prot_P-littoralis_Contig916.16.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig916.16.1
Unique Nameprot_P-littoralis_Contig916.16.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length517
Homology
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BLAST of mRNA_P-littoralis_Contig916.16.1 vs. uniprot
Match: A0A6H5L6U6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6U6_9PHAE)

HSP 1 Score: 167 bits (423), Expect = 9.740e-43
Identity = 89/144 (61.81%), Postives = 109/144 (75.69%), Query Frame = 0 
Query:   19 AIMAADETSQVTLGALRTVISSGWVSRVTALQLASIEMLRSCRETSNFRLRIARKTPRRVYKEKFSGAAGSSRSSGHEVTAVESRSRVVLPRIVRLLYDKSEFERTPDWSLPRELVGLVLGTAFGGDIDGVAWPPALESVVFWR 162
            A +AA  T+  TLGALR VI+SGWV+R  +LQ+AS+E LRSCRE +NFRLRIARKTPRRVY++KF+G  G  R S         RS ++LPR+VR+LYD+SEF+  P W+LP ELVGLVLGT F GD+ GV WPP L S+VFWR
Sbjct:  289 AAVAAGGTAATTLGALRVVIASGWVARTISLQVASVETLRSCREVANFRLRIARKTPRRVYQDKFAGG-GRGRVS---------RS-IILPRVVRVLYDRSEFDLKPGWALPVELVGLVLGTEFCGDLKGVPWPPTLSSIVFWR 421
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BLAST of mRNA_P-littoralis_Contig916.16.1 vs. uniprot
Match: D8LHW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHW9_ECTSI)

HSP 1 Score: 166 bits (419), Expect = 9.780e-42
Identity = 86/137 (62.77%), Postives = 105/137 (76.64%), Query Frame = 0 
Query:   26 TSQVTLGALRTVISSGWVSRVTALQLASIEMLRSCRETSNFRLRIARKTPRRVYKEKFSGAAGSSRSSGHEVTAVESRSRVVLPRIVRLLYDKSEFERTPDWSLPRELVGLVLGTAFGGDIDGVAWPPALESVVFWR 162
            T+  TLGALR VI+SGWV+R  +LQ+AS+E LRSCRE +NFRLRIARKTPRRVY++KF+G        GH      SRS ++LPR+VR+LYD+SEF+  P W+LP ELVGLVLGT F GD+ GV WPP L S+VFWR
Sbjct:   23 TAATTLGALRVVIASGWVARTISLQVASVETLRSCREVANFRLRIARKTPRRVYQDKFAGG-------GHGRV---SRS-IILPRVVRVLYDRSEFDLKPGWALPVELVGLVLGTEFCGDLKGVPWPPTLSSIVFWR 148
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig916.16.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L6U6_9PHAE9.740e-4361.81Reverse transcriptase domain-containing protein n=... [more]
D8LHW9_ECTSI9.780e-4262.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 208..251
e-value: 1.6E-9
score: 37.8
coord: 408..450
e-value: 2.3E-5
score: 24.5
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 108..405
e-value: 3.6E-6
score: 27.6
NoneNo IPR availablePANTHERPTHR32134:SF156SUBFAMILY NOT NAMEDcoord: 286..390
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 286..390
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 133..284
NoneNo IPR availablePANTHERPTHR32134:SF156SUBFAMILY NOT NAMEDcoord: 341..488
NoneNo IPR availablePANTHERPTHR32134:SF156SUBFAMILY NOT NAMEDcoord: 133..284
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 341..488
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 155..277

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig916contigP-littoralis_Contig916:53440..58401 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig916.16.1mRNA_P-littoralis_Contig916.16.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig916 53366..59547 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig916.16.1 ID=prot_P-littoralis_Contig916.16.1|Name=mRNA_P-littoralis_Contig916.16.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=517bp
MTADQRQPPPQSEETSRAAIMAADETSQVTLGALRTVISSGWVSRVTALQ
LASIEMLRSCRETSNFRLRIARKTPRRVYKEKFSGAAGSSRSSGHEVTAV
ESRSRVVLPRIVRLLYDKSEFERTPDWSLPRELVGLVLGTAFGGDIDGVA
WPPALESVVFWRRFNRGIDNVEWPHSLKKLTFGCNFNKPVVAAKWPPELE
ILSFGSWFDQSLSDVRFPDSLTTLNLGRDFNQPLEGIVWPKRLTHLTFGF
FFNRSIEIAAENWPPSLRCLSLGDCYNLPVVDVPWPRGLVEISFGRGFNQ
EVEGVTWPPALRKIKFGGMFDRDIAGAEFPEDMEELELGFAFNRPFVDVM
LPTGLKRLTFGEEFNRSVEGVFWPPGLGEITFGVQFDMPIAAAAWPRDLR
RLKFSESFNSPLVGVSLPGGLLEIIFGKAFNQEVEEVQWPDSLEVIVFGE
SFNQPIAGVTWPEALTTLRLGCDFDREMKEGVEFPSGLVAVEFVDSYRRV
EERGDQDEAAIAVSPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP
IPR032675LRR_dom_sf