLDKVKKKSEILKQLTQL 198
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BLAST of mRNA_P-littoralis_Contig959.20.2 vs. uniprot
Match: A0A0Q9X930_DROMO (Partner of Y14 and mago n=3 Tax=mojavensis species complex TaxID=198037 RepID=A0A0Q9X930_DROMO)

HSP 1 Score: 91.7 bits (226), Expect = 3.870e-19
Identity = 70/194 (36.08%), Postives = 101/194 (52.06%), Query Frame = 1 
Query:  151 VKENGDVVIPATQRPDGTWRKERRLKAGYVPQDEVSKFESKGTQNQKFLKNRLPPGMAPEPGAEANKPLTAAQKKNQ--------ARAAARKXXXXXXXXXXXXSVDSDQDDAGAAAAAKALGE-LKISGAVGGGRGGAASSGPVDTAKKIKALNKKIRQVEELEAKVTGGNVVPTD-EQRQKLARKPTLLAEL 702
            ++ N   VIPAT+RPDGTWRK RR+K GYVPQ+EV  +ESKG Q     +  +PPGM P   AE  K     +K N+         + AA++              +    D+  +   K L + L I           A    VD AK+IK L KKIR++E++E+K+  G+    D +QR+K+ +KP +L +L
Sbjct:    5 LESNKGKVIPATKRPDGTWRKARRVKDGYVPQEEVPLYESKGKQFIAQRQTGVPPGMCPILAAEMKKVREKKEKANEKKVEKQQITKVAAKQTTNAKTPNATNNINNESPKDSELSKLTKTLDKNLTI-----------AEDPEVDLAKQIKKLKKKIREIEQIESKIQSGDSSKLDKDQREKVKKKPQILNQL 187
[Close]
BLAST of mRNA_P-littoralis_Contig959.20.2 vs. uniprot
Match: A0A6P8H7W1_ACTTE (partner of Y14 and mago-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8H7W1_ACTTE)

HSP 1 Score: 90.5 bits (223), Expect = 9.050e-19
Identity = 74/202 (36.63%), Postives = 106/202 (52.48%), Query Frame = 1 
Query:  121 MASAVPIGAVVKENGDVVIPATQRPDGTWRKERRLKAGYVPQDEVSKFESKGTQNQKFLKNRLPPGMAPEPGAEANKPLTAAQKKNQARAAARKXXXXXXXXXXXXSVDSDQDDAGAAAAAKALGELKISGA---VGGGRGGAASSGPVDTA-KKIKALNKKIRQVEELEAKVTGGNVVPTD-EQRQKLARKPTLLAELAEV 711
            MA  V   +    + D  IPATQRPDGTWRK RR+K G+VPQDEV K+ESKG Q    +  +LPPG+  +P     K LT  QKK+  +    K            S++          A K +  + ++ A        G   +S P +   KK+K L KK+RQ+EEL++K+  G V   +  QR+KLA+K  ++ E+ E+
Sbjct:    1 MADGVDGSSSASSDKDSWIPATQRPDGTWRKARRVKEGFVPQDEVEKYESKGKQWLNSMP-KLPPGLQEQP-----KILTKNQKKHDRKKNKNKESPGIQGQSMGSSLEE---------ATKKMENIHLNSAQTKTTTAAGTVYTSNPNEVKQKKLKNLKKKLRQIEELQSKIDSGEVKNIEANQREKLAKKEEIVDEIEEL 187
[Close]
BLAST of mRNA_P-littoralis_Contig959.20.2 vs. uniprot
