mRNA_P-littoralis_Contig942.1.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig942.1.1 vs. uniprot
Match: A0A6H5JSZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSZ3_9PHAE) HSP 1 Score: 343 bits (880), Expect = 5.890e-116 Identity = 170/264 (64.39%), Postives = 204/264 (77.27%), Query Frame = 1
Query: 1 MEQRWIEWTDRHQHLPLSMALLGCSSFYEGKWAGSEKAFEHAVGQEFARALLVVLWPDAYQNVEWVRWDKEHDFREILANDLATAPTQREKDELTLGMFSKLNNETEFRQEVKRYAASARGKAEVVNDDNDKDNPSPRASSFPLLWTFPLLYEWSCHLFFFAPIHQQLVESVFSKYDTCTKPCDSREIDIVCLGQFSSAQSRKIQRAHASNSEIRQAGAKAIKVARELSKAASTAVPCERQLRKRSHDVTAFLKGVNDDARFGS 792
M RW W D HQHLP SMA L CSSF+EGKWAGSEKAFEHAVGQE+ARA L+ LWP+ Y+ EWV WD+EH++ EIL +DL+ A T EKDELT GMFSKLN EFR EV+RYA SAR K E+V DD D +N +PR S F ++W+FPLLYEW+CH FAPIHQQLVES FS +DTCT+ DSREIDIV LGQF S+ SR++QR +A+N EIRQAG KAI VAREL K+A+ A+P ERQLRKR+HD FL+ ++ ++ GS
Sbjct: 1 MIARWTIWMDMHQHLPYSMARLACSSFFEGKWAGSEKAFEHAVGQEYARASLLALWPELYEGAEWVGWDEEHEYLEILRDDLSEAETTEEKDELTFGMFSKLNASAEFRGEVERYALSAREKKEIVVDD-DAENQAPRVSGFDMIWSFPLLYEWACHAILFAPIHQQLVESDFSTFDTCTQKHDSREIDIVRLGQFRSSHSRRVQRLYATNKEIRQAGDKAIAVARELKKSAAHAIPNERQLRKRTHDTKQFLRDQSEKSKHGS 263
BLAST of mRNA_P-littoralis_Contig942.1.1 vs. uniprot
Match: A0A6H5JU73_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU73_9PHAE) HSP 1 Score: 327 bits (838), Expect = 3.740e-103 Identity = 163/274 (59.49%), Postives = 203/274 (74.09%), Query Frame = 1
Query: 1 MEQRWIEWTDRHQHLPLSMALLGCSSFYEGKWAGSEKAFEHAVGQEFARALLVVLWPDAYQNVEWVRWDKEHDFREILANDLATAPTQREKDELTLGMFSKLNNETEFRQEVKRYAASARGKAEVVNDDNDKDNPSPRASSFPLLWTFPLLYEWSCHLFFFAPIHQQLVESVFSKYDTCTKPCDSREIDIVCLGQFSSAQSRKIQRAHASNSEIRQAGAKAIKVARELSKAASTAVPCERQLRKRSHDVTAFLKGVNDDARFGSEWLFAGIAEE 822
M RW +W D HQHLP SMA L CSSF+EGKWAGSEKA EHAVGQE+ARA L+ LWP+ + EWV WD+EH++ EIL +DL+ A T EKDELT GMFSKLN EFR EV+RY+ SAR K E+V DD D ++ +PR S F ++W+FPLLYEW+ H FAPIHQQLV+SV S YDTCT+ DSREI IV LGQF S+QSR++QR HA+N EIR+AG K I VAREL K+A+ A+P + QLRKR D FL+ ++ ++ GS W+ + +E
Sbjct: 497 MIARWTKWMDMHQHLPYSMARLACSSFFEGKWAGSEKAIEHAVGQEYARASLLALWPELNEGAEWVGWDEEHEYLEILRDDLSEAETTEEKDELTFGMFSKLNASAEFRGEVERYSLSAREKKEIVVDD-DAESQAPRVSGFDMIWSFPLLYEWARHAILFAPIHQQLVKSVCSTYDTCTQKHDSREIGIVRLGQFRSSQSRRVQRLHATNKEIREAGDKVIAVARELKKSAAQAIPNDWQLRKRVLDTKQFLRDQSEKSKHGSNWVVRSVLKE 769
BLAST of mRNA_P-littoralis_Contig942.1.1 vs. uniprot
Match: D7FXZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXZ1_ECTSI) HSP 1 Score: 303 bits (777), Expect = 5.410e-100 Identity = 164/283 (57.95%), Postives = 200/283 (70.67%), Query Frame = 1
Query: 28 DRHQHLP-LSMALLGCSSFYEGKWAGSEKAFEHAVGQEFARALLVVLWPDAYQNVEWVRWDKEHDFREILANDLATAPTQREKDELTLGMFSKLNNETEFRQEVKRYAASARGKAEVVNDDNDKDNPSPRASSFPLLWTFPLLYEWSCHLFFFAPIHQQLVESVFSKYDTCTKPCDSREIDIVCLGQFSSAQSRKIQRAHASNSEIRQAGAKAIKVARELSKAASTAVPCERQLRKRSHDVTAFLKGVNDDARFGSEWLFAGIAEESESEKSAKSDDLSESSG 873
DRH P L + YEGKWAG++KA EHAVG+EFARALLV LWP+ ++ EW W +EHD IL DL+ A T EKD+LT GM+++LN EFR+EV+ YAASA K EVV+DD D DNP PR S+F ++W FPLLYEW+ H F A IH+QLV SVFSKYDTCT+ DSREIDIV LGQF SAQSR+I++ HASN EIR+AG KAI AR L KAAS AVP ERQ RKR HDVT F++ + A++G W + + SESE ++SD +E SG
Sbjct: 2 DRHASAPPLQHGQVSLQLLYEGKWAGADKANEHAVGKEFARALLVALWPEKNESAEWREWQEEHDILGILEGDLSEATTPGEKDKLTFGMYTELNESAEFRKEVEVYAASAHEKKEVVSDDLDVDNPPPRVSAFGMIWNFPLLYEWARHAIFLAVIHEQLVGSVFSKYDTCTQQHDSREIDIVRLGQFRSAQSRRIRKLHASNHEIREAGNKAIAEARALRKAASEAVPNERQQRKRGHDVTQFVRTATNKAKYGPGWQVRSVLDMSESE--SESDVSAELSG 282
BLAST of mRNA_P-littoralis_Contig942.1.1 vs. uniprot
Match: A0A6H5JN38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN38_9PHAE) HSP 1 Score: 271 bits (693), Expect = 2.720e-85 Identity = 153/284 (53.87%), Postives = 192/284 (67.61%), Query Frame = 1
Query: 49 LSMALLGCSSFYEGKWAGSEKAFEHAVGQEFARALLVVLWPDAYQNVEWVRWDKEHDFREILANDLATAPTQREKDELTLGMFSKLNNETEFRQEVKRYAASARGKAEVVNDDNDKDNPSPRASSFPLLWTFPLLYEWSCHLFFFAPIHQQLVESVFSKYDTCTKPCDSREIDIVCLGQFSSAQSRKIQRAHASNSEIRQAGAKAIKVARELSKAASTAVPCERQLRKRSHDVTAFLKGVNDDARFGSEWLFAGIAEE----SESEKSAKSDDLS----ESSGD 876
+SM L CSSFYEGKWAGSE+ FEHAVGQE ARALL+ WP+ Y++ EW W++++ FRE ++LTLGMFSKL EFR+E++RYAASA K +VV+D D +N +PR S F ++WTFP LYEW+CH FFAPIHQQLVES S YDT T+ DSRE+DIV LGQFSS SR+++R +SN EIR G KAI VA L K+AS AVP ERQLR HD FLK ++ ++ GS+W+ + EE SE +S S++LS E SGD
Sbjct: 163 MSMTRLACSSFYEGKWAGSEEGFEHAVGQEVARALLLAFWPNRYESTEWKGWEEQNTFRE---------------NKLTLGMFSKLAASAEFREELERYAASAHEKKKVVSDV-DVENQTPRVSGFDMIWTFPQLYEWACHAVFFAPIHQQLVESSSSTYDTGTQKHDSRELDIVRLGQFSSRGSRRVERLDSSNQEIRDEGDKAIAVATVLKKSASHAVPNERQLRNGEHDWRKFLKDKSEKSKHGSKWVVKSVMEEVLSSSEESESEASENLSCTSEEESGD 430
BLAST of mRNA_P-littoralis_Contig942.1.1 vs. uniprot
Match: D7FIQ1_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ1_ECTSI) HSP 1 Score: 186 bits (472), Expect = 9.110e-52 Identity = 107/245 (43.67%), Postives = 146/245 (59.59%), Query Frame = 1
Query: 4 EQRWIEWTDRHQHLPLSMALLGCSSFYEGKWAGSEKAFEHAVGQEFARALLVVLWPDAYQNVEWVRWDKEHDFREILANDLATAPTQREKDELTLGMFSKLNNETEFRQEVKRYAASARGKAEVVNDDNDKDNPSPRASS-FPLLWTFPLLYEWSCHLFFFAPIHQQLVESVFSKYDTCTKPCDSREIDIVCLGQFSSAQSRKIQRAHASNSEIRQAGAKAIKVARELSKAASTAVPCERQLRKR 735
+QRWI+W +RHQ LPLSMA +GC SF+ E A E AVG EFARA L V W Y+ R ++E ++R L DL R KDELT G+FS+++++ R E+++YA S G EV D +P+ +S L+ FPLLY+ CH F+F PIHQQL+E+ FSK+D+C + D E+DIV +G + SA+SR I A A+ +IR AG K ++ ARE + P E RKR
Sbjct: 227 KQRWIKWMERHQQLPLSMARIGCPSFFARTGIMGEGAVEQAVGPEFARAFLHVAWSALYEGEP--RTEREREYRTQLVKDLGGTTDARRKDELTFGLFSRIDSDRSVRNELEQYANSGWGDKEV-------DQGAPKGTSALARLFDFPLLYKLVCHRFYFVPIHQQLIEAFFSKFDSCAQKTDMAEMDIVRVGGWKSAESRDIVCADATGEKIRAAGKKVLEKAREAKAVSHARKPAENLSRKR 462
BLAST of mRNA_P-littoralis_Contig942.1.1 vs. uniprot
Match: A0A6H5JI13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI13_9PHAE) HSP 1 Score: 170 bits (431), Expect = 4.610e-46 Identity = 100/227 (44.05%), Postives = 132/227 (58.15%), Query Frame = 1
Query: 4 EQRWIEWTDRHQHLPLSMALLGCSSFYEGKWAGSEKAFEHAVGQEFARALLVVLWPDAYQNVEWVRWDKEHDFREILANDLATAPTQREKDELTLGMFSKLNNETEFRQEVKRYAASARGKAEVVNDDNDKDNPSPRASS-FPLLWTFPLLYEWSCHLFFFAPIHQQLVESVFSKYDTCTKPCDSREIDIVCLGQFSSAQSRKIQRAHASNSEIRQAGAKAIKVARE 681
++RWI+ RHQ LPLSMA +GC SFY A E AVG EFARA V WP Y+ R ++E +R LA DL R KDELTLG+FS ++ + R E+++YA S G E+ D +P+ +S L+ PLLY CH F+F PIHQQL+E+ FSKYD+C K D E+D+V +G + SA+SR I A + +IR AG K +K A E
Sbjct: 228 KKRWIKSMQRHQELPLSMARIGCPSFYARTGIMGGGAVEQAVGPEFARAFPHVAWPGLYEGEP--RTERERQYRTQLAKDLGGTTEARRKDELTLGLFSCIDGDLSVRSELEQYANSGWGDKEI-------DESAPKGTSALARLFDLPLLYRLVCHRFYFVPIHQQLIEAFFSKYDSCAKKTDMAEMDVVRVGGWKSAESRDIVCVDAIDDQIRGAGKKVLKEATE 445
BLAST of mRNA_P-littoralis_Contig942.1.1 vs. uniprot
Match: A0A6H5KR45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR45_9PHAE) HSP 1 Score: 147 bits (372), Expect = 2.950e-38 Identity = 83/193 (43.01%), Postives = 108/193 (55.96%), Query Frame = 1
Query: 10 RWIEWTDRHQHLPLSMALLGCSSFYEGKWAGSEKAFEHAVGQEFARALLVVLWPDAYQNVEWVRWDKEHDFREILANDLATAPTQREKDELTLGMFSKLNNETEFRQEVKRYAASARGKAEVVNDDNDKDNPSPRASSFPLLWTFPLLYEWSCHLFFFAPIHQQLVESVFSKYDTCTKPCDSREIDIVCLGQF 588
RW +W RHQ LPLSMA +GC SFY + A E AVG E+ARA L V WP+ Y+ R ++E ++R L D R KDELT G+FS + + E R EV+ YA S G EV D++ + L FP LY++ C F+F PIHQQL+E+ FSKYDTC K D +D V +G +
Sbjct: 180 RWKKWMQRHQELPLSMARIGCPSFYARMGIMGKGAVEQAVGPEYARAFLHVGWPERYEGEP--RSEREREYRVQLGEDFGGVIDARRKDELTFGLFSIVEEDAEMRCEVEGYAESGFGDKEV-----DEEAEKGTTALVRLFEKFPRLYKFVCVRFYFVPIHQQLIEAFFSKYDTCAKKTDVAVMDSVRVGSW 365
BLAST of mRNA_P-littoralis_Contig942.1.1 vs. uniprot
Match: A0A6H5JMW8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMW8_9PHAE) HSP 1 Score: 144 bits (364), Expect = 9.130e-37 Identity = 79/179 (44.13%), Postives = 104/179 (58.10%), Query Frame = 1
Query: 4 EQRWIEWTDRHQHLPLSMALLGCSSFYEGKWAGSEKAFEHAVGQEFARALLVVLWPDAYQNVEWVRWDKEHDFREILANDLATAPTQREKDELTLGMFSKLNNETEFRQEVKRYAASARGKAEVVNDDNDKDNPSPRASS-FPLLWTFPLLYEWSCHLFFFAPIHQQLVESVFSKYDTC 537
++RWI+W RHQ LPLSMA +GC SFY A E AVG EFARA L V WP Y+ R ++E ++R L DL R KDELT G+FS ++ + R E+++YA S G E+ D +P+++S L FPLLY+ CH F+F PIHQQL+E+ FSK C
Sbjct: 153 KKRWIKWMQRHQELPLSMARIGCPSFYARTGIMGGGAVEQAVGPEFARAFLHVAWPGLYEGEP--RTEREREYRTQLVKDLGGTTEARRKDELTFGLFSCIDGDLSVRSELEQYANSGWGNKEI-------DESAPKSTSELARLLDFPLLYQLVCHRFYFVPIHQQLIEAFFSKNIVC 322
BLAST of mRNA_P-littoralis_Contig942.1.1 vs. uniprot
Match: A0A6H5JQF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQF6_9PHAE) HSP 1 Score: 127 bits (318), Expect = 1.610e-30 Identity = 71/167 (42.51%), Postives = 96/167 (57.49%), Query Frame = 1
Query: 4 EQRWIEWTDRHQHLPLSMALLGCSSFYEGKWAGSEKAFEHAVGQEFARALLVVLWPDAYQNVEWVRWDKEHDFREILANDLATAPTQREKDELTLGMFSKLNNETEFRQEVKRYAASARGKAEVVNDDNDKDNPSPRASS-FPLLWTFPLLYEWSCHLFFFAPIHQQ 501
++RWI+W +RHQ LPLSMA +GC SFY +E A E AVG +FARA L V WP Y R ++E +FR L R KDELT G+FS ++++ R E+++YA S EV D +P+ +S L+ +PLLY+ CH F+F PIHQQ
Sbjct: 141 KKRWIKWMERHQQLPLSMARIGCPSFYARTGIMAEGAVEQAVGPKFARAFLHVAWPGLYDGEP--RTEREREFRTQLVKYSGEITEARRKDELTFGLFSCIDSDLSVRNELEQYANSGWSDKEV-------DQGAPKGTSALACLFDYPLLYKLVCHRFYFVPIHQQ 298 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig942.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig942.1.1 >prot_P-littoralis_Contig942.1.1 ID=prot_P-littoralis_Contig942.1.1|Name=mRNA_P-littoralis_Contig942.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=295bp MEQRWIEWTDRHQHLPLSMALLGCSSFYEGKWAGSEKAFEHAVGQEFARAback to top mRNA from alignment at P-littoralis_Contig942:5882..6766- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig942.1.1 ID=mRNA_P-littoralis_Contig942.1.1|Name=mRNA_P-littoralis_Contig942.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=885bp|location=Sequence derived from alignment at P-littoralis_Contig942:5882..6766- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig942:5882..6766- >mRNA_P-littoralis_Contig942.1.1 ID=mRNA_P-littoralis_Contig942.1.1|Name=mRNA_P-littoralis_Contig942.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=885bp|location=Sequence derived from alignment at P-littoralis_Contig942:5882..6766- (Pylaiella littoralis U1_48)back to top |