mRNA_P-littoralis_Contig915.19.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig915.19.1
Unique NamemRNA_P-littoralis_Contig915.19.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig915.19.1 vs. uniprot
Match: D7FT91_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT91_ECTSI)

HSP 1 Score: 530 bits (1365), Expect = 9.600e-167
Identity = 330/494 (66.80%), Postives = 362/494 (73.28%), Query Frame = 1 
Query: 3343 QMPQRLPKSSTP-VSFTTARACTVYVILVLHTGVPASSLTFTPSPITNRSVDHADHHRHRSTNSNXIINDNNGRTSSSSWSSPACSRRGRKQRG-PSLLFAQLRSDALFGNHDA--RGXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAATDVFKEDEPYVLEGVKNIRDLSSIEGYGIAPGRVFRTGHLSAATEGDAKTLRDSTGLRTLVDLRSATELGKDEQIHGDIYEGFVNIGGGEHGGTGVWEGQAWDEAISEEEXXXXXXXXXXXRQNAGS-------------------RRRYFVSLIDESIYKKGVFQRLRRRHKAAVMALAPATMVSRRCTQKARDIFMRKINAGGLVLLNELLLQYSGDGINRVLRLLASKDRHPVALYCTAGKDRTGLVVALTLAVLGVPDQAIVDDYAKSDAAYKELADRDAMVGALSQQDLDPDTFLGAPPHVMEDVLRFIRVKYGSIDDYLDSIGFDAEWRARLRSALLT 4755
            +MPQRLPK  +P  SFT    C VY  L +H    A+SL F P PITNRS+D+A HH        X IN N G    +       S + R  R   S LF++L++ A     D   R  XXXXXXXXXXXXXXXXXXX        TAAA DV +E +P+VLEGV+NIRDLSS+EGYGI  GRVFRTGHLSAATE DAKT          VDLRSATELG DE IHGD+YEGFVN+GGG+H GTGV +G AWDEAI  E              +AG+                      YFVSLIDESIYKKGVFQRLRRRHKAAV+ALAPATMVSRRCTQKAR IF+R+INAGGLVLLNELLLQYSGDGINRVLRLLASK+ HPVALYCTAGKDRTGLVVALTLAVLGVPD+AIVDDYAKSD+AYK+LADRDAMVGAL+QQDLDPDTFLGAPPHVME VLRFIRVKYGSIDDYLDSIGFDAEWR RLRSALL+
Sbjct:   49 KMPQRLPKRVSPGCSFTNKAVCVVYTTLAIHATSGAASLAFLP-PITNRSLDYA-HHXXXXXXXXXDINSNVGPGVDAGGGRHRLSVQLRHGRDIGSSLFSRLKAAASSSPSDGNFRKGXXXXXXXXXXXXXXXXXXXARTLKCSATAAAADVARERDPFVLEGVQNIRDLSSVEGYGIVAGRVFRTGHLSAATERDAKTXXXXXXXXXXVDLRSATELGHDELIHGDVYEGFVNVGGGDHSGTGVSQGPAWDEAIQGESNDALPVQGKVGGASAGAGXXXXXXXXXXXXXXXXXXXXXYFVSLIDESIYKKGVFQRLRRRHKAAVLALAPATMVSRRCTQKARGIFLREINAGGLVLLNELLLQYSGDGINRVLRLLASKEHHPVALYCTAGKDRTGLVVALTLAVLGVPDEAIVDDYAKSDSAYKQLADRDAMVGALAQQDLDPDTFLGAPPHVMEGVLRFIRVKYGSIDDYLDSIGFDAEWRTRLRSALLS 540
[Close]
BLAST of mRNA_P-littoralis_Contig915.19.1 vs. uniprot
Match: A0A7S2UX35_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UX35_9STRA)

HSP 1 Score: 272 bits (695), Expect = 3.940e-77
Identity = 156/338 (46.15%), Postives = 208/338 (61.54%), Query Frame = 1 
Query: 3814 LEGVKNIRDLSSIEGYGIAPGRVFRTGHLSAATEGDAKTLRDSTGLRTLVDLRSATELGKDEQIHGDIYEGFVNIGGGEHGGTGVWEGQ----------------------AWD--EAISEEEXXXXXXXXXXXRQNAGSRRRYFVSLIDESIYKKGVFQRLRRRHKAAVMALAPATMVSRRCTQKARDIFMRKINAGGLVLLNELLLQYSGDGINRVLRLLASKDRHPVALYCTAGKDRTGLVVALTLAVLGVPDQAIVDDYAKSDAAYKELADRDAMVGALSQQDLDPDTFLGAPPHVMEDVLRFIRVKYGSIDDYLDSIGFDAEWRARLRSALLT 4755
            LE VKN RDL++++G  I PGRV RTG LS AT  D K L +  GL+T++DLRS  E+  D++  G I+E F ++   E      WE +                      AW+  + +SE+               A + +RYF+SL++ES+YKKGV  RL  R KAA +      +VS R  ++AR + ++K+N GGL LLNELLL  SG G+ R L++LA+ +R PVA++CTAGKDRTG +  L L++LGV  +AIV DY  SD AY +L D+ AMVGAL Q+DLDPD FL AP +V ED L  I  +YGS++ YLDSIGFD EWR +LR AL T
Sbjct:   65 LENVKNCRDLANVKGSPIKPGRVLRTGFLSNATSKDVKNLLEKLGLKTVIDLRSPREI-DDDKHEGSIFESFQSVDWTEDQQRRKWERRSKRSRAKYLVQRAAMELQGKAAAWNYRKKMSEKREKEREET-----MRAKASQRYFISLMNESLYKKGVISRLGNRQKAAAVMYLAGAVVSTRAYKRARSLVLKKVNEGGLGLLNELLLSKSGKGVCRTLKILATPERLPVAIHCTAGKDRTGFIAMLVLSMLGVEREAIVADYTLSDTAYADLNDKAAMVGALKQEDLDPDIFLCAPSYVCEDTLNLIDAQYGSVEKYLDSIGFDKEWREKLRLALTT 396
[Close]
BLAST of mRNA_P-littoralis_Contig915.19.1 vs. uniprot
Match: W7TPH7_9STRA (Tyrosine-protein phosphatase family, C-terminal domain protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPH7_9STRA)

HSP 1 Score: 258 bits (658), Expect = 7.710e-72
Identity = 148/313 (47.28%), Postives = 195/313 (62.30%), Query Frame = 1 
Query: 3814 LEGVKNIRDLSSIEGYGIAPGRVFRTGHLSAATEGDAKTLRDSTGLRTLVDLRSATELGKDEQIHGDIYEGFVNIGGGEHGGTGVWEGQAWDEAISEEEXXXXXXXXXXXRQNAGSRRRYFVSLIDESIYKKGVFQRLRRRHKAAVMALAPATMVSRRCTQKARDIFMRKINAGGLVLLNELLLQYSGDGINRVLRLLASKDRHPVALYCTAGKDRTGLVVALTLAVLGVPDQAIVDDYAKSDAAYKELADRDAMVGALSQ-QDLDPDTFLGAPPHVMEDVLRFIRVKYGSIDDYLDSIGFDAEWRARLRSAL 4749
            LE VKNIRDLSS+ G GI  GR++RTG+LS A+E D K +R++   +TL+DLRS  ELG D+Q++    +      GG++  T                                  +R+F+S+IDE IY++GVF+RL +R KAA + L     VS+R  ++AR IF+  IN  GL LLN+LLL YSG  + RVL LL+ K+R+P+ALYCTAGKDRTGLV+ L LA LGV   AI +DY  SD AY +L+D  AMVGAL Q  +LDP+ FL AP  V+E  L +I  K+GSI+ YLD IGF  + R  L+ AL
Sbjct:  129 LERVKNIRDLSSVRGSGIKAGRIYRTGYLSKASEEDIKFIRETAKFKTLIDLRSEKELGMDDQMNSSATKRGC---GGKNAET-----------------VRVDPSPAPSTGQTSVLQRHFISVIDEGIYQRGVFKRLAKRKKAAALFLITGGAVSKRARRRARSIFLNYINDAGLPLLNDLLLNYSGPALRRVLELLSDKERYPIALYCTAGKDRTGLVILLLLASLGVDSGAIAEDYVLSDTAYADLSDAKAMVGALEQVNNLDPEKFLRAPRSVIEHTLAYIEKKFGSIEGYLDQIGFTEDKRVALKKAL 421
[Close]
BLAST of mRNA_P-littoralis_Contig915.19.1 vs. uniprot
Match: A0A7S2NYU5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NYU5_9STRA)

HSP 1 Score: 244 bits (622), Expect = 1.650e-67
Identity = 147/332 (44.28%), Postives = 194/332 (58.43%), Query Frame = 1 
Query: 3814 LEGVKNIRDLSSIEGYGIAPGRVFRTGHLSAATEGDAKTLRDSTGLRTLVDLRSATELGK---------DEQIHG----------DIYEGFVNIGGGEHGGTGVWEGQAWDEAISEEEXXXXXXXXXXXRQNAGSRRRYFVSLIDESIYKKGVFQRLRRRHKAAVMALAPATMVSRRCTQKARDIFMRKINAGGLVLLNELLLQYSGDGINRVLRLLASKDRHPVALYCTAGKDRTGLVVALTLAVLGVPDQAIVDDYAKSDAAYKELADRDAMVGALSQQDLDPDTFLGAPPHVMEDVLRFIRVKYGSIDDYLDSIGFDAEWRARLRSALL 4752
             + +KN RDL+S     I P RV+R G ++ ATE D   L D   +RTLVDLRS TEL           DE+  G          D++EGF ++   E    GV      DE + +E                  + R+FVSL+DE  Y +G   +LR+R  A  +  +P  +VS+R     + IF+ +INAGGL LLNEL+L+ +G GI  VL L A K RHPVA YCTAGKDRTG++ ++ L+V+GVPD+ IV+DY+ S   Y E+ D  AMVGALSQ++LD  TFLGAPP VM D L  IR  YGS++ Y+DSIGF    R +L+ ALL
Sbjct:   73 FQKIKNARDLNSCNNSPIMPNRVYRMGKVTDATEQDMDILFDELNVRTLVDLRSRTELRDEMNGVHAHHDEEDSGADAALSSSERDVFEGFHDLTWSER--KGVRSLNKTDEVLLDE----------------SRKERHFVSLMDEIKYVRGTLSKLRKRDIAKAVLKSPGAVVSKRVRGNVKSIFLDEINAGGLPLLNELVLKMAGPGIKYVLDLCADKSRHPVAFYCTAGKDRTGILASIILSVVGVPDEDIVEDYSLSANVYAEMNDHKAMVGALSQRNLDAKTFLGAPPQVMRDTLTAIRKNYGSVEAYMDSIGFGPSDREKLKKALL 386
[Close]
BLAST of mRNA_P-littoralis_Contig915.19.1 vs. uniprot
Match: A0A836CH30_9STRA (Protein-tyrosine phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH30_9STRA)

HSP 1 Score: 241 bits (615), Expect = 4.590e-67
Identity = 142/312 (45.51%), Postives = 185/312 (59.29%), Query Frame = 1 
Query: 3814 LEGVKNIRDLSSIEGYGIAPGRVFRTGHLSAATEGDAKTLRDSTGLRTLVDLRSATELGKDEQIHGDIYEGFVNIGGGEHGGTGVWEGQAWDEAISEEEXXXXXXXXXXXRQNAGSRRRYFVSLIDESIYKKGVFQRLRRRHKAAVMALAPATMVSRRCTQKARDIFMRKINAGGLVLLNELLLQYSGDGINRVLRLLASKDRHPVALYCTAGKDRTGLVVALTLAVLGVPDQAIVDDYAKSDAAYKELADRDAMVGALSQQDLDPDTFLGAPPHVMEDVLRFIRVKYGSIDDYLDSIGFDAEWRARLRSAL 4749
             E V+N RD+++     + PGR++RTG  S +T  D K L  +  + TL+DLRS  ELG D  +H  +Y  +  +   +          +W +A+   E           +Q      R+ +SLIDE  Y  G+  +     KA ++AL  A+ VSRR    A ++ + +I AGGL LLNE+LL   G  I R L+L+A  DRHPVALYCTAGKDRTGLV AL L+  GV D AIV DYAKSDAAY +L D+ AMV AL Q DLD + FL APP VM   L  +R ++G +D YLD IGFDA WRARLR+AL
Sbjct:   49 FEKVRNFRDIATACPGLLKPGRLYRTGFPSESTPSDLK-LWSAIDISTLIDLRSPKELGMDTLMHSPVYAPYETVDLNQESSG------SWRQAVLSTEVETTAEDFTPTKQ------RFLLSLIDERKYVSGLVLQAEIIDKAWLVALIGASAVSRRARAHATEVLLERIKAGGLPLLNEMLLLQGGPQIARALKLIADADRHPVALYCTAGKDRTGLVAALALSAAGVDDAAIVADYAKSDAAYAQLEDKRAMVAALDQHDLDSEKFLRAPPEVMVATLAGLRARHGGVDAYLDGIGFDAAWRARLRAAL 347
[Close]
BLAST of mRNA_P-littoralis_Contig915.19.1 vs. uniprot
Match: K0T595_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T595_THAOC)

HSP 1 Score: 238 bits (607), Expect = 1.960e-65
Identity = 151/366 (41.26%), Postives = 206/366 (56.28%), Query Frame = 1 
Query: 3781 TDVFKEDEPYVLEGVKNIRDLSSIEGYGIAPGRVFRTGHLSAATEGDAKTLRDSTGLRTLVDLRSATELGKDEQIHG-DIYEGFVNIGGGEHGG---------TGVWEGQAWD---EAIS------------------------EEEXXXXXXXXXXXRQNAGSR---RRYFVSLIDESIYKKGVFQRLRRRHKAAVMALAPATMVSRRCTQKARDIFMRKINAGGLVLLNELLLQYSGDGINRVLRLLASKDRHPVALYCTAGKDRTGLVVALTLAVLGVPDQAIVDDYAKSDAAYKELADRDAMVGALSQQDLDPDTFLGAPPHVMEDVLRFIRVKYGSIDDYLDSIGFDAEWRARLRSALLTE 4758
            T V  ++    LE VKN RDL+S     I PGRVFR G +S ATE D + L +   ++TLVDLRS TEL  D  +   +++  F ++   E G          T + + +  D   EA++                        EEE            Q+A  R    R+FVS+++E  Y +G   +LR+R     +  +P T+VS++     +  F+ +IN+GGL +LNELLL +   GI  VL L++ K+RHPVA YCTAGKDRTG++ A+ L++LG  D AIV+DY+ S   Y E+ D  AMVGALSQ+ LD  TFLGAPP VM D L  IR  YGS+++YLDSIGFDA+ R RL+ AL  E
Sbjct:   28 TAVLCQERNLPLEKVKNARDLASAHNSPILPGRVFRIGRVSDATENDLEVLFNQNQVKTLVDLRSPTELKDDPTLERPEVFSNFTDMVFYERGRMVKELRGEETRMNQKKRRDRVMEAVNGVPPLVLRFVDNYFGPEREIDDDDEEECIDCIEAAKLIEQSARRRDRKERHFVSIMNELKYVRGTLSKLRKRDVVKTIIKSPTTLVSKQARDDIKKPFLDEINSGGLPMLNELLLTFGAPGIKYVLDLISDKNRHPVAFYCTAGKDRTGVIAAVILSLLGAEDDAIVEDYSLSANVYAEMNDHKAMVGALSQRSLDAKTFLGAPPQVMRDTLTNIRESYGSVEEYLDSIGFDAQCRDRLKYALTEE 393
[Close]
BLAST of mRNA_P-littoralis_Contig915.19.1 vs. uniprot
Match: A0A448ZIR0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZIR0_9STRA)

HSP 1 Score: 236 bits (603), Expect = 2.680e-64
Identity = 141/345 (40.87%), Postives = 194/345 (56.23%), Query Frame = 1 
Query: 3814 LEGVKNIRDLSSIEGYGIAPGRVFRTGHLSAATEGDAKTLRDSTGLRTLVDLRSATELGKDEQIHGDIYEGFVNIGGGEHG----------GTGVWEGQ-------------AWDEAISEEEