mRNA_P-littoralis_Contig94.31.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig94.31.2
Unique NamemRNA_P-littoralis_Contig94.31.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig94.31.2 vs. uniprot
Match: D7FNG9_ECTSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNG9_ECTSI)

HSP 1 Score: 378 bits (970), Expect = 2.070e-125
Identity = 217/332 (65.36%), Postives = 243/332 (73.19%), Query Frame = 2 
Query:   95 MTSLDFQSLLKQEKARQRAEFVQQNQT-AVQPHHDSVAANLRRDA--------EARVPPDGGLGRTQPSPPCFVDLVERLPLDMEKMRVGDTPSIFYVPDFISEAEEQEIRTRTYARDVDADASDEWVSLRSRRLKCWGGQPGESFRPEPLPPWVGALCDLLVVRKVFAEEDRPNHVLLNEYQPGQGIMAHTDGPFYRPRTATLSLGSDAIMHFSPRLAAADVGRPGVQSQPQASLVLRPRCLVVFADDAYSRQLHGIDAVREETVGSATGGDGSSGDTSGEDGLSGGGGGRTPVINAEAAGAPEGTVLRRKLRVSLTFRRVCADADCGRDV 1063
            MTSLDFQSLLKQEKA QR +  Q  +T AVQ                      E++V     +G  +PSP   V L  R  LDMEKMRVG+TPSIFYVPDFIS A+EQ++  R +A+     +S+EWV+LRSRRLKCWGGQPGESFRPEPLPPWV ALC+ LVVR VF+EE RPNHVLLNEYQPGQGIMAHTDGPFY PRTATLSLGSDA+MHFSPR+  + +GRPGV+++PQASLVLR   LVVFADDAYSR LH IDAVREETVG      GSSGD     G  GG GG  PVIN  AAGAPEGT+LRRKLRVSLTFRRV A AD G + 
Sbjct:    1 MTSLDFQSLLKQEKALQRVQLAQSTRTTAVQXXXXXXXXXXXXXXXXXXXXXXESKV-----VGTKEPSP-LLVKLAGRPSLDMEKMRVGNTPSIFYVPDFISGADEQQLLERIHAQ----ASSNEWVTLRSRRLKCWGGQPGESFRPEPLPPWVDALCESLVVRGVFSEETRPNHVLLNEYQPGQGIMAHTDGPFYEPRTATLSLGSDAVMHFSPRIETSRIGRPGVETRPQASLVLRALSLVVFADDAYSRLLHSIDAVREETVGCG----GSSGDVGKRGG--GGVGGGAPVINGAAAGAPEGTILRRKLRVSLTFRRVRA-ADRGEET 315
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BLAST of mRNA_P-littoralis_Contig94.31.2 vs. uniprot
Match: A0A835ZDT2_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT2_9STRA)

HSP 1 Score: 188 bits (477), Expect = 8.140e-53
Identity = 114/246 (46.34%), Postives = 140/246 (56.91%), Query Frame = 2 
Query:  311 LDMEKMRVGDTPSIFYVPDFISEAEEQEIRTRTYARDVDADASDEWVSLRSRRLKCWGGQ---PGESFRPEPLPPWVGALCDLLVVRKVFAEEDRPNHVLLNEYQPGQGIMAHTDGPFYRPRTATLSLGSDAIMHFSPR-LAAADVGRPGVQSQPQASLVLRPRCLVVFADDAYSRQLHGIDAVREETVGSATGGDGSSGDTSGEDGLSGGGGGRTPVINAEAAG-APEGTVLRRKLRVSLTFRRV 1033
            +D++  R G  PS++Y PDF++ +   EI  + YA     +    W  LR+RRL+CWGGQ    G +  P  L PW+  LC LLV   +F     PNHVL+NEYQPGQGIM HTDGP Y PRTATLSL SDA+   + R  +  D+G   V   P  +L+LR R LVVFAD AY+   HGID V EE VG     DGS              GG   V+N   AG A E  V+ R LR+SLTFR V
Sbjct:    8 VDLQSHRTGTIPSVYYNPDFVTASLADEIIKQVYAV---PEGHARWTVLRTRRLQCWGGQLQADGRAHDPSDLCPWLQQLCTLLVTCGIFPAHAPPNHVLINEYQPGQGIMPHTDGPMYYPRTATLSLMSDAVFKLAQRPRSPGDIG--SVDLSPTEALLLRNRSLVVFADAAYTDFTHGIDFVHEEAVG-----DGS--------------GGTCSVVNGPEAGVAEEEVVVERALRISLTFRHV 229
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BLAST of mRNA_P-littoralis_Contig94.31.2 vs. uniprot
Match: A0A4D9DGD1_9STRA (Fe2OG dioxygenase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DGD1_9STRA)

HSP 1 Score: 191 bits (486), Expect = 8.550e-53
Identity = 139/382 (36.39%), Postives = 180/382 (47.12%), Query Frame = 2 
Query:   95 MTSLDFQSLLKQEKARQRAEFVQQN-----------------QTAVQPHHDSVAANL--RRDA----------EARVPPDGGLG--------------------RTQPSPPCFVDLVERLPLDMEKMRVGDTPSIFYVPDFISEAEEQEIRTRTYARDVDADASDEWVSLRSRRLKCWGGQPGE---SFRPEPLPPWVGALCDLLVVRKVFAEEDRPNHVLLNEYQPGQGIMAHTDGPFYRPRTATLSLGSDAIMHFSPRLAAADVGRPGVQSQPQASLVLRPRCLVVFADDAYSRQLHGIDAVREETVGSATGGDGSSGDTSGEDGLSGGGGGRTPVINAEAAGAPEGTV-----LRRKLRVSLTFRRVCADADCGRDVDA 1069
            M +LDFQ+LL+QE+ R R E  Q N                 Q       D+   N   R DA          ++  P DG +                     R + +P           L    MR G    +FYVP++IS+  EQEI    ++  V+     +WV LR RRL+C+GG+P E   SF+ E LPPW+G +C  L++  VF EE  PNHVLLNEY+PGQGIMAH DGPFY  R A +SLG  AI  F  RL A ++     +S P  ++VL PR L+VF  +AY   LH I AV EE VG   G                     TPV+N E     EG +     L+R LR+SLT RRV  + +     DA
Sbjct:    1 MPALDFQTLLRQERNRVRHEMDQTNNKTRSGSPRAEESEEGDQHDDDDKEDTTCVNFAARVDALLDSVMASHVQSAAPEDGDMDIMVTAAAKVVEEGEQVRHCLRARLNPEYLTRATTERDLSKHAMR-GPPDGVFYVPEYISKEMEQEIMEVAHSMPVN-----QWVKLRGRRLQCFGGKPTENVRSFQSEALPPWIGQVCRTLMLAGVFDEEIIPNHVLLNEYEPGQGIMAHADGPFYHSRVAIISLGGPAIFRFKRRLIAEEISADSQESGPAGTVVLEPRSLIVFEGEAYHDYLHEIAAVEEEVVGGTEG--------------------TTPVLNLERL---EGRINVGDRLKRALRLSLTCRRVKEEGEVKDQDDA 353
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BLAST of mRNA_P-littoralis_Contig94.31.2 vs. uniprot
Match: A0A7S2G6U9_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G6U9_9STRA)

HSP 1 Score: 189 bits (479), Expect = 3.560e-50
Identity = 106/237 (44.73%), Postives = 139/237 (58.65%), Query Frame = 2 
Query:  347 SIFYVPDFISEAEEQEIRTRTYARDVDADASDEWVSLRSRRLKCWGGQPGESFRPEPLPPWVGALCDLLVVRKVFAEEDRPNHVLLNEYQPGQGIMAHTDGPFYRPRTATLSLGSDAIMHFSPRLAAADVGRPGVQSQPQASLVLRPRCLVVFADDAYSRQLHGIDAVREETVGSATGGDGSSGDTSGEDGLSGGGGGRTPVINAEAAGAPEGTVLRRK-LRVSLTFRRVCADADCG 1054
            ++ Y+P++++E EE  I  +TYA     D+   WV+LR RRL+CWGG+P      EPLPPW+  L + LV   +F  E  PNHVLLNEY+ G+GIMAHTDG FY P+TATLSLG  A+M F+PR+    VG   V  +P A +VLRPR LVVF ++AY   LH I A   + VG+A                        PV N E+AGA  G V+ R  +R+SLTFR +  +   G
Sbjct:  101 TVSYLPEWVAEDEEAAIMAQTYAV---PDSHPSWVTLRGRRLQCWGGEPRRDSAAEPLPPWLQRLSEGLVEAGIFPAEVAPNHVLLNEYKAGEGIMAHTDGDFYHPQTATLSLGGTAVMTFAPRVQPRAVGL--VDGRPVAEVVLRPRSLVVFREEAYLDHLHAIAASHSDEVGAAA-----------------------PVANLESAGARLGEVIARPAVRLSLTFRHIVRERPDG 309
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BLAST of mRNA_P-littoralis_Contig94.31.2 vs. uniprot
Match: A0A7S2G3H8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G3H8_9STRA)

HSP 1 Score: 174 bits (441), Expect = 3.160e-48
Identity = 94/201 (46.77%), Postives = 119/201 (59.20%), Query Frame = 2 
Query:  446 WVSLRSRRLKCWGGQPGE--SFRPEPLPPWVGALCDLLVVRKVFAEEDRPNHVLLNEYQPGQGIMAHTDGPFYRPRTATLSLGSDAIMHFSPRLAAADVGRPGVQSQPQASLVLRPRCLVVFADDAYSRQLHGIDAVREETVGSATGGDGSSGDTSGEDGLSGGGGGRTPVINAEAAGAPEGTVLRRK-LRVSLTFRRVCA 1039
            W+SL  RR++CWGGQP E   F PEPLPPW+  +C  LV   VF  E RPNHVL+NEY  G+GI+ H+DGP Y P+TATLSLG  AIM F PR+++ D+G   V S P   ++LRPR LVVF D AY   +H I + + + VGS                       R   IN   +GA  G +++R  +RVSLTFR V A
Sbjct:   16 WISLSGRRVQCWGGQPNERTKFVPEPLPPWLVDICTALVDAGVFPSEVRPNHVLINEYANGEGILPHSDGPMYFPKTATLSLGGSAIMTFEPRISSGDIGE--VSSDPICEVILRPRSLVVFEDAAYIDYMHAIASRQTDQVGS-----------------------RAVPINLALSGARHGEMVQRPAIRVSLTFRHVTA 191
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BLAST of mRNA_P-littoralis_Contig94.31.2 vs. uniprot
Match: A0A8K1CCV7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCV7_PYTOL)

HSP 1 Score: 152 bits (383), Expect = 4.840e-39
Identity = 92/251 (36.65%), Postives = 135/251 (53.78%), Query Frame = 2 
Query:  104 LDFQSLLKQEKARQRAEFVQQNQTAVQPHHDSVAANLRRDAEARVPPDGGLG-RTQPSPPCFVDLVERLPLDMEKMRVGDTPSIFYVPDFISEAEEQEIRTRTYARDVDADASDEWVSLRSRRLKCWGGQPGESFRPEPLPPWVGALCDLLVVRKVFAEEDRPNHVLLNEYQPGQGIMAHTDGPFYRPRTATLSLGSDAIMHFSP-RLAAADVGRPGVQSQPQASLVLRPRCLVVFADDAYSRQLHGIDAV 850
            +DF+ LL++E+ R      Q ++TA    ++  A+N  + AEA +  +   G R +P             LD+ + RV    S++YVP+++++ EE  I  R Y           WVSL+ RRL+ +GGQ    F PEPLP W+  +   LV   VF E  RPNH L+NEY  G+GIM H DGP Y P  A +S G+DA + F+P R   A+       +  + S ++R R L++F +DAY+  LH ID V
Sbjct:    1 MDFRRLLREERQRALQRKSQGDETAAPTENEESASNDEKAAEAELSNEPLTGWRIRPQ------------LDLTQFRVDGIRSVYYVPEWLTQEEEDAILGRVYGAPATM-----WVSLKRRRLQMYGGQVKAPFSPEPLPLWLTQIASGLVDAGVFVEATRPNHALINEYGVGEGIMPHEDGPAYHPMVAIISTGADARVTFAPHRKWTAETPDVPDTALTEVSFMVRRRSLLLFTEDAYTEYLHSIDGV 234
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BLAST of mRNA_P-littoralis_Contig94.31.2 vs. uniprot
Match: A0A7S0PB53_CAFRO (Hypothetical protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PB53_CAFRO)

HSP 1 Score: 150 bits (380), Expect = 6.740e-38
Identity = 94/211 (44.55%), Postives = 117/211 (55.45%), Query Frame = 2 
Query:  431 DASDEWVSLRSRRLKCWGGQPGESFR---PEPLPPWVGALCDLLVVRKVFAEEDRPNHVLLNEYQPGQGIMAHTDGPFYRPRTATLSLGSDAIMHFSPRLAAADVGRPGVQSQPQASLV----LRPRCLVVFADDAYSRQLHGIDAVREETVGSATGGDGSSGDTSGEDGLSGGGGGRTPVINAEAAGAPEGTVL-RRKLRVSLTFRRVCA 1039
            +AS  WV LR RRL  +GG P    R    EPLPPW+GA+ D LV    F E+ RPNHVL+N Y PG+GI+ HTDGP Y P TATLSLGSDA+M F+PR+ +  VG    QS  +A+      L  R LVVF+D+AY+  LH + AV E  V                             +NA + G  EG+++ R  LRVSLT R V A
Sbjct:  123 EASGRWVRLRGRRLLQFGGTPMPGPRLLGREPLPPWLGAVVDRLVATGAFPEDKRPNHVLVNAYGPGEGILPHTDGPLYFPCTATLSLGSDAVMRFAPRVPSELVGTSS-QSHLEAAKSFDAGLARRSLVVFSDEAYTSALHDVAAVGEHRV-------------------------TAKCLNAASLGWAEGSLIPRAPLRVSLTMRHVPA 307
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BLAST of mRNA_P-littoralis_Contig94.31.2 vs. uniprot
Match: K3WDT5_GLOUD (Fe2OG dioxygenase domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WDT5_GLOUD)

HSP 1 Score: 147 bits (371), Expect = 3.600e-37
Identity = 80/192 (41.67%), Postives = 110/192 (57.29%), Query Frame = 2 
Query:  299 ERLPLDMEKMRVGDTPSIFYVPDFISEAEEQEIRTRTYARDVDADASDEWVSLRSRRLKCWGGQPGESFRPEPLPPWVGALCDLLVVRKVFAEEDRPNHVLLNEYQPGQGIMAHTDGPFYRPRTATLSLGSDAIMHFSP--RLAAAD-----VGRPGVQSQPQA-SLVLRPRCLVVFADDAYSRQLHGIDAV 850
            +RL LD+E  R+G  P ++Y+P++ISEAEE  +  R YA  V  D    WV L+ RRL+ WGG+    F+P  LP W+  +    V  K+F EE RPNH L+NEY  G+GIM H DGP Y P  A +S G+D+ + F P  +L   D     +      SQ    S  L+ R L++F DDAY++ LH I  +
Sbjct:   62 QRLELDIETFRIGAIPRVYYIPEWISEAEEAAVLERVYA--VPDDDERVWVRLKHRRLQMWGGEVKAPFQPLELPKWLLQITQSFVDTKIFDEEHRPNHALINEYGVGEGIMPHEDGPSYFPLVAIISTGADSDVTFEPHRKLQNTDGRDNNIADDAFTSQTSKFSFQLKRRSLLLFTDDAYTKYLHSISGI 251
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BLAST of mRNA_P-littoralis_Contig94.31.2 vs. uniprot
Match: A0A7S1GBR1_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GBR1_9STRA)

HSP 1 Score: 148 bits (374), Expect = 9.830e-37
Identity = 111/280 (39.64%), Postives = 134/280 (47.86%), Query Frame = 2 
Query:  293 LVERLPLDMEKMRVGDT---PSIFYVPDFISEAEEQEIRTRTYARDVDADASDEWVSLRSRRLKCWGGQPG-ESFRPEPLPPWVGALCDLLVVRKVFAEEDRPNHVLLNEYQPGQGIMAHTDGPFYRPRTATLSLGSDAIMHFSPRLAAADVGRPGVQSQPQASLVLRPRCLVVFADDAYSRQLHGIDAVREETVGSATGGDGSSGDTSGEDGLSGGGGGRTPVINAEAAGAPEG-TVLRRKLRVSLTFRRVC------ADADCGRDVDAVSELRDGDQR 1099
            L  R  LD     VG     PS+ Y PDF++  EE E+   TY       A+  W  LR RRL+ +GG P  E  R +PLPP++ A    LV   VFA +  PNHVLLNEY+PGQGIM H DGP Y P  A LSL S   + F P L A+   R G    P AS++ RPR L+VF + AY+   H I   RE      T       DT               V N +  G   G  V+R   RVS T RRV        D D G DV A +E  D  +R
Sbjct:   91 LAPRRALDAASGEVGAALGLPSVAYYPDFVTPEEEGELLASTYL------AAAPWHPLRKRRLQMYGGTPAAEGMRAQPLPPFMHACARALVEAGVFAADAPPNHVLLNEYEPGQGIMPHKDGPLYHPVVAILSLRSSCCLDFWPSLEASS--REG--GAPVASVLCRPRSLLVFREAAYTDVWHSI---RERDADPIT-------DT---------------VANRDMLGLEVGDVVVREDTRVSFTIRRVLNVLPSSGDGDDGDDVPATAEAADEARR 335
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BLAST of mRNA_P-littoralis_Contig94.31.2 vs. uniprot
Match: A0A2R5GWX9_9STRA (Alpha-ketoglutarate-dependent dioxygenase alkB-like 6 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GWX9_9STRA)

HSP 1 Score: 143 bits (360), Expect = 2.170e-35
Identity = 83/226 (36.73%), Postives = 116/226 (51.33%), Query Frame = 2 
Query:  350 IFYVPDFISEAEEQEIRTRTYARDVDADASDEWVSLRSRRLKCWGGQPGESFRPEPLPPWVGALCDLLVVRKVFAEEDRPNHVLLNEYQPGQGIMAHTDGPFYRPRTATLSLGSDAIMHFSPRLAAADVGRPGVQSQPQASLVLRPRCLVVFADDAYSRQLHGIDAVREETVGSATGGDGSSGDTSGEDGLSGGGGGRTPVINAEAAGAPEGTVLRRKLRVSLTFR 1027
            ++Y+P+F +  E  ++  +TY++         W  +RSRRL+C        +R   +PPW+  L   LV   +F+   RPNH LLNEY+PGQGI+ HTDGP Y    A +SLGS A   F+ RL   ++G    +++  A+L+L+PR LVVFA DAY   LH + A+ EE V                            V N EAA A  G  + R  RVS+T R
Sbjct:   92 VWYIPNFCTVEEHDDMLEQTYSKAAS------WKDIRSRRLQC--------YREPEMPPWLDTLASSLVQAGIFSPAQRPNHALLNEYEPGQGILGHTDGPVYHSLVACISLGSPATFRFTERLLTDEIGVR--EARELATLLLQPRSLVVFAADAYREALHSVPALLEEVV-------------------------SADVANIEAAQASVGDRIPRTTRVSITMR 276
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig94.31.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNG9_ECTSI2.070e-12565.36Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A835ZDT2_9STRA8.140e-5346.34Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A4D9DGD1_9STRA8.550e-5336.39Fe2OG dioxygenase domain-containing protein n=2 Ta... [more]
A0A7S2G6U9_9STRA3.560e-5044.73Hypothetical protein n=2 Tax=Florenciella parvula ... [more]
A0A7S2G3H8_9STRA3.160e-4846.77Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A8K1CCV7_PYTOL4.840e-3936.65Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S0PB53_CAFRO6.740e-3844.55Hypothetical protein n=1 Tax=Cafeteria roenbergens... [more]
