mRNA_P-littoralis_Contig92.46.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig92.46.3
Unique NamemRNA_P-littoralis_Contig92.46.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig92.46.3 vs. uniprot
Match: D7G5S4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5S4_ECTSI)

HSP 1 Score: 309 bits (792), Expect = 1.860e-95
Identity = 155/188 (82.45%), Postives = 173/188 (92.02%), Query Frame = 3
Query: 1218 QSMINYLLVFPVVAAIVVGYVQSLHRPMLEVLGLVDLHYVVGALLFLVAVMGLLAGHLRHHLLLQVYMAGLCVVLMLYIALISLGLVSWGKLADGFDNHELKDITRMACEVGVHGCCCCRFTDEIDLGLYKVPGCPEWSDPQELAQVAIVFVKLGLLTSIMSLVFVLCGLWASLVFHNNLKGYQVEYI 1781
            QSMINYLLVFPVV AIV+GYVQSLHRPMLEVLGLVDLHYVVGALL +VAVMG+LAGHLRHHLLLQVYMAGL  VLMLY+ LI+LGLVSW +LADGFD  + + + R+ACEVGVHGCCCCR+T E+D  LY VPGCPEWSDP+ELAQVAIVFVKLGLLTS+MS+VFVLCGLWAS++FHNNLKGYQV+YI
Sbjct:    2 QSMINYLLVFPVVGAIVMGYVQSLHRPMLEVLGLVDLHYVVGALLLVVAVMGVLAGHLRHHLLLQVYMAGLGAVLMLYLVLITLGLVSWARLADGFDPDDPEGLVRIACEVGVHGCCCCRYTPELDFSLYTVPGCPEWSDPKELAQVAIVFVKLGLLTSVMSVVFVLCGLWASVMFHNNLKGYQVDYI 189          
BLAST of mRNA_P-littoralis_Contig92.46.3 vs. uniprot
Match: D7G5S3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5S3_ECTSI)

HSP 1 Score: 194 bits (493), Expect = 2.520e-54
Identity = 91/113 (80.53%), Postives = 97/113 (85.84%), Query Frame = 3
Query:  738 MGCFQTVVAVIGIVAADKVSLHMMVFYFWLVALVIGSMFMWSIAALDFHSNFRVWLDKHWDEPALENVRDRLCLNGTASAECAVPPAGFPHGSPELWCQAKYDSDDCSAIKAE 1076
            MGCFQ             VSLHMMVFYFWLV+LVIGSMFMWSIAALDFH NFRVWLDKHWD+PAL NVRDRLCLNGTAS +CAVPPAGFPHGSP+LWCQAKYDSD+C+AIKAE
Sbjct:    1 MGCFQ-------------VSLHMMVFYFWLVSLVIGSMFMWSIAALDFHFNFRVWLDKHWDDPALANVRDRLCLNGTASDQCAVPPAGFPHGSPDLWCQAKYDSDECTAIKAE 100          
BLAST of mRNA_P-littoralis_Contig92.46.3 vs. uniprot
Match: A0A7S2R9T0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9T0_9STRA)

HSP 1 Score: 155 bits (392), Expect = 4.750e-37
Identity = 126/427 (29.51%), Postives = 206/427 (48.24%), Query Frame = 3
Query:  579 RNWLIALNSFSMTSGLVLA-TSAVSLLLFTRRVREDEADGTDSTVYSTAVALAVMGCFQTVVAVIGIVAADKVSLHMMVFYFWLVALVIGSMFMWSIAALDFHSNFRVWLDKHWDEPALENVRDRLCLNGTAS-AECAVPPAGFPHG------SPELWCQAKYDSDDCSAIKAEAVDKAMDFLSLFMNVAGGLSVSSVVEMLASLILTVRVVTIPIIMRSVQSMINYLLVFPVVAAIVVGYVQSLHR---------------PMLEVLGLVDLHYVVGALLFLVAVMGLLAGHLRHHLLLQVYMAGLCVVLMLYIALISLGLVSWG---KLADGFDNHELKDITRMACEVGVHGCCCCRFTDEIDLGLYKVPGCPEWSDPQELAQVAIVFVKLGLLTSIMSLVFVLCGLWASLVFHNNLKGYQVEYI 1781
            R WLI  N   +   L +A  SA  +    +   E   D  D+ +Y   +A+AV+GC   + AV+GI  A KVSL M+V YFWL  L++    ++S+   +F   FR W+   WD P + +VR   C   + S  +CAV P   P        + + WC+  +++ DC  I  EA D+   F    +      S   ++ +  SL L  R+VT+ II +S+  +INY ++ P +A ++VG                      P ++ +G   L    G ++    ++G+ AG  +    L +Y+ G+ VV  L   L++ G+ ++     L   F + + K   + AC+  ++ CCCC   D +D+       CPEW+  +E+  V  V++KL  L   +SLVFV  G+ ++ +   NLK Y+ EYI
Sbjct:   13 RQWLILTNCLILICSLFIAGVSAYVINEIYKETFERSTDQEDTMLYFW-IAMAVLGCLHGLCAVVGITGALKVSLDMIVTYFWLAVLLLAPTLLFSVLMFEFQKLFRSWIKHRWDTPEMSSVRRSFCKPRSVSDTKCAVYPPSLPFKYNITDYTVDEWCEDFWNATDCRLIYIEATDQVTVFAEQALTATATASAVEILLLFFSLYLAYRIVTMSIITKSMNELINYFMILPAIAILLVGLDLKGDLSPTGDNDGSDFAEIDPAIDSIG--TLFVSAGVIILGFTLVGIFAGRAKRRRYLYLYLVGMTVVFAL---LLTCGIWAYQISFTLHLSFTDSQFKT-QQFACDAHLYNCCCCG-EDVVDV-------CPEWTK-EEVIDVVEVYLKLAGLCGFVSLVFVSGGVMSAYLLAKNLKEYKCEYI 423          
BLAST of mRNA_P-littoralis_Contig92.46.3 vs. uniprot
Match: A0A7S2R9V5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9V5_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 1.510e-16
Identity = 84/308 (27.27%), Postives = 143/308 (46.43%), Query Frame = 3
Query:  933 ENVRDRLCLNGTAS-AECAVPPAGFPHG------SPELWCQAKYDSDDCSAIKAEAVDKAMDFLSLFMNVAGGLSVSSVVEMLASLILTVRVVTIPIIMRSVQSMINYLLVFPVVAAIVVGYVQSLHR---------------PMLEVLGLVDLHYVVGALLFLVAVMGLLAGHLRHHLLLQVYMAGLCVVLMLYIALISLGLVSWG---KLADGFDNHELKDITRMACEVGVHGCCCCRFTDEIDLGLYKVPGCPEWSDPQELAQVAIVFVKLGLLTSIMSLVFVLCGLWASLVFHNNLKGYQVEYI 1781
            E  R   C   + S  +CAV P   P        + + WC+  +++ DC  I  EA D+   F    +      S   ++ +  SL L  R+VT+ II +S+  +INY ++ P +A ++VG                      P ++ +G   L    G ++    ++G+ AG  +    L +Y+ G+ VV  L   L++ G+ ++     L   F + + K   + AC+  ++ CCCC   D +D+       CPEW+  +E+  V  V++KL  L   +SLVFV  G+ ++ +   NLK Y+ EYI
Sbjct:    2 EGTRRSFCKPRSVSDTKCAVYPPSLPFKYNITDYTVDEWCEDFWNATDCRLIYIEATDQVTVFAEQALTATATASAVEILLLFFSLYLAYRIVTMSIITKSMNELINYFMILPAIAILLVGLDLKGDLSPTGDNDGSDFAEIDPAIDSIG--TLFVSAGVIILGFTLVGIFAGRAKRRRYLYLYLVGMTVVFAL---LLTCGIWAYQISFTLHLSFTDSQFKT-QQFACDAHLYNCCCCG-EDVVDV-------CPEWTK-EEVIDVVEVYLKLAGLCGFVSLVFVSGGVMSAYLLAKNLKEYKCEYI 294          
BLAST of mRNA_P-littoralis_Contig92.46.3 vs. uniprot
Match: A0A8K1C801_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C801_PYTOL)

HSP 1 Score: 87.8 bits (216), Expect = 1.480e-14
Identity = 95/402 (23.63%), Postives = 172/402 (42.79%), Query Frame = 3
Query:  714 STAVALAVMGCFQTVVAVIGIVAADKVSLHMMVFYFWLVALVIGSMFMWSIAALDFHSNFRVWLDKHWDEPALENVRDRLCLNGTASAECAVPPAGFPHGSPELWCQAKYDSDDCSAIKAEAVDKAMDFLSLFMNVAGGLSVSSVVEMLASLILTVRVVTIPIIMRSVQSMINYLLVFPVVAAIVVGY---VQSLHRPMLEVLGLVDLHYVVGALLFLVAVMGLLAGHLRHHLLLQVYMAGL--CVVLMLYIALISLGLVSWGKLADGFDNHELKDITRMACEVGVHGCCCCR------------------------------------FTDEIDLG-----LYKVPGCPEWSDPQELAQVAIVFVKLGLLTSIMSLVFVLCGLWASLVFHNNLKGYQVEYI 1781
            ++A ALA +G F  + +V+G V A +    M++ YF+L   +I  +F+ S +A+ F  +   WL  HW  P L+ +R + C                                       E  D+A+ +L     + G L    ++ +LA++   +R+VT+PI+M+++ ++IN+  +F V+   + GY   V+S          +  +  VVG L+F ++V+G++A   +   +L +Y+ G+  C V +L  A  +       KLAD ++  + +D+  MAC++G+ GC  C                                          D G     + +   CPEWS     A +      LGL  +++   F++ G  A+ +   +L GYQ + I
Sbjct:   37 ASAAALASIGAFVVLFSVLGFVGAGREKSAMLMLYFFLNFFLITCLFISSYSAIAFQDSLESWLKIHWKHPVLDYLRTKPCC--------------------------------------ENYDEAVSYLESKFLILGALGFVCLLLVLAAMYCVIRIVTVPIVMKNLLTVINF--IFIVLGTGIFGYGCAVKSKDELTSGQEWIAIMFIVVGTLIFALSVIGIIASRSKSRTMLLIYIVGIGACFVALLVCAGAAFSFSD--KLADNYNASQHRDV--MACDIGLSGCTNCTDVPSEMVPCLGVTMDNDGIVHSCNATTAKCQQGWTLLNSPEDQGKTTNDIAECGKCPEWSQEDVHAYLKSGLQLLGLSAAVVCF-FIIVGCAAAFILRKSLAGYQTDSI 393          
BLAST of mRNA_P-littoralis_Contig92.46.3 vs. uniprot
Match: K3XBP0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XBP0_GLOUD)

HSP 1 Score: 75.1 bits (183), Expect = 2.120e-10
Identity = 93/408 (22.79%), Postives = 168/408 (41.18%), Query Frame = 3
Query:  711 YSTAVALAVMGCFQTVVAVIGIVAADKVSLHMMVFYFWLVALVIGSMFMWSIAALDFHSNFRVWLDKHWDEPALENVRDRLCLNGTASAECAVPPAGFPHGSPELWCQAKYDSDDCSAIKAEAVDKAMDFLSLFMNVAGGLSVSSVVEMLASLILTVRVVTIPIIMRSVQSMINYLLVFPVVAAIVVGY---VQSLHRPMLEVLGLVDLHYVVGALLFLVAVMGLLAGHLRHHLLLQVYMAGLCVVLMLYIALISLGLVSWGKLADGFDNHELKDITRMACEVGVHGCCCCRFT-DEIDL--GLYK--------------------------------------------VPG-CPEWSDPQELAQVAIVFVKLGLLTSIMSLVFVLCGLWASLVFHNNLKGYQVEYI 1781
            +++AVALA +G    +++ +G V A +    M++ +F+L   ++  +F+ S AA  F      WL  HW +  L+ +R + C                                 CS  +         F++L     G +  + +  +LASL   +R+VT+PI+M+++ ++IN+  +F  + A V  Y   V+S          +  +   VG  +  ++V+G++    +   LL +Y+ G+   L+  +     G    G+LA  ++ H  ++ + +AC++ + GC  C    DEI    G+ K                                            V G CPEWS+P   A +      LGL   I+S  F++ G   +L+   +L GYQ + I
Sbjct:   36 HASAVALASLGGIVVLLSTLGFVGAGREKSGMLMLFFFLNFFLVTCLFVASYAAFCFQDAMESWLKHHWSDEVLDYLRSKPC---------------------------------CSTYEDTVTYLEHKFMTL-----GAIGFACIALVLASLYCVIRIVTVPIVMKNMLTVINF--IFIALGAGVFAYGLTVKSRDEMTAGQEWIAIVFITVGTFIVALSVLGVIGARAKSRTLLLIYILGIGACLLALLTCAVGGFTFSGELAKTYEKHASEN-SSLACDIDLPGCSNCSVVPDEIVACKGVRKSSDGYWVSCSSSXXXXXXSDSTCQRGMTVLNTKENQGYEANDIAVCGKCPEWSEPDVTAYLKSTLNLLGLFAVIVSF-FIVVGFAGALILRKSLAGYQTDSI 401          
BLAST of mRNA_P-littoralis_Contig92.46.3 vs. uniprot
Match: A0A2D4BE20_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BE20_PYTIN)

HSP 1 Score: 69.3 bits (168), Expect = 1.450e-8
Identity = 84/400 (21.00%), Postives = 167/400 (41.75%), Query Frame = 3
Query:  714 STAVALAVMGCFQTVVAVIGIVAADKVSLHMMVFYFWLVALVIGSMFMWSIAALDFHSNFRVWLDKHWDEPALENVRDRLCLNGTASAECAVPPAGFPHGSPELWCQAKYDSDDCSAIKAEAVDKAMDFLSLFMNVAGGLSVSSVVEMLASLILTVRVVTIPIIMRSVQSMINYLLVFPVVAAIVVGY---VQSLHRPMLEVLGLVDLHYVVGALLFLVAVMGLLAGHLRHHLLLQVYMAGLCVVLMLYIALISLGLVSWGKLADGFDNHELKDITRMACEVGVHGCCCCR-----------------------------------FTDEID------LGLYKVPGCPEWSDPQELAQVAIVFVKLGLLTSIMSLVFVLCGLWASLVFHNNLKGYQVEYI 1781
            ++A ALA +G F  + +++G V A +    +++ YF+L   +   +F+ S AAL F  +   WL +HW  P L+ +R + C +                                        +  + +L     + G +  + +  +LA++   VR+VT+PI+M+++ +++N  ++F V+ A +  Y   V+S          +  L  V+G  +F ++V+G++    +   +L +Y+ G+   L+  I           +LA  +D +     +R+AC++ + GC  C                                      + ++      + + +   CPEW+     A +      LGLL +I+S  F++ G  A+L+   +L GYQ + I
Sbjct:   37 ASAAALASIGAFVVLFSLLGFVGAGRDKSQLLMLYFFLNFFLATCLFLSSYAALSFQHSLESWLKRHWGHPVLDYLRAQPCCH--------------------------------------TYETTVAYLENQFVLLGAVGFACLALVLAAMYCVVRIVTVPIVMKNLLTVLN--VIFIVLGAGLFTYGGVVKSKDELTSGQDWIAVLFIVIGTFIFALSVIGIIGSRSKSRTMLLIYIVGIGGCLVALIVCAGAAFSFSDRLAAQYDAN--LHTSRIACDIELPGCTNCTDIAANVVPCTGVTKLANGTWAACDAETAKCRDGWTLLNPVEDQGYTPIDIAECGKCPEWTKEDVHAYLKFGLHLLGLLAAIVSF-FIIVGFGAALILRKSLAGYQTDSI 393          
BLAST of mRNA_P-littoralis_Contig92.46.3 vs. uniprot
Match: A0A3F2RM06_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RM06_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.180e-7
Identity = 71/300 (23.67%), Postives = 136/300 (45.33%), Query Frame = 3
Query:  702 STVYSTAVALAVMGCFQTVVAVIGIVAADKVSLHMMVFYFWLVALVIGSMFMWSIAALDFHSNFRVWLDKHWDEPALENVRDRLCLNGTASAECAVPPAGFPHGSPELWCQAKYDSDDCSAIKAEAVDKAMDFLSLFMNVAGGLSVSSVVEMLASLILTVRVVTIPIIMRSVQSMINYLLVFPVVAAIVVGYVQSLHRPMLEVLGLVDLHY-VVGALLFLVAVMGLLAGHLRHHLLLQVYMAGL--CVVLMLYIALISLGLVSWGKLADGFDNHELKDITRMACEVGVHGCCCCRFTDEI 1592
            S V ++A AL+ +G    ++A++G V A +    +++ +F+L  L++  +F+   AA  F      W+  HW    L  +R++ C        CA                                DK +D+L   + V G + V  ++ ++A++   VR+VT+PI+MRS+ S+ N + V       + G    +H  M      + + + VVG L+  ++V+G++    +   LL +Y+ GL  C++ +L  ++ +        LA  ++ H    +   AC++ + GC  C  TD +
Sbjct:   33 SHVGASAAALSGLGGCVVLLALLGFVGAGRDKSRLLLLFFFLNFLLLTGLFVACYAAFFFRDALESWVKHHWSSDVLAALREKEC--------CAT------------------------------YDKTVDYLEHQLVVVGAVGVVCMLLVVAAMYCVVRIVTVPIVMRSMLSVTNAVFVLLGTGLFIFGLSVKVHDEMTSGQRWIAIIFIVVGTLMVALSVLGIVGSRAKSRSLLLIYVIGLGSCLIALLVCSVSAFSFSD--NLASTYNAHTSSTL---ACDINLSGCTNC--TDSV 287          
BLAST of mRNA_P-littoralis_Contig92.46.3 vs. uniprot
Match: A0A2P4WWC0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WWC0_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 4.490e-7
Identity = 87/409 (21.27%), Postives = 162/409 (39.61%), Query Frame = 3
Query:  714 STAVALAVMGCFQTVVAVIGIVAADKVSLHMMVFYFWLVALVIGSMFMWSIAALDFHSNFRVWLDKHWDEPALENVRDRLCLNGTASAECAVPPAGFPHGSPELWCQAKYDSDDCSAIKAEAVDKAMDFLSLFMNVAGGLSVSSVVEMLASLILTVRVVTIPIIMRSVQSMINYLLVFPVVAAIVVGYVQSLHRPMLEVLGLVDLHY-VVGALLFLVAVMGLLAGHLRHHLLLQVYMAGL--CVVLMLYIALISLGLVSWGKLADGFDNHELKDITRMACEVGVHGCCCCR---------------------------------------------FTDEIDLG-----LYKVPGCPEWSDPQELAQVAIVFVKLGLLTSIMSLVFVLCGLWASLVFHNNLKGYQVEYI 1781
            ++A ALA +G    +++V+G V A +    +++ +F+   +++  +F+   AA  F      W+  HW  P L  +RD  C                        C    D              A+++L   + V G + V+ ++ ++AS+   VR+VT+PI+MRS+ S++N +         + G    +H  M      + + + VVG L+  ++V+G++    +   LL +Y+ GL  C++ +L  ++ +        LA  ++ H    +   AC++ + GC  C                                                 E D G     +     CPEWS     A +      LGL   ++ L F++ G  ++L+   +L GYQ + I
Sbjct:   37 ASAAALAALGGCVVLLSVLGFVGAGRDKSRLLLLFFFADFVLVTGLFVACYAAFFFQDALESWVKHHWTAPVLAALRDTSC------------------------CVTYSD--------------AVEYLEHRVVVIGAVGVACMLLVIASMYCVVRIVTVPIVMRSMLSVMNAVFTLLGTGLFIFGLSVKVHDEMTSGQRWIAIIFIVVGTLMVALSVLGIIGSRSKSRSLLLIYIIGLGGCLIALLVCSVSAFSFSD--HLASTYNAHTSSTL---ACDIDLPGCTNCTDVVSEMTSCEGVMHTYNGYWVSCNSTSSSVGSTSSDNGCIEGMTVLNAEADQGYEQNDIAHCGKCPEWSASDVQAYLRSTLHLLGLFAILVCL-FMIVGFGSALILRRSLAGYQTDSI 401          
BLAST of mRNA_P-littoralis_Contig92.46.3 vs. uniprot
Match: H3GVR1_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GVR1_PHYRM)

HSP 1 Score: 64.7 bits (156), Expect = 4.490e-7
Identity = 90/409 (22.00%), Postives = 162/409 (39.61%), Query Frame = 3
Query:  714 STAVALAVMGCFQTVVAVIGIVAADKVSLHMMVFYFWLVALVIGSMFMWSIAALDFHSNFRVWLDKHWDEPALENVRDRLCLNGTASAECAVPPAGFPHGSPELWCQAKYDSDDCSAIKAEAVDKAMDFLSLFMNVAGGLSVSSVVEMLASLILTVRVVTIPIIMRSVQSMINYLLVFPVVAAIVVGYVQSLHRPMLEVLGLVDLHY-VVGALLFLVAVMGLLAGHLRHHLLLQVYMAGL--CVVLMLYIALISLGLVSWGKLADGFDNHELKDITRMACEVGVHGCCCCR---------------------------------FTD------------EIDLG-----LYKVPGCPEWSDPQELAQVAIVFVKLGLLTSIMSLVFVLCGLWASLVFHNNLKGYQVEYI 1781
            ++A ALA +G    +++ +G V A +    +++ +F++  +++  +F+   AA  F      W+  HW    L  +RD  C        CA                                  A+ +L   + V G + V+ ++ +LAS+   VR+VT+PI+MRS+ S++N +         + G    +H  M      + + + VVG L+  ++V+G++    +   LL +Y+ GL  C+V +L  ++ +        LA  ++ H    +   AC++ + GC  C                                   TD            E D       + K   CPEWS     A +      LGL   ++ L F++ G  ++LV   +L GYQ + I
Sbjct:   37 ASAAALAALGGCVVLLSALGFVGAGRDKSRLLLLFFFVNFVLVTGLFVACYAAFFFQDALESWVKHHWTAHVLAALRDTSC--------CAT------------------------------YSDAVQYLEHRVAVVGAVGVACMLLVLASMYCVVRIVTVPIVMRSMLSVMNAIFTLLGTGLFIFGLSVKVHDEMTSGQRWIAIIFIVVGTLMVALSVLGIIGSRSKSRSLLLIYIVGLGGCLVALLVCSVSAFSFSD--NLASTYNAHTSSTL---ACDIDLSGCTNCTDVASEMVPCEGVMHTNDDHWVSCNTTSSSGGSTSTDSGCLEDMTILNAEADQSYEQNDIAKCGKCPEWSASDVQAYLRSTLHLLGLFAVVVCL-FMIVGFASALVLRRSLAGYQTDSI 401          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig92.46.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D7G5S4_ECTSI1.860e-9582.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G5S3_ECTSI2.520e-5480.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2R9T0_9STRA4.750e-3729.51Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2R9V5_9STRA1.510e-1627.27Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8K1C801_PYTOL1.480e-1423.63Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3XBP0_GLOUD2.120e-1022.79Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A2D4BE20_PYTIN1.450e-821.00Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
A0A3F2RM06_9STRA1.180e-723.67Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A2P4WWC0_9STRA4.490e-721.27Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
H3GVR1_PHYRM4.490e-722.00Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig92contigP-littoralis_Contig92:212746..227668 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog36331.EPrPI00000016333
PFAMsTetraspannin
Model size3065
Max annot lvl121069|Pythiales
Hectar predicted targeting categorysignal anchor
Exons14
Evalue2.21e-13
EggNOG OGs28MTJ@1|root,2QUBU@2759|Eukaryota,1MD81@121069|Pythiales
DescriptionRNA methyltransferase, TrmH family protein. Source PGD
Cds size1266
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig92.46.3prot_P-littoralis_Contig92.46.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig92 213264..226358 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791831.1015642-UTR-P-littoralis_Contig92:212745..2132631680791831.1015642-UTR-P-littoralis_Contig92:212745..213263Pylaiella littoralis U1_48UTRP-littoralis_Contig92 212746..213263 +
1680791831.2719364-UTR-P-littoralis_Contig92:226358..2273801680791831.2719364-UTR-P-littoralis_Contig92:226358..227380Pylaiella littoralis U1_48UTRP-littoralis_Contig92 226359..227380 +
1680791831.284206-UTR-P-littoralis_Contig92:227409..2276681680791831.284206-UTR-P-littoralis_Contig92:227409..227668Pylaiella littoralis U1_48UTRP-littoralis_Contig92 227410..227668 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791831.1160505-CDS-P-littoralis_Contig92:213263..2133041680791831.1160505-CDS-P-littoralis_Contig92:213263..213304Pylaiella littoralis U1_48CDSP-littoralis_Contig92 213264..213304 +
1680791831.1274185-CDS-P-littoralis_Contig92:214439..2144841680791831.1274185-CDS-P-littoralis_Contig92:214439..214484Pylaiella littoralis U1_48CDSP-littoralis_Contig92 214440..214484 +
1680791831.1386538-CDS-P-littoralis_Contig92:215167..2152401680791831.1386538-CDS-P-littoralis_Contig92:215167..215240Pylaiella littoralis U1_48CDSP-littoralis_Contig92 215168..215240 +
1680791831.1480064-CDS-P-littoralis_Contig92:215521..2155961680791831.1480064-CDS-P-littoralis_Contig92:215521..215596Pylaiella littoralis U1_48CDSP-littoralis_Contig92 215522..215596 +
1680791831.1577957-CDS-P-littoralis_Contig92:216095..2161341680791831.1577957-CDS-P-littoralis_Contig92:216095..216134Pylaiella littoralis U1_48CDSP-littoralis_Contig92 216096..216134 +
1680791831.1708617-CDS-P-littoralis_Contig92:216830..2169351680791831.1708617-CDS-P-littoralis_Contig92:216830..216935Pylaiella littoralis U1_48CDSP-littoralis_Contig92 216831..216935 +
1680791831.1817708-CDS-P-littoralis_Contig92:217529..2177091680791831.1817708-CDS-P-littoralis_Contig92:217529..217709Pylaiella littoralis U1_48CDSP-littoralis_Contig92 217530..217709 +
1680791831.1918733-CDS-P-littoralis_Contig92:221634..2217681680791831.1918733-CDS-P-littoralis_Contig92:221634..221768Pylaiella littoralis U1_48CDSP-littoralis_Contig92 221635..221768 +
1680791831.20183-CDS-P-littoralis_Contig92:222182..2222551680791831.20183-CDS-P-littoralis_Contig92:222182..222255Pylaiella littoralis U1_48CDSP-littoralis_Contig92 222183..222255 +
1680791831.2189422-CDS-P-littoralis_Contig92:223353..2234821680791831.2189422-CDS-P-littoralis_Contig92:223353..223482Pylaiella littoralis U1_48CDSP-littoralis_Contig92 223354..223482 +
1680791831.2310963-CDS-P-littoralis_Contig92:224172..2243071680791831.2310963-CDS-P-littoralis_Contig92:224172..224307Pylaiella littoralis U1_48CDSP-littoralis_Contig92 224173..224307 +
1680791831.2423334-CDS-P-littoralis_Contig92:225298..2253901680791831.2423334-CDS-P-littoralis_Contig92:225298..225390Pylaiella littoralis U1_48CDSP-littoralis_Contig92 225299..225390 +
1680791831.2611103-CDS-P-littoralis_Contig92:226213..2263581680791831.2611103-CDS-P-littoralis_Contig92:226213..226358Pylaiella littoralis U1_48CDSP-littoralis_Contig92 226214..226358 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig92.46.3

>prot_P-littoralis_Contig92.46.3 ID=prot_P-littoralis_Contig92.46.3|Name=mRNA_P-littoralis_Contig92.46.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=422bp
MVLFPRTFDAVRWRYWCSNERNWLIALNSFSMTSGLVLATSAVSLLLFTR
RVREDEADGTDSTVYSTAVALAVMGCFQTVVAVIGIVAADKVSLHMMVFY
FWLVALVIGSMFMWSIAALDFHSNFRVWLDKHWDEPALENVRDRLCLNGT
ASAECAVPPAGFPHGSPELWCQAKYDSDDCSAIKAEAVDKAMDFLSLFMN
VAGGLSVSSVVEMLASLILTVRVVTIPIIMRSVQSMINYLLVFPVVAAIV
VGYVQSLHRPMLEVLGLVDLHYVVGALLFLVAVMGLLAGHLRHHLLLQVY
MAGLCVVLMLYIALISLGLVSWGKLADGFDNHELKDITRMACEVGVHGCC
CCRFTDEIDLGLYKVPGCPEWSDPQELAQVAIVFVKLGLLTSIMSLVFVL
CGLWASLVFHNNLKGYQVEYI*
back to top

mRNA from alignment at P-littoralis_Contig92:212746..227668+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig92.46.3 ID=mRNA_P-littoralis_Contig92.46.3|Name=mRNA_P-littoralis_Contig92.46.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=14923bp|location=Sequence derived from alignment at P-littoralis_Contig92:212746..227668+ (Pylaiella littoralis U1_48)
GTCCAGCACAGCAGGCACCCGGACGGCCCACAGCCGTAAGAGCAGAGTAT TGGGACGGCATTTCTGTGGACTAGCTGTTGGCGAGCAGAGACACCATCTC ACTGCTGTTGTTGCGCATTCTGGTTCATTGGCTTGCTTTCCAATAGCAGC CGGCCCAGCTGACCCCGGGAGAAGTCTAAATACTTTCCACCGTTGAAGTA CGAAGCACCTGGTGCTGTATGACAGTATCGAAGTTATTAGTCGTTTGAGG TAACTAGAAGAACTGGTAAGCACGAAAACTTCGTAAGAAGGGCCTTGGGC TGCTGCTGCTGGCGGGAGCTGGTAGGCCAAAGCCTGCCCCCACGTGGACA TTCAGAAGGGGTATCACGCGCGTAGAGCAGCGTCGCTCAGTCGGAGCCTT GCCTGCGGCTGAGAGTGCAACCAGTTTAGAACGCGGTGCAGAAAGCACTG CTGTACAATACCGCAACTGGTAGACCCAGACGGGGCGGGCCAAGAGAGAA GAACCAAACCAACCCGGCATGGTCCTATTCCCACGGACTTTCGACGCAGT CAGATGGAGGTGAGTTGGCCTGTGTCACGATCGATGGTTCTCTGGTATTT GTTTGTGATATCTGTGCGGCTGGAGTGCCATCTGCTCAACATTGTTGTAT GTACAAAACCTGCCATCCTACTCGTACAGTATTAAGAACAGCTTTTCAAA GCATTCCTAGCAAGGCTCGAAACCCTATCTTGTCTAGTTACCGTGTAGAC TCGGAGAATTATCTGGTGTGGTGCCGGCCGCTAATCCCAATTTCGTAGGC CCGAATTCGTATGACCAATCATTTTTTTCACCATACTTCGGAGTAGGTCG GTACCCTATATTGTACTGGAATTAGATGCTTTTATCTTTTCTACCGAAAA CATCACACCCGACCGATTTTCACAGCTCAATAACTCCGCATTCGAGACAT GTTGGGGAAGAGAAAACGGGTACACGTCTGTCGTCAATGCTTCGATTGTG CGCTCTGACGCCCTCCTTGCTGTTGAGCAATCAAGCCTCGGCCATCGGCG GCGGGGGGGGCTTGTCTTACCGTCGCCATTCTGTGTGTGATCTCTCGCAC GAACACAAAACATTACTCACGCGACTATGATTCGTAGCACGGTAGAACAG CCGCTGGCATGCTCCATGGCGCTGTTGCTCGTGAGCGTAACCTGACAAAC ATCGAAGAACAAATGACACGGAAGTTGCTGCAACGCAACGCAAATTGCGG TGTGGCGCTACGAGAGCTCTTTGATCTGCAGACATGCCCGTCCATCTTTA TTCTGGAAACCGTACCCATGTTTGATATGATACCTGGTATTCATATTATA CGTATCTTTTAAATGGGCGGGCAAGTCTCGAAGAGCGACACCATCCAACG CACAACCAATGAAGCGAGCGGTTGCACTACACGGCGGTACCAGAGTGGTC GTCCGCGAACAGCGCACTTGGACAAGCCTTGGGTAGACAGCAGTTGCGAT ATCGCCTTGTCACAAGGCCATTATCATCCCGTCACAGCCAACTTGTGGGC TACAGTATCAGCCCCCCCGAACCCGCCTCAATGCTGCTGTTGCTGCTTGT TCCCTCGTGCTGCCGTGTTTTCATGCAAACCGCCTTCCCCAAACCTCCGC CGGAACACCCACTGACACGCGGACGCCTCTCCTTGGACTTGTAGATACTG GTGCAGCAACGAACGGAACTGGCTTATCGCCCTAAACAGGTATGCATGCG TGCGTGCGCAGCGTGGCAGTTCCTTTGCTATGGCTTTGAAGGGTGTACCA GTAGTTCCGCCGCGCACTACGCCAATTTCTTCGTGATATAAAGTGTAGCT TCCCCTGCACGTTCGAAAAAGAAGAATGCCGACTTCTCCACTTTTTGTTT TTTACCAGCACTTGGTTGTGGAGTAGCGGAACAGCACCGCATCTGCTGCT TTGTGTTGTTTCGACAGCGATGCGGTACTGCATTTTGTGAGGCCATGTGC CCCTTGTTCGACAGGTTGCGTGCGAACGCTGGCTTCAACTCTACTTGCGT TTTCCTTTGGCTTCGGGGCATGGGCGCTAGGGTGGCAACTGCCGTGCAGG CCTTCCAAACAAACCGCAGAACTTTCGCGATCGTTGCCACAGTTCTTAGT GCCATCGTGGCGAACAAAGAAGGCGATGCGTGGAGTAATCCCCGTTGAGC TTGCGTAACCGCAAAACGGTAGACTCTTCGTGTCGCACACAGTGCGATCC TTGTGCTGCACCACTTCTTTTCGGTTTTCTTGCCGCAAGATGCCGGGAAA GCACGAGAGTTACTCACCCGTCCCTTCCCCTCTCATCCCCGGGTCCCATG GCGGCGTGCTTGCTCTGGTGCCGCTCTCGTGACGGAACTGCGCGTTGTGG CCTGCTTGCCTTCACCTCCCAGTTTTAGCATGACGTCCGGCTTGGTTTTA GCCACGTCGGCGGTGTCGCTGCTCCTATTTACAAGGCGAGTTCGAGTGCT ATCCAAACAGGGCCGTGAAGCAGTTTGCAGAGAATCGTCTTGCTTTGAAA TTGGCCCGCAAAATGTATTCTTGGGGATTACTTTCCCGGAATCGTTTATC GTCGAACGCCTCTGCTGTACAACGCCGCGATTTTGAAACCTGTGCAAATA TGTCCTGTCGACGTCTTTGTTCTTCGCTGTCAAATCATACGCGGTATGCT GCGATGATGTGATGGTTTTAGGGATGAGCCTCGCATCGTATGTGATGTTA TTTTTTGGATCTGCTTCAGGTATGAGGAAGATGAGGCGGATGGGACGGAC AGCACCGTGTACAGCACTGCCGTGGCTCTGGCCGTAATGGGCTGTTTCCA GGTGCGGGAGAGCATAGCCTTGTCCACAGCGAAAGATACAGCGGCCTGCA AGTTCCGTTCCGTAGTGTCACCCACTCCCGGTCGTGTTTTCGTCTTCACA CGGCCTCCGCTCGTCAGTAAACTCCAGCGAAACACTATTGTTCAACGCCG CTTCTCAGGCGTTTCTGTGTTTTTCGGGTGACAGCCCCTGCTGCCGTTGT GTGGCACGGCCAACACACGGCATTGTTCCATACTGCTCCAGCCTACTGTA AAGTGTTTTTTTTTTTTTTTATGCGTAGAAGAACAAACCCCTTGTGTATA CCGCAACGAGAATGGATATTAGGAGGGTGCTCGCCTCCATCCTGTTTGGA CTCTGCTCTTACCGTGTATTTGGCGTGCTCGTGCTTTGTTATCTCGGGAC GCTGGTGCTCGCGTGTGCTGCTCCCGCCCTCGCATCTGATTGGCTGGCCG GCTGGGTGGGCGGGTACCCGTGCCGCCTATTGTGTCCCGTGTTTTCTCAG ACTGTGGTGGCGGTCATTGGCATCGTCGCCGCCGATAAGGTGAGGTCCAA TTTTGTTTTATCGAACACTTTCCTCTTCGAAACAAATCGGAAAAATGCTT GACAGGCAGACTCAATAATAAAGGTATAGACGCAAGGTACTTACAGCAGT GCTGCTCTGTGTGTCGCATCCTTTGCTCGCCACCTCCGCTGAGACCAAAT TCGCGGGTCTTGCTGAGTCTCCCTGAACACGGTGGATGAAGGGGCCCTCT CCTTTCCCGGCTCCCCCGCCGGTCCTCGACTGTACTGGTAACTTTCTGAA AAAAAATCATGGCGATAAGCGCTTGCAAAGGTCGTTTCTCCCTCGGTCGT CGACCAAACGAGAGTATCCGGACACTGACGTCGTTCTTTTTCTGGAGCAT GCCCAGCTTCTCTTGGAACACACGTGTGAATGGCCGCGCAGTGTGCGGAC GACCAACCCGAAGGTGTAAGAAGGCTTTTTTCGATCCGCGCGCAATTGAA ACGAAACTTGTTTTTGCTACACTGCTGCCTCGCCCGATAGCGATACGTTT GCCACGGTTGGGCACAGGGTATGGAATGGAGATTTGCTGGTGTGGACAGC TATGCGGACAATGGTTCGTCCGCTCTCACCGCAGCCAAGGCGTGATCTTC CTTTCCTTCGGTACCACAGGACCTGACCTTTTTTTCGTTGCTGCCCGCTC GCGGCGGCGGTCCCCCTTCCGTCCCATCTGTGCAGGTCAGCCTGCACATG ATGGTGTTTTACTTCTGGCTGGTGGCCTTGGTGATCGGCTCGATGTTCAT GTGGAGCATCGCCGCATTAGACTTCCATTCCAACTTCCGGGTGAGTCATC GTCATCCTCCCACGCCTGCTCTGTGTTCGTCGGCATGTTTGACACCTTTT GGCCCTTGGCCCTTTTTGTCGGGTTTTGACTCTCGGGGAGGCAGTTGTCT TCTGTTTATTTGCGCGCGCATCACGCACGCGACCTTCACGTGTTGCCTTC AGTTTTTGTGTCGCTTGTTTTTCTAGCCAGAGGCTGACGTCCCTTGTAAG CGACCGTTCGGACAAGTAGCGCACTTTTGGGTAGCTTCTTCTAGCATGGT TCGGGTGGTTCCCACCGCTTGTTTGATCCTGTACTTGTCATAGCCCGGAG CCGAATGTGGTCAAAGCTGCGCCCCAGGCTATCATATCAAGTAGTTTCAA TCGAGAACCTTACACGACTGCAGGCATGTGCTGAGGCGTCGTTCGCTCCA GCGATGTAGCACTCCTGCTGCTGCACATCCCACCCTTCCCACCCCACCGG CGCCCTCAAAGCACCCCAGCACTTCTCATTATTACCCCGTGCTACTGCTG ATAAAGCACCGCACCTTTCGGCTCGCGCGCCCCCCCTATGCTACCCTTTC GAACCATGTCCCACCGTGCCCATCTCTGACGCAGGTATGGCTAGACAAGC ATTGGGACGAGCCTGCCCTAGAGAACGTGCGGGATCGGCTGTGCTTGAAC GGGACGGCCAGCGCTGAATGCGCGGTGCCCCCGGCAGGCTTCCCTCACGG ATCCCCAGAGCTGTGGTGCCAGGCGAAGTACGATTCTGACGATTGCTCGG CGATTAAAGCGGAGGTGAGCGCCAAAAACCCTCGCCCTGACACAACGAAG CTGGCCTGTGTGCGGTTACCGCAGTGCCCTCTTATTGTTTTGCTCTCTCG GGCTTGGTCTTGGAGCTCTACGACGTAGGTAGCAAATACTCCGCAAGGAC GAAAATTAGAGGGTCCCAGTGCCAAAGCCTTCGTGCAGCTCTCGACCGGC GAGAATCTTCCCAACGCCGCGCTTTTTCGGCGCAGAATTATTGTTTTCGG CTGTGAAGATGTCGAGCTTTTAACAATCGGGCAAGGGGGGGTAGTGGAGA CGTCGACCTCCAACAATCGGGCAAGTAGGGATAGTGGAGATGTCGAGCTT AAACAGTCGGGCAAGGGAGGGGGGGGGGGGGCATTGCGGTGTGACCATGT TTATTGCGTTTCGGCGCGTAATGAATAATCAATCACCAAAACCGAACCGG CATGTACGGAACAGGGCGACGTGTAGCCTCCAACCCTGCCGGCGGAGGAA TACAAGAAATGCCTGTGATTCCAGTTGTGTGACGTCTGAGCCGAGCCCGG ACGATGCGGACGGTTTTCACGACGATGAATCCGTGGAAGTTTGGGGAGAG GATGGGACGTGTCGCGCGTTATAGCGGGGGCTCTTTTGCAAGGCCGTCTT GCTTGCTGCCAGCGTTATGGCCGGCGACAACAAGGAATCGGAAGCGATAT CAATTATCTGTGCTCGATGAGGCCTCGATAGCTAGAGGGAGATACGGAGA GGTAGAGGGGGAGAGCGTGAGAGAGCTCTACAGTTAGGGGTGCTAATCGG TAAATTTTCCTATAGGATTTTTTTTCAAAATGTGTCCCGGATCTTCCAGA TGGAAAATCATTCGAGCCAATCAAATACCGAGAACCGGTCCTCATCTTCT ACAAAAAAAGAATGATGGCAACAGGAGCTGCTGCTGCTGTACACATGGTT AGATATATAGATCCTTGTATTACATATAAATACGTAATAATGATGTACAG CAGCAGCATTATTATATATACATGTAATGTATGTATAAATACGTAATATG ATGTACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGTGCTCCACAT GCCCACACCGACATGAGTACTCTTGCCACAACACCCGGGGGGCCGATGCT AGGCGCACACGGCATTTGAGTCTCCGCCGTCTTGTCTTTCATGTTGCACA CACGAAACAGCCCCCACCACGGAGAGTCAGTCTCCTCGCAGAAAAACGAC ACGATAATCGGGAATTTTTTATCTCCATGACGAAGGGATTCGTCTCCCGC TACAAGCAGGAAAGGTGCCTTGAGAATCGCATCGCGAAGCTTGTCTCCAT CCAGCGTGTTGATGCCCACAGCGTAGAGCTTGACCGTGTTGCGATGGCAT GTGATGTTGAGATCCTCCTTCATCCGCACCCCGGTCGAGAACTCAATTGC AGCTGAGTAGATGGGACCCACTGACTTGAGAGAGTTGCCATGCTGCAAAC ACTTCTGAAAAAAGCGTGCTGAACCCTCACCAAAACTACCGTCTGGCTTG AGTTTGCTCTTGACATGGGCTTTCAACTGCTCGAAAAACTCCTCCCCAAC TTCGGCTGCACTGCCCCCTTCTGACCTCGAACCTTCCATCCCCTCAGGTG CCGCACCATCTCCATCTCCATCGCTGCTGCCTTCCACCTTCTCTTTCAAC AACGCAGCGGCTCGTTGGTGTCGTGCAGCCTACGTAATTCGAAAAGACAG CAGGGGAGGGGGTGGGAGAGAGTAATTCGTCATCCACAGCAAAAAAACGA AAAAAACATTGTACCTGGTATTTCTTAAGACTGACACACCGAAACAAATA CTCGTACAGCAGCAGCAGCAGCACCGCCGCGTCGCTTCTGATCGAACCAA CTGACTGACACAAATAATGTGTTCAGTACCGTCAGTCGGATTTGAGAGAG GCGAAGAGTACAGCAGTCAAGAGCAGGACCAGCAGCAGCTACACACGAAC CACATGAGATACGCGAGAGAAAACCAACAAGGAATCAGTAAAACAGCAGA GGGGGCCGCAGCAGTCGAGAGCAACAGAAGCAGCAGTAAGCAGCAGCAGC AGCAGCAGGAGTCTCAACAAAACATATATGTACATATATAACATATGTAT ATATGATACTTGGTATACAGCAGTAGGAGTCAACCAAAAATATATATGAC TACACATATGAATACATGCATACATGTAGATAGATAGATACATACATACA TACATACATACATACCGGCAATAGAAAGAACTGAAAAAAAGCGAAACTAA AACTGGAAAAAAAAGCACAACCGAACCACACCCAGCCACCACACAACGCA CGACACGCAGCACACCTTTTTCTCCGCTGTAGTGTTAGCCTTCTTCAGCT TGTCCACTTGCGGCTGAAGAACAGCCACCCTCCTCTCCAGCCGCGTCACC CTGAACCTTTCGAGCTGGAGTTCATCTTCAAGGCAGCGTGTGCTCCCCTC TTCTCCCTCCACCTCTGGGTTGGTTGGGAAGCCGGTGGCGCGGCAAAGCT CCCGGTGTGTTCGGGTCAGTTTTTGTTTTTCTCCTCGCAGCGAGCGCAGC TCCTCTTTCATCTTTCGGGAGTTCTCTTCCGCCTGCCGCTGCTTCTCGGT CGCCCTCTCCTTATCCCTCTCGGCGCGTTGCGTCCGTGCTTCGGCCTCCA TCCTTCGCGATGTCTCTTCGGGCAGGGCTGCCTCTTTCTCGAATGTGAGC TCGCGCACCAAGTTCACATGTCCCTCGCACTCAATCGTTTTTTGCGCAAC CTGACTTTCAGCCGTTTTCTTTTGCTCTACTGCTTGAGCGCGCTCTTGAC GTGCTTCCCCGAGCAACCTCTCCACCACAGCGCGCCCTCCCTTCTCGATA GCACGCTTTTCGTTCGAGGCTTTAGATGCAGCGGCGATGCTCTGTCCCGT TCTTGCTTCGAACTTGGCCTTGTTGTTCGCCAACCTCCGCCGGGCGAGGT TTTTCGAGGCGCCAAAGGAACGTCTCGTTTTTTTTTCGGCGGAGGTGAAA TGTTTCCAGACAGAGGAGATTTTTTTTCGGAGCGAGCAGCGGAGGCGGAC TCCATGATGATGCCCGAACGGTGACGAAGAGGCGATTTTTGTCGCACTCG TGCTCGACGTTGGCGTACGCTAATCGAGCTCTGTTTTTTGTGCTGTGTGC TTTGAATCCCAAGGTTGGGTGTAGTAGGCTTTGTATTTCAATAGATGGAT CAACCCCACCGTCAAGACAGGGGATATAGAAAAAAGTGTGAAAATCACAG GTTTTTTGCAATTTTTGGACCCATTTTTCAAGTAAATGAAAATCGGAGGT TACCATGCGCTGGCCACAGTCTATGCGCAAGTGCCTGCAGAATATGAAGA GCCAATACGCCCCTTGGCGCAAGGGGAGGGCATCCAAAGATGAACTCAAG AGCGGTCTAAAATCAAGTACTTTGGGTACTCGGCGCCATGCGGCGGAATC CTCTTTTTTTTTTTCTCGCTCAGTAATTCTCGAAATTTCTCGAATAGACC GTACAGTTTTTTACGCGTATACAAGGTCCGATTAGCACCCCTAACAGTAG TTGGTCTGTCGCTCGATGGTTGCACTCAGTTGACTGTGAAAGCATAGACC GGTGAGTATACGAGTAGTCGTGGCATCAATGGATAAAAGTGGTTTGTTCG TTATGCCGCAAATGTTTGATACCGCTGAAGAGTGACCCAGCATTGCGGGC TTCAGCCTCACCGAGTAGGCGTGCGACTCGAGTCCCACTGTACTAATGGT TTCACGTGGTGTAGTGCACCTGGTCTGTTTGCCACCTTTCTCCCCGCACT ATCTTTCAAGAATACTTGAGATACTTTGACCCGAAACACAGCTCGTCTTA ATATTTATTTTGTGTTGACGCGCCTGGACCACTCTCTAGGCGGTGGACAA GGCCATGGATTTCTTATCCCTGTTCATGAACGTGGCCGGAGGCTTGTCCG TGTCTAGCGTGGTGGAGATGCTTGCGTCGCTCATCCTCACCGTCAGGGTG GTGACGATCCCAATCATCATGAGGTGAGGAGGTTGCCGAGAAAAAGCACG TGATTTCGCTGTCGTGCGTGAGAGCCTATGCACGTCTTGTTTCTATTGTA CTACTTCGAAGTACACCGCATCAGAGGAATCGACTGCGACGTGCTTTGTT CCGTTCGTTGCTGCACGTCGACGTTGCATTGCATTACTGTGGTCTGTCGC GTGCTGTTGTCAAGGTGGCACTTTGAGGTATTTGCGCTGGGTGCGTTGCT GCACGTCGCCCCCTGCGTCCGCCACCGTCGAGAGTTTTGCTTCGCTCTTC TCGGCTATATACAACGAAGCAGAAAAAACTGTCTGCTCGCGCTGGTGTTT CGTGTTACGCGCTGCCCCGGTGCTATCTGCGACTGATCTCGGGCGTTGCG TATGTCTGTCTGTGCGTGCCTGCGTGTCTTTCTGCAGATCAGTGCAGAGC ATGATCAACTACCTTCTGGTGTTTCCGGTCGTGGCGGCCATCGTCGTGGG CTACGTCCAGGTAACACAAGCGGTTGTTTTTATCGCCATGTATGATACTG CTGCTGTGTATTTTACGTTCCGAACACCTCGAAGGCGCAATGATTCGCAA CATTGAGTGGTGCATGTCATCGGCGTGGCATAGGTCAGCTGCTTGAACGG TCTACAGCACCTCGCCGGCAGACCGTTCGTCGTTGCGCGCTTGCTGTGAG ACAAGCAGGTAGCCTCAGAAGTGCAGTCTGCCGTGTGTGGGGCATGGAAT CGCCTCGTTTTGGCTTGCTCCAGGGCTCCCAACGAGCAACTTTGGATGCT TTGTCAGGATGTATTGCTAGTTGCTCCTGCGGAACTGGGACTCCTCGTAA ACTTTGTGCGACCACGGCAATCGTTTCACTGCTGTCTTTTTGATCGCCAC GGCAACAAGAGGTTAACACGGATTTTTCACTAAAACAAAACAACAACAAC AACAACAACAACAACAACAACAACGACGACGACGACGACGACGACGACGA CGACGACGACGACGAGGCGCACAGAGTGGAATGTAAAAACATCAGTTGGG CACGGCTGTTCCTGCTCTGACCGCTTGTTTTTCTCCGAGCAGCCACACGC TCCAATCAAACCCCGGAGTTCTTCTGCGAGCACGCGGCACTGCAGCGCGA GTGTCAATGTTTGTCATCCGGATCCACTATTGCTTTAACCCTTGAAGGCT TTGTGCATCACCCGTCATCTCTTGTGGGTAGCGTGGTTCCGTTTTCTACG AAAGCAGGAAGGCGTCCACGCCGACAGGCACGCATGCTCGCCACTGGCAT GTTTCCCTCTGCGCGTGAAGAGAGCGGCTAAATGAGTGTTTTTTTTTTTT TTTTACGGTTGCCACGAGCGAAGGCAGCGGCTTGAAAGCATGGTGTGTTG TGACTCCTGCCGTAGTAGAAGTGCGAACAATGCCGACGTCACCCACGGGC ACTTTTTTTTTTTTTCACGAATGAGGCGTTTTTTTGCCATGTTTAGGGTT GGGGTTGTACAGGGTTGACCTCCTCTGCATTCCTGAGAAGGCCGACGGGC TGTCGATCGTCCGCCTCATCGTCCCCCGCTGTGGCGCCCCTTTTTTTTTT ATGTGCAGTCGTTGCATCGCCCGATGCTGGAGGTTCTGGGACTGGTCGAC CTGCATTACGTGGTGGGGGCACTGCTTTTTTTGGTCGCGGTGATGGGGTT GTTGGCGGGGCACCTGCGCCACCACCTCCTGCTGCAGGTGCGGTCGGTCG GTCGCCTCTCGTCTCTCGTCTCCAGTGGGTGGTTGCGCCAAACGCATGAT TGCTGGCGTGTTGTCATACTCCCTTCTCGCCACACAGTTGTGTACCGGGT CCCTGCCGCATCGTGGCGCTGCGCGGCAGAGAAAGCGAACCCCCGTGCCA TGCTTTGGCCGCGGTTCGGTGCGGAGATCCTTAGAGAGCCATCCCGTACA CTGCGCAAGCTCTCGGCGGGTTCGTGACATGCCAAGGAATTATGATAGAG CGTGCGTGCTACGCTGTGGACGATCTATTTGAGAAATTTGCGAATGTTAG CATTAGTTTTTCGGTTGTTTTGTCAAAATGGGGTACTCTTGTGAGCGGTT TTGTCCGTATGCGGAATGCTCTTGGCCGTGGGCTGGCTTGTCGGATTCGA CCTTGTTGGAAGGTGCCGCACGTGTGTGTCTCTGTGTGTCTGCGTGTGTG TGTCCTCGTGCCTGTGCGTGTTTTGATTTGGCTTTTAGGAGCATGCATGC TTGCCACCTCTCGGCAATCGGAGTTCTACACTCGTACGTTTGACTTTTGA CAGAGTTAAACCACTCCTGTATCGTATCGTACCCCACCTGCACTGCCTCC GCGGTCTAAAGTACGAAAACCTATCCCTCTGCCCTCGTTGGTACGTTCGG TTCCGCTTGTGTTTGTCGTTTGCGAAGGTGTACATGGCGGGGCTGTGCGT TGTGTTGATGTTGTATATCGCTCTCATTTCCCTGGGTCTGGTCTCGTGGG GAAAGCTGGCGGACGGGTTCGACAATCACGAACTTAAGGACATCACTCGA ATGGCGTGCGAGGTAAGTAAGGACTTTCACAGTTGCTCGGGGGGATCCGT ACAGGAAATGTCAGGGTGGGTGGGTGGGTGGGTGGGTGGGTGGGTGGGTT GCCTTGGTGGTTGGCTCCTAAGGAACCGCTCGCACACATTCTGCGGCCCG TCTGGAAACAGTCGTGGAGTTATGATGGCTGCTTGAAGCTGAAACAGGGC CTCGAAAGTCAATAGCTGCTTCAAGCTGAAAACAGAGCCTCAAAATTCAA CTACAAAATCTTCGCTAACAGAGGCCGCGATCGTGGGACGGGGGTTGTCC AGGGCGCGGTGTCGAAGGTAGCAGGGGGTTCGTCGGCGTTGGTTGCTCGG GAAAAAAATCTGGAGCTTTAATTACCATGGGTAACGTCGTACACCACCCC CGTTCCCCGAGACGGCTTTTCAAGCCCGACTTACCGGTACTTTTGGCAAC GAGCGCAAGAACCAAATATTTTGTTTGTGTTGGCCTGTGAAGAGCCTTCC GGCGATATGAAGAACCTTCCAGCGATATGAGAAGAGTATGTATGCCCCCC CAACGTCGCCTTGGAACATACGCAGAAGGTATCAGCATTTCCCCCCGTTG CGTGCACGCATATACGATAGCAGAGTTATACATGCACTCGTCCGAAACCG GGGGACGGGAGAGGGGGAGGTGTGCTGCCGTCTGCCTCTCCCAATGTTGG TTCCTTTTGCGCCCGGCATGCGGGCGATGAGTTGTACAGTAGCATCGATT GAATTTTACTCACCCTTTGGCGATCGATCGTGGCGGGGGCGTGGTCCAGT ATTCGTTCCCAAAATACGATGCAGCGGTAACCCCTGACAACTTCTGTCCA GCCCCACGTGCGTGGGATGATGATGGGATCTACCGAAGTAAAGTGCAAGC ACCGCTTCATCATCTGGCGGCTGGCCTCAATCAAGCCCGTGCCGTTCCCC CATTTGCTTTCGCGATATTGACTGCTGCGGTCTACTCCTCCGGCCCGTCG CAGGTCGGCGTACACGGCTGCTGCTGCTGTAGATTCACGGACGAAATCGA TCTAGGCCTGTACAAGGTGCCTGGCTGCCCAGAGTGGTCTGATCCGTGAG TAAATATCACAGCACTGGCACACGTTTCTTTTGAGAAGCACATTTTATCA AGAAAGACGGAAGAACCCATGAGACGGAGACGGCACTTCGCAGAGGGCGT GTCGAGTCCCGCAGAGAGAGAGAGAGTTTAGATACGATCCGGGCGGGAAA ACAAACGCCTCAAAAAAAATCGAAAAAGGTACTCACGTACGTCCCTACAA CCTCTGCCAGGCCGAACAACGTACCATCGGGGAGCCCTACTTTTAACTTG TGTATCTCAGTAGACCTTTCTCTTTTTCTTCTTCTATCGACAAAAGAGAG AGTCCCTCCTTCCTGTTGTCCGCGTGGTGGGAACTTTCGCGCCCCCGGTG GTTGACGAGGGCCTGATCTCAATTCCGACCGTAGGGAAGTGTCTGCACGC ACGATGTTGAGGCGAAACGTTTTGTAGGGTGTCGCCATGTCCCGGCGTTA GGCAGCCGAGTGTTCCGTTTGCTCGAAGTTTTTTTCGTGTTTCAGCCGTG TCGACGCTTCTTCGCTGCTGCAAAATTTTGAAGCGAAGCCCGCACATAAG AAAAAAGCTGTGTGTGCGACTGCGTGAGGTATGATAACCGCGATGGCCAG TAGTAAACTGCTTTTTTTTTTCCGAGCTTTCTTACCGTTGGCGTACGATC GGCGCAGCAGATCGTTTGGATCGTACCATCGTGAACTCTTAATAGCGTTT GTCGTACTCTCTTGAGTTCCTGCTTGGAATAGTCTCGCTGTTCTGTGCTC CCTCCATACCGGTGCTGCTGCTGCTGCTGCTGCTGCTGCGGACATCTTAA ACCTTCCTGTGCTTCCAGACAAGAGCTGGCGCAAGTCGCGATCGTGTTCG TGAAGCTCGGTCTGCTGACGTCAATCATGAGCTTGGTCTTCGTTCTCTGC GGTCTTTGGGCAAGTTTGGTCTTCCACAACAACCTCAAGGGCTACCAAGT GGAATATATCTGACCGGTTCAAGGAATTGCAACTTGCACCACCCAGGACA GGCACCGTCGTTCCAGAAATCGCTCTGCAGCCCAAGCGTGAGTGGTCGTC TTGGACTGCCTCTTCCAAGCTAACCTCTCGTGCAAGATTGTTCGCGTTTT CCATACTCTTTGAAGAATGTCAGCTCCGAGCTCTCTTCTGCTGTGGAATC GGGTGTTTCTTGCATGGCGTCCTGCACGGTGCACCAAGTGGAAAAAAAAA GCACCCGGGTGTGTGTGCCGAGCGTCGTTCTACCGGTGACCGCTTTGTCC GGCACGGCTCCACCTTGCCGCATGCAGCACCGAGAAGCACTGCTAGTTTC GCGCTTGCGAGCGTCTTAGACTAACCCCCGGGGGTACCCTCATTGTAGAC CCTCAGAGGGCTCTCGGCCATTTGTTTTTGACGACTTTGGAGCCGTGTAG AACCAGCTTGTTCGGGACGGTCGGGCACCACTTAGATCGATCAGGCCGAA CAAAGCAGTTACTCTGTACGGCATGCCAATGGCGTTTTGTGGGGGTCAGT ACCTGCATAGCAAGGTGTAACCTTTTATGGCTTGGTAGGCCACCCTGCTG CTGTTGTTGCGGTGTGTGTCGTTCGAGCGCGTCAGGGACCGCGGTGTGTG AAACAAGACTTTGCATGTATGTGTGATGTACTGTACGAGTGCTGGTTGTT GTGTACGAAGGATATCTGAGTTGTTATTTTCTTTACGTTTTGAACGTACG GAGAGTGATATGTGTGCCTGACGCTAGTTGCCGATTTGCTGGGAGGGGCC GTTTTTTGCCTCGCCGCCGCCGGTAGTCCTTGCCCCGTAGCCCTTTTTGT GTGTCAGTGCACGAATCAACGATCCGATAAGCCGTCCCTTGGGGCGAGCA AGTAACCTGAATCTCAACATCTCTCCCGGGGGTGTGATTTTTCTTTCGTT TAAGTTCGGTTGTCTATGTTTTTGCCTCATGTTGGGCGGCGTGGTTCGCG AACCAGACGCCAATTGGTGTTGACGTGATTTTAACATTCAAACCGGGGCG AGAGTTTCGTACAAAGAAAAAAGAGCGAATCGGTCGCTCGCCAGTGAACC GATGTTGTCCTGTGTCGACCCTTGGGTGGCTTGAAAACTTTCGAACACTC CATGTGTGGTACGGTACGGGTGGAAACATTTGAGACCGCAAGCCCGAGAG TCTTGCGCCATGTGCTCTCAACGTGTGTGTGTACCGGTAAGCTACTGCTG TGTTGCTGAGGCGCGTTTTAATTTGTTTGCTGTCTTTATACAGCAGAAAA CAAAGGGGGGGATTCGGTATCTG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig92:212746..227668+

>mRNA_P-littoralis_Contig92.46.3 ID=mRNA_P-littoralis_Contig92.46.3|Name=mRNA_P-littoralis_Contig92.46.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1266bp|location=Sequence derived from alignment at P-littoralis_Contig92:212746..227668+ (Pylaiella littoralis U1_48)
ATGGTCCTATTCCCACGGACTTTCGACGCAGTCAGATGGAGATACTGGTG
CAGCAACGAACGGAACTGGCTTATCGCCCTAAACAGTTTTAGCATGACGT
CCGGCTTGGTTTTAGCCACGTCGGCGGTGTCGCTGCTCCTATTTACAAGG
CGAGTTCGAGAAGATGAGGCGGATGGGACGGACAGCACCGTGTACAGCAC
TGCCGTGGCTCTGGCCGTAATGGGCTGTTTCCAGACTGTGGTGGCGGTCA
TTGGCATCGTCGCCGCCGATAAGGTCAGCCTGCACATGATGGTGTTTTAC
TTCTGGCTGGTGGCCTTGGTGATCGGCTCGATGTTCATGTGGAGCATCGC
CGCATTAGACTTCCATTCCAACTTCCGGGTATGGCTAGACAAGCATTGGG
ACGAGCCTGCCCTAGAGAACGTGCGGGATCGGCTGTGCTTGAACGGGACG
GCCAGCGCTGAATGCGCGGTGCCCCCGGCAGGCTTCCCTCACGGATCCCC
AGAGCTGTGGTGCCAGGCGAAGTACGATTCTGACGATTGCTCGGCGATTA
AAGCGGAGGCGGTGGACAAGGCCATGGATTTCTTATCCCTGTTCATGAAC
GTGGCCGGAGGCTTGTCCGTGTCTAGCGTGGTGGAGATGCTTGCGTCGCT
CATCCTCACCGTCAGGGTGGTGACGATCCCAATCATCATGAGATCAGTGC
AGAGCATGATCAACTACCTTCTGGTGTTTCCGGTCGTGGCGGCCATCGTC
GTGGGCTACGTCCAGTCGTTGCATCGCCCGATGCTGGAGGTTCTGGGACT
GGTCGACCTGCATTACGTGGTGGGGGCACTGCTTTTTTTGGTCGCGGTGA
TGGGGTTGTTGGCGGGGCACCTGCGCCACCACCTCCTGCTGCAGGTGTAC
ATGGCGGGGCTGTGCGTTGTGTTGATGTTGTATATCGCTCTCATTTCCCT
GGGTCTGGTCTCGTGGGGAAAGCTGGCGGACGGGTTCGACAATCACGAAC
TTAAGGACATCACTCGAATGGCGTGCGAGGTCGGCGTACACGGCTGCTGC
TGCTGTAGATTCACGGACGAAATCGATCTAGGCCTGTACAAGGTGCCTGG
CTGCCCAGAGTGGTCTGATCCACAAGAGCTGGCGCAAGTCGCGATCGTGT
TCGTGAAGCTCGGTCTGCTGACGTCAATCATGAGCTTGGTCTTCGTTCTC
TGCGGTCTTTGGGCAAGTTTGGTCTTCCACAACAACCTCAAGGGCTACCA
AGTGGAATATATCTGA
back to top