Match: UPI00026586E8 (partner of Y14 and mago n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI00026586E8)

HSP 1 Score: 90.5 bits (223), Expect = 9.910e-19
Identity = 76/184 (41.30%), Postives = 109/184 (59.24%), Query Frame = 1 
Query:  175 IPATQRPDGTWRKERRLKAGYVPQDEVSKFESKGTQNQKFLKNRLPPGMAP-------EPGAEANKPLTAAQKKNQARAAARKXXXXXXXXXXXXSVDSDQD-DAGAAAAAKALGELKISGAVGGGRGGAASSGPVDTAKKIKALNKKIRQVEELEAKVTGGNVVPTDEQRQKLARKPTLLAEL 702
            IPA+QRPDGTWRK RR+K GY+PQDEV K+ES+G Q  + +K   PPG++P       +  AE   P  AA  K+        XXXXXXXXXXX  V+SDQ  +    +    +  L ++ +   G     +  P D +K+++AL KK+R++E L+ K+T G+  P  EQ +K+ RK  + AE+
Sbjct:    8 IPASQRPDGTWRKARRVKEGYIPQDEVPKYESRGRQLARAMKPEFPPGLSPAQMEAFKKKQAEIANPELAAANKSXXXXXXXXXXXXXXXXXXXV-VNSDQKLNQDVISLENGVKTLTVNSSEENG-----AEKPSDLSKRLRALRKKVREIESLQEKITTGSCQPNKEQSEKIQRKSEIEAEI 185
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig959.20.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZH2_ECTSI1.910e-7573.74Mago-bind domain-containing protein n=2 Tax=Ectoca... [more]
A0A1S3K099_LINUN1.010e-2241.31partner of Y14 and mago n=1 Tax=Lingula unguis Tax... [more]
UPI001BB237CF1.390e-2242.50partner of Y14 and mago-like n=1 Tax=Lytechinus va... [more]
A0A7M7RH58_STRPU1.060e-2141.38Mago-bind domain-containing protein n=1 Tax=Strong... [more]
A0A6P4Y4X9_BRABE6.650e-2145.16partner of Y14 and mago-like n=3 Tax=Branchiostoma... [more]
A0A8C4Z6G0_GADMO1.840e-1936.79PYM homolog 1, exon junction complex associated fa... [more]
A0A6P8X455_DROAB2.160e-1937.24Partner of Y14 and mago n=1 Tax=Drosophila albomic... [more]
A0A0Q9X930_DROMO3.870e-1936.08Partner of Y14 and mago n=3 Tax=mojavensis species... [more]
A0A6P8H7W1_ACTTE9.050e-1936.63partner of Y14 and mago-like n=1 Tax=Actinia teneb... [more]
UPI00026586E89.910e-1941.30partner of Y14 and mago n=1 Tax=Galendromus occide... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig959contigP-littoralis_Contig959:75751..84288 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FZH2
Preferred nameWIBG
PFAMsMago-bind
Model size716
Max annot lvl2759|Eukaryota
KEGG koko:K14294
KEGG Pathwayko03013,ko03015,map03013,map03015
Hectar predicted targeting categoryother localisation
GOsGO:0000184,GO:0000956,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006401,GO:0006402,GO:0006417,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0019222,GO:0019439,GO:0022411,GO:0030054,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032984,GO:0032991,GO:0034248,GO:0034250,GO:0034641,GO:0034655,GO:0035145,GO:0043021,GO:0043022,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045727,GO:0046483,GO:0046700,GO:0048518,GO:0048519,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1903259,GO:1990448,GO:2000112
Exons3
Evalue3.13e-76
EggNOG OGsKOG4325@1|root,KOG4325@2759|Eukaryota
Ec32 ortholog descriptionExon junction complex, Pym
Ec32 orthologEc-23_002860.1
Descriptionexon-exon junction complex disassembly
Cds size714
COG categoryS
BRITEko00000,ko00001,ko03019
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791872.8177202-CDS-P-littoralis_Contig959:75750..758911680791872.8177202-CDS-P-littoralis_Contig959:75750..75891Pylaiella littoralis U1_48CDSP-littoralis_Contig959 75751..75891 -
1680791872.8418083-CDS-P-littoralis_Contig959:77107..773981680791872.8418083-CDS-P-littoralis_Contig959:77107..77398Pylaiella littoralis U1_48CDSP-littoralis_Contig959 77108..77398 -
1680791872.857339-CDS-P-littoralis_Contig959:84006..842881680791872.857339-CDS-P-littoralis_Contig959:84006..84288Pylaiella littoralis U1_48CDSP-littoralis_Contig959 84007..84288 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig959.20.2prot_P-littoralis_Contig959.20.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig959 75751..84288 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig959.20.2

>prot_P-littoralis_Contig959.20.2 ID=prot_P-littoralis_Contig959.20.2|Name=mRNA_P-littoralis_Contig959.20.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=238bp
EYGKPRRPPGARGAGVRFNPRKPPLCSSPALLSLSLSHTHMASAVPIGAV
VKENGDVVIPATQRPDGTWRKERRLKAGYVPQDEVSKFESKGTQNQKFLK
NRLPPGMAPEPGAEANKPLTAAQKKNQARAAARKAKKAAERASGAASVDS
DQDDAGAAAAAKALGELKISGAVGGGRGGAASSGPVDTAKKIKALNKKIR
QVEELEAKVTGGNVVPTDEQRQKLARKPTLLAELAEVR
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mRNA from alignment at P-littoralis_Contig959:75751..84288-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig959.20.2 ID=mRNA_P-littoralis_Contig959.20.2|Name=mRNA_P-littoralis_Contig959.20.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=8538bp|location=Sequence derived from alignment at P-littoralis_Contig959:75751..84288- (Pylaiella littoralis U1_48)
GAATACGGGAAACCCCGTCGGCCACCGGGGGCGCGGGGTGCGGGAGTGCG
GTTCAATCCGAGGAAACCACCACTCTGTTCCTCTCCTGCTCTTCTTTCTC
TTTCTCTCTCGCATACACACATGGCGAGCGCCGTACCCATAGGCGCTGTT
GTCAAGGAGAACGGGGACGTGGTGATCCCCGCTACGCAACGCCCAGATGG
CACTTGGCGCAAAGAGCGACGACTGAAAGCCGGCTACGTCCCCCAGGACG
AAGTATCCAAATTCGAGTCGAAAGGAACACAGGTTTGTCCCCGTGTCCTC
TTGGCGCCTTCCCGCCTCGCGTGTATGTGATAGCGCTGACACTCATGTGG
CTACGCCAGGTAAAGCTGAGAAAGTGGTGATACGTATTACTCGGCATTAC
GCACGGTTTTTTGTTGCTGGTATCGTTGATATTGCACTGGTAGCTGTTGT
AAATTGTGAGCGCGCAGCACACTCCTCCTGGAAAGCTGTTGTCTGTCATG
TCTCGGAGCTCTGCACCGCGGCACAGCTGGTATTACACGAGCGTACTTGT
ATACCCGTATGCAAAGAATGATTCGATCATCTCTAACAAGAAAGTCACAG
CTACACGAGGAGCTGATGAGCCAAAAAATACTCGAAAGTGTCTGGCCCCA
GTGTCTGGAATTCGAACCCCCAAAAATCATGAGTTCAAGTCAGGCTACCA
GTAGCTAGTGGTGTTCAAGGATTAGCGCCTTTCAAGTAACATCTACCAGG
TACTGTAGCGCTGTGTTGCAAGGGCTTGCACGGGGCCGAAGGCCCCGTGC
AAGCGGGATGGGACGGGTTTGCTCGCCGCAGGCGGGAAAATTTTTAGGTC
CCATTGTCGATGGTATGGGATCCCATGGTCAGGCATTTGCCATCCCACTT
TAACGGGATGGGACGGTCCCACTTGCGTTGTATGTGGGATGGGAATGGGA
CGGGAAGCTGGGATGCTTAGCGAGAATGGGCATCACATGGGAATCCAGAA
AAATCCATTTGGGACGGGACGGGACTATTGTGTCATAGGGGGTGGCGGGA
CACTGCTGGGTTATGTGGGATTCCAACGTGGGAATCCAGTGTGGGACCAC
ACCGGACAGACAACATAGAAAATATATATATTATTCATACATTCGCCCCG
TGCTGCACTGCTTGCCCCGTGCAAGCCATGGTTTGAAAACCAACCAGCTC
CGAACGAAAAAGCAGATATCGTGTTTGTAGCAGGTGTGTCAACTGAGTTT
CAGATGAGTGCACGAATGCACCTTTGATGGCTCCCCAACCGAAGTAGACG
CCACCGAGGGAGTAGACGACAAACGAAGAGAAGAATCAAAAAGAATAACG
CAAACCTAGATTGCAAATAGACATGAACGAAGTCTCGCTCCTACAAAACT
GCATCAGGGGTAACACCCGCGCCACCTGCCGCAGCGTTCTTAGCGTTAGC
TGCTGCTTCTTTCTGCGCCTTCCGCTCAGCCTGCAAGGCATCCCAATCCC
TCAACGCCTTCCCTAGCCCGGGGATAAGGTGCTTGTTAAGCCTAAGAAAA
ATAGTCTTCTCAACCTTGGCGGGGAAGTGTTCGCACGTAGGTCGCTAACG
ATCAACTTGAGGGCGGAAAAATTCCTTTCCGCTTGGCAACTGGTTGCATC
AACGCCTAGGTGCAACCGCGCTATCAAGCCAACATGCGGCCAGCGGGCAG
GAGCGACAACGTTCCCCGATTTGTCGAGCCCATCAACTGCCCGCGGCTTC
CAGTACTCTAGGGCAGTGAAAGTGGGGTCGGTGTCAGTGAGAGCTGCCTC
CTTCATGTACTCGGCGTACTCCCGTTGTGCGGCAGCCCTTCGCGTCTCGC
GGACAGCAGAGCTGGCGGTATTCGGCCGGGCGATCTTTGCGTTCTGAGCC
AGCCTTATCTTTTCCATCCTAGTCAGCTGAGGCACTGGCGCCGCTGGCGC
CTCGGTGCCTGCCGCCGTCGAGCCATTGCCGCCTCCTGCCCCCCCTGCCC
CCGAGAGCGAGAGTGAAGGCGTTGCGGTACCCTGTTCCTCACTCTGCGCC
TTCGTGTACCCAAGGAAGTAGTCGAAGGCCCCCTCGACGTCGACGGCCAC
TCGCGCTTGAAGTGCTGCGCCCCGTTCAAGCACACGCTCGAGCAGCAGGA
CTTGAAGCGGGGATCGAGCACCAGGTTGATCGTCTCGGGCGACAGCGTCG
CAGACCCCAGCTCCTCTCGGACATGTCCTCCGCCATTACCGTCAGTAGTG
TCCGCGTGAGCGGTTGAAGCTGGCTCGTGGTGACTGATGTTTTGGGGCCG
TCCCAGGGATCCAGGCATCGAATGTCCTGGTCTGGGGCGCTGACCGAGTG
GTGCAGGACGAAGAAGTCGTTGATGGACTGGCCGACAAACCCATGACGAC
CCCCTGGACCTGGGCCGCCGTGGCAGCGGCGTCGTCGAGGACGCTCACCA
CCTGCTGCACTGCTTGCCACTCCGTCGGGAACAAAGCACGGTCGCTCCCA
CACCGGTTGAAGTACTCGACGAGAGCTCTGTAGAGCCTGAGCACGCGCTG
GAGCATTGCATGCAGCGAAGCCCACCTATGAACCGTTCAAAACGTGGCGG
GTGATGGGAGGCAATTTCGTTTGCAAACGAGTTAGTGCTTGCTTCGGGGG
AGGGGGGCGGAAGGGGCACGTCAGTTTGCGTGTCTAAACGAGTGACCCGG
AACGTTTGCTCCCAACTTCGTTCACCACAGGAACGACATTTTACAATTTT
TTAATTTTTTCTTTAGGGCGTGGCAACTCACGGCGATTTTGTAATAATCC
ATAAGCGAAAGCAAGTTGCTGCATACTTGGCGGGCGGCGGCGCCTGCCTC
GACCTTTCTGTTGTCCGAGACGACACGAACACACAAAATAAATCCCGAAT
ACAACCTGCGCACATCATTCGCGCACACCTCTCACCTTGTGTCGTTCCGA
CGGATGAGCTCCAAGAGCTTGCACATCTCTTCAAGCTCTTCTTGCACTTT
CTTGAACTCGTCGTTGTTGCACACACTGTGGCTGCAGTGCCCAACCATGG
CGGTGGCCTTCCCTCACAAGTTCATGGCCCAGACGGTTCTTGCACGTCCC
GCTGCCGTCCGATTTGAAAGACCCGCCGATGCCCGTTGCCCACTGCACCG
CCGAGTTCAGCCGGTGCCCAGAACAGATCAACGTGGGAACACCCATGGCC
CGGAACGCGTTGATCATGTTGCCCCCTTGGTCGACCGTGGCAGAGATGTA
GATGTTTGATGGCTCGCAGTGCTCGGCTCCTACGATACCGCCAAAAGCGT
CAACGGTAACCTGTTCACGCACGGCGAGCAGAGGTGAAGAATGTGGAGTG
CAGTTGTTTTTCTTTCAACACTCGCGACAGACACGGCCAAAAGAGAAATA
CGAAATACTAACACGCACACATCAAATCGAATACATGCACGCCGACACAG
CAGCGCTCTATCCGCTCCCTCCATTGTTGTTCGGACTCACCACCACATGA
AACCTACCCAGAGAGCAACATTATGTGTGCGCCACCAATAAACTTGCAAA
AACGAACCCGAACACGATGTTGTTGAGCCGAACACCTGACTTGTTTGTAG
CTTACCAAATGCGTGTTTTGTTTTTGGAAGGTAGAGGCAAGGACACACAG
CGTGGTGGATACATACACCAAAAACAACGTATTGAAAACAACAACAAAAA
ATCAAAGAATTACACCACAGCCCTAAAAAATAACATGGAGTGTCACCTGT
CGAAGCCATGGCTCGATCTTCTCTGCAGTATGCCTTCCGGGGAACTCCTT
CGTGCAGAACGCCACACGCTCCATACCACTGAAATCCGGCGGAATCCAGG
AGAAGCTCACGGTGAAGTACTCGCAGTTGTTCGTGCTGGTTGCGTCGCAC
TGGATGCTGATCCAGGGGCCGTTCCAGCCCGCAGCCTGGACGGACTCGTA
CTGTTCGGTGAGCTTCGCCGTCATGGCAGAACGTACATCCAAGCAGAGTT
GGTCGAGATGACCGTCGATCGTCGTCGCGTGCATTGGGTTCTGTATGTAC
GCAGGCGAAAAGCCTCGAGGTACCAGCGAAACGCGGGACTGTCGAACATG
CTGAACGGACGAAAGTCGACGGCGCACATCGCCACGTAGCGCCGGTTCTG
CTCTTCTTGTTGGGCCTTGCCAAGCGAAGTGATCATGTGTTTGTCCATCG
GCCCTTTGCCTGCGCTCGCTTGTGCTTGCTGGACTGATCCACACAAGACA
GGGAGGCGGGGAAAGGGTTGAAAGAGACAAGAGAGCGAGAGAGAACCAAC
ACGGTGTGTGGTCAGCACGGGCTTGAATTTAACACAAAATGAAAAGTGAT
ACAAGTACAGGTAGCAATGAAGTGTTAAAAAATGATAAAAAATGCACAGG
CCGCAACACATAACTACCGTGGGAAACAAAATACAAAACCGGTACAAAAT
AAACAGTAAAAATATAAAAATATTTAAGTTTATCTATATATCTGCGTTCA
ACCAAAAAACGCTAAAATCTAAAATGTGAAACAGCGTTAGGGTGTTCCAG
GAGGTTGTTGTGTACGCATAGTCCAGACTCTAACTCAAAAACGTCCAAGA
TCGGTGTTTTGAGAGCAACAAGCAAGTGAGTTTAAAAAAAACAAATGTCT
TTTGGGGGTGTTGTCTTCCGTGTGATCGGTCAAAAGTTTGAAAAGTCCAA
AGTCTACAAAAAAAAACAAAACAGCGCACAGCGTGTGCGACGCATGTGGT
ACACATCAAACTAAAGCACCACACAAATCACACCCAACCACTGCTAACGC
AGGCGATACTGCAGTAGCCCCTCACTCTTCGCACTCTTACCTCCGGCAAG
GAGGCTCGCCTTCCTCTTTTTCCCTTCGGTGCTGTGCGAGCTCTTTGGCA
TCTCTTCCTCGCGGATGTGTTTGTGCTTGTCGCGGAAGTGCTTCCACATG
CCGTTCGTCCCTCCGCTGGAGATCCCTTTGCTGGCGTCAGCTTGGACGTA
CTTCATCAAGAAGCCGCACGTCACTTCGCGTGCTGGAACGTTGTTCACCG
CGGGAAGCTTGTGTTTGACCGTGCACTTGATGTTCTTGCCACTTGTCGTG
GCTGGCGTGAACTCTACGACATGCTTCCAAATCGCAGAGGTCTGCTTGCT
TCTCCGACTGGATGGCTCTGTTGGCTGTGACACAGGCTGGGCAGCGCCGC
CGCCGGTAGGGTCCGCCATAGAGTGTGTGTTCGTGGTACTACCACGAACG
TGGTACTGTGCGTCGCCGCAACAAAAGCGGATGAAGATTCGAAAAAGGAA
AAAGGAAAAGGAAAAAGGTTCGAAAAAGGTTCGAACGTCGCAATTCGAGA
TTCTTCAATAGAACTATTTCGAAATAAAAATATTTTAGATTTTACAATTG
ATTCTTTATTCTTTGTTGGGTGTGTGTGTGTGTCTCCTGCGGGACATCGT
AGAGCATCTCGGACGGGAAGTCTTGAGCCCACAGTACACATGGGACGGGA
GTAGCTCCGTTCACAACGGGCTTGGGACGGGACTGGCTGTGCTAGTGGTG
GGACGGGACGTAGGTGGGACGGGAGCGAAATTATGTAGGTAATGTGGGAG
CAAGTGGGGCAGAAACTCACGGTGGGATGGTGCCGGGGTGGGACGGGCCG
CACGTATTTCACTGTGGGATGGGACGTCCCGTCCCATCCCGTCCCCTTTT
CAACGGGACTCCCGTCCCATTGTGTCCCGTGCAAGCCCTTGCTGTGTTGT
CTGTGGACGCATGCCATGACGCCCCACGTATGTGTCAAACAGCCTTGTCC
AACTACAAGTCGTTCCTCGCTGATATCTTAGACAAAAGTGAGAGTCGGAC
CAGCAATAGCTTCCACACAAGAAAACAATACCCCAACACCAAACAACGAC
ACCCACAACAGCGCGCTGGGCCATCCCCGCTTGCCGTATCCCTGTCGGCG
ATCAAGATGATTGTCAATACTACTCGCACTAAATTGCGTTGCCCCACCTT
CCGCGGGCATGTTATGTTCGCTATTTCCAGTCTCCGTTAACTTCTTTGTG
CCCCCCGTGCTTGGTGTGCAGCTGGTAGATCTCTGTTCGTGTCCAAATGT
GTGTATCTATCCATATATCTCTGTCTCTCTCCGTGTCTGTCTATCTATCC
ACCCATTTCTATCTCTCTTCTCTTTTTATCTGTCTCTACCAAGCGTGCGC
GTGTGATAGCCTCCCTTACTGCTGCTGTACCGTACCGCAATCTCGAGAAC
GAAGGTCATTCCTGCCGTGGTCCCTCCGCTACTTTTCGTGAACGCTTGTT
GTTCTCAGTCATTCAATGGGAAATAGAGCAGACGCGGGAAGCAGTCACAG
CAGTCACCCACCAGTTGGAGAGACCTCGTCATGACATGGCCACCATTATC
CAATGTACCATCGACGAGGGAAAGGGATTGCTGTCCCCTTTCTCGCGATA
AAAGCTCAACCAAAAAGAAGGCAAGCACCGCAGAAGGAAGTGGAGAAAAA
AACAAAAAAACTCCTGTGTTGACTTCCCCCTGTGTTGACTTCCCCCTGTG
TGACCCCAGTTGGAGCGTCGACCTACCCGAAAGGTGCAGAGTGGCGTCCA
ATTAAAGGGATGACAACACACACAAACTCTCTCTCTCTCTCTCTCCGGGT
TGCCGAGGAGAAATATTGGAATATGAAAGATTGAAATTTGCAAGATAACT
TACCGATGTAATGCTGAAGCAGCAGTCTAGCCACGTACTGACCGCCGACG
CACCAGCGTGGGTTGTGAATCAATTTCACGCGAGACAATACTCACCCAAT
GCCTTCGCTAGATATTTTGTCGTCACCGCCACCTCCCCCATGACCCAACC
TTCCCCCGACCCTCCTCCCCAATCCTCCACGCGGCCGCAGAACCAGAAGT
TCTTGAAAAATCGACTACCCCCGGGCATGGCTCCAGAACCCGGGGCAGAA
GCCAACAAGCCCCTCACCGCGGCGCAAAAAAAGAACCAAGCCCGAGCCGC
CGCGCGCAAGGCTAAGAAGGCGGCGGAGAGAGCCTCCGGGGCCGCGAGTG
TCGACAGCGACCAAGATGATGCTGGTGCCGCTGCGGCCGCGAAAGCGCTC
GGCGAGCTTAAGATTTCTGGGGCCGTGGGGGGGGGAAGAGGGGGTGCTGC
ATCTTCGGGGCCGGTGGACACGGCGAAAAAGGTGTGGCCTGCTCGCTGCG
TGCACTGCGTGCAGCTTCTGTGCGCTCGCCGCTTTGCGCTACGGCTGTAT
GCTATCGGTTTAGATCGCGAAAATGGCTCTACTTGGAAGTAAATAATCCC
GGATACCGAGCATGGCTTGGTTGAATACGCTTGGTTGAGTACTACGTATA
ATATCCCTAACTCGTAAAGTATTGTGTCTTATAAGATACCGGTCGCCCCG
GTGGTTCAGTTGGTTAATACGCGCAACCTTCTGACATTCACGCGTGCGTT
CGAATTCCAGTGCAGTAACACGATCTGGGGATTTTTCTCACATTGCGTGT
GAAAGTGGAAAGCGATCAATTCGTGAGTAAATAAAATTCGATCGTACCAT
CAACGAGGGAAAGGGATTGCCGTCCCCCTTCTCGCGATAAAAGCTCAACC
AAAAAGGCAAGTACCGCAGAGGGAAGTGGAGAAAAAAAAAAAAAACTCCT
GTGTTGACTTCCCCCTGTGTGACCCTGGTTGGAGCGTCTACCTACCCCGA
CAGGTGTAGAGTGGCGTCCAATGAAAGGGATGACAACACACACACACACA
CACCCCTAGCTCTGTGCCGGCATGTACAGAGGACGGTACACCTCCAGCTT
CCGATATGCGGGGGGGATCGTCCGTTTTGATGTCCTTCAACCCCCCAAGC
CCCCAAGTGGCACTCACGTATGTTATGTACTACACAAATAGACTATTTTT
TAGCACCACTTTAATTCCGCAGCAGCGCCGTATGACAACGATACTTCGAA
GTACATACGAGCAATGAACAGAATACGTCAAGCGTTGCGTCGTGGTATTG
CTCTAGTATGAAGGCACCGGGAGGTGTTATGTCTGTTATTTTTGTTGTTT
AAGCTCCGTCGGGTCATACACGAAACGCCCCTTACTCGGAAACATGAACA
CGCCGCCGCGGGTGGATCTCTTTGATCAAACATGGAGCTATATCCCAATG
CTGCTCCCGTCGTGGTAACCGATTTACGTGATCAGTGGGCTGACTGACGG
AATTGAAAACGCTGGCCGCTTCTGAATCGTTTTTTGTAAGGACCAGAGAT
GTGCGGCCTTTCATGCCCTCGTTGCAGGTTATCGAATACCGGCAGCGCAC
GCTAGCCCCGATTTGCCGCACACACTACACACCCCACACACGCTCGGTCG
TGCCTCCGGACACCGTACCCGTACACCACTTGCACCACTCGCTGCAGATT
AAAGCGCTCAACAAGAAGATTCGGCAGGTGGAAGAGTTGGAAGCGAAGGT
GACAGGAGGGAATGTCGTTCCCACCGACGAGCAACGACAGAAGCTGGCGA
GGAAGCCGACCCTACTAGCCGAGCTGGCGGAGGTGAGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig959:75751..84288-

>mRNA_P-littoralis_Contig959.20.2 ID=mRNA_P-littoralis_Contig959.20.2|Name=mRNA_P-littoralis_Contig959.20.2|organism=Pylaiella littoralis U1_48|type=CDS|length=714bp|location=Sequence derived from alignment at P-littoralis_Contig959:75751..84288- (Pylaiella littoralis U1_48)
GAATACGGGAAACCCCGTCGGCCACCGGGGGCGCGGGGTGCGGGAGTGCG
GTTCAATCCGAGGAAACCACCACTCTGTTCCTCTCCTGCTCTTCTTTCTC
TTTCTCTCTCGCATACACACATGGCGAGCGCCGTACCCATAGGCGCTGTT
GTCAAGGAGAACGGGGACGTGGTGATCCCCGCTACGCAACGCCCAGATGG
CACTTGGCGCAAAGAGCGACGACTGAAAGCCGGCTACGTCCCCCAGGACG
AAGTATCCAAATTCGAGTCGAAAGGAACACAGAACCAGAAGTTCTTGAAA
AATCGACTACCCCCGGGCATGGCTCCAGAACCCGGGGCAGAAGCCAACAA
GCCCCTCACCGCGGCGCAAAAAAAGAACCAAGCCCGAGCCGCCGCGCGCA
AGGCTAAGAAGGCGGCGGAGAGAGCCTCCGGGGCCGCGAGTGTCGACAGC
GACCAAGATGATGCTGGTGCCGCTGCGGCCGCGAAAGCGCTCGGCGAGCT
TAAGATTTCTGGGGCCGTGGGGGGGGGAAGAGGGGGTGCTGCATCTTCGG
GGCCGGTGGACACGGCGAAAAAGATTAAAGCGCTCAACAAGAAGATTCGG
CAGGTGGAAGAGTTGGAAGCGAAGGTGACAGGAGGGAATGTCGTTCCCAC
CGACGAGCAACGACAGAAGCTGGCGAGGAAGCCGACCCTACTAGCCGAGC
TGGCGGAGGTGAGA
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