mRNA_P-littoralis_Contig941.35.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig941.35.2 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE) HSP 1 Score: 557 bits (1435), Expect = 6.970e-171 Identity = 293/377 (77.72%), Postives = 327/377 (86.74%), Query Frame = 3
Query: 2172 CVDSRGGITIMAVMVVFSLCAIIALFMHLVSGEMDGARQGIVHRVTKRLPLQSIKIIVVVWQILTQFTSVANVTYPDVYQRFLNGVNVLNFDALWIPSAGCIMDVDFHDRLVVSTIGPMVALALLAATFTVAAYRNRGSETALERVRYKHMPMVLLISFLVYSSVSATVFQMFACEDLNDGKNYFRADYRIECDSSKHQGFEFFAYVMIAVYPVGIPLF*AYLLYKNRRVSGSEGDGVARETRTQVQPISDLWVPYKPGRFYDEVIECMRRNMLTGVVVFIYPNTASQVAVTSMIAFSFVVLSLYLAPYVSKWDANISLAGHVIVFTSMYTALLSKVDVSDEHDVNQEVFAGVLVAAHACMVVAIVVETGVIFCSMR 3302
CVD GGI IM V+ VF L A IAL MHLVSGEM+GAR+G++HRV KRLPLQSIKI+VVVWQILTQF+SVANVTYPDVYQRFL+GVN+LNFD LWIPSAGC+++VDFH RL+V+TIGP+VALALLA T+TVA R+ GSE AL+++R+KHM MVLLI+FLVYSSVSATVFQ FACEDL+D K Y RADYRIECDSS+HQ F+ FA +MI VYPVGIPLF YLLYK+RRV SE G R+T QVQPISDLW PYKPGRFY EVIEC+RR LTGVVVFIYPNTA+QVAVT MIAFSFVV S+ LAPYVSKWDA+ISL GHVIVFTSMYTALLSKVDVSDE +QEVFAGVLVAAHACMVVA+VVET VIF S R
Sbjct: 1382 CVDDHGGIAIMVVVGVFVLGAAIALCMHLVSGEMEGARRGVIHRVVKRLPLQSIKIVVVVWQILTQFSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVATIGPLVALALLAITYTVAKRRSSGSEAALQKIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSEDAG-KRQTSPQVQPISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTLMIAFSFVVTSVVLAPYVSKWDASISLVGHVIVFTSMYTALLSKVDVSDERADSQEVFAGVLVAAHACMVVAVVVETIVIFYSWR 1757
BLAST of mRNA_P-littoralis_Contig941.35.2 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI) HSP 1 Score: 395 bits (1015), Expect = 9.840e-115 Identity = 208/415 (50.12%), Postives = 279/415 (67.23%), Query Frame = 3
Query: 2058 GIDGITGVLPRGLRGAILLGVQQGTRDDAVFHLHGMRGCVDSRGGITIMAVMVVFSLCAIIALFMHLVSGEMDGARQGIVHRVTKRLPLQSIKIIVVVWQILTQFTSVANVTYPDVYQRFLNGVNVLNFDALWIPSAGCIMDVDFHDRLVVSTIGPMVALALLAATFTVAAYRNRGSETALERVRYKHMPMVLLISFLVYSSVSATVFQMFACEDLNDGKNYFRADYRIECDSSKHQGFEFFAYVMIAVYPVGIPLF*AYLLYKNRRVSGSEGDGVARETRTQVQPISDLWVPYKPGRFYDEVIECMRRNMLTGVVVFIYPNTASQVAVTSMIAFSFVVLSLYLAPYVSKWDANISLAGHVIVFTSMYTALLSKVDVSDEHDVNQEVFAGVLVAAHACMVVAIVVETGVIFCSMR 3302
G+ G G +G G G + F C G I + AV+ V LC A+ + +SG + R G+V R+ + +PLQS+KI++V WQILTQFTSVANVTYPDVY+RFL+G++V NFD W+ SAGCI D+DFHDRL+ ST+ P++ L LA T+ A NRG +L+ + KH+ +VLL++FL+YSSVSAT+F+ F CE+L DG NY RADY I+CDSSKH+ F+ +A M+ VY VGIP A+LL+++R V + RE + SDLW PYKP FY EVIEC RR +L GVVVFI+PNTA+Q+A+T M+AF+FV++S LAP+ SKWDA ++ GH +VF SMY ALL KVDVS E +Q V+ VLVAAHACM++A++ ET V+ S++
Sbjct: 828 GVTGRAGYCLKGYEGPYCAVCSDGYTTELAF---ACTRCSGGAGRIALAAVLAVVVLCVAFAVASYAMSGRVGDVRSGVVARLGQYIPLQSVKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAESLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVL--KDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVMTETFVLTWSLK 1237
BLAST of mRNA_P-littoralis_Contig941.35.2 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI) HSP 1 Score: 397 bits (1021), Expect = 1.080e-113 Identity = 214/418 (51.20%), Postives = 283/418 (67.70%), Query Frame = 3
Query: 2058 GIDGITGVLPRGLRGAILLGVQQGTRDDAVFHLHGMRGCVDSRGGITIMAVMVVFSLCAIIALFMHLVSGEMDGARQGIVHRVTKRLPLQSIKIIVVVWQILTQFTSVANVTYPDVYQRFLNGVNVLNFDALWIPSAGCIMDVDFHDRLVVSTIGPMVALALLAATFTVAAYRNRGSETALERVRYKHMPMVLLISFLVYSSVSATVFQMFACEDLNDGKNYFRADYRIECDSSKHQGFEFFAYVMIAVYPVGIPLF*AYLLYKNRRV-SGSEGDGVARETRTQVQPISDLWVPYKPGRFYDEVIECMRRNMLTGVVVFIYPNTASQVAVTSMIAFSFVVLSLYLAPYVSKWDANISLAGHVIVFTSMYTALLSKVDVSDEHDVNQEVFAGVLVAAHACMVVAIVVETGVIFCSMRRQ 3308
G+ G +G G G +G F R C D+ GGI + A + V L ++A+ ++ SGE +G +GIV RV + +PLQS+KI+VV WQI+TQFT+VANVTYP VYQ FLNG+ V NFD W+ SAGC++DVDFHDRL+++TIGP+ A LL T+ A +RG+ LE VR+KH+ MVLL++F VYSSVSAT+F+ FACE L DGK Y ADYRIECDSSKH+ FE +A M+ +Y GIP ++LL+++R V G E G ++ R++ SDLW PYKP FY EV+EC RR +L GVVVFIYPN+++Q+A+T ++AF+FV++S LAPY S+WD I+ GHV+V SMY ALL KVDVS E +Q VF VLV AH MVV V ET V+ ++R +
Sbjct: 1183 GVTGTSGYCLEGYEGPYCAICSEGYSAQMSFTC---RTCSDNAGGIALAAALAVVGLVLLVAVVSYVSSGERNGKGRGIVERVGRYIPLQSVKIVVVAWQIMTQFTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCVVDVDFHDRLLMATIGPIFAALLLVCTYAAAVRIHRGATETLENVRHKHVFMVLLLTFFVYSSVSATLFRTFACETLEDGKTYLLADYRIECDSSKHKRFEVYAGFMVLLYTAGIPALYSFLLFRDRDVLKGREAAG--QDLRSRATSTSDLWKPYKPSVFYYEVVECARRVLLAGVVVFIYPNSSAQIAITLIVAFTFVLISEGLAPYASRWDTWINRMGHVVVVASMYLALLLKVDVSKERSSSQGVFEAVLVVAHVVMVVVXVAETLVLALALRAE 1595
BLAST of mRNA_P-littoralis_Contig941.35.2 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI) HSP 1 Score: 391 bits (1005), Expect = 9.330e-111 Identity = 207/376 (55.05%), Postives = 269/376 (71.54%), Query Frame = 3
Query: 2172 CVDSRGGITIMAVMVVFSLCAIIALFMHLVSGEMDGARQGIVHRVTKRLPLQSIKIIVVVWQILTQFTSVANVTYPDVYQRFLNGVNVLNFDALWIPSAGCIMDVDFHDRLVVSTIGPMVALALLAATFTVAAYRNRGSETALERVRYKHMPMVLLISFLVYSSVSATVFQMFACEDLNDGKNYFRADYRIECDSSKHQGFEFFAYVMIAVYPVGIPLF*AYLLYKNRRVSGSEGDGVARETRTQVQPISDLWVPYKPGRFYDEVIECMRRNMLTGVVVFIYPNTASQVAVTSMIAFSFVVLSLYLAPYVSKWDANISLAGHVIVFTSMYTALLSKVDVSDEHDVNQEVFAGVLVAAHACMVVAIVVETGVIFCSM 3299
C DS GGI + + + V +L +A+ ++VS ++ +G V R+ + +PLQS KI+VV WQILTQFT+VANVTYPDVYQRFL+G+ V NFD W+ SAGCI+ VDFHDRL++STIGP+VAL L T+ A NRG+ L+ + +H+ MVLL++ VYSSVS+T+FQ FACE L DG+ Y RADYRI CDSSKH+ + +A VM+ VY VGIP LL+++R V + G RE +V S+LW PYKP FY EVIEC RR +L GVVVFIYPNTA Q+A+T ++AF+FVV+S LAPY S+WD +S GH +VF SMY ALL KVDVS+E +Q VF VLVAAHACM++ IV+ET V+ C++
Sbjct: 1674 CSDSAGGIILASFLAVVALLVAVAVVSYVVSDKVGEGSRGTVERLGRYIPLQSAKIVVVSWQILTQFTAVANVTYPDVYQRFLDGLGVFNFDLSWVLSAGCIVVVDFHDRLLISTIGPIVALLFLCWTYAAATRINRGATETLQVIWNRHVSMVLLLTVFVYSSVSSTLFQTFACESLADGETYLRADYRITCDSSKHKALQVYAGVMVVVYTVGIPALYGVLLFRDRDVL--KRSGADREETARVISTSELWKPYKPSVFYYEVIECGRRVLLAGVVVFIYPNTAPQIAITLLMAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIVIETVVLTCAL 2047
BLAST of mRNA_P-littoralis_Contig941.35.2 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI) HSP 1 Score: 377 bits (969), Expect = 5.400e-110 Identity = 205/380 (53.95%), Postives = 265/380 (69.74%), Query Frame = 3
Query: 2172 CVDSRGGI---TIMAVMVVFSLCAIIALFMHLVSGEMDGARQGIVHRVTKRLPLQSIKIIVVVWQILTQFTSVANVTYPDVYQRFLNGVNVLNFDALWIPSAGCIMDVDFHDRLVVSTIGPMVALALLAATFTVAAYRNRGSETALERVRYKHMPMVLLISFLVYSSVSATVFQMFACEDLNDGKNYFRADYRIECDSSKHQGFEFFAYVMIAVYPVGIPLF*AYLLYKNRRVSGSEGDGVARETRTQVQPISDLWVPYKPGRFYDEVIECMRRNMLTGVVVFIYPNTASQVAVTSMIAFSFVVLSLYLAPYVSKWDANISLAGHVIVFTSMYTALLSKVDVSDEHDVNQEVFAGVLVAAHACMVVAIVVETGVIFCSMR 3302
C + GGI T +AV+ +F++ A+++ V A G + + LPLQ++KI+VV WQI+TQFTS ANVTYPDVYQRFLNG++V NFD W+ SAGC+MD+DFHDRL++STIGP++AL LAAT+ + NRG+ L+ V +H+ MVLL+ FLVYS VS+ VFQ FAC+ L G Y RADYRIECDSSKHQGF +A MI +YPVGIP F LL ++R V + DG RE +V IS+LW PY+P +Y EVIEC RR +LTG+VVFIYPNTA+Q+A+T ++ F VLS L PY WD +S H +VF S+Y ALL KVDVS+E +Q+VF VLVAAHACM++A+VVET ++ C R
Sbjct: 624 CPNRAGGILLATALAVIGLFTVVAVVSYVAWRVDPNTGCAMAG---HLKRYLPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDG--REDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLGCPSR 998
BLAST of mRNA_P-littoralis_Contig941.35.2 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE) HSP 1 Score: 384 bits (985), Expect = 2.500e-109 Identity = 213/418 (50.96%), Postives = 282/418 (67.46%), Query Frame = 3
Query: 2058 GIDGITGVLPRGLRGAILLGVQQGTRDDAVFHLHGMRGCVDSRGGITIMAVMVVFSLCAIIALFMHLVSGEMD-GARQGIVHRVTKRLPLQSIKIIVVVWQILTQFTSVANVTYPDVYQRFLNGVNVLNFDALWIPSAGCIMDVDFHDRLVVSTIGPMVALALLAATFTVAAYRNRGSETALERVRYKHMPMVLLISFLVYSSVSATVFQMFACEDLNDGKNYFRADYRIECDSSKHQGFEFFAYVMIAVYPVGIPLF*AYLLYKNRRVSGSEGDGVARETRTQVQPISDLWVPYKPGRFYDEVIECMRRNMLTGVVVFIYPNTASQVAVTSMIAFSFVVLSLYLAPYVSKWDANISLAGHVIVFTSMYTALLSKVDVSDEHDVNQEVFAGVLVAAHACMVVAIVVETGVIFCSMRRQ 3308
G+ G +G G G G + F + +S GGI + V+ + + +A+ ++ SGE+ G + GIV VT+ +PLQS+KI++V WQILTQFTSVANVTYPDVYQ L+ ++V NFD W+ SAGC++D++FH RL+VSTI P+VAL LLA T+ AA NRG L + KH+ +VLL++F VYSSVS+T+F+ FAC+DL+ K+Y RADY IEC+SS+H+G + +A MI +Y VGIP A LL+K+R V E RE +V+ IS+LW PYKP FY EVIEC RR +L GVVVFIYPNTA+Q+AVT +IAF+F +LS LAPY S+WD IS GH++VF SMY ALL KVDVSDE +QEVF VLVA H CM++ ++VE V S+R +
Sbjct: 1082 GVTGASGYCEEGYEGPYCGICSDGYTEQLSFACS--KCSENSAGGIAVAVVLALLIVFLAVAVVSYVTSGEVGMGRKGGIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEKLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPD--REEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEAAVQAWSLREE 1495
BLAST of mRNA_P-littoralis_Contig941.35.2 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI) HSP 1 Score: 369 bits (948), Expect = 4.910e-107 Identity = 194/368 (52.72%), Postives = 251/368 (68.21%), Query Frame = 3
Query: 2172 CVDSRGGITIMAVMVVFSLCAIIALFMHLVSGEMDGARQGIVHRVTKRLPLQSIKIIVVVWQILTQFTSVANVTYPDVYQRFLNGVNVLNFDALWIPSAGCIMDVDFHDRLVVSTIGPMVALALLAATFTVAAYRNRGSETALERVRYKHMPMVLLISFLVYSSVSATVFQMFACEDLNDGKNYFRADYRIECDSSKHQGFEFFAYVMIAVYPVGIPLF*AYLLYKNRRVSGSEGDGVARETRTQVQPISDLWVPYKPGRFYDEVIECMRRNMLTGVVVFIYPNTASQVAVTSMIAFSFVVLSLYLAPYVSKWDANISLAGHVIVFTSMYTALLSKVDVSDEHDVNQEVFAGVLVAAHACMVVAIVVE 3275
C D G I + + V L +AL + VSGE +G +G+V R + +PLQS+KI++V WQILTQFTSVAN+ +P VYQRFL+ + + NFD W+ SAGC+ DVDFHDRL+VSTI P+V L LAA + AA + S L+RV +KH+ +VLL++FLVY+SVSA +FQ FACE+L+D KNY RADYRIECDS KH F+ +A MI +Y VGIP L+++ V D RE ++ P +DLW PY+P FY EVIEC RR +L GVVVFIYPNTA+Q+AV +IA F ++S LAPY S+WD + GH +V SMY ALL KVDVSDE +Q VF +LVAAH CMV +++E
Sbjct: 584 CSDRAGSIALGVSVSVAGLLFTVALVSYAVSGESEGRARGVVERTGRFVPLQSVKIVIVAWQILTQFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLAAVYAAAARNSHRSSEDLQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVL--RRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLE 949
BLAST of mRNA_P-littoralis_Contig941.35.2 vs. uniprot
Match: D7FRV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV1_ECTSI) HSP 1 Score: 361 bits (926), Expect = 8.430e-104 Identity = 180/357 (50.42%), Postives = 255/357 (71.43%), Query Frame = 3
Query: 2241 ALFMHLVSGEMDGARQG-IVHRVTKRLPLQSIKIIVVVWQILTQFTSVANVTYPDVYQRFLNGVNVLNFDALWIPSAGCIMDVDFHDRLVVSTIGPMVALALLAATFTVAAYRNRGSETALERVRYKHMPMVLLISFLVYSSVSATVFQMFACEDLNDGKNYFRADYRIECDSSKHQGFEFFAYVMIAVYPVGIPLF*AYLLYKNRRVSGSEGDGVARETRTQVQPISDLWVPYKPGRFYDEVIECMRRNMLTGVVVFIYPNTASQVAVTSMIAFSFVVLSLYLAPYVSKWDANISLAGHVIVFTSMYTALLSKVDVSDEHDVNQEVFAGVLVAAHACMVVAIVVETGVIFCSMRRQ 3308
AL +LVS E +G ++ V ++ +S+KI+VVVWQILTQF+ VANVTYP +YQRFL+ ++VLNFD W+ SAGC++D DFHD L+ +TIGP++ + +L AT+ A+YRNRGS+ A+ RV KH+ VLL++FLVYSSVS+TVF+MF C+ L D +Y RADY I+C S+KH+ + FA M+ +YPVGIPLF LLY R DG R+ Q + IS LW PY P R+Y+EV+EC RR +LTGVVVFIYPN+A+Q+A++ ++ F+F+V+S LAP+ S WD +S GH+++F +M+ ALL KVDVSDE + +Q +FAG+LV + + A V E ++C+++ +
Sbjct: 673 ALVAYLVSNEREGXXXXXLIVLVKDKVSFRSLKIVVVVWQILTQFSDVANVTYPHIYQRFLDVIDVLNFDIGWVISAGCVVDFDFHDHLLTATIGPIIVVGVLGATYAAASYRNRGSDEAIARVFRKHVSAVLLVTFLVYSSVSSTVFRMFVCDPLADSNSYLRADYSIQCSSTKHRALQIFAVFMVLLYPVGIPLFYGILLYNTREALK---DGSCRQAHPQAKTISALWEPYTPKRYYNEVVECGRRMLLTGVVVFIYPNSAAQIAISLLMTFAFLVISEVLAPFASAWDCWVSRCGHILIFVTMFVALLLKVDVSDEREGSQRLFAGILVVTNLVLFGAAVAEMVWMWCAVKME 1026
BLAST of mRNA_P-littoralis_Contig941.35.2 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI) HSP 1 Score: 367 bits (941), Expect = 1.020e-103 Identity = 190/372 (51.08%), Postives = 260/372 (69.89%), Query Frame = 3
Query: 2172 CVDSRGGITIMAVMVVFSLCAIIALFMHLVSGEMDGARQGIVHRVTKRLPLQSIKIIVVVWQILTQFTSVANVTYPDVYQRFLNGVNVLNFDALWIPSAGCIMDVDFHDRLVVSTIGPMVALALLAATFTVAAYRNRGSETALERVRYKHMPMVLLISFLVYSSVSATVFQMFACEDLNDGKNYFRADYRIECDSSKHQGFEFFAYVMIAVYPVGIPLF*AYLLYKNRRVSGSEGDGVARETRTQVQPISDLWVPYKPGRFYDEVIECMRRNMLTGVVVFIYPNTASQVAVTSMIAFSFVVLSLYLAPYVSKWDANISLAGHVIVFTSMYTALLSKVDVSDEHDVNQEVFAGVLVAAHACMVVAIVVETGVI 3287
C GGI M V +L + + M+++SGE R ++ R+ +PLQS+KI++V WQILTQF S ANV YP VYQ+FL+G+ V FD W+ SAGC++D+ FH RL+ +TIGP+ A+ LLA T+ A NR + L + KH+ + LL++FLVYSSVS+T+F+ FAC++L DGKNY R DYRIECDSSKH+ F+ +A MI +YP+GIP+ + LL+K+R V + D R+ +V+ S+LW PYKP FY EVIEC RR +LTG+VVFIYPNTA+Q+A+T M+AF F +LS ++PY S+W+ ++ GHV+V SMY ALL KVDVSDE +Q VF VLV HACM++++VVET V+
Sbjct: 1034 CFSRSGGIVFAVGMAVLALFVAVVVIMYIMSGEAGERRMYVLERLGWYVPLQSVKIVIVSWQILTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVL--KKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVV 1403
BLAST of mRNA_P-littoralis_Contig941.35.2 vs. uniprot
Match: D8LIY0_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY0_ECTSI) HSP 1 Score: 362 bits (929), Expect = 2.140e-102 Identity = 194/375 (51.73%), Postives = 254/375 (67.73%), Query Frame = 3
Query: 2058 GIDGITGVLPRGLRGAILLGVQQGTRDDAVFHLHGMRGCVDSRGGITIMAVMVVFSLCAIIALFMHLVSGEMDGARQGIVHRVTKRLPLQSIKIIVVVWQILTQFTSVANVTYPDVYQRFLNGVNVLNFDALWIPSAGCIMDVDFHDRLVVSTIGPMVALALLAATFTVAAYRNRGS-ETALERVRYKHMPMVLLISFLVYSSVSATVFQMFACEDLNDGKNYFRADYRIECDSSKHQGFEFFAYVMIAVYPVGIPLF*AYLLYKNRRVSGSEGDGVARETRTQVQPISDLWVPYKPGRFYDEVIECMRRNMLTGVVVFIYPNTASQVAVTSMIAFSFVVLSLYLAPYVSKWDANISLAGHVIVFTSMYTALLSK 3179
G+ G G G +G G F R C DS GGI + + V + A + + ++ SG+ +G QGIV RV +PLQS+KI+VV WQ++TQFT VAN+TYPDVYQ FL+G+ + NFD WI SAGC+ DVDFHDRL++STIGP++A+ +LA T+ A +RG+ +T L+ V KH+ +VLL+SF VYSSVS+T+F+ FACE L DGKNY RADYRIECDSS+H+GFE +A +M+ VY VGIP +LLY++R E D ++V SDLW PY+P FY EVIEC RR +L GVVVFIYPN+ +Q+A+T +IAF FV++S L+PY S+WD IS GHV+V TSMY ALL K
Sbjct: 992 GVTGTAGYCLEGYQGPYCAVCSHGFSAQFGFTC---RECSDSAGGIVLAVALAVAGIFAAVVVVSYVTSGKRNGRGQGIVERVALYIPLQSVKIVVVAWQVVTQFTVVANITYPDVYQTFLDGLKLFNFDLGWILSAGCVTDVDFHDRLLMSTIGPIIAVMVLACTYAAATRIHRGATDTTLQNVWDKHVLVVLLLSFFVYSSVSSTLFRTFACETLGDGKNYLRADYRIECDSSRHKGFEVYAGIMMLVYTVGIPGLYGFLLYRDRDFL-KERDTCQEPPPSRVTSTSDLWKPYRPSVFYYEVIECGRRVLLAGVVVFIYPNSGAQIAITLVIAFVFVLISESLSPYASRWDTWISRTGHVVVVTSMYVALLLK 1362 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig941.35.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig941.35.2 >prot_P-littoralis_Contig941.35.2 ID=prot_P-littoralis_Contig941.35.2|Name=mRNA_P-littoralis_Contig941.35.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=545bp MSWSAVTSFSNNSASYGAALAVLHASSVSWSGETTFTSNNAKSDGGALAVback to top mRNA from alignment at P-littoralis_Contig941:66908..71229- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig941.35.2 ID=mRNA_P-littoralis_Contig941.35.2|Name=mRNA_P-littoralis_Contig941.35.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=4322bp|location=Sequence derived from alignment at P-littoralis_Contig941:66908..71229- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig941:66908..71229- >mRNA_P-littoralis_Contig941.35.2 ID=mRNA_P-littoralis_Contig941.35.2|Name=mRNA_P-littoralis_Contig941.35.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1635bp|location=Sequence derived from alignment at P-littoralis_Contig941:66908..71229- (Pylaiella littoralis U1_48)back to top |