prot_P-littoralis_Contig95.89.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig95.89.1
Unique Nameprot_P-littoralis_Contig95.89.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length279
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig95.89.1 vs. uniprot
Match: D8LIF5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIF5_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 1.430e-10
Identity = 74/211 (35.07%), Postives = 92/211 (43.60%), Query Frame = 0 
Query:    3 QGYEAAQERLKDAAQLIRTLREALASR---------------------------------DADANAAVDRARKFQREASDLRRRLETSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGLKSEVERLKLELQGQREACVAATSEGDELKATVREVGEQLRDVDDL---RQGGLAADNARAN 177
            QGYEAAQ RL+DAAQLIRTLREAL SR                                 DADANAA +RARK+QREA DLRRRLETS                                                             L  +VERL+ +L+ QREA  AA +E + L  T++++ +Q   V +L   R+G  AAD+A+AN
Sbjct:   95 QGYEAAQARLRDAAQLIRTLREALESRGEFRGDSHVAARAQPDAIAGVFGTTGLPWMPTWDADANAAANRARKYQREADDLRRRLETSGGNVSRASKGGSGGGRVGENQTSSSPLGGEQGHGRELGIRFVDDDRARQHQQHVE------LSKDVERLEQKLREQREATTAARTEANGLHETLKQL-QQSHHVGNLSSQREG--AADDAKAN 296
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig95.89.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LIF5_ECTSI1.430e-1035.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 179..210
NoneNo IPR availableCOILSCoilCoilcoord: 109..143
NoneNo IPR availableCOILSCoilCoilcoord: 5..25
NoneNo IPR availableCOILSCoilCoilcoord: 33..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..208
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..229
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig95contigP-littoralis_Contig95:340424..374585 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig95.89.1mRNA_P-littoralis_Contig95.89.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig95 340402..375115 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig95.89.1 ID=prot_P-littoralis_Contig95.89.1|Name=mRNA_P-littoralis_Contig95.89.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=279bp
MLQGYEAAQERLKDAAQLIRTLREALASRDADANAAVDRARKFQREASDL
RRRLETSSSIVGNNSSRGVTPAGGGRGEENTMRSSAVAGGGVGRGGGGGS
GGGGGGGDYVDQQQQQRGLKSEVERLKLELQGQREACVAATSEGDELKAT
VREVGEQLRDVDDLRQGGLAADNARANAAAELARELARARSTAESSRAEA
KRLRRQLQQAKPSESGGDGRGSGSCDGGGGGGGSLHRIVMPRCASCSANL
GRTGPRRRFGYSISAPVQCCRPLPCVSA*
back to top