mRNA_P-littoralis_Contig121.120.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig121.120.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 370 bits (951), Expect = 1.050e-125 Identity = 183/284 (64.44%), Postives = 213/284 (75.00%), Query Frame = 1
Query: 16 AALRRINKENRSFTLRQVSDQLKKIGLEYSSSTVRRWFEAEGAHKVARCIKPSLSDAQKKRRTDFICDEVDETTGNYPDMGNVSHLDERWFFLLRTKKGIRIFPGEQMPGSPRVQHKSHLPTIMVIVANARPDPSHDFDGKIGI*SICLMKTAERSSKR-------------------RKR----REEYEFDCTIDAEWYKDWYIEQLLPVVKKKMPWLRSKRVLVQQDGAGPHTGKNNPEILNSAGMGRGWMVDLVTQPAQSPDLNVYDLGFFSSLSRGYGGL 798
AAL+ +N +NRS TLRQVSDQL +GLE+ TVRRWF GA K A IKPSLSDAQK+ R DFI D VDE G Y D GNV HLDE WF+L+R K+ +R+F GE +PG PRV H+SHLP IMVIVANARPDP+HDFDGKIGI IC+++TA+RSSK+ R R +EEYEFDCTIDAEWYKDWYI+ LLP +K+KMPWLRSKRV+VQQDGA PHTGK NPEILNSAG+ RGW+V+LVTQPAQSPDLN+ DLG F+SL G+
Sbjct: 72 AALKTVNSQNRSSTLRQVSDQLTDLGLEFGKDTVRRWFSKLGAAKKAGRIKPSLSDAQKRHRMDFISDRVDEPIGEYLDQGNVVHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLKPRVWGV 355
BLAST of mRNA_P-littoralis_Contig121.120.1 vs. uniprot
Match: A0A6G0WM27_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WM27_9STRA) HSP 1 Score: 138 bits (347), Expect = 5.010e-35 Identity = 80/230 (34.78%), Postives = 125/230 (54.35%), Query Frame = 1
Query: 109 STVRRWFEAEGAHKVARC-IKPSLSDAQKKRRTDFICDEVDETTGNYPDMGNVSHLDERWFFLLRTKKGIRIFPGEQMPGSPRVQHKSHLPTIMVIVANARPDPSHD------FDGKIGI*SICLMKTAERSSKRRKRREEYEFDCTIDAEWYKDWYIEQLLPVVKKKMPWLRSKRVLVQQDGAGPHTGKNNPEILNSAGMGRGWMVDLVTQPAQSPDLNVYDLGFFSSL 777
+T+ R + EG K A ++P L++ K R +F V E + DM NV H+DE+WF L + ++ E++P + K+ + +M + A ARP HD FDGK+G+ + + A+R+SK R R ++ +E Y D + +LP +K+KM ++++ ++ +QQD AGPH+ K+ N G GW V L QPA SPD NV DLGFF+S+
Sbjct: 127 TTIFRHMKKEGRLKRASSRLRPLLTEVNMKARLEFAMSFVKEDR-EFVDMHNVVHVDEKWFDLTKVNGKFYVYDDEELPLR-ATKSKNFITKVMFLAAVARP--RHDEATNQFFDGKLGMWPFVIQEPAKRTSKNRARDTLISTPISVTSEVYFDMLVSNVLPAIKRKMSFMKNSKIFIQQDNAGPHS-KSVNHRFNQVGSYDGWNVALKNQPANSPDFNVLDLGFFNSI 351
BLAST of mRNA_P-littoralis_Contig121.120.1 vs. uniprot
Match: A0A6G0X8U9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X8U9_9STRA) HSP 1 Score: 137 bits (345), Expect = 9.420e-34 Identity = 89/244 (36.48%), Postives = 132/244 (54.10%), Query Frame = 1
Query: 88 IGLEYSSSTVRRWFEAEGAHKVARCIKPSLSDAQKKRRT----DFICDEVDETTGNYPD------MGNVSHLDERWFFLLRTKKGIRIFPGEQMPGSPRVQHKSHLPTIMVIVANARPDPSHD----FDGKIGI*SICLMKTAERSSKRRKRREEYEFDCTIDAEWYKDWYIEQLLPVVKKKMPWLRSKRVLVQQDGAGPHTGKNNPEILNSAGMGRGWMVDLVTQPAQSPDLNVYDLGFFSSL 777
+GL Y+ T+ R +A + + PSL+DA K +R F+ + +TT + P M + HLDE+WFFL + K+ + GE++P S +HKSH+P +M + A RP H FDGK+GI + TA+RSS+ + + T+ + Y D + +LP + K P R K + +QQDGA PH PE++ SA G + LVTQPA SPDLN+ DLGFF+++
Sbjct: 88 VGLPYT--TLFRKLKAGVIRRATSTLSPSLTDACKYKRLLHCLSFL--RLSKTTRSCPAAFKFHAMLDWIHLDEKWFFLDKDKRTFYLVKGEELP-SRTARHKSHIPKLMFLTAVGRPQYDHGTSQYFDGKLGIFPFVIHGTAKRSSRHQAKGAPVLIPQTVTRDIYVDALVNHVLPAILTKFP-SRWKTLYIQQDGARPHCTDGCPELVASAAS-FGLNIKLVTQPANSPDLNILDLGFFAAI 324
BLAST of mRNA_P-littoralis_Contig121.120.1 vs. uniprot
Match: A0A6A4Z9D8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z9D8_9STRA) HSP 1 Score: 131 bits (329), Expect = 1.910e-32 Identity = 72/219 (32.88%), Postives = 124/219 (56.62%), Query Frame = 1
Query: 151 VARC---IKPSLSDAQKKRRTDFICDEVDETTGN---YPDMGNVSHLDERWFFLLRTKKGIRIFPGEQMPGSPRVQHKSHLPTIMVIVANARP--DPSHD--FDGKIGI*SICLMKTAERSSKRRKRREEYEFDCTIDAEWYKDWYIEQLLPVVKKKMPWLRSKRVLVQQDGAGPHTGKNNPEILNSAGMGRGWMVDLVTQPAQSPDLNVYDLGFFSSL 777
+ RC +KP L+D K R F+ + + DM + H+DE+WF++ + + ++ E +P + + + K H+ +M + A ARP D + +DG+IG+ + A RSSK RKR ++ T+ + Y+ + I++++P V+ K P + ++ +QQD A PH N+P ++ +AG GW + L +QPAQSPDLNV DLG+F+++
Sbjct: 1 MKRCTSRLKPMLTDKHKSDRMAFVQRHLRTGASGKRYWHDMLDTVHIDEKWFYVTKQNRRYYLWSDEAVP-TRKCRSKKHITKVMFLTAVARPRYDARNKRMWDGRIGMWPFVKTRPALRSSKNRKRGDDVTEPFTVTRDVYRSFLIDKVIPAVRSKWPSSKKNQIWIQQDNAKPHVSVNDPAVV-AAGRQGGWTISLCSQPAQSPDLNVLDLGYFNAI 217
BLAST of mRNA_P-littoralis_Contig121.120.1 vs. uniprot
Match: A0A448ZNT1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNT1_9STRA) HSP 1 Score: 131 bits (330), Expect = 1.850e-31 Identity = 79/228 (34.65%), Postives = 122/228 (53.51%), Query Frame = 1
Query: 109 STVRRWFEAEGAHKVARCIKPSLSDAQKKRRTDFICDEVDETTGNYPDMGNVSHLDERWFFLLRTKKGIRIFPGEQMPGSPRVQHKSHLPTIMVIVANARP--DPSHD--FDGKIGI*SICLMKTAERSSKRRKRREEYEFDCTIDAEWYKDWYIEQLLPVVKKKMPWLRSK-RVLVQQDGAGPHTGKNNPEILNSAGMGRGWMVDLVTQPAQSPDLNVYDLGFFSSL 777
S++ R K KP L+ K +R ++I + +D+ G + D H+DE+WF+L RTK+ + PGE P S + K+H+ +M + A ARP D ++ FDGKIGI + + A+RSS R + +D E YK +E++LP + +K P S + +Q+D A PH E+ +A +GW + + TQP SPD+NV DLGFF+S+
Sbjct: 215 SSLHRLVRRGDMRKHNGTTKPLLTAKNKLKRVEWILEHIDDN-GRFDDWFKWIHIDEKWFYLKRTKQTTYLLPGEAEPKSTS-KSKNHMTKVMFLCATARPRWDTNNCAWFDGKIGIWPFVVKEPAKRSSVNRPKGTLVTKPQNVDGEVYKRMLLEKVLPAIYEKWPRGSSTPEIFIQEDNAKPHKATIREEV-KAAAASKGWNITVKTQPPNSPDMNVLDLGFFNSI 439
BLAST of mRNA_P-littoralis_Contig121.120.1 vs. uniprot
Match: A0A485LCW2_9STRA (Aste57867_19494 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LCW2_9STRA) HSP 1 Score: 126 bits (316), Expect = 5.220e-31 Identity = 73/213 (34.27%), Postives = 116/213 (54.46%), Query Frame = 1
Query: 163 IKPSLSDAQKKRRTDFICDEVDETTGNY---PDMGNVSHLDERWFFLLRTKKGIRIFPGEQMPGSPRVQHKSHLPTIMVIVANARPDPSHD----FDGKIGI*SICLMKTAERSSKRRKRREEYEFDCTIDAEWYKDWYIEQLLPVVKKKMPWL-RSKRVLVQQDGAGPHTGKNNPEILNSAGMGRGWMVDLVTQPAQSPDLNVYDLGFFSSL 777
+KP L+D K R DF+ + +Y +M N+ H+DE+WF+L + K+ +F +++ VQ K + +M + A ARP + FDGK+G+ A RSSK R + T+ + Y+D + ++P ++ KMP + R + + +QQD AGPH + + L + G+ R +D+V QPAQSPD NV DLGFF+S+
Sbjct: 14 VKPLLTDKHKATRVDFVKSFLRPALNSYHVFANMHNIVHVDEKWFYLTKIKRRFYVFDDKEL-ALRAVQSKKFITKVMFMAAVARPRYDYTKNRMFDGKLGVSPFVESTLAIRSSKNRPKGTPITSPTTVTGDVYRDMILRNVIPAIQAKMPAIGRRETINIQQDNAGPHQ-QLTTDFLRAHGVER---IDIVPQPAQSPDFNVLDLGFFNSI 221
BLAST of mRNA_P-littoralis_Contig121.120.1 vs. uniprot
Match: A0A485KDC6_9STRA (Aste57867_3131 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KDC6_9STRA) HSP 1 Score: 128 bits (322), Expect = 9.490e-31 Identity = 74/231 (32.03%), Postives = 121/231 (52.38%), Query Frame = 1
Query: 106 SSTVRRWFEAEGAHKVARCIKPSLSDAQKKRRTDFICDEVDETTGN---YPDMGNVSHLDERWFFLLRTKKGIRIFPGEQMPGSPRVQHKSHLPTIMVIVANARPDPSHD----FDGKIGI*SICLMKTAERSSKRRKRREEYEFDCTIDAEWYKDWYIEQLLPVVKKKMPWLRSKRVLVQQDGAGPHTGKNNPEILNSAGMGRGWMVDLVTQPAQSPDLNVYDLGFFSSL 777
S+T+ R + + + +KP ++D K R +F+ V +T + DM + H+DE+WF+L + ++ E +P + K H+ +M + A ARP + +DGKIG+ + A+R SK R+R T+ + Y+++ +E ++P +KK P RS + +QQD A PH ++ + AG GW + LV QPA SPD NV DLGFF+S+
Sbjct: 114 STTLWRVLQTKKLQRRTSRLKPMVTDKHKADRVEFVQAFVRPSTNGQMRWDDMLDRVHIDEKWFYLTLVNRRYYLWHDEDVPVR-KCSSKRHIIKVMFLTAVARPRYDYTQRRMWDGKIGMWPFVSVVPAQRKSKNRERGTPVTTPVTVTKKVYREYLLEHVIPTIKKVWPGRRSHPIYIQQDNARPHVEVDDAAVT-LAGHSDGWSIQLVAQPAMSPDFNVLDLGFFNSI 342
BLAST of mRNA_P-littoralis_Contig121.120.1 vs. uniprot
Match: W4GF08_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GF08_9STRA) HSP 1 Score: 124 bits (312), Expect = 5.120e-30 Identity = 71/230 (30.87%), Postives = 128/230 (55.65%), Query Frame = 1
Query: 109 STVRRWFEAEGAHKVARCIKPSLSDAQKKRRTDFICDEV-DETTGN--YPDMGNVSHLDERWFFLLRTKKGIRIFPGEQMPGSPRVQHKSHLPTIMVIVANARP--DPSHD--FDGKIGI*SICLMKTAERSSKRRKRREEYEFDCTIDAEWYKDWYIEQLLPVVKKKMPWLRSKRVLVQQDGAGPHTGKNNPEILNSAGMGRGWMVDLVTQPAQSPDLNVYDLGFFSSL 777
+T+ R +++ + +KP +D K R F+ + E +G + DM + H+DE+WF++ + + ++ + +P + + + K + +M + A ARP D + +DG+IG+ + A RSSK RKR ++ T+ + Y + I++++P V+ K P ++ +QQD A PH N+P ++ +AG GW + L +QPAQSPDLNV DLG+F+++
Sbjct: 115 TTLWRLLQSKVMKRCTSRLKPMQTDKHKSDRMAFVQRHLRTEASGKRYWHDMLDTVHIDEKWFYVTKQNRRYYLWSDKAVP-TRKCRSKMDIMKVMFLTAVARPRYDARNKRMWDGRIGMRPFVKTRPALRSSKNRKRGDDVTEPFTVTRDVYPSFLIDKVIPAVRSKWPSSMKNQIWIQQDNAKPHVSVNDPAVI-AAGRQGGWTISLCSQPAQSPDLNVLDLGYFNAI 342
BLAST of mRNA_P-littoralis_Contig121.120.1 vs. uniprot
Match: A0A6A5AA16_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AA16_9STRA) HSP 1 Score: 124 bits (311), Expect = 3.970e-29 Identity = 71/226 (31.42%), Postives = 122/226 (53.98%), Query Frame = 1
Query: 121 RWFEAEGAHKVARCIKPSLSDAQKKRRTDFICDEV-DETTGN--YPDMGNVSHLDERWFFLLRTKKGIRIFPGEQMPGSPRVQHKSHLPTIMVIVANARP--DPSHD--FDGKIGI*SICLMKTAERSSKRRKRREEYEFDCTIDAEWYKDWYIEQLLPVVKKKMPWLRSKRVLVQQDGAGPHTGKNNPEILNSAGMGRGWMVDLVTQPAQSPDLNVYDLGFFSSL 777
R +A+ ++ ++P L+ + R +F + D G + DM + H+DE+WF++ + + ++ E P + Q K H+ +M + A ARP D +H +DGK+G+ + A+R SK R R T+ Y+ + +++++P ++ + P R + VQQD A PH ++PE+L +AG GW + L+ QPAQSPD NV DLGFF+++
Sbjct: 119 RLVKAKKLNRRTSRLRPMLTPQHRVARYNFAKSFIRDGYQGRRQWHDMLDCVHIDEKWFYITQVNRRFYLWHDEPTPQR-KAQSKRHITKVMFLCAVARPRHDSAHRKMWDGKVGLWPFVETQLAKRRSKNRDRGTPVTVPMTVTKPVYRRFLVDKVIPAIQAQWPGRRGATIYVQQDNAKPHVAVDDPEVL-AAGRKEGWNIQLMAQPAQSPDFNVLDLGFFNAI 342
BLAST of mRNA_P-littoralis_Contig121.120.1 vs. uniprot
Match: A0A6G0WC47_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WC47_9STRA) HSP 1 Score: 122 bits (307), Expect = 5.760e-29 Identity = 74/211 (35.07%), Postives = 115/211 (54.50%), Query Frame = 1
Query: 154 ARCIKPSLSDAQKKRRTDFICDEVDETTGNYPDMGNVSHLDERWFFLLRTKKGIRIFPGEQMPGSPRVQHKSHLPTIMVIVANARPDPSHDFDGKIGI*SICLMKTAERSSKRRKRREEYEFDCTIDAEWYKDWYIEQLLPVVKKKMPW---LRSKRVLVQQDGAGPHTGKNNPEILNSAGMGRGWMVDLVTQPAQSPDLNVYDLGFFSSL 777
A +P LSD KK R D+ V+ DM + H+DE+WF++ RTK ++P E++P V++K H+ +M + A ARP ++GK+G I + TA+R+SK R TI+ E Y+ ++ +LP ++ + W + + +QQD A H N+ +L +AG W + L QPA+SPDLNV DLGFF+S+
Sbjct: 90 ASYTRPLLSDQHKKDRVDYCKRYVEPLLD---DMYDCVHVDEKWFYVTRTKIRFYLWPDEELPHR-CVENKGHIEKVMFLYAVARP--REGWNGKVGCWEITDIVTAKRTSKNRPAGTPLAVPTTINREKYRSMLMQHVLPAIQSRWIWPSGFSAGTIWIQQDNARSHVLPNDSLVL-AAGKEGSWDIRLRNQPAKSPDLNVLDLGFFNSI 293 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig121.120.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig121.120.1 >prot_P-littoralis_Contig121.120.1 ID=prot_P-littoralis_Contig121.120.1|Name=mRNA_P-littoralis_Contig121.120.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=114bp MKTAERSSKRRKRREEYEFDCTIDAEWYKDWYIEQLLPVVKKKMPWLRSKback to top mRNA from alignment at P-littoralis_Contig121:512172..512975+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig121.120.1 ID=mRNA_P-littoralis_Contig121.120.1|Name=mRNA_P-littoralis_Contig121.120.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=804bp|location=Sequence derived from alignment at P-littoralis_Contig121:512172..512975+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig121:512172..512975+ >mRNA_P-littoralis_Contig121.120.1 ID=mRNA_P-littoralis_Contig121.120.1|Name=mRNA_P-littoralis_Contig121.120.1|organism=Pylaiella littoralis U1_48|type=CDS|length=342bp|location=Sequence derived from alignment at P-littoralis_Contig121:512172..512975+ (Pylaiella littoralis U1_48)back to top |