prot_P-littoralis_Contig92.49.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig92.49.2
Unique Nameprot_P-littoralis_Contig92.49.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length203
Homology
BLAST of mRNA_P-littoralis_Contig92.49.2 vs. uniprot
Match: D7G5S5_ECTSI (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5S5_ECTSI)

HSP 1 Score: 244 bits (623), Expect = 2.680e-79
Identity = 119/171 (69.59%), Postives = 142/171 (83.04%), Query Frame = 0
Query:   30 AASSCSDLRTPLPGAYRETTELWHNDNTAEGRSDVKQWVWDNRQFRRNSPPPPPQAINSEADLTEILALAKPDSLVVVNFHATLCRASRAIEKKYKRTAAEFAGTDGQDVTFADVCFDSNRQLCERMGIRSVPHVQIFSGSCGKIADFSIAPHQYNTLTSLLADRRESVRA 200
            AAS CS++R+PLPGAYRETTELWHND  A+  +DV +WVWDNRQFR N  PP P+ + +EA+LT++LA    D LVVV FHA LC ASRA+E ++++TAAEF   D + VTFADVCFDSNRQLC+RMGI+SVPHVQIFSGS GKIADFSIAP QYNTLTSLL++RR+SV A
Sbjct:   33 AASPCSNVRSPLPGAYRETTELWHNDKAADAPTDVVEWVWDNRQFRPNPAPPAPKTVKNEAELTKLLA---SDGLVVVKFHAILCDASRAVEGRFRQTAAEFGDMDNKQVTFADVCFDSNRQLCKRMGIKSVPHVQIFSGSKGKIADFSIAPLQYNTLTSLLSERRDSVAA 200          
BLAST of mRNA_P-littoralis_Contig92.49.2 vs. uniprot
Match: D7FJA4_ECTSI (Thioredoxin/AMP-activated kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJA4_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 3.880e-40
Identity = 79/162 (48.77%), Postives = 104/162 (64.20%), Query Frame = 0
Query:   41 LPGAYRETTELWHNDNTAEGRSDVKQWVWDNRQFRRNSPPPPPQAINSEADLTEILALAKPDSLVVVNFHATLCRASRAIEKKYKRTAAEFAGTDGQDVTFADVCFDSNRQLCERMGIRSVPHVQIFSGSCGKIADFSIAPHQYNTLTSLLADRRESVRAQK 202
            LPGAY  +T LWH+D+   G +   Q V D                  E +L ++L   +P SLVVV F   LC+AS+A+E+K+K+TAAEF+  D  DV FA V   SN  LC++MG+RSVPHVQIFSG  GKIADFS+AP +Y+TL +LL +RR+S+ A K
Sbjct:   34 LPGAYNPSTALWHHDS---GETSSIQTVRD------------------ETELAQLLDATRPSSLVVVKFGKALCKASKAVEEKFKQTAAEFSECDKTDVQFASVDSGSNWLLCKKMGVRSVPHVQIFSGYNGKIADFSLAPPEYDTLDALLGERRDSMLAWK 174          
BLAST of mRNA_P-littoralis_Contig92.49.2 vs. uniprot
Match: A0A7S0J7Q1_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J7Q1_9EUKA)

HSP 1 Score: 72.4 bits (176), Expect = 4.220e-12
Identity = 31/92 (33.70%), Postives = 58/92 (63.04%), Query Frame = 0
Query:  100 KPDSLVVVNFHATLCRASRAIEKKYKRTAAEFAGTDGQDVTFADVCFDSNRQLCERMGIRSVPHVQIFSGSCGKIADFSIAPHQYNTLTSLL 191
            + + +V++ FHA+ CRA +A+  KY+R A      D  ++ F ++ FD+N++LC+ +GI+ +P+V++  G+ GK+  FS  P + + L   L
Sbjct:  111 RENKVVIIKFHASWCRACKAMAPKYQRVAE-----DWPELEFCEILFDNNKKLCKSLGIKILPYVEVIGGTLGKVEGFSCGPSKISRLQERL 197          
BLAST of mRNA_P-littoralis_Contig92.49.2 vs. uniprot
Match: A0A7S1T5P7_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T5P7_9RHOD)

HSP 1 Score: 68.9 bits (167), Expect = 6.380e-11
Identity = 36/111 (32.43%), Postives = 64/111 (57.66%), Query Frame = 0
Query:   86 INSEADLTEILALAKPDSLVVVNFHATLCRASRAIEKKYKRTAAEFAGTDGQDVTFADVCFDSNRQLCERMGIRSVPHVQIFSGSCGKIADFSIAPHQYNTLTSLLADRRE 196
            +NS  D  E+L   + ++LVV+ F A+ CRA +A+  K+ + A EF      +  F ++ +   ++LC R+G+  +PHVQ +SG  G++ DF + P   +T+  L+   R+
Sbjct:   90 LNSTEDFLEMLEEGR-NTLVVIKFFASSCRACKAVAPKFVKAAQEFP-----EFLFCEIDYAELKELCWRLGVLHLPHVQFYSGERGRVEDFDVGP---STIDKLIVKLRK 191          
BLAST of mRNA_P-littoralis_Contig92.49.2 vs. uniprot
Match: A0A7S4UFB6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UFB6_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 3.920e-7
Identity = 35/122 (28.69%), Postives = 58/122 (47.54%), Query Frame = 0
Query:   86 INSEADLTEILALAKPDSLVVVNFHATLCRASRAIEKKYKRTAAEFAGTD------GQDVTFADVCFDSNRQLCERMGIRSVPHVQIFSGSCG----------KIADFSIAPHQYNTLTSLL 191
            I+   D  + L+  + +++ VV F AT CRA +  + +Y +   ++ G D         V FADV FD N  LC+ +G+  +PHVQ++               ++  FS  P  Y+ +T  L
Sbjct:  136 ISGAGDFIDFLS-EEEETINVVRFQATWCRACKRFDLRYHKLLHDYLGEDHFANKTSVAVRFADVDFDKNHNLCDTLGVTRLPHVQMYRKKAADSGGEDDGPKRLCAFSCEPEMYHKVTDKL 256          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig92.49.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G5S5_ECTSI2.680e-7969.59Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
D7FJA4_ECTSI3.880e-4048.77Thioredoxin/AMP-activated kinase n=1 Tax=Ectocarpu... [more]
A0A7S0J7Q1_9EUKA4.220e-1233.70Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S1T5P7_9RHOD6.380e-1132.43Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S4UFB6_9STRA3.920e-728.69Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 98..176
e-value: 7.3E-10
score: 38.8
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 74..196
score: 9.053587
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 82..196
e-value: 9.8E-16
score: 59.6
NoneNo IPR availablePANTHERPTHR43601THIOREDOXIN, MITOCHONDRIALcoord: 70..190
NoneNo IPR availablePANTHERPTHR43601:SF10THIOREDOXIN-LIKE 2-2, CHLOROPLASTICcoord: 70..190
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..34
score: 5.0
NoneNo IPR availableCDDcd02947TRX_familycoord: 90..192
e-value: 5.01288E-12
score: 57.5681
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 76..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig92contigP-littoralis_Contig92:247987..255519 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig92.49.2mRNA_P-littoralis_Contig92.49.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig92 247628..256950 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig92.49.2 ID=prot_P-littoralis_Contig92.49.2|Name=mRNA_P-littoralis_Contig92.49.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=203bp
MMNHALRLASRGRLQLSTAKAISFTTASTAASSCSDLRTPLPGAYRETTE
LWHNDNTAEGRSDVKQWVWDNRQFRRNSPPPPPQAINSEADLTEILALAK
PDSLVVVNFHATLCRASRAIEKKYKRTAAEFAGTDGQDVTFADVCFDSNR
QLCERMGIRSVPHVQIFSGSCGKIADFSIAPHQYNTLTSLLADRRESVRA
QK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf