mRNA_P-littoralis_Contig959.10.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig959.10.2
Unique NamemRNA_P-littoralis_Contig959.10.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig959.10.2 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 181 bits (459), Expect = 1.440e-50
Identity = 112/261 (42.91%), Postives = 149/261 (57.09%), Query Frame = 1
Query:   10 FQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFVQKLRAILREHARDA------------------------------IFALLYNMDQTPIQAEMPSETTLKKTGAKSACITTGGEAEKLRCTVVLTVRGDGQKVRPRIIYKGSPFV-----GADELRL-------------------YPAGGISLGVQKSSWCDGVQSDEWVTQDFMRRP--GSTPRDQRPSVLVLDDFRCHREEKFQQKLKDLANTLVVML 624
            F+ + N+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA V KLR  L   A +                               +F  L NMDQTP+Q EMP ETTL+KTGAK A I+TGG+ EK R T+VL V  DG+KV PRII+KG+PF+     G  +  L                   +PA G+S GVQ+ SW D  + + W++  +  RP  GS  + QRP +LVLDDF+CH++E +   LK  ANT+V+++
Sbjct:   27 FKVKINSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVRRAGEIYARRHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQ-QRPCILVLDDFKCHKDEGYIAALKRDANTIVIVI 285          
BLAST of mRNA_P-littoralis_Contig959.10.2 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 2.870e-50
Identity = 115/267 (43.07%), Postives = 150/267 (56.18%), Query Frame = 1
Query:   10 FQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFVQKLRAILREHARDA------------------------------IFALLYNMDQTPIQAEMPSETTLKKTGAKSACITTGGEAEKLRCTVVLTVRGDGQKVRPRIIYKGSPFV-----GADELRL-------------------YPAGGISLGVQKSSWCDGVQSDEWVTQDFMRRP--GSTPRDQRPSVLVLDDFRCHREEKFQQKLKDLANTLVVMLGWRAGP 642
            F+ +FN+WY RF KR+ FSIRR+TSVGQK P+G EG AWA V KLR  L + A +                               +F  L NMDQTP+Q E+P ETTL+KTGAK A I+TGG+ EK R T+VL V  DG+KV PRII+KG+PF      G  +  L                   +PA G+S GVQ+ SW D  + + W++  +  RP  GS  + QRP +LVLDDF+CH++E F   LK  ANT+V+ +  R  P
Sbjct:   27 FKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQ-QRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTP 291          
BLAST of mRNA_P-littoralis_Contig959.10.2 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 1.070e-46
Identity = 110/261 (42.15%), Postives = 145/261 (55.56%), Query Frame = 1
Query:   10 FQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFVQKLRAILREHARDA------------------------------IFALLYNMDQTPIQAEMPSETTLKKTGAKSACITTGGEAEKLRCTVVLTVRGDGQKVRPRIIYKGSPFVG-----------------ADELRL-------YPAGGISLGVQKSSWCDGVQSDEWVTQDFMRRP--GSTPRDQRPSVLVLDDFRCHREEKFQQKLKDLANTLVVML 624
            F+ +FN+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA V KL   L + A +                               +F  + NMDQ P+Q EMP ETTL KTGAK A I+TGG  EK R T+VL V  DG+KV PRII++G+PF+                  A E+         +PA G+S GVQ+ SW D  + + W++  +  RP  GS  + QRP +LVLDDF+CH +E F   LK  ANT+V+ +
Sbjct:  221 FKFKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLCEALVKRAGEIYARRHPPAPDESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQ-QRPRILVLDDFKCHNDEGFIAALKRDANTIVIFI 480          
BLAST of mRNA_P-littoralis_Contig959.10.2 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE)

HSP 1 Score: 173 bits (439), Expect = 3.650e-45
Identity = 111/258 (43.02%), Postives = 140/258 (54.26%), Query Frame = 1
Query:   19 RFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFVQKLRAILREHA------------------------------RDAIFALLYNMDQTPIQAEMPSETTLKKTGAKSACITTGGEAEKLRCTVVLTVRGDGQKVRPRIIYKGSPFVG--------ADELRL----------------YPAGGISLGVQKSSWCDGVQSDEWVTQDFMRRP--GSTPRDQRPSVLVLDDFRCHREEKFQQKLKDLANTLVVML 624
            +F +WY RF KR++FSIRR+TSVGQK P+G EG AWA + KLR  L E A                               D +F  L NMDQTP+Q EMP ETTL+ TGAK A I TGG+ EK R T+ L V  DG+KV  RII+KG+PFV         A + R                  P GG+S GVQ+ SWCD  +   W+   +  RP  GS  R QR  +LVLDDF+CH+++ F   LK  ANT+V+ +
Sbjct:  184 KFKSWYQRFCKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGK-EKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFI 439          
BLAST of mRNA_P-littoralis_Contig959.10.2 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 9.010e-43
Identity = 107/268 (39.93%), Postives = 141/268 (52.61%), Query Frame = 1
Query:   10 FQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFVQKLRAILREHARDA------------------------------IFALLYNMDQTPIQAEMPSETTLKKTGAKSACITTGGEAEKLRCTVVLTVRGDGQKVRPRIIYKGSPFV-----GADELRL-------------------YPAGGISLGVQKSSWCDGVQSDEWVTQDFMRRP--GSTPR-------DQRPSVLVLDDFRCHREEKFQQKLKDLANTLVVML 624
            F+ +FN+WY RF KR+ FSIRR+ SVGQK P+G+EG AWA V KLR  L + A +                               +F  L NMDQTP+Q EMP ETTL+ TG K A I+TGG+ EK R T+VL V  DG+ V P II+KG+PF+     G  +  L                   +PA G+S GVQ+ SW    + + W+   +   P  GS  R        QRP +LVLDDF+CH++E F   L   ANT+V+ +
Sbjct:  181 FKVKFNSWYQRFRKRNGFSIRRRASVGQKLPKGYEGMAWATVTKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGK-EKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFI 447          
BLAST of mRNA_P-littoralis_Contig959.10.2 vs. uniprot
Match: A0A6H5K583_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K583_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 5.770e-42
Identity = 107/261 (41.00%), Postives = 138/261 (52.87%), Query Frame = 1
Query:   10 FQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFVQKLRAILREHARDA------------------------------IFALLYNMDQTPIQAEMPSETTLKKTGAKSACITTGGEAEKLRCTVVLTVRGDGQKVRPRIIYKGSPFVG-----------------ADELRL-------YPAGGISLGVQKSSWCDGVQSDEWVTQDFMRRP--GSTPRDQRPSVLVLDDFRCHREEKFQQKLKDLANTLVVML 624
            F+ +F  WY+ F +RH FSIRR+TSVGQK P G+EG A+A + KLR  L E A +                               +F  L NMDQTP+Q EMP ETTL+K G K A I+TGG+ EK R T  L V  DG KV  RII+KG PF+                  A E+ L       YP  G+   VQ+ SWCD  +   W+++ +  RP  GS  + QR S+LVLDDFRCHR E F + L+   NT V+++
Sbjct:   96 FRTKFKNWYHCFRERHGFSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLTPAQLESVAAKVFEELGNMDQTPVQQEMPVETTLEKRGVKDARISTGGK-EKDRFTPCLAVMADGGKVPQRIIFKGKPFIPPSTAGREKNTQTRKGYIAAEVLLANRTKFGYPVSGMFFVVQEKSWCDARECTLWLSESWRFRPNHGSVIK-QRHSILVLDDFRCHRSESFVKDLRRRTNTTVILI 354          
BLAST of mRNA_P-littoralis_Contig959.10.2 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 1.030e-41
Identity = 110/275 (40.00%), Postives = 142/275 (51.64%), Query Frame = 1
Query:   10 FQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFVQKLRAILREHARDA------------------------------IFALLYNMDQTPIQAEMPSETTLKKTGAKSACITTGGEAEKLRCTVVLTVRGDGQKVRPRIIYKGSPFV-----------------------GADELRLYPAGGISLGVQ--------------KSSWCDGVQSDEWVTQDFMRRP--GSTPRDQRPSVLVLDDFRCHREEKFQQKLKDLANTLVVMLG 627
            F+ +FN+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA V KLR  L + A +                               +F  L NMDQTP+Q EMP ETTL+KTGAK A I+TGGE EK R T+VL V  DG+KV PRII+KG+PF+                        A+  R    GG    V               + SW D  + + W+   +  RP  GS  + QRP +LVLDDF+CH++E F   LK  A T++ + G
Sbjct:  209 FKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGE-EKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKVKSTLPRKNSVAWEIHSANXARSGCHGGRQNDVSPRIIFKGTPFIPPTEKSWSDQRECNGWIPGSWKLRPNNGSIVQ-QRPCILVLDDFKCHKDEGFIAALKRGAKTVIFIPG 481          
BLAST of mRNA_P-littoralis_Contig959.10.2 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 5.490e-41
Identity = 110/286 (38.46%), Postives = 139/286 (48.60%), Query Frame = 1
Query:   10 FQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFVQKLRAILREHA------------------------------RDAIFALLYNMDQTPIQAEMPSETTLKKTGAKSACITTGGEA-------------------------EKLRCTVVLTVRGDGQKVRPRIIYKGSPFVG--------ADELRL----------------YPAGGISLGVQKSSWCDGVQSDEWVTQDFMRRP--GSTPRDQRPSVLVLDDFRCHREEKFQQKLKDLANTLVVML 624
            F+ +F +WY RF KR++FSIRR+TSVG + P+G EG AWA + KLR  L E A                               D +F  L NMDQTP+Q EMP ETTL+KTGAK A I TG                            EK R T+ L V  DG KV  RII+KG+PFV         A + R                  P GG+S GVQ+ SWCD  +   W+   +  RP  GS  R QR  +LVLDDF+CH+++ F   LK  ANT+V+ +
Sbjct:  114 FKSKFKSWYQRFRKRNKFSIRRRTSVGIRLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFI 398          
BLAST of mRNA_P-littoralis_Contig959.10.2 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 1.630e-36
Identity = 98/241 (40.66%), Postives = 125/241 (51.87%), Query Frame = 1
Query:   10 FQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFVQKLRAILREHARDA------------------------------IFALLYNMDQTPIQAEMPSETTLKKTGAKSACITTGGEAEKLRCTVVLTVRGDGQKVRPRIIYKGSPFVGADELRL------------------------YPAGGISLGVQKSSWCDGVQSDEWVTQDFMRRP--GSTPRDQRPSVLVLDDFRCH 564
            F+ +F  WY+RF +RH  SIRR+TSVGQK P G+EG A+A + KLR  L E A +                               +F  L NMDQTP+Q EMP ETTL+K GAK A I+TGG+ EK R T+ L V  DG KV  RII+KG PF+     R                         YP  G+S GVQ+ SW D  +   W+++ +  RP  GS  + QR S+LVLDDFR +
Sbjct:  200 FRTKFKNWYHRFRERHGLSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLSPAQLESVATEVFEELGNMDQTPVQQEMPVETTLEKGGAKDARISTGGK-EKERFTLCLAVMADGGKVPLRIIFKGKPFIPPSTARRGKNTQPRKGSIAAEVLPANQTNFGYPVSGMSFGVQERSWYDACECTLWLSESWGFRPNHGSVIK-QRHSILVLDDFRTN 438          
BLAST of mRNA_P-littoralis_Contig959.10.2 vs. uniprot
Match: A0A6H5KKC9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKC9_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 2.290e-35
Identity = 96/242 (39.67%), Postives = 126/242 (52.07%), Query Frame = 1
Query:   64 SIRRKTSVGQKKPEGWEGKAWAFVQKLRAILREHARDA------------------------------IFALLYNMDQTPIQAEMPSETTLKKTGAKSACITTGGEAEKLRCTVVLTVRGDGQK-VRPRIIYKGSPFV-----GADELRL-------------------YPAGGISLGVQKSSWCDGVQSDEWVTQDFMRRP--GSTPRDQRPSVLVLDDFRCHREEKFQQKLKDLANTLVV 618
            SIRR+TSVGQK P+G+EG AWA V KLR  L + A +                               +F  L NMDQTP+Q EMP ETTL+KTGAK A I+TGG   +          G  QK V PRII++G+PF+     G  +  L                   +PA G+S GVQ+ SW D  + + W++  +  RP  GS  + QRP +LVLDDF+CH++E F   LK  ANT+V+
Sbjct:  108 SIRRRTSVGQKLPQGYEGMAWATVMKLREALVKRAGEIYARRHPPVPDKSPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGGQREGTLHARSGCHGGRQKNVSPRIIFQGTPFIPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQ-QRPCILVLDDFKCHKDEGFIAALKRDANTIVI 348          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig959.10.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUK2_9PHAE1.440e-5042.91DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K6L9_9PHAE2.870e-5043.07DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JHT8_9PHAE1.070e-4642.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8Y4_9PHAE3.650e-4543.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTG5_9PHAE9.010e-4339.93DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K583_9PHAE5.770e-4241.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KRZ8_9PHAE1.030e-4140.00DDE-1 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5KE45_9PHAE5.490e-4138.46DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JQM5_9PHAE1.630e-3640.66DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KKC9_9PHAE2.290e-3539.67DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig959contigP-littoralis_Contig959:33106..34720 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FXD3
Preferred namePOGK
PFAMsBrkDBD,DDE_1,HTH_Tnp_Tc5,KRAB
Model size877
Max annot lvl2759|Eukaryota
KEGG koko:K09228
Hectar predicted targeting categorymitochondrion
Exons4
Evalue3.93e-34
EggNOG OGsKOG3105@1|root,KOG3105@2759|Eukaryota
DescriptionDNA binding
Cds size876
COG categoryCH
BRITEko00000,ko03000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791872.6003506-CDS-P-littoralis_Contig959:33105..332821680791872.6003506-CDS-P-littoralis_Contig959:33105..33282Pylaiella littoralis U1_48CDSP-littoralis_Contig959 33106..33282 +
1680791872.6150901-CDS-P-littoralis_Contig959:33386..335031680791872.6150901-CDS-P-littoralis_Contig959:33386..33503Pylaiella littoralis U1_48CDSP-littoralis_Contig959 33387..33503 +
1680791872.633393-CDS-P-littoralis_Contig959:34067..341611680791872.633393-CDS-P-littoralis_Contig959:34067..34161Pylaiella littoralis U1_48CDSP-littoralis_Contig959 34068..34161 +
1680791872.6466303-CDS-P-littoralis_Contig959:34232..347201680791872.6466303-CDS-P-littoralis_Contig959:34232..34720Pylaiella littoralis U1_48CDSP-littoralis_Contig959 34233..34720 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig959.10.2prot_P-littoralis_Contig959.10.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig959 33106..34720 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig959.10.2

>prot_P-littoralis_Contig959.10.2 ID=prot_P-littoralis_Contig959.10.2|Name=mRNA_P-littoralis_Contig959.10.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=292bp
MEQFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFVQKLRA
ILREHARDAIFALLYNMDQTPIQAEMPSETTLKKTGAKSACITTGGEAEK
LRCTVVLTVRGDGQKVRPRIIYKGSPFVGADELRLYPAGGISLGVQKSSW
CDGVQSDEWVTQDFMRRPGSTPRDQRPSVLVLDDFRCHREEKFQQKLKDL
ANTLVVMLGWRAGPGVPAARPEHQQGVQARLSGQVHHLDPGQLRALGGEG
VRAEQGAGRDVGEGGVGRHLGADHSLVLQGLRSHPQPRRQRG
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mRNA from alignment at P-littoralis_Contig959:33106..34720+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig959.10.2 ID=mRNA_P-littoralis_Contig959.10.2|Name=mRNA_P-littoralis_Contig959.10.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=1615bp|location=Sequence derived from alignment at P-littoralis_Contig959:33106..34720+ (Pylaiella littoralis U1_48)
ATGGAACAATTTCAGAAGCGTTTCAACGCCTGGTACTACAGGTTCCTCAA GAGGCACCGGTTCTCGATCCGACGCAAGACGAGCGTGGGGCAGAAGAAGC CGGAAGGATGGGAGGGCAAGGCGTGGGCATTCGTCCAGAAGCTCCGGGCA ATCCTGCGTGAGCACGCGCGGGACGCCGTCATCTCGGAATGGCAGCCCTG GCAGCGAAGGTCGGAGGGACCATGGAGATCGAGATGGACACCAAGGCGAC CGCGGAGGAACTTCTGGCTGTTCAGGCCAAGATCTTCGCCCTGCTGTACA ACATGGACCAGACACCGATCCAGGCCGAGATGCCGTCGGAAACCACGCTG AAGAAGACTGGTGCGAAGAGCGCTTGCATCACGACGGGAGGTGAGGCGGT ATGATGGTACAGTAGTTGCATGGTTTAAATTAGTTCCAACCCAACACGGT GCGGAGATTTTATGCACGCGCAACAAAAGCGGGAAATTACAAAATTGCCG ACAGCGGAAATACGTGGAAATAGAATATTTTTGAATATTTTGCACTGCTT CTGCCGTCACGTGCACATGCTTCTTTTGCCTGCAAGGTACTGCTGTCACC GCCCTTCTTCACGTTTGTTGTATTTATCAGCGATTGAAAGATTCATTTAG TTGTATGCATATATTACCCTGTACTTCTTTTCGCTGTGGGCAGGTACCTG GTAAGTTTTGTACTCGAGGAGTAGGTGTGTTTTTTTATTGATTAAATTTA TAGAGAAAAGCAGGGAACTCATTTTATTACCTACGTTATCGTTTACCTAG GTAAATACGGTAGTTTACCTACGGTAGTGGCAGGCAATAATGTTTTGCAG CCAATATAAATTAAATGGTATTATTTTTGTTATTTCCCTAAGTTGTACTG TTATTCACGCGGAAATATTTTTTGTTTGAATAATTACACACCGATTTCCG CACCCGGGCAAGGAGAAGCTGCGGTGCACCGTGGTGCTAACTGTCCGGGG TGATGGACAGAAGGTGCGGCCGCGCATCATCTACAAGGGGAGCCCTTTCG TCGGGGGTACCAAGAAGTCGGGCGCGCCCAAGAAGCCTGGCAAGAACAGC ATCTCGTATGAGCACCTCCCAGAGAAGCGGACGAGCTTCGACTATACCCG GCGGGCGGCATCAGCCTCGGGGTGCAGAAGTCGTCGTGGTGCGACGGCGT TCAGTCCGATGAATGGGTCACTCAGGACTTCATGCGCCGCCCAGGGTCTA CCCCCAGGGATCAGCGTCCCAGCGTTCTCGTGCTCGACGACTTCAGGTGC CACCGGGAAGAGAAGTTCCAGCAGAAGCTCAAGGATCTGGCGAACACGCT GGTGGTGATGCTTGGTTGGAGGGCTGGCCCCGGTGTGCCAGCCGCTCGAC CGGAACATCAACAAGGAGTTCAAGCGAGGCTTTCGGGCCAGGTACACCAT CTGGATCCGGGACAACTTCGGGCGCTCGGGGGAGAAGGTGTCCGCGCCGA GCAGGGGGCTGGTCGCGACGTGGGTGAAGGAGGTGTGGGAAGGCATCTCG GAGCGGACCATTCGCTCGTGCTTCAAGGTCTGCGGTCTCACCCTCAACCT CGACGGCAGCGAGGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig959:33106..34720+

>mRNA_P-littoralis_Contig959.10.2 ID=mRNA_P-littoralis_Contig959.10.2|Name=mRNA_P-littoralis_Contig959.10.2|organism=Pylaiella littoralis U1_48|type=CDS|length=876bp|location=Sequence derived from alignment at P-littoralis_Contig959:33106..34720+ (Pylaiella littoralis U1_48)
ATGGAACAATTTCAGAAGCGTTTCAACGCCTGGTACTACAGGTTCCTCAA
GAGGCACCGGTTCTCGATCCGACGCAAGACGAGCGTGGGGCAGAAGAAGC
CGGAAGGATGGGAGGGCAAGGCGTGGGCATTCGTCCAGAAGCTCCGGGCA
ATCCTGCGTGAGCACGCGCGGGACGCCATCTTCGCCCTGCTGTACAACAT
GGACCAGACACCGATCCAGGCCGAGATGCCGTCGGAAACCACGCTGAAGA
AGACTGGTGCGAAGAGCGCTTGCATCACGACGGGAGGTGAGGCGGAGAAG
CTGCGGTGCACCGTGGTGCTAACTGTCCGGGGTGATGGACAGAAGGTGCG
GCCGCGCATCATCTACAAGGGGAGCCCTTTCGTCGGGGCGGACGAGCTTC
GACTATACCCGGCGGGCGGCATCAGCCTCGGGGTGCAGAAGTCGTCGTGG
TGCGACGGCGTTCAGTCCGATGAATGGGTCACTCAGGACTTCATGCGCCG
CCCAGGGTCTACCCCCAGGGATCAGCGTCCCAGCGTTCTCGTGCTCGACG
ACTTCAGGTGCCACCGGGAAGAGAAGTTCCAGCAGAAGCTCAAGGATCTG
GCGAACACGCTGGTGGTGATGCTTGGTTGGAGGGCTGGCCCCGGTGTGCC
AGCCGCTCGACCGGAACATCAACAAGGAGTTCAAGCGAGGCTTTCGGGCC
AGGTACACCATCTGGATCCGGGACAACTTCGGGCGCTCGGGGGAGAAGGT
GTCCGCGCCGAGCAGGGGGCTGGTCGCGACGTGGGTGAAGGAGGTGTGGG
AAGGCATCTCGGAGCGGACCATTCGCTCGTGCTTCAAGGTCTGCGGTCTC
ACCCTCAACCTCGACGGCAGCGAGGA
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