mRNA_P-littoralis_Contig92.48.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig92.48.1 vs. uniprot
Match: D7G5S6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5S6_ECTSI) HSP 1 Score: 373 bits (957), Expect = 1.230e-129 Identity = 182/215 (84.65%), Postives = 184/215 (85.58%), Query Frame = 1
Query: 22 MVDGGSYISIGDMYKGNNIILPDRWKGKGFSVPQLPKNAENGNFSRLEYKSEPYADMEKFSKTQPLDKRKLGFGTKDAFRPGEFTATIRTEQYRDLLRAEKATXXXXXXXXXXXXXXXXXXXXXAEQRTFPDGLKEIEHLYDVGRGQVTEFDPKHSRDRFYTLSIDQEKRRGPYRTMAQDIGDGAWGHKYQSPEHGPIHHVKFFYDKSHLSLPQS 666
MVDGGSYISIGDMYKGN IILPDRWKGKG SVPQLPKNAENGNFSRLEY+SEPYADMEKFSKTQPLDKRKLGFGTKDAFRPGEFTATIRTEQYRDLLRAEK AE R FPDGLKEIEHLYDVGR QVTEFDPK+SRDRFYTLSI QEKRRGPYRTMAQDIG GAWGH YQSPEHGPIHHVKFFYDKSHLSLPQS
Sbjct: 1 MVDGGSYISIGDMYKGNKIILPDRWKGKGLSVPQLPKNAENGNFSRLEYRSEPYADMEKFSKTQPLDKRKLGFGTKDAFRPGEFTATIRTEQYRDLLRAEKNIMEKHRDPAKDQAAAQKYEKDCAEHRAFPDGLKEIEHLYDVGRSQVTEFDPKNSRDRFYTLSIGQEKRRGPYRTMAQDIGSGAWGHTYQSPEHGPIHHVKFFYDKSHLSLPQS 215
BLAST of mRNA_P-littoralis_Contig92.48.1 vs. uniprot
Match: A0A836CAI9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAI9_9STRA) HSP 1 Score: 264 bits (675), Expect = 1.270e-86 Identity = 132/219 (60.27%), Postives = 157/219 (71.69%), Query Frame = 1
Query: 1 TQRLNKNMVDGGSYISIGDMYKGNNIILPDRWKGKGFSVPQLPKNAENGNFSRLEYKSEPYADMEKFSKTQPLDKRKLGFGTKDAFRPGEFTATIRTEQYRDLLRAEKATXXXXXXXXXXXXXXXXXXXXXAEQRTFPDGLKEIEHLYDVGRGQVTEFDPKHSRDRFYTLSIDQEKRRGPYRTMAQDIGDGAWGHKYQSPEHGPIHHVKFFYDKSHLSL 657
T+R+N + +G YIS+GD Y+G LP RWKGKGF V Q+P NAENGNFS+LEYKS + +ME++SKTQP RK GFGTKDAFR GEFTATIRTEQYRD LR E+ RTF +GL E +HLYDVGR QVT+FDPKHSRDRFYT I++E+R G +RTMAQDIGDGAW HKY+SPE GPIHH K F+D+SHL++
Sbjct: 4 TKRVNDKIAEG--YISVGDPYRGTKDTLPGRWKGKGFKVLQVPVNAENGNFSKLEYKSCAFQEMERYSKTQP--DRKKGFGTKDAFRRGEFTATIRTEQYRDQLRKEQTIMAKFCDPVRDSEIIRRAEEKQRSTRTFCEGLPETDHLYDVGRTQVTKFDPKHSRDRFYTPDINRERRMGGFRTMAQDIGDGAWSHKYKSPEFGPIHHTKLFWDRSHLTV 218
BLAST of mRNA_P-littoralis_Contig92.48.1 vs. uniprot
Match: D7FNL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNL0_ECTSI) HSP 1 Score: 230 bits (586), Expect = 6.730e-73 Identity = 114/219 (52.05%), Postives = 143/219 (65.30%), Query Frame = 1
Query: 1 TQRLNKNMVDGGSYISIGDMYKGNNIILPDRWKGKGFSVPQLPKNAENGNFSRLEYKSEPYADMEKFSKTQPLDKRKLGFGTKDAFRPGEFTATIRTEQYRDLLRAEKATXXXXXXXXXXXXXXXXXXXXXAEQRTFPDGLKEIEHLYDVGRGQVTEFDPKHSRDRFYTLSIDQEKRRGPYRTMAQDIGDGAWGHKYQSPEHGPIHHVKFFYDKSHLSL 657
T+R+NKN+V+G +IS+GD YK LP RWKGK F P NA+NGNF++L+Y SEP+ + E+F+KTQPL KR LGFGTKDAF+ GEFTATIRT+QYR++LR E+ A R F +G +EI+HLYDVGR EF+P D FY KR GPYRTMAQDIG+ AW H+ +PE GPI H+K FYD+SHL +
Sbjct: 4 TKRVNKNIVEGNRFISVGDPYKELRR-LPGRWKGKQFQTEGCPANADNGNFAKLKYSSEPFQETERFTKTQPLSKRNLGFGTKDAFKRGEFTATIRTQQYREMLRQEQRLMNASRNVKDEREKVAQAKAKHASSRRFVEGKEEIKHLYDVGRSLQNEFNPYRKHDAFYDFQKSTGKRMGPYRTMAQDIGNMAWDHRPTAPEFGPIGHIKNFYDRSHLEV 221
BLAST of mRNA_P-littoralis_Contig92.48.1 vs. uniprot
Match: A0A6V1R9I1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1R9I1_HETAK) HSP 1 Score: 201 bits (510), Expect = 1.410e-61 Identity = 108/217 (49.77%), Postives = 132/217 (60.83%), Query Frame = 1
Query: 1 TQRLNKNMVDGGSYISIGDMYKGNNIILPDRWKGKGFSVPQLPKNAENGNFSRLEYKSEPYADMEKFSKTQPLDKRKLGFGTKDAFRPGEFTATIRTEQYRDLLRAEKATXXXXXXXXXXXXXXXXXXXXXAEQRTFPDGLKEIEHLYDVGRGQVTEFDPKHSRDRFYTLSIDQEKRRGPYRTMAQDIGDGAWGHKYQSPEHGPIHHVKFFYDKSHL 651
T+R+NKN +D SYISI D Y N LP RWK K F+V LP G F++ Y +PY + F K QP D RKLGFGTKDA + GEFTATIRTEQYR+ L+ E+ E+R+FP+GL E LYD+GR VT+FDP+ SRD FYTL D+ KR G ++T A +G GAW H+Y PE GPI +VK FYDK HL
Sbjct: 4 TKRINKNKIDV-SYISIQDPYVENRK-LPPRWKEKQFAVAHLPNPENGGYFAKKTYAPDPYKEAVHFIKEQPADSRKLGFGTKDASKRGEFTATIRTEQYRETLKKEQRILDHQRDPAAETMTLERARKR-EEERSFPEGLSETRRLYDIGRQNVTDFDPRQSRDTFYTLRKDRPKRLGHHQTAAAAVGSGAWDHEYSKPEFGPIPYVKNFYDKGHL 217
BLAST of mRNA_P-littoralis_Contig92.48.1 vs. uniprot
Match: A0A7S2XZN8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZN8_9STRA) HSP 1 Score: 199 bits (506), Expect = 6.030e-61 Identity = 103/220 (46.82%), Postives = 133/220 (60.45%), Query Frame = 1
Query: 1 TQRLNKNMVD-GGSYISIGDMYKGNNIILPDRWKGKGFSVPQLPKNAENGNFSRLEYKSEPYADMEKFSKTQPLDKRKLGFGTKDAFRPGEFTATIRTEQYRDLLRAEKATXXXXXXXXXXXXXXXXXXXXXAEQRTFPDGLKEIEHLYDVGRGQVTEFDPKHSRDRFYTLSIDQEKRRGPYRTMAQDIGDGAWGHKYQSPEHGPIHHVKFFYDKSHLSL 657
T R +KN++D SY++IGD Y N +P RWK K F V P ++G F +Y+ E Y +ME + K+QP D+RK GFG+ DA R GEFT+TIRTEQYR+ L+ E RTF +GL E HLYD+G+ QVTEFDP+ SRD FY + D+ KR G + T +Q +GDGAW HKY PE GPI +VK FYD+SHL +
Sbjct: 4 THRTHKNLLDKDASYVTIGDPYIDPNRTIPPRWKEKQFVVQHKPALKQSGYFEEFKYQPEEYKEMESYLKSQPQDRRKNGFGSHDATRRGEFTSTIRTEQYRETLKQELRVHEKQRDPESERKVMAIAAEREMG-RTFTEGLTETRHLYDIGKKQVTEFDPRSSRDTFYVMRKDRPKRLGAHTTSSQAVGDGAWDHKYTKPEFGPIPYVKNFYDRSHLQI 222
BLAST of mRNA_P-littoralis_Contig92.48.1 vs. uniprot
Match: F0YHZ6_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHZ6_AURAN) HSP 1 Score: 182 bits (463), Expect = 2.230e-54 Identity = 106/226 (46.90%), Postives = 130/226 (57.52%), Query Frame = 1
Query: 1 TQRLNKNM-VDGGSYISIGDMYKGNNIILPDRWKGKGFSVPQLPKNAENGNFS----RLEYKSEPYADMEKFSKTQPLDKRKLGFGTKDAFRPGEFTATIRTEQYRDLLRAEKATXXXXXXXXXXXXXXXXXXXXXAEQRTFPDGLKEIEHLYDVGRGQVTEFDPKHSRDRFYTLS--IDQEKRRGPYRTMAQDIGDGAWGHKYQSPEHGPIHHVKFFYDKSHLSL 657
T+ +NKN+ VD G YI++GD Y G LP RWK K F VPQ+P NA G F Y+SE Y + + KTQP DKRKLGFGT DA R EF+ TIRTEQYR+ L+ E A+ + F + KEI +LYDVGR TEFDPK+ RD+FY++ EKR G RT +QDIGDGAW KY PE VK F+D+SHL +
Sbjct: 4 TKFMNKNVTVDNGRYITVGDPYIGTKDKLPLRWKEKQFHVPQVPSNAGEGYFGFSGKAFSYQSELYTEQRPYMKTQPPDKRKLGFGTHDASRRDEFSQTIRTEQYRETLKKEGRANNNGYDEDAIEELMKKEN---AKVKKFVETKKEIGNLYDVGRSIHTEFDPKNGRDQFYSMKHGYTYEKRMGNNRTASQDIGDGAWNFKYSKPEFSAPSQVKNFFDQSHLDI 226
BLAST of mRNA_P-littoralis_Contig92.48.1 vs. uniprot
Match: A0A7S2EF12_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EF12_TRICV) HSP 1 Score: 160 bits (406), Expect = 1.230e-45 Identity = 90/222 (40.54%), Postives = 125/222 (56.31%), Query Frame = 1
Query: 37 SYISIGDMYKGNNIILPDRWKGKGFSVPQLPKNAENGNFSRLEYKSEPYADM-EKFSKTQPLDKRKLGFGTKDAFRPGEFTATIRTEQYRDLLRAEKATXXXXXXXXXXXXXXXXXXXXXAEQRTFPDG-----LKEIEHLYDVGRGQVTEFDPKHSRDRFYTL-----------SIDQEKRRGPYRTMAQDIGDGAWGHKYQSPEHGPIHHVKFFYDKSHL 651
+Y SIGD Y+ + LP RWK K F P+ PKNA NG F + +Y +PY + E++SKTQPL+KR+LGFG+ DAF+PGEFT+ TE+YR+++R E+ RT P LKE + LYDVGR VT + P+ +RD FY L +D +R G +R M+ IG+ AW HKY PE G + +++ FYD+ H+
Sbjct: 18 TYTSIGDPYRNSVEELPSRWKKKQFVTPKCPKNAYNGLFVKPQYTPDPYTERAEQYSKTQPLEKRRLGFGSHDAFKPGEFTSDKATERYRNVVRQEQKLLDSVRDEMRERELIQKLRD---RPRTTPKDKLGKDLKEPKFLYDVGRTHVTLYSPQSTRDSFYKLPKHAPVDPKLKGLDPIRRLGSHRPMSASIGEQAWRHKYAKPEFGQVKYIEKFYDRGHI 236
BLAST of mRNA_P-littoralis_Contig92.48.1 vs. uniprot
Match: A0A8J2SVQ1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SVQ1_9STRA) HSP 1 Score: 148 bits (373), Expect = 2.270e-40 Identity = 88/221 (39.82%), Postives = 109/221 (49.32%), Query Frame = 1
Query: 28 DGGSYISIGDMYKGNNIILPDRWKGKGFSVPQLPKNAENGNFSRLE----YKSEPYADMEKFSKTQPLDKRKLGFGTKDAFRPGEFTATIRTEQYRDLLRAEKATXXXXXXXXXXXXXXXXXXXXXAEQRTFPD-------GLKEIEHLYDVGRGQVTEFDPKHSRDRFYTL--SIDQEKRRGPYRTMAQDIGDGAWGHKYQSPEHGPIHHVKFFYDKSHL 651
+ G YISIGD Y LP RWK K PKNA NG F + Y + Y + ++KTQP D RKLGFGT DA + EFT +RTEQYRDLL+ EK + + GL LYD+GR + T+FDPK D FY + +E RRG YR+M+QDIGDGAW + + G H FY KSH+
Sbjct: 43 EAGRYISIGDPYVDEAERLPARWKEKQMGTTMYPKNAGNGYFGNMGKPFMYMPDKYVEQLPYAKTQPYDTRKLGFGTHDASKRDEFTDRVRTEQYRDLLKREKRILQRNEQKRGGLAEQIRKAHKKLAEAAVEEERQREVCGLSAAPFLYDIGRSRETQFDPKTKTDCFYNAYQARKREMRRGGYRSMSQDIGDGAWDLQQKRETFGRSHATAAFYSKSHI 263
BLAST of mRNA_P-littoralis_Contig92.48.1 vs. uniprot
Match: A0A8K1FR81_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FR81_PYTOL) HSP 1 Score: 135 bits (340), Expect = 6.570e-36 Identity = 90/228 (39.47%), Postives = 121/228 (53.07%), Query Frame = 1
Query: 1 TQRLNKNMVDGGSYISIGDMYKGNNIILPDRWKGKGFSVPQLP-KNAENG--NFSRLEYKSEPYADMEKFSKTQPLDKRKLGFGTKDAFRPGEFTATIRTEQYRDLLRAEKATXXXXXXXXXXXXXXXXXXXXXAEQRTFPDGLKEIEHLYDVGRGQVTEFDPKHSRDRFYTL---SIDQEKRRGPYRTMAQDIGDGAWGHKYQSPEHGPIHHVKFFYDKSHLSLPQS 666
T+ LNKN+ GSY++IGD Y+ ++I + KG + +P KN NG F + Y S+P D + KTQP+DKRK GFG+KDA R EF + +RTEQYR+ L E EQRTFP+GL E + LYD+GR Q TEF+ K RD FYT+ + ++ GP+ ++ IG GA P K FYD+SHL + QS
Sbjct: 4 TKVLNKNIA--GSYLTIGDPYRDPHLIDGKGPRHKGKQMTTIPAKNTCNGIGYFEKKTYSSDPLQDTTMYLKTQPMDKRKSGFGSKDASRREEFMSHVRTEQYRETLTKEMEIVDKQKKALSEEGRFEELEAL-EEQRTFPEGLTETKFLYDIGRTQNTEFNQKSHRDTFYTMRTGNSQYKRNNGPFMLTSESIGIGADDVSNNRPTPKGAS-TKQFYDRSHLHVGQS 227
BLAST of mRNA_P-littoralis_Contig92.48.1 vs. uniprot
Match: B8BXP8_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXP8_THAPS) HSP 1 Score: 133 bits (334), Expect = 5.320e-35 Identity = 76/203 (37.44%), Postives = 107/203 (52.71%), Query Frame = 1
Query: 37 SYISIGDMYKGNNIILPDRWKGKGFSVPQLPKNAENGNFSRLEYKSEPYADM-EKFSKTQPLDKRKLGFGTKDAFRPGEFTATIRTEQYRDLLRAEKATXXXXXXXXXXXXXXXXXXXXXAEQRTFPDG-LKEIEHLYDVGRGQVTEFDPKHSRDRFYTL-----------SIDQEKRRGPYRTMAQDIGDGAWGHKYQSPEH 606
+Y SIGD Y GN LP RWK K F + PKNA+NG F +L+Y+S+PY ++ E++SKTQPLD RKLGFG++D + GEFT T++YR +++ E R LK + ++D+GR VT ++P + D FY L D +R G +R + IG+ AW + YQ PEH
Sbjct: 18 TYTSIGDPYNGNGERLPGRWKEKQFFTQKHPKNADNGFFVKLKYQSDPYTEISEQYSKTQPLDSRKLGFGSRDVSKSGEFTCYKATQRYRSVVKQENKLLQLHRNDSKEKELLGKPKDPTLPPRDRNGRELKSAKFMFDIGRSCVTAYNPNSAYDSFYNLPKHAPVESNWQGNDPIRRLGSHRPSSTTIGEHAWKYGYQKPEH 220 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig92.48.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig92.48.1 >prot_P-littoralis_Contig92.48.1 ID=prot_P-littoralis_Contig92.48.1|Name=mRNA_P-littoralis_Contig92.48.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=216bp MVDGGSYISIGDMYKGNNIILPDRWKGKGFSVPQLPKNAENGNFSRLEYKback to top mRNA from alignment at P-littoralis_Contig92:241989..246224- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig92.48.1 ID=mRNA_P-littoralis_Contig92.48.1|Name=mRNA_P-littoralis_Contig92.48.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4236bp|location=Sequence derived from alignment at P-littoralis_Contig92:241989..246224- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig92:241989..246224- >mRNA_P-littoralis_Contig92.48.1 ID=mRNA_P-littoralis_Contig92.48.1|Name=mRNA_P-littoralis_Contig92.48.1|organism=Pylaiella littoralis U1_48|type=CDS|length=648bp|location=Sequence derived from alignment at P-littoralis_Contig92:241989..246224- (Pylaiella littoralis U1_48)back to top |