prot_P-littoralis_Contig121.86.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig121.86.1
Unique Nameprot_P-littoralis_Contig121.86.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length44
Homology
BLAST of mRNA_P-littoralis_Contig121.86.1 vs. uniprot
Match: D8LEI8_ECTSI (Ubiquinol cytochrome c reductase subunit 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEI8_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 2.740e-23
Identity = 38/43 (88.37%), Postives = 42/43 (97.67%), Query Frame = 0
Query:    1 MTEYKACIERVTSKGFGTCEPWFFDIVTCVDKCAAPKIMKATK 43
            M+EYKAC+ERVTSKGFGTCEPWFFD ++CVDKCAAPKIMKATK
Sbjct:   27 MSEYKACVERVTSKGFGTCEPWFFDYISCVDKCAAPKIMKATK 69          
BLAST of mRNA_P-littoralis_Contig121.86.1 vs. uniprot
Match: A0A6H5K2B5_9PHAE (UCR_hinge domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2B5_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 9.210e-22
Identity = 36/43 (83.72%), Postives = 40/43 (93.02%), Query Frame = 0
Query:    1 MTEYKACIERVTSKGFGTCEPWFFDIVTCVDKCAAPKIMKATK 43
            M+EYKAC+ERV SKGFGTCEPWFFD ++CVDKCAAPKIMK TK
Sbjct:   27 MSEYKACVERVISKGFGTCEPWFFDYISCVDKCAAPKIMKVTK 69          
BLAST of mRNA_P-littoralis_Contig121.86.1 vs. uniprot
Match: A0A7S3LAV8_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LAV8_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 4.220e-10
Identity = 22/40 (55.00%), Postives = 29/40 (72.50%), Query Frame = 0
Query:    4 YKACIERVTSKGFGTCEPWFFDIVTCVDKCAAPKIMKATK 43
            Y AC++R+T K  G CE WF ++++C DKC APKI K TK
Sbjct:   65 YDACVQRITEKKEGDCEAWFIELLSCADKCVAPKIFKLTK 104          
BLAST of mRNA_P-littoralis_Contig121.86.1 vs. uniprot
Match: F0XZK5_AURAN (UCR_hinge domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZK5_AURAN)

HSP 1 Score: 53.9 bits (128), Expect = 1.630e-8
Identity = 20/40 (50.00%), Postives = 30/40 (75.00%), Query Frame = 0
Query:    4 YKACIERVTSKGFGTCEPWFFDIVTCVDKCAAPKIMKATK 43
            Y +C++R+ +KG G CEP++FD + C+DKCA P IM+  K
Sbjct:   28 YLSCVDRIEAKGGGDCEPYYFDWLKCLDKCAMPHIMQKLK 67          
BLAST of mRNA_P-littoralis_Contig121.86.1 vs. uniprot
Match: A0A067CW65_SAPPC (UCR_hinge domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CW65_SAPPC)

HSP 1 Score: 50.4 bits (119), Expect = 3.650e-7
Identity = 22/43 (51.16%), Postives = 30/43 (69.77%), Query Frame = 0
Query:    1 MTEYKACIERVTSKGFGTCEPWFFDIVTCVDKCAAPKIMKATK 43
            + EY AC++RV  KG   C+  +FD++ CVDKCAAP+I K  K
Sbjct:   25 VKEYNACLDRVAGKG--GCDGQYFDLLKCVDKCAAPQIFKHLK 65          
BLAST of mRNA_P-littoralis_Contig121.86.1 vs. uniprot
Match: A0A1V9ZR46_9STRA (Cytochrome b-c1 complex subunit 6 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZR46_9STRA)

HSP 1 Score: 48.1 bits (113), Expect = 2.920e-6
Identity = 20/43 (46.51%), Postives = 30/43 (69.77%), Query Frame = 0
Query:    1 MTEYKACIERVTSKGFGTCEPWFFDIVTCVDKCAAPKIMKATK 43
            + EY+ C++RV  KG   C+  +FD++ C+DKCAAP+I K  K
Sbjct:   24 VKEYQNCLDRVAGKG--GCDGQYFDLLKCIDKCAAPQIFKHLK 64          
BLAST of mRNA_P-littoralis_Contig121.86.1 vs. uniprot
Match: A0A1W0A993_9STRA (Cytochrome b-c1 complex subunit 6 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A993_9STRA)

HSP 1 Score: 48.1 bits (113), Expect = 3.060e-6
Identity = 21/43 (48.84%), Postives = 29/43 (67.44%), Query Frame = 0
Query:    1 MTEYKACIERVTSKGFGTCEPWFFDIVTCVDKCAAPKIMKATK 43
            + EY  C++RV  KG   C+  +FD++ CVDKCAAP+I K  K
Sbjct:   26 VKEYNNCLDRVQGKG--GCDGQYFDVLKCVDKCAAPQIFKHLK 66          
BLAST of mRNA_P-littoralis_Contig121.86.1 vs. uniprot
Match: A0A6J5VN54_PRUAR (Cytochrome b-c1 complex subunit 6 n=1 Tax=Prunus armeniaca TaxID=36596 RepID=A0A6J5VN54_PRUAR)

HSP 1 Score: 46.2 bits (108), Expect = 2.250e-5
Identity = 20/45 (44.44%), Postives = 29/45 (64.44%), Query Frame = 0
Query:    1 MTEYKACIERVTSKGFGT--CEPWFFDIVTCVDKCAAPKIMKATK 43
            + EY+AC++RV +   G   C   +FD ++CVDKC APK+  A K
Sbjct:   33 LIEYQACVKRVEADNNGDKHCTGQYFDYISCVDKCVAPKLFGALK 77          
BLAST of mRNA_P-littoralis_Contig121.86.1 vs. uniprot
Match: A0A6P5TDT7_PRUAV (Cytochrome b-c1 complex subunit 6 n=8 Tax=Amygdaloideae TaxID=171637 RepID=A0A6P5TDT7_PRUAV)

HSP 1 Score: 45.8 bits (107), Expect = 2.680e-5
Identity = 20/45 (44.44%), Postives = 28/45 (62.22%), Query Frame = 0
Query:    1 MTEYKACIERVTSKGFGT--CEPWFFDIVTCVDKCAAPKIMKATK 43
            + EY+AC++RV     G   C   +FD ++CVDKC APK+  A K
Sbjct:   25 LIEYQACVKRVEGDNNGEKHCTGQYFDYISCVDKCVAPKLFGALK 69          
BLAST of mRNA_P-littoralis_Contig121.86.1 vs. uniprot
Match: M4B7W7_HYAAE (UCR_hinge domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B7W7_HYAAE)

HSP 1 Score: 45.1 bits (105), Expect = 4.230e-5
Identity = 16/30 (53.33%), Postives = 23/30 (76.67%), Query Frame = 0
Query:    4 YKACIERVTSKGFGTCEPWFFDIVTCVDKC 33
            Y AC++RV SKG G+C+  +FD + C+DKC
Sbjct:   19 YHACLDRVKSKGVGSCDGQYFDFLHCIDKC 48          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig121.86.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LEI8_ECTSI2.740e-2388.37Ubiquinol cytochrome c reductase subunit 6 n=1 Tax... [more]
A0A6H5K2B5_9PHAE9.210e-2283.72UCR_hinge domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S3LAV8_9STRA4.220e-1055.00Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
F0XZK5_AURAN1.630e-850.00UCR_hinge domain-containing protein n=1 Tax=Aureoc... [more]
A0A067CW65_SAPPC3.650e-751.16UCR_hinge domain-containing protein n=2 Tax=Saprol... [more]
A0A1V9ZR46_9STRA2.920e-646.51Cytochrome b-c1 complex subunit 6 n=1 Tax=Achlya h... [more]
A0A1W0A993_9STRA3.060e-648.84Cytochrome b-c1 complex subunit 6 n=1 Tax=Thrausto... [more]
A0A6J5VN54_PRUAR2.250e-544.44Cytochrome b-c1 complex subunit 6 n=1 Tax=Prunus a... [more]
A0A6P5TDT7_PRUAV2.680e-544.44Cytochrome b-c1 complex subunit 6 n=8 Tax=Amygdalo... [more]
M4B7W7_HYAAE4.230e-553.33UCR_hinge domain-containing protein n=1 Tax=Hyalop... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036811Ubiquinol-cytochrome C reductase hinge domain superfamilyGENE3D1.10.287.20coord: 1..43
e-value: 2.4E-10
score: 42.4
IPR036811Ubiquinol-cytochrome C reductase hinge domain superfamilySUPERFAMILY81531Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)coord: 2..40
IPR023184Ubiquinol-cytochrome C reductase hinge domainPFAMPF02320UCR_hingecoord: 3..42
e-value: 2.1E-11
score: 43.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig121contigP-littoralis_Contig121:362462..363501 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig121.86.1mRNA_P-littoralis_Contig121.86.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig121 362384..364409 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig121.86.1 ID=prot_P-littoralis_Contig121.86.1|Name=mRNA_P-littoralis_Contig121.86.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=44bp
MTEYKACIERVTSKGFGTCEPWFFDIVTCVDKCAAPKIMKATK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036811Ubol_cytC_Rdtase_hinge_dom_sf
IPR023184Ubol_cytC_Rdtase_hinge_dom