prot_P-littoralis_Contig122.9.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig122.9.2
Unique Nameprot_P-littoralis_Contig122.9.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length379
Homology
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BLAST of mRNA_P-littoralis_Contig122.9.2 vs. uniprot
Match: A0A6H5L2W2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2W2_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 5.240e-31
Identity = 86/239 (35.98%), Postives = 131/239 (54.81%), Query Frame = 0 
Query:    2 DAGFRHRSKAAQGASVIQSVELKELSAKGRRTEVHDLVSVCRRCSGTVPLAMHCAFAREGKRCFLHGTEDEWAAEV----AAGGERAKAAVRL---NCYSSGAIRFPLAAQLAEAIGARLICLRTLLEGFWVSRISHDQDAQIGKLYK-IMYWARECLDRSHIAKNLKKNMAKYAKGNGDRTTRNFANAAVRSRQVWLDTGGEGNEYVWAEAFIEMFHHLAFHLQGNHEFCSAECKGAD 232
            D  +R+R+  A   +V+ S++L+E + +G R  V  +V+  R    ++ +   C  +R+G RC +HG   ++         A     +AA RL   NCYS   +  P +A   E++G +++ L  LLEG+  +  +HDQD  +G L + +   A ECLDRSH+ KNL K + K+  G   R +RNFA     SR+   +   E      AEAF+E F HL FHL+GNH++CS EC GA+
Sbjct:  691 DGSYRNRNHTAHSINVVCSLKLREQNNRGLRDAVFGMVTFGRHVGKSLQIDPVCVTSRQG-RCPVHGDAQDFKERAHPPATASASVREAAQRLRNSNCYSGTCLTSPHSAPGTESVGVQVLLLTQLLEGWLPTMFAHDQDVGLGLLVRQVTNDAWECLDRSHVQKNLVKAIVKFLPGFAPRVSRNFAYCVAASRKE--EEKCEDGSTSRAEAFVEGFAHLVFHLKGNHQYCSPECSGAE 926
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BLAST of mRNA_P-littoralis_Contig122.9.2 vs. uniprot
Match: A0A6H5KX32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX32_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 5.350e-29
Identity = 67/97 (69.07%), Postives = 79/97 (81.44%), Query Frame = 0 
Query:   13 QGASVIQSVELKELSAKGRRTEVHDLVSVCRRCSGTVPLAMHCAFAREGKRCFLHGTEDEWAAEVAAGGERAKAAVRLNCYSSGAIRFPLAAQLAEA 109
            QGASVIQSVELK+L+  GRRT V +LVS+CRRCS  V L +HCA AR+G+RCFLHGTE+E  A+VA GG   + A+RLN YSSGAIRFPLAAQ A+A
Sbjct:   10 QGASVIQSVELKDLNENGRRTVVQNLVSICRRCSEKVHLGLHCALARDGERCFLHGTENERKAKVAKGGTVKEEALRLNYYSSGAIRFPLAAQTADA 106
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig122.9.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L2W2_9PHAE5.240e-3135.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KX32_9PHAE5.350e-2969.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 239..378
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 296..325

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig122contigP-littoralis_Contig122:40996..42460 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig122.9.2mRNA_P-littoralis_Contig122.9.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig122 36012..51488 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig122.9.2 ID=prot_P-littoralis_Contig122.9.2|Name=mRNA_P-littoralis_Contig122.9.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=379bp
MDAGFRHRSKAAQGASVIQSVELKELSAKGRRTEVHDLVSVCRRCSGTVP
LAMHCAFAREGKRCFLHGTEDEWAAEVAAGGERAKAAVRLNCYSSGAIRF
PLAAQLAEAIGARLICLRTLLEGFWVSRISHDQDAQIGKLYKIMYWAREC
LDRSHIAKNLKKNMAKYAKGNGDRTTRNFANAAVRSRQVWLDTGGEGNEY
VWAEAFIEMFHHLAFHLQGNHEFCSAECKGADDFTLADGDPDGEMLDDAP
AGGPDIFAEATGGGGDNDEGEEYAVVTASSPGARGEAPLTGEGGDGAPEG
REESPSAREDGDGAPREREEASPVGEGSDDDSGEGLGNVGGGTEESPGQA
SGAAQGGGGRSRRRHAGQGYPKSEPGKV*
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