mRNA_P-littoralis_Contig925.21.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig925.21.1
Unique NamemRNA_P-littoralis_Contig925.21.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig925.21.1 vs. uniprot
Match: UPI000A2A66BF (protein ALP1-like isoform X1 n=2 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A66BF)

HSP 1 Score: 215 bits (547), Expect = 2.300e-64
Identity = 121/259 (46.72%), Postives = 159/259 (61.39%), Query Frame = 1
Query:    1 LRYPGRWHDLQVEFGREYTQLSRIFNVVIDWVYENHLHRVTHNLEFFFPRFPTMCKKIEAKG---ELCGGNFIGFIDGTLRRNCRPGGDPALQEQMYDGHHCAHGLAWQSVVFADGML-EIWGPEMGRRNDALLLSRSGLNGRLAAVQAGNPVQFKVYGDAAYPVSSHVDRGFRGANLTVAQKTYNRELSKVRVSVEWQFGKIVALFPYVDFKQNLKIKLQAVAKYYAVAVLLTNAHTCLFGSITGEYFDMSAPSLEAY 765
            L YP RW DLQ  FGR  ++LS IFN VID +YE+H H +   L+  +    T  + I AKG   + C G    FIDGT R   RP      Q  MY GH   H L +QSV   +G++  ++GP  GRR+DA +L  SGL  +L  +Q  N   + +YGD AY ++ ++   FRGA LT  Q+ +NR +SK+RV+VEW FGKI   F ++DFK+N+K+ LQ V KYY VA LLTN HTCL+ S TG YF++  PSLE Y
Sbjct:  144 LAYPNRWCDLQSLFGRSESELSLIFNEVIDDIYESH-HHLIDALDLVWLDPQTFSQAIHAKGAPLDQCWG----FIDGTPRPIARP---IRSQRIMYSGHKRVHCLKFQSVQAPNGLIAHLFGPIEGRRHDAFMLGESGLADKLRPLQRPNGEPYVIYGDPAYGLTRNILAPFRGAQLTHDQQEFNRRMSKLRVAVEWGFGKICQQFAFLDFKKNMKVLLQPVGKYYVVAALLTNCHTCLYNSQTGRYFELYPPSLEDY 394          
BLAST of mRNA_P-littoralis_Contig925.21.1 vs. uniprot
Match: UPI00106D38F2 (uncharacterized protein LOC114539259 n=4 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106D38F2)

HSP 1 Score: 212 bits (540), Expect = 8.980e-64
Identity = 115/260 (44.23%), Postives = 159/260 (61.15%), Query Frame = 1
Query:    7 YPGRWHDLQVEFGREYTQLSRIFNVVIDWVYENHLHRVTHNLEFFFP--RFPTMCKKIEAKGELCGGNFIGFIDGTLRRNCRPGGDPALQEQMYDGHHCAHGLAWQSVVFADGML-EIWGPEMGRRNDALLLSRSGLNGRLAA---VQAGNPVQFKVYGDAAYPVSSHVDRGFRGANLTVAQKTYNRELSKVRVSVEWQFGKIVALFPYVDFKQNLKIKLQAVAKYYAVAVLLTNAHTCLFGSITGEYFDMSAPSLEAYF 768
            YP R+ D+   FGR   +LS I NVV+D++Y++H HRV+H  E  F           I  KG     N +GFIDGT+R  CRPG    LQ  +Y+GH   H + +QSV   +GM+  ++GP  GRR+D+ +L++SGL  +L      + G P+   +YGD AYP+  H+   FR A LT   K +N+ +SKVR++VEW FG IV  F ++DFK+NLKI L  V K Y V  +L NA TCL+G+ T EYF +S P+L+ YF
Sbjct:  104 YPCRYSDMIPLFGRAVPELSMITNVVVDYIYDHHGHRVSHWNEMLFSPDNLKDYASSIFLKGAALN-NCVGFIDGTVRAICRPG---KLQRAVYNGHKRVHAIKFQSVALPNGMIGHLYGPMEGRRHDSFMLAQSGLLNQLQTFCFTEEGQPLC--LYGDPAYPLRVHLQAPFRNAVLTQPMKEFNKSMSKVRIAVEWLFGDIVNYFKFMDFKKNLKIGLSCVGKMYIVCAILRNALTCLYGNQTSEYFGLSPPTLQEYF 357          
BLAST of mRNA_P-littoralis_Contig925.21.1 vs. uniprot
Match: UPI00106A10C3 (uncharacterized protein LOC114539446 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106A10C3)

HSP 1 Score: 207 bits (526), Expect = 6.860e-62
Identity = 119/258 (46.12%), Postives = 155/258 (60.08%), Query Frame = 1
Query:    1 LRYPGRWHDLQVEFGREYTQLSRIFNVVIDWVYENHLHRVTH-NLEFFFPRFPTMCKKIEAKGELCGGNFIGFIDGTLRRNCRPGGDPALQEQMYDGHHCAHGLAWQSVVFADGML-EIWGPEMGRRNDALLLSRSGLNGRLAA-VQAGNPVQFKVYGDAAYPVSSHVDRGFRGANLTVAQKTYNRELSKVRVSVEWQFGKIVALFPYVDFKQNLKIKLQAVAKYYAVAVLLTNAHTCLFGSITGEYFDMSAPSLEAY 765
            L YP RW DL   FGR   ++S IFN +++ +Y      +T  NL +  P+    C  I A+G     N  GFIDGT R  CRP      Q  M+ GH   H + +QSVV  +G++  ++GP  GRR+DA +L+ SGL  +L   +   N   F +YGD AYPV SH+   FRGA L+  Q+ +NR +S VR SVEW FGKIV  F ++DF +NLK+ LQ V K Y VAVLLTN HTCL+GS TG +F +  P LEAY
Sbjct:   87 LAYPNRWCDLSGIFGRPEPEMSLIFNEIVNDLYNRFSFLLTQLNLAWLDPQI--FCDAIHARGAPLR-NCWGFIDGTARPICRP---IFSQRIMFSGHKRTHCIKFQSVVTPNGLICNLFGPIEGRRHDAFMLTASGLLEQLQLHMNNENGEPFVLYGDPAYPVRSHLLAPFRGAQLSPTQQQFNRHMSSVRTSVEWGFGKIVQYFAFMDFSKNLKVLLQPVGKLYCVAVLLTNCHTCLYGSQTGHFFGVDPPQLEAY 338          
BLAST of mRNA_P-littoralis_Contig925.21.1 vs. uniprot
Match: UPI00106A72DF (uncharacterized protein LOC114526587 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106A72DF)

HSP 1 Score: 200 bits (508), Expect = 2.370e-60
Identity = 110/249 (44.18%), Postives = 151/249 (60.64%), Query Frame = 1
Query:   40 FGREYTQLSRIFNVVIDWVYENHLHRVTHNLEFFFP--RFPTMCKKIEAKGELCGGNFIGFIDGTLRRNCRPGGDPALQEQMYDGHHCAHGLAWQSVVFADGML-EIWGPEMGRRNDALLLSRSGLNGRLAA---VQAGNPVQFKVYGDAAYPVSSHVDRGFRGANLTVAQKTYNRELSKVRVSVEWQFGKIVALFPYVDFKQNLKIKLQAVAKYYAVAVLLTNAHTCLFGSITGEYFDMSAPSLEAYF 768
            FGR   +LS I NVV+D++Y++H HRV+H  E  F           I  KG     N +GFIDGT+R  CRPG    LQ  +Y+GH   H + +QSV   +GM+  ++GP  GRR+D+ +L++SGL  +L      + G P+   +YGD AYP+  H+   FR A LT   K   + +SKVR++VEW FG IV  F ++DFK+NLKI L  V K Y V  +L NA TCL+G+ T EYF +S P+L+ YF
Sbjct:    5 FGRAVPELSMITNVVVDYIYDHHGHRVSHWNEMLFSPDNLKDYASSIFLKGAALN-NCVGFIDGTVRAICRPG---KLQRAVYNGHKRVHAIKFQSVALPNGMIGHLYGPMEGRRHDSFMLAQSGLLNQLQTFCFTEEGQPLC--LYGDPAYPLRVHLQAPFRNAVLTQPMKELYKSMSKVRIAVEWLFGDIVNYFKFMDFKKNLKIGLSCVGKMYIVCAILRNALTCLYGNQTSEYFGLSPPTLQEYF 247          
BLAST of mRNA_P-littoralis_Contig925.21.1 vs. uniprot
Match: A0A6S7GNP4_PARCT (DDE Tnp4 domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GNP4_PARCT)

HSP 1 Score: 202 bits (513), Expect = 1.080e-59
Identity = 112/256 (43.75%), Postives = 153/256 (59.77%), Query Frame = 1
Query:    1 LRYPGRWHDLQVEFGREYTQLSRIFNVVIDWVYENHLHRVTHNLEFFFPRFPTMCKKIEAKGELCGGNFIGFIDGTLRRNCRPGGDPALQEQMYDGHHCAHGLAWQSVVFADGML-EIWGPEMGRRNDALLLSRSGLNGRLAAVQAGNPVQFKVYGDAAYPVSSHVDRGFRGANLTVAQKTYNRELSKVRVSVEWQFGKIVALFPYVDFKQNLKIKLQAVAKYYAVAVLLTNAHTCLFGSITGEYFDMSAPSLEAY 765
            L YP RW DL   FGR   +LS +FN+VI+ +Y    H +T +L+  +         +  KG      + GFIDGT RR  RP      Q  MY GH   H + +QSV+  +G++  ++GP  GRR+DA +L  SGL   L  +   N   + VYGD AY +S H+   F+GA+LT  Q+ +NR++S+VRV VEW FGKI   F Y+DF++NLK+ LQ VAKYYAV  LL N HTCL+GS+   +F++  P LE Y
Sbjct:  108 LTYPNRWCDLVKIFGRSEAELSILFNMVINDIYTRFNHLLT-SLDLAWLDPAIFADAVHCKGAPLNQCW-GFIDGTTRRIARP---VRNQNVMYSGHKRIHCIKFQSVLAPNGLIAHLFGPIEGRRHDAFMLGVSGLLPLLERIIKPNGEPYVVYGDPAYGISRHIISPFKGAHLTEPQQQFNRDMSEVRVCVEWGFGKIAQYFAYLDFQKNLKVLLQPVAKYYAVGALLINCHTCLYGSVASSFFNLDPPLLEDY 358          
BLAST of mRNA_P-littoralis_Contig925.21.1 vs. uniprot
Match: A0A7D9MAK9_PARCT (DDE Tnp4 domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9MAK9_PARCT)

HSP 1 Score: 200 bits (509), Expect = 4.650e-59
Identity = 112/262 (42.75%), Postives = 152/262 (58.02%), Query Frame = 1
Query:    1 LRYPGRWHDLQVEFGREYTQLSRIFNVVIDWVYENHLHRVTHNLEFFFPR--FPTMCKKIEAKGELCGGNFIGFIDGTLRRNCRPGGDPALQEQMYDGHHCAHGLAWQSVVFADGML-EIWGPEMGRRNDALLLSRSGLNGRLAAVQAGNPVQ-FKVYGDAAYPVSSHVDRGFRGANLTVAQKTYNRELSKVRVSVEWQFGKIVALFPYVDFKQNLKIKLQAVAKYYAVAVLLTNAHTCLFGSITGEYFDMSAPSLEAYFAF 774
            L YP R+ DL   FGR   +LS I N V+D++Y  H H +   +  +         C+ +  KG     N  GF+DGT+R  CRPG     Q Q+Y+GH   H L +QSVV A+G++  + GP  G+R+DA +    GL  +L         +   +YGDAAYPVS HV   F+GANLT  QK +N  +S+VR++VEW FG I   F +VDFK+NLK+ LQAV K Y V+ +L NA  CL+G+I   +F+   PSLE Y  F
Sbjct:  107 LAYPCRYVDLIPLFGRSKAELSIIGNDVLDFIYAEHKHLLNSFVAPWMSERMLGIYCEAVHRKGAALD-NCWGFVDGTVRPICRPG---KYQRQVYNGHKRVHALKYQSVVAANGLIVHMHGPVEGKRHDARIFVEFGLQEQLQLHSYDEDNRSLCIYGDAAYPVSRHVQGSFKGANLTEPQKAFNTSMSRVRIAVEWPFGGISTYFAFVDFKKNLKLYLQAVGKLYIVSTILHNARACLYGNIISAFFETQPPSLEEYLGF 364          
BLAST of mRNA_P-littoralis_Contig925.21.1 vs. uniprot
Match: A0A1S3HAY6_LINUN (uncharacterized protein LOC106153684 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3HAY6_LINUN)

HSP 1 Score: 198 bits (504), Expect = 1.840e-58
Identity = 110/259 (42.47%), Postives = 155/259 (59.85%), Query Frame = 1
Query:    1 LRYPGRWHDLQVEFGREYTQLSRIFNVVIDWVYENHLHRVTHNLEFFFPRFPTMCKKIEA---KGELCGGNFIGFIDGTLRRNCRPGGDPALQEQMYDGHHCAHGLAWQSVVFADGML-EIWGPEMGRRNDALLLSRSGLNGRLAAVQAGNPVQFKVYGDAAYPVSSHVDRGFRGANLTVAQKTYNRELSKVRVSVEWQFGKIVALFPYVDFKQNLKIKLQAVAKYYAVAVLLTNAHTCLFGSITGEYFDMSAPSLEAY 765
            L YP R  DL+  FGR  +QLS I N  +D +Y+N+ H + HNL+  +     + +  EA   +G       IGF+DGT+R   RP     LQ   Y+GH   H + +QSVV  +G++  ++GP  G+R+D  LL  SGL  +L  +      +F +YGD AYP+   +   FRGAN+T  Q  +N E+S+VR SVEW FGKIV  F ++DFK+NLK+ LQ V K YAV  +LTN HTC +G +  E+F++  P+LE Y
Sbjct:   95 LSYPNRLVDLENVFGRCTSQLSVIVNETVDHIYDNYSHLI-HNLDQPWMDMDHLMQYSEAIVSQGAPLN-KCIGFVDGTVRPISRP---TFLQRTCYNGHKRTHAIKFQSVVIPNGIICSLYGPMEGKRHDCALLKESGLLQQLQQLPQDVDGRFCIYGDPAYPIRPQLQCPFRGANITPEQHAFNSEMSRVRESVEWAFGKIVQTFAFLDFKKNLKLYLQPVGKLYAVGAILTNCHTCCYGGVITEFFNVHPPTLEEY 348          
BLAST of mRNA_P-littoralis_Contig925.21.1 vs. uniprot
Match: UPI000C039C62 (uncharacterized protein LOC111324059 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C039C62)

HSP 1 Score: 196 bits (498), Expect = 2.440e-58
Identity = 111/259 (42.86%), Postives = 156/259 (60.23%), Query Frame = 1
Query:    1 LRYPGRWHDLQVEFGREYTQLSRIFNVVIDWVYENHLHRVTHNLEFFFPRFPTMCKKIEAKGE---LCGGNFIGFIDGTLRRNCRPGGDPALQEQMYDGHHCAHGLAWQSVVFADGML-EIWGPEMGRRNDALLLSRSGLNGRLAAVQAGNPVQFKVYGDAAYPVSSHVDRGFRGANLTVAQKTYNRELSKVRVSVEWQFGKIVALFPYVDFKQNLKIKLQAVAKYYAVAVLLTNAHTCLFGSITGEYFDMSAPSLEAY 765
            L YP R  DL   FGR  ++LS I   ++D +Y+ +   +  +L+  +       + I AKG+    C G+    IDGT+R  CRP  +  +   MY GH   H L +QSV   +G++  ++GP  GRR+DA +L  SGL   L   +  N   + +YGD AY ++ ++   FRGA LT  Q+ +N ++SKVR SVEW FGKI+  F Y+DFK+NLK+ LQ+VAKYY V VLLTN HTCL+GS T  +F++  PSLE Y
Sbjct:   35 LVYPNRLCDLADVFGRSISELSFITTKIVDHLYDRY-RDLLESLDLLWLDLEIFSEAIHAKGDPLTQCWGS----IDGTVRPICRPIRNQGI---MYSGHKRTHCLKFQSVHAPNGLIAHLFGPIEGRRHDAFMLGESGLIHILQRFRKPNGEPYIIYGDPAYGITRNILAPFRGARLTADQQEFNSQMSKVRCSVEWGFGKIIQNFAYLDFKKNLKVLLQSVAKYYVVGVLLTNCHTCLYGSPTSTFFNLDPPSLETY 285          
BLAST of mRNA_P-littoralis_Contig925.21.1 vs. uniprot
Match: UPI00077A71E6 (uncharacterized protein LOC107340903 n=3 Tax=Acropora TaxID=6127 RepID=UPI00077A71E6)

HSP 1 Score: 198 bits (504), Expect = 5.100e-58
Identity = 109/257 (42.41%), Postives = 151/257 (58.75%), Query Frame = 1
Query:    1 LRYPGRWHDLQVEFGREYTQLSRIFNVVIDWVYENHLHRVTHNLEFFFPRFPTMCKKIEAKGELCGGNFIGFIDGTLRRNCRPGGDPALQEQMYDGHHCAHGLAWQSVVFADGML-EIWGPEMGRRNDALLLSRSGLNGRLAA-VQAGNPVQFKVYGDAAYPVSSHVDRGFRGANLTVAQKTYNRELSKVRVSVEWQFGKIVALFPYVDFKQNLKIKLQAVAKYYAVAVLLTNAHTCLFGSITGEYFDMSAPSLEAY 765
            L YP RW +L   FGR   +LS IFN ++  VY    H +  +L+  +       + I  KG      + GF+DGT R   RP      Q  M+ GH   H L +QSVV  +GM+  ++GP  GRR+DA +L+ SGL  +L   +   N   + +YGD AYPV  H+   FRGA LT  ++ +N+++S VR+SVEW +GKIV  F ++DF +NLK+ LQ V K Y V  +L N HTCL+GS TG++FD+  PSLE Y
Sbjct:  137 LAYPNRWCELTKLFGRAEPELSMIFNEILSDVYNRFSH-LLESLDLIWLDADAFSRAIYGKGAPLRDCW-GFVDGTARPTTRP---VRNQRIMFSGHKRVHCLKFQSVVSPNGMICHLFGPVEGRRHDAFMLAESGLLPKLERRLNKPNGEPYVIYGDPAYPVRRHILAPFRGARLTPDEERFNKDMSTVRISVEWGYGKIVRYFAFLDFNKNLKVLLQPVGKMYVVGAILANCHTCLYGSQTGDFFDLDPPSLETY 388          
BLAST of mRNA_P-littoralis_Contig925.21.1 vs. uniprot
Match: UPI000F558385 (uncharacterized protein LOC113685269 n=2 Tax=Astrocoeniina TaxID=123757 RepID=UPI000F558385)

HSP 1 Score: 196 bits (497), Expect = 6.850e-58
Identity = 115/262 (43.89%), Postives = 153/262 (58.40%), Query Frame = 1
Query:    1 LRYPGRWHDLQVEFGREYTQLSRIFNVVIDWVYENHLHRVTH-NLEFFFP-RFPTMCKKIEAKGELCGGNFIGFIDGTLRRNCRPGGDPALQEQMYDGHHCAHGLAWQSVVFADGML-EIWGPEMGRRNDALLLSRSGLNG---RLAAVQAGNPVQFKVYGDAAYPVSSHVDRGFRGANLTVAQKTYNRELSKVRVSVEWQFGKIVALFPYVDFKQNLKIKLQAVAKYYAVAVLLTNAHTCLFGSITGEYFDMSAPSLEAYF 768
            L YP R+ DL   FGR   +LS I+N+V+D +Y  H +R++  N     P       + I  KG     N IGFIDGT+R  CRPG    LQ  +Y+GH   H L +QS    +GM+  ++GP  GR++DA +L+ SGL     R A    G P+   +YGD AYP+  H+   FR A LT A + +N  +S VR SVEW FG IV  F ++DF +NLKI L +V K Y V+ LL NAHTC  G+ T EYF++  P+LE YF
Sbjct:   57 LTYPCRYSDLIPRFGRPIPELSMIYNIVLDHIYNTHGYRISQWNNTILDPVGLERHAEAIHNKGAALD-NCIGFIDGTVRPICRPG---ELQRVVYNGHKRVHALKFQSFTLPNGMIANMYGPVEGRKHDAGMLADSGLLNDLQRFAFSTTGQPMC--LYGDPAYPLRIHLQAPFRNAVLTPAMQAFNSSMSAVRESVEWLFGDIVNYFKFMDFHKNLKIGLSSVGKMYIVSALLCNAHTCCNGNQTSEYFNLEPPTLEEYF 312          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig925.21.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000A2A66BF2.300e-6446.72protein ALP1-like isoform X1 n=2 Tax=Exaiptasia di... [more]
UPI00106D38F28.980e-6444.23uncharacterized protein LOC114539259 n=4 Tax=Dendr... [more]
UPI00106A10C36.860e-6246.12uncharacterized protein LOC114539446 n=1 Tax=Dendr... [more]
UPI00106A72DF2.370e-6044.18uncharacterized protein LOC114526587 n=1 Tax=Dendr... [more]
A0A6S7GNP4_PARCT1.080e-5943.75DDE Tnp4 domain-containing protein n=1 Tax=Paramur... [more]
A0A7D9MAK9_PARCT4.650e-5942.75DDE Tnp4 domain-containing protein n=1 Tax=Paramur... [more]
A0A1S3HAY6_LINUN1.840e-5842.47uncharacterized protein LOC106153684 n=1 Tax=Lingu... [more]
UPI000C039C622.440e-5842.86uncharacterized protein LOC111324059 n=1 Tax=Stylo... [more]
UPI00077A71E65.100e-5842.41uncharacterized protein LOC107340903 n=3 Tax=Acrop... [more]
UPI000F5583856.850e-5843.89uncharacterized protein LOC113685269 n=2 Tax=Astro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig925contigP-littoralis_Contig925:83923..84955 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog7668.SPU_016560-tr
PFAMsDDE_Tnp_4
Model size777
Max annot lvl33154|Opisthokonta
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.02e-54
EggNOG OGs2AWDH@1|root,2RZYI@2759|Eukaryota,3A38W@33154|Opisthokonta,3BS4I@33208|Metazoa,3D9UV@33213|Bilateria
DescriptionDDE superfamily endonuclease
Cds size777
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791837.4921324-CDS-P-littoralis_Contig925:83922..841171680791837.4921324-CDS-P-littoralis_Contig925:83922..84117Pylaiella littoralis U1_48CDSP-littoralis_Contig925 83923..84117 +
1680791837.50701-CDS-P-littoralis_Contig925:84373..849551680791837.50701-CDS-P-littoralis_Contig925:84373..84955Pylaiella littoralis U1_48CDSP-littoralis_Contig925 84374..84955 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig925.21.1prot_P-littoralis_Contig925.21.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig925 83923..84955 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig925.21.1

>prot_P-littoralis_Contig925.21.1 ID=prot_P-littoralis_Contig925.21.1|Name=mRNA_P-littoralis_Contig925.21.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=259bp
LRYPGRWHDLQVEFGREYTQLSRIFNVVIDWVYENHLHRVTHNLEFFFPR
FPTMCKKIEAKGELCGGNFIGFIDGTLRRNCRPGGDPALQEQMYDGHHCA
HGLAWQSVVFADGMLEIWGPEMGRRNDALLLSRSGLNGRLAAVQAGNPVQ
FKVYGDAAYPVSSHVDRGFRGANLTVAQKTYNRELSKVRVSVEWQFGKIV
ALFPYVDFKQNLKIKLQAVAKYYAVAVLLTNAHTCLFGSITGEYFDMSAP
SLEAYFAF*
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mRNA from alignment at P-littoralis_Contig925:83923..84955+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig925.21.1 ID=mRNA_P-littoralis_Contig925.21.1|Name=mRNA_P-littoralis_Contig925.21.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1033bp|location=Sequence derived from alignment at P-littoralis_Contig925:83923..84955+ (Pylaiella littoralis U1_48)
CTCAGGTATCCTGGGCGGTGGCATGACTTACAGGTGGAATTCGGCCGAGA GTACACGCAGTTGTCGCGAATTTTCAACGTTGTCATCGACTGGGTGTACG AAAACCACCTGCACAGGGTGACGCACAATCTTGAGTTCTTCTTTCCCCGC TTTCCAACGATGTGCAAGAAGATCGAGGCGAAAGGTGAGCTGTGTGTGCA AAAGTGCTTGGCCAGCACTATGTAGCATGGCTGAAGTTTTTTTTTGTAGG GCTGTGGCCTTTCGTACGACGCGGTACGACGGCGATAATGCCGCGGAGAC CACTCTGTGGAGTTGGCACGGGTGTAAAAATACCAAAATACGATCTTTTA CTCGCGAAACCTTCCGCTTGATTGGCCGATAACCTGGCTTTGTTTGTACC CTCGATTCCCTCCACCTTGTTGTTGGTGCCCAAGGTGGGATGGCGTGCGA GGGCGGCAACTTCATCGGGTTCATCGACGGTACGCTCAGGAGGAACTGCC GCCCAGGGGGAGATCCCGCGCTGCAGGAGCAAATGTACGACGGCCACCAC TGCGCTCATGGCCTCGCTTGGCAGTCTGTTGTGTTTGCAGATGGGATGCT GGAGATTTGGGGACCAGAAATGGGGCGACGGAACGATGCCCTGTTGCTAA GCAGAAGCGGCTTGAACGGTAGACTCGCGGCAGTGCAGGCAGGGAATCCC GTCCAGTTCAAGGTGTACGGAGACGCGGCGTATCCCGTCAGCTCCCACGT CGACCGGGGTTTCCGCGGCGCGAACCTGACGGTCGCGCAGAAGACCTACA ACAGGGAGCTCTCGAAGGTCAGGGTCTCCGTCGAATGGCAGTTCGGGAAG ATCGTTGCACTTTTTCCGTACGTCGACTTCAAGCAGAACCTGAAGATAAA GCTACAGGCGGTCGCGAAGTACTACGCCGTAGCGGTGCTGCTCACTAACG CGCACACTTGCCTCTTCGGGAGCATCACGGGCGAATACTTCGACATGTCC GCTCCGTCACTGGAGGCGTACTTCGCGTTCTAA
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Coding sequence (CDS) from alignment at P-littoralis_Contig925:83923..84955+

>mRNA_P-littoralis_Contig925.21.1 ID=mRNA_P-littoralis_Contig925.21.1|Name=mRNA_P-littoralis_Contig925.21.1|organism=Pylaiella littoralis U1_48|type=CDS|length=777bp|location=Sequence derived from alignment at P-littoralis_Contig925:83923..84955+ (Pylaiella littoralis U1_48)
CTCAGGTATCCTGGGCGGTGGCATGACTTACAGGTGGAATTCGGCCGAGA
GTACACGCAGTTGTCGCGAATTTTCAACGTTGTCATCGACTGGGTGTACG
AAAACCACCTGCACAGGGTGACGCACAATCTTGAGTTCTTCTTTCCCCGC
TTTCCAACGATGTGCAAGAAGATCGAGGCGAAAGGTGAGCTGTGTGGCGG
CAACTTCATCGGGTTCATCGACGGTACGCTCAGGAGGAACTGCCGCCCAG
GGGGAGATCCCGCGCTGCAGGAGCAAATGTACGACGGCCACCACTGCGCT
CATGGCCTCGCTTGGCAGTCTGTTGTGTTTGCAGATGGGATGCTGGAGAT
TTGGGGACCAGAAATGGGGCGACGGAACGATGCCCTGTTGCTAAGCAGAA
GCGGCTTGAACGGTAGACTCGCGGCAGTGCAGGCAGGGAATCCCGTCCAG
TTCAAGGTGTACGGAGACGCGGCGTATCCCGTCAGCTCCCACGTCGACCG
GGGTTTCCGCGGCGCGAACCTGACGGTCGCGCAGAAGACCTACAACAGGG
AGCTCTCGAAGGTCAGGGTCTCCGTCGAATGGCAGTTCGGGAAGATCGTT
GCACTTTTTCCGTACGTCGACTTCAAGCAGAACCTGAAGATAAAGCTACA
GGCGGTCGCGAAGTACTACGCCGTAGCGGTGCTGCTCACTAACGCGCACA
CTTGCCTCTTCGGGAGCATCACGGGCGAATACTTCGACATGTCCGCTCCG
TCACTGGAGGCGTACTTCGCGTTCTAA
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