prot_P-littoralis_Contig941.27.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig941.27.1
Unique Nameprot_P-littoralis_Contig941.27.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length369
Homology
BLAST of mRNA_P-littoralis_Contig941.27.1 vs. uniprot
Match: A0A6H5KUR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUR8_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 1.410e-23
Identity = 88/186 (47.31%), Postives = 105/186 (56.45%), Query Frame = 0
Query:   94 GEGASGGRGQAKATNLDLLATAACSAGAMASDGGSAGGSRSGG-----IHDHEVS------DVSQELAAAQVTGTQPGEAVAAPASAQAVVET-----------PVPAREALVKGDGAVQAAGEAGAGEVTPVSSALAVVAQEPGEAQRLQKSHGSHDLLGHTPAATPAPVAAGEEEQGTVVRESL 257
            G   +GG   A ++NL+LLAT       +  + GS GG  SGG      HD  V       D+SQELA  QVTGTQP EA+AAPASAQ VVET           P+PA EALV G   VQAAGEAGAG+V P  S    +AQ+ GEA R+QKS GSHD+L          V  GE EQG  + ++L
Sbjct:  503 GTAGAGGVEMASSSNLNLLATVC-----LLEENGSCGGIESGGGGDGANHDETVPIGDCAPDLSQELAVTQVTGTQPDEALAAPASAQVVVETVTPGQDTERQQPLPASEALVAGGVEVQAAGEAGAGDVMPTLSGSVGLAQQTGEAPRVQKSRGSHDVLDRI------RVDGGEVEQGEAISDAL 677          
BLAST of mRNA_P-littoralis_Contig941.27.1 vs. uniprot
Match: A0A6H5K7R7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7R7_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 1.850e-20
Identity = 85/177 (48.02%), Postives = 97/177 (54.80%), Query Frame = 0
Query:   99 GGRGQAKATNLDLLATAACSAGAMASDGGSAGGSRSGGIHDHEVS------DVSQELAAAQVTGTQPGEAVAAP-ASAQAVVET-----------PVPAREALVKGDGAVQAAGEAGAGEVTPVSSALAVVAQEPGEAQRLQKSHGSHDLLGHTPAATPAPVAAGEEEQGTVVRESL 257
            GG   A ++NL LLAT    A   +  G  +GG   G  HD  V       D SQELA  QVTGTQP EAVAA  ASAQAVVET           P+P REALV G   VQ  GEAGAG+V   SS    VAQ+ GEA R+Q+S GSHDLL          V  GE EQG  + ++L
Sbjct:  556 GGLEMASSSNLQLLATVCVRAENESYGGIESGGGGDGANHDETVPIEDGAPDFSQELAVTQVTGTQPDEAVAAASASAQAVVETATPVQDTEREQPLPPREALVAGGVEVQVVGEAGAGDVMRTSSGSVGVAQQTGEAPRVQESRGSHDLLDQI------RVYGGEVEQGEAISDAL 726          
BLAST of mRNA_P-littoralis_Contig941.27.1 vs. uniprot
Match: D8LFH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFH6_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 4.490e-20
Identity = 73/135 (54.07%), Postives = 84/135 (62.22%), Query Frame = 0
Query:  104 AKATNLDLLATAACSAGAMASDGGSAGGSRSGGIHDHEVS------DVSQELAAAQVTGTQPGEAVAAPASAQAV-VETPVPAREALVKGDGAVQAAGEAGAGEVTPVSSALAVVAQEPGEAQRLQKSHGSHDLL 231
            A ++NL+LLAT     G  +  G  +GG   G   D  V       D+SQELAA +VT TQP E VAAPASAQ    E P PA +ALV G  AVQAAGEAGA +V P S   A VA +PGEAQR+Q S GSHDLL
Sbjct:    2 ASSSNLNLLATVCLLEGNGSCGGIESGGGGDGANRDETVPIEDGALDLSQELAATRVTSTQPDEPVAAPASAQDTECEQPSPASDALVAGGVAVQAAGEAGADDVMPTSRGSAGVAIQPGEAQRVQNSRGSHDLL 136          
BLAST of mRNA_P-littoralis_Contig941.27.1 vs. uniprot
Match: A0A6H5JA48_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA48_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 7.150e-19
Identity = 71/129 (55.04%), Postives = 80/129 (62.02%), Query Frame = 0
Query:  141 EVSDVSQELAAAQVTGTQPGEAVAAP-ASAQAVVET-----------PVPAREALVKGDGAVQAAGEAGAGEVTPVSSALAVVAQEPGEAQRLQKSHGSHDLLGHTPAATPAPVAAGEEEQGTVVRESL 257
            +  D+SQELAA QVTGTQP EAVAA  AS QAVVET           P+PA EALV GD  VQAAGEAGA +V   SS    VAQ+ GEA R+Q+S GSHDLL          V  GE EQG  V ++L
Sbjct:   35 DAPDLSQELAATQVTGTQPDEAVAAASASPQAVVETATPGQDTEHEQPLPASEALVAGDVGVQAAGEAGAADVMLTSSGSVGVAQQTGEAPRVQESRGSHDLLDQI------RVYGGEVEQGEAVSDAL 157          
BLAST of mRNA_P-littoralis_Contig941.27.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 1.140e-6
Identity = 40/56 (71.43%), Postives = 41/56 (73.21%), Query Frame = 0
Query:  142 VSDVSQELAAAQVTGTQPGEAVAAPASAQAVV-----------ETPVPAREALVKG 186
            V D+SQELAA QVTGTQP EAVAAPASAQAVV           E PVPAREALVKG
Sbjct: 2003 VPDLSQELAATQVTGTQPDEAVAAPASAQAVVKAVTPVTETEHEQPVPAREALVKG 2058          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig941.27.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KUR8_9PHAE1.410e-2347.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7R7_9PHAE1.850e-2048.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFH6_ECTSI4.490e-2054.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JA48_9PHAE7.150e-1955.04Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FTT9_ECTSI1.140e-671.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 327..369
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 212..281

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig941contigP-littoralis_Contig941:54369..55923 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig941.27.1mRNA_P-littoralis_Contig941.27.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig941 54369..55923 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig941.27.1 ID=prot_P-littoralis_Contig941.27.1|Name=mRNA_P-littoralis_Contig941.27.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=369bp
SVVDDTVPSFAATGGEGDEREEVTTTVAQLAAARVEKEGEGERPESAVNT
AAVAGEVGRGERAPATDTFRAPTVAVPPATSPAPPPVAPQGVGGEGASGG
RGQAKATNLDLLATAACSAGAMASDGGSAGGSRSGGIHDHEVSDVSQELA
AAQVTGTQPGEAVAAPASAQAVVETPVPAREALVKGDGAVQAAGEAGAGE
VTPVSSALAVVAQEPGEAQRLQKSHGSHDLLGHTPAATPAPVAAGEEEQG
TVVRESLGSVVSTAPATPAPAAAREKQEEVVSEALAAAPQGVECFSRSGG
GEGTGGGRGQASAATLDLLATAACLGTGAVASEGGSAGESGSGSENEGGD
QHEAAGEADAGEVMPTSSE
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