K3WDT5_GLOUD3.600e-3741.67Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A7S1GBR1_9STRA9.830e-3739.64Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A2R5GWX9_9STRA2.170e-3536.73Alpha-ketoglutarate-dependent dioxygenase alkB-lik... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig94contigP-littoralis_Contig94:125990..133392 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FNG9
PFAMs2OG-FeII_Oxy_2
Model size1515
Max annot lvl2759|Eukaryota
KEGG koko:K10768
Hectar predicted targeting categoryother localisation
Exons3
Evalue2.8e-128
EggNOG OGsKOG3200@1|root,KOG3200@2759|Eukaryota
Ec32 ortholog descriptionAlpha-ketoglutarate-dependent dioxygenase AlkB-like
Ec32 orthologEc-01_005500.1
Descriptionferrous iron binding
Cds size1014
COG categoryJ
BRITEko00000,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791850.7289476-UTR-P-littoralis_Contig94:125989..1263961680791850.7289476-UTR-P-littoralis_Contig94:125989..126396Pylaiella littoralis U1_48UTRP-littoralis_Contig94 125990..126396 -
1680791850.7853158-UTR-P-littoralis_Contig94:133298..1333921680791850.7853158-UTR-P-littoralis_Contig94:133298..133392Pylaiella littoralis U1_48UTRP-littoralis_Contig94 133299..133392 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791850.7472758-CDS-P-littoralis_Contig94:126396..1268961680791850.7472758-CDS-P-littoralis_Contig94:126396..126896Pylaiella littoralis U1_48CDSP-littoralis_Contig94 126397..126896 -
1680791850.7612405-CDS-P-littoralis_Contig94:127420..1277031680791850.7612405-CDS-P-littoralis_Contig94:127420..127703Pylaiella littoralis U1_48CDSP-littoralis_Contig94 127421..127703 -
1680791850.7728925-CDS-P-littoralis_Contig94:133067..1332981680791850.7728925-CDS-P-littoralis_Contig94:133067..133298Pylaiella littoralis U1_48CDSP-littoralis_Contig94 133068..133298 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig94.31.2prot_P-littoralis_Contig94.31.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig94 126397..133298 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig94.31.2

>prot_P-littoralis_Contig94.31.2 ID=prot_P-littoralis_Contig94.31.2|Name=mRNA_P-littoralis_Contig94.31.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=338bp
MTSLDFQSLLKQEKARQRAEFVQQNQTAVQPHHDSVAANLRRDAEARVPP
DGGLGRTQPSPPCFVDLVERLPLDMEKMRVGDTPSIFYVPDFISEAEEQE
IRTRTYARDVDADASDEWVSLRSRRLKCWGGQPGESFRPEPLPPWVGALC
DLLVVRKVFAEEDRPNHVLLNEYQPGQGIMAHTDGPFYRPRTATLSLGSD
AIMHFSPRLAAADVGRPGVQSQPQASLVLRPRCLVVFADDAYSRQLHGID
AVREETVGSATGGDGSSGDTSGEDGLSGGGGGRTPVINAEAAGAPEGTVL
RRKLRVSLTFRRVCADADCGRDVDAVSELRDGDQRET*
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mRNA from alignment at P-littoralis_Contig94:125990..133392-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig94.31.2 ID=mRNA_P-littoralis_Contig94.31.2|Name=mRNA_P-littoralis_Contig94.31.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=7403bp|location=Sequence derived from alignment at P-littoralis_Contig94:125990..133392- (Pylaiella littoralis U1_48)
ACTCACCTCTCACAGCTCACAGCCTTAGCACTCCCGTCACGGTCGCCCTG
ACAACAAACCGTCTTGGTACCTTCCACATGTCTGTGAGAAAGTTATGACG
AGCCTGGACTTTCAAAGCCTTCTGAAGCAGGAGAAGGCTCGGCAACGGGC
CGAGTTTGTACAACAAAATCAAACTGCGGTGCAACCTCATCATGACTCGG
TGGCCGCTAACCTGAGACGAGATGCAGAGGCCAGAGTGCCTCCGGATGGG
GGCCTTGGTCGAACACAGCCATCACCGCCGTGCTTCGTGGATCTTGTGGA
GCGACTACCACTCGATATGGAAAAGGCGAGATTGTTTTCCTGATAAAATC
TCAAAGGGAGTTTTTGTTTTCGAGAACAGCAGCAGGGAGATTTTGCTGCT
ACTGCTGGGTGCTGGACTCTCTCTACAAGTAACTTCAACAGAGGTGCACT
CGAAGTATAGCAGTATAGGAGTACTTCTATAGCATGCAAGAAACCAGGCG
AAATCCGGGACGGATAGAGGAATTAAGGCAACGCTCGGGGGGTCGCCGTC
CCCGGTACCCCAGGGCGTCGTTGTGGCAACTTTGGCTCGAACCGTATAAT
TTGTCAGAACTCTGGAATTCACAGCAATTTTACTTGTATTATTTTGCCAC
CTTTCTTTCTGAATCAATTCGAACCGCATAGAGCACAAAAAACCATCACC
TCGCCCTCCTGGGTACAACATTTCATGCCTTCACACTTCTTTTCCAAGCA
AAAGCTCAGCCAACCCGGTACTAAGGTAGCCTCGAGCCCTGTGGGGCTTC
CTGACCCTCACGCCATTTTGCAGGCTGAGAAACTCCAGAAATTCATCACC
TCCATCTCAGATTCTTGGTTGTTTTCTTGCAAGGGCTGGGGGCGCCATTT
TTCGCCTTCTCCCGCCTCCCCCACGTGAACCATGAACGCCCGAGACGTCG
TCGACCTGCGCGCTGGTTTTGTTTCTTGACAGTCCCGATGCAGCGAGTTG
TGTGCCTCCCCCGATCCTCCCCGACAGCAGCGAAAATCAAGCGGGATCCT
CTTTGCCGGCACTTGCTGCCGTCATTCTCAACGCAACCACCTCTTCTGTT
CGAGTGTTCAATATTCAAACTTTCCGTCCTCCTAACGTTGTACGTCTCAT
CATCAAGAGGGTGCCTCCGGGGAGGCGTGGGTTCATGTCAAGGAGCTCCC
ACCAGCTCCGACCGGTGCCCTTCCGGCCCCTACCCCCAACTTTCCAAGGC
GTCCGCGTGATCGTGCAACCTTCTCGATTCTGGTCACTTTTCGACGCCAC
GGACCGGATCTTGATCTTGACGGATTCTGCAATTGCTCTGTCCCCGATGC
TGACCTGAACATCTCTGCCAAAAAAAACCACGCCATCGCGCGTCAAGCAA
AATTCCGGGTGCACGAGCCCGTTCGCGTACGTACGCAAATGGTTCTGACG
CTCGGCACAACAAGAAGTACGAGAACGCAAGACCCAACCACGTGATGCCC
CCTCCCCTCTAAAGCCTCGTGGTCGTAGGGTATCTGTGAGCTAAAATCGA
CTACGAAAGCAGCAACCTCACTTGTGCTTTCTTTTTTTATGTACCCTGAC
TTATGTCTGTCCCTTTTCCCGTTGCCGTGGTCGGACAAAGGGAAGTCGGG
AGCTTCTGCCCTAGGTACGGCTTGTGAATAAACTTGATAGCGGCGAGACA
CCCTCGAATGGTAGATTGCTAGTTATTATATGAAAACAATCGGCACGCCA
TAAATTCGAGCAGCAGACTGAGCACCTCGGACTCGTCTCTGAAATGCAAC
CACGGCCCCCTCTCCTTCTTTTAATGAACTTCAGGCATTTTTTCCGCTTT
CCTGCGTGAATCTTGTGCGCACTGCCCTCGACGGACGCGCGCACCAACGA
CTCCACCGATAGCGCCAATTCCGTGCTCACCCCTTTCCGTCTCCTGCTCC
TGTCAATGATTGCGCACGCGTGCTAGGTGAATGCGATGTCACAAACTCCC
ACAACATGTTTTCGTGACGAGGAGCAATATTCTTTGTCTGCAACGCTGCG
TCCCAGGGGCGTTCCCCTGGCAACCCGATTGATTGGTGCGCCAGTCGTCT
GTATTCGTCGACTGCCGCACTCTGTTGGCTAGCTGTGATTGAGGCCAGCG
TGATATGCCGGCCGCTCATGTGTTCTGCACGCCCGGGATATGTTTAGCAT
CGTACCTCCAGCCGCCGAGGATTTCGAGGCGGCCGAGCATTCTCCTCGTC
AGACAAGCGAGTGTATCTCTCGCCCCACCGCATCGGTTCGACCAAGTGGC
TGCCGCGAAGTTGTCTTCGCGCATCCGAACAGGGTCGCCTTTGGTTTTTC
GTCGGCCCCCTACTAGTTCGTGCATGACCCACGCGGTCAGAACCATTCCA
AAAAGTTCGAGCAGATTAATAGTGGCATGTCTCACGGCGTGCGGCCTCAC
GTTTGAGTTCGCCCTAGAATGTGAGAGCTGCATTGTTTCTCCAGTACACT
CGGAGCTCTCTAATGAATCCGCCTTTCGCGTCGAAGCTTGCGATGCCGCT
CTGTGGTTACTGCTATTCTGCTATTGCGAAGTCTCGCTTTTTCCGCGCAC
TGAACGTCTGTCTGGCCTGCCCGAAATGAGTTGAAACTGTTCTGCTACTG
CTGTTCTGCAGCTGCGAAATCTCGCTTTCCCTGCTCTGAACTGCCTGCTC
CGATGCCGTTGGTGCCAACGCTCGGCTGTTCTGAATTTTTTCGGGCCGTG
TCAGATGTGACTGTTTTCGAGACGTGCCTGGCATTCTGACCTTTCTAGAT
TCCGTTGTTGTAGCGTTCTGCGGCAACCTGGCATGTGGCTTCATGTGGTT
CAACCAACTGCGGTGATTCGTGCTGCATTTGCTGTTAAACGTCTACGAAG
TATTTCTCACCGTGGAACAGGGCCGGTGAAACTGACCCAGGCGTCGGTGC
GTCGCAGGGTCCCACAGACCTCCCGGCATGTGCGAACAGGGTACCAGCTC
GTTCCGGCTCCCCCCCGTCCATGCTGTCGGCTCTGCAGTCGGGCTGAGCC
CGAGCGGTCACAAGCCTCTGCCGCCAGCGCCGCGCCCGGAGTTCGCCCCC
CCCCCTCCTCTACCGCCACCGACCACCCTGCTGAAATTGGCCACGCTCGC
ATGCTGATGCCCGACCCCTGCGGCCGCCTGGGGCTCCTGGGGCCGTGGCT
GCTGTTGAGGCTGTTGCTGGGGCTGCTGCTGCTGATGCTGAGGCTGCTGA
GCCTGATGGGGTGCGGTGGTGGGTGATGAAGCTGCCGGCGACATGCTCGC
ACCGGCACCCGGTGCGGCGGCAGGGGTCGCCGCACCACGCCGTTCTGCAT
GCCCACGGTGGAGGGGCCCTAAGCCCACTCTTGGTCTTGGCCTTCTGCGC
CGGCGCTTTGGACGGGGTCACCGAGTCCTTCCGTTTCACGCCACTAGAGG
GCGTGGATACTTCCCAGCCGCTGAACTTTTCGGCAAGGCTCCCGTGTATC
GTCCAGCTCCGTCAGTCGCTAAAGGCGCTTGAACGTTGGTGCTGGAACGC
CGTCCATCGTGCCGGTCGCTGGCGCCGTCCGGGCAGTCGCCTTGGGGCTC
GTCTGCTTCTACGGCTTGCGCGTGAAACCCCTCGTTCATGCCGTGGTTGA
TGGCTTCCACTGAGAGATGCGCACTTCCGTGCTGAATGAGTCGAACAGCA
CGTAATTGAGTCGAAGGTATGCATTGAGGTGCTTCACCATGAGCTCGAGG
TCCCTCCGCAGGCACTTGATGTGCCCGATGCATACCTCCGGAGCTGTCTC
CATCCCAAACTCTATCGCTGTCATAATACTTCGAGATCATCGTGGCGAAG
TGCACGTGGGCGGGCATGGCCGTTGGCGCTGCACCGCGGGCTAAGGGCGG
GTAGAAGTGAACTTCCAGGGACAGTGCGCCAACGGCCATGCCCGCCCACG
ATGATCGAAGTGCTCATGGCAGTGATAAAGTTCGTGATGGAGACAGCTCC
GGAGATATGCATCGAGCGCATCAAGAGCCTGCGGAGGGAACTCGAGCTCA
TGTGAAGAACAACGTCAAAGTACGATGCAACATTATCATGAATCGGTGGC
CGCTAACCTGAGACGAGATGCAGAGGCCGGAGCCCCTCTGGATGGGGGTC
TTGGTCGGACACAGCCATCAACGTGCTTCGTGGAGCATGCGGAGCGACCA
CCACTCGATACGGAGAAGGCGAGATTGTTTTCTTGATATATTCTCACCGG
GAGTTTTTTTCGAAAACAGCAGCTTCGAGACCCTTTGCCACTGCTGCTGC
TGCTGCTGCTGCTACACTCTAACTTCAACAGGGCTATGCATGTAAGCAAC
GCGCAAACCAACACAGGTGGAGGAAGTAAGATAACGGTGGAGAGGGACGC
CGCCCCGGTATCTCAGGGCCCCGTTGTTGCATTTCACAGTCCTGGCATTT
TTGGCTCCAACCGTATCATTTTTTCTTTCCCACACATCAAACTTGTAGAT
AAAAATCCTTGGCGGTGCCCGTCCCTGGCTGCTGTATGCCCCACACCCTC
TCCTCCCCCGTTTTGCGTTAGAGACACAGACCTCCCGATCTCATCAAAGA
AAATGCCTTGGCCTGAACCTGTCGGTGGATATAAACTGTGCTCGTTCTCA
GTAGAGGCCTTGAAACTCGAGACCGAGGTCGTTGAATTAACGTTTTGAGC
ATCATCCTCCCGGATAGAATTCAGTGAAAAATCCTAGAGAACTGCTGTGC
TTCAAGTGAGGACATCACAAGCTCTTCCCAAGCAACCATACTCCTCGCAG
TTGCCACAGCCAACAGATGTGGTAAGTGAGTTGTGTCCCATGCCTGGACA
GCAGCAGGCAGCTAGAAACGATTTCAGAGGCATTCTTGGTAACTTGGGAA
TTTATACCTAGATGCATTCAGCGGCCCGAAATTGCACCGCACAGAGAGAT
CTGTTGGGTGCCACAATGCGAACCTACCGTCCTCCGCGTGTGCATCCCCG
ATTCACAAACGGATTCGACGCGAATGTAGCTGGCTCGCCGTTCTCATTTA
CGAGGAGAAAAAAAAAATACTGGGAGGATTGAGATTTAGCGGAGATTAAA
ATTTCGATCTCCGGCCCAAAAGGCCCATCCCTAAAAAGACGCCTCACTGT
TGGTGTTTTGGTCCCCTCGAAAGAAAGCTGCATTTGTACAAATCCCTCCC
TCTAGTTCTAGTGAAGTTTTTTTCAGCGAAACTCTGTTTCTTTCCAAACC
CCTTGTTTATTTGTACTGAACCCAGCGTGGCCTTAAGCTGGTACTTGCAC
TATATGTGTTGTGGAAAACACCAGCACTCCACCGCTTGGAATTATTTTTC
GGCCTCAAAGCGTGAACGTTACCGCTACGTGTGACATGGCCTATGACTGC
GACATTCGTATCCCACCACGCCTGTTGAAGATACCAGAAGCATCTCCTAT
GCGTTGCCGAAAAAATGTCATTTTTGTGGTTTTGGGCGATCACCAGGGTG
ACGTGTATACATCCTTGGCCGGCCGGAGACATCAACCGCGTGTCCCGCTT
TAGACAAGAACGTTTGGGGCGAGGTCGATCGTCGCCACCGACTCTCCAAC
CGCCAATGCCTGAACAAGTAAAACACCCAACACCGAAACGCCACCACCGC
GCATATCCGTATTTCTCACCCATCACGTATAACGCGCAGATGCGAGTAGG
CGATACGCCTTCCATCTTCTACGTCCCCGACTTCATCTCGGAAGCGGAAG
AGCAAGAAATACGGACGAGGACGTACGCTAGAGACGTGGACGCCGACGCG
AGCGACGAGTGGGTCTCGCTGAGGTCGCGACGGCTGAAGTGCTGGGGGGG
ACAGCCGGGGGAGAGCTTCCGTCCCGAGCCTCTGCCTCCGTGGGTCGGGG
CGCTGTGCGATTTGCTCGTGGTGCGGAAAGTTTTCGCCGAGGAAGACCGA
CCGAACCACGTTCTGCTAAACGGTGAAAAGAGAGGAGGTGTTGGTGGCGA
AAAGGAGAATGTATGGTATGAAGAGAAAAAGATTGGCGTCAAATTTTACG
TGCAGCAGAGTGATGAATATCACGGGACTCTTTGCGCTGCCGCTGCCTGC
CGTGTTAATCGTACAGCAGTCTGGGGTCTACACAGTGAACAAGGATCATG
TGGGTGACACATATTACAATCACCAGCTCTCCTGTGCTTGACTTACCCGA
TGTCACGAGGACGTGCAGGCTTCCGCACAAACCCTCACCCCTCTCGGAGC
ATACCCGAAACGCCGAGGGGGGAAACCTTCTACATGTCCTGGTTTTTCCA
ACTTGCTCTCAATAAAGCTTCCAATGAAATGAAAAACAAATGAGCCAGTG
GCGTAACAACAGCAGCAGATTTCAACCCTGTTTCTGCTGTCCCACTCCCC
CTGCTACACGCAACACCTTGTAACCACCGCACCTGCGCCTTTGTATGTAT
GTGCTTTACGTTTGTTGGCCAATCGAATCCATCCACTCCTCTCCAGAGTA
CCAACCAGGCCAAGGAATCATGGCCCACACCGACGGACCGTTCTACCGAC
CGCGCACCGCCACCCTCAGCTTGGGGAGCGATGCCATCATGCACTTCTCC
CCCCGACTGGCAGCGGCCGACGTCGGGCGACCAGGGGTGCAGAGCCAACC
GCAGGCGTCTCTCGTGCTGAGGCCACGCTGTCTGGTGGTTTTCGCCGACG
ATGCCTACTCCAGGCAGCTGCACGGCATCGATGCAGTGCGGGAGGAGACG
GTGGGCAGCGCAACAGGCGGCGACGGCAGTAGCGGTGATACGAGCGGTGA
AGATGGTCTCAGCGGCGGCGGTGGCGGTCGCACACCCGTCATCAACGCAG
AGGCGGCGGGGGCGCCAGAGGGGACCGTCCTCAGACGAAAGCTTAGAGTG
TCGCTCACCTTTAGGAGGGTTTGTGCTGACGCTGATTGTGGTCGAGATGT
AGACGCCGTCAGTGAACTCAGGGATGGGGATCAGAGAGAGACTTAGAGAT
ATTTGAATTTCAGGTCTGTTTTTTTTTTTGTTAAAAGAAAACACTCGGGA
GGTAGGGTGACTGCCGTTTGCTGGGTCGCGAAGAACCCCACCGGCTGCCC
GTCGCTGTTGCTCGTTTTTTTTCGGAGTTCGGACATGGATCATCAAGAAG
GATGATATTCCACTGCCGATCGCGGCATTTTCGGATCTTGAGCATCGCGG
CGCCACCGTGTGTAACGTCTCATGGTCCATCCGGGTATAGAAACAGCAAA
CAGGGGTAACCGCTCTTGCCATGTGCGCAGACCATGACTGTCACGAACGA
TGATGAGATCGTTAACCAACAGCGGGTCGGCTTTCTTACGGCCACGTACC
GTCCCCTTCCAGCATACGAAGTACATAATAAATGACGCGCTCGTTCTTCG
TCC
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Coding sequence (CDS) from alignment at P-littoralis_Contig94:125990..133392-

>mRNA_P-littoralis_Contig94.31.2 ID=mRNA_P-littoralis_Contig94.31.2|Name=mRNA_P-littoralis_Contig94.31.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1014bp|location=Sequence derived from alignment at P-littoralis_Contig94:125990..133392- (Pylaiella littoralis U1_48)
ATGACGAGCCTGGACTTTCAAAGCCTTCTGAAGCAGGAGAAGGCTCGGCA
ACGGGCCGAGTTTGTACAACAAAATCAAACTGCGGTGCAACCTCATCATG
ACTCGGTGGCCGCTAACCTGAGACGAGATGCAGAGGCCAGAGTGCCTCCG
GATGGGGGCCTTGGTCGAACACAGCCATCACCGCCGTGCTTCGTGGATCT
TGTGGAGCGACTACCACTCGATATGGAAAAGATGCGAGTAGGCGATACGC
CTTCCATCTTCTACGTCCCCGACTTCATCTCGGAAGCGGAAGAGCAAGAA
ATACGGACGAGGACGTACGCTAGAGACGTGGACGCCGACGCGAGCGACGA
GTGGGTCTCGCTGAGGTCGCGACGGCTGAAGTGCTGGGGGGGACAGCCGG
GGGAGAGCTTCCGTCCCGAGCCTCTGCCTCCGTGGGTCGGGGCGCTGTGC
GATTTGCTCGTGGTGCGGAAAGTTTTCGCCGAGGAAGACCGACCGAACCA
CGTTCTGCTAAACGAGTACCAACCAGGCCAAGGAATCATGGCCCACACCG
ACGGACCGTTCTACCGACCGCGCACCGCCACCCTCAGCTTGGGGAGCGAT
GCCATCATGCACTTCTCCCCCCGACTGGCAGCGGCCGACGTCGGGCGACC
AGGGGTGCAGAGCCAACCGCAGGCGTCTCTCGTGCTGAGGCCACGCTGTC
TGGTGGTTTTCGCCGACGATGCCTACTCCAGGCAGCTGCACGGCATCGAT
GCAGTGCGGGAGGAGACGGTGGGCAGCGCAACAGGCGGCGACGGCAGTAG
CGGTGATACGAGCGGTGAAGATGGTCTCAGCGGCGGCGGTGGCGGTCGCA
CACCCGTCATCAACGCAGAGGCGGCGGGGGCGCCAGAGGGGACCGTCCTC
AGACGAAAGCTTAGAGTGTCGCTCACCTTTAGGAGGGTTTGTGCTGACGC
TGATTGTGGTCGAGATGTAGACGCCGTCAGTGAACTCAGGGATGGGGATC
AGAGAGAGACTTAG
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