prot_P-littoralis_Contig915.28.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig915.28.1
Unique Nameprot_P-littoralis_Contig915.28.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length183
Homology
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BLAST of mRNA_P-littoralis_Contig915.28.1 vs. uniprot
Match: A0A6H5JQW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQW6_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 2.320e-7
Identity = 28/92 (30.43%), Postives = 50/92 (54.35%), Query Frame = 0 
Query:   71 SGSSRIEIRQKTDVRPWTGNFSKGESVEIALRVFKGSVFAWLNSEGLDGFMDSQMEIPVGVENINMQQLRLDYGSDNVTKSLKVWNMLIQKI 162
            S ++ + + +   + PW G + +GE  +    +F  ++ A    EG+   + S   IPVG+E I+M+ LR  +  D+V K++  WNMLI  +
Sbjct:   99 SSAATLRMTEVKRLAPWDGMYRQGEDEQERFSIFPSNMIAMFAQEGVREVVLSDHIIPVGLEGIDMEDLRRMHSPDSVEKAITAWNMLITSV 190
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig915.28.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JQW6_9PHAE2.320e-730.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig915contigP-littoralis_Contig915:89693..90241 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig915.28.1mRNA_P-littoralis_Contig915.28.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig915 89693..90297 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig915.28.1 ID=prot_P-littoralis_Contig915.28.1|Name=mRNA_P-littoralis_Contig915.28.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=183bp
MSLPGQGEGENRQGTPPQPAADGSSGHHETPVGALSLSPGDLAGIASIVD
QVMRNAPAQAAAQDRGQPHQSGSSRIEIRQKTDVRPWTGNFSKGESVEIA
LRVFKGSVFAWLNSEGLDGFMDSQMEIPVGVENINMQQLRLDYGSDNVTK
SLKVWNMLIQKICCQPIQQQVLACRTPQQAWRV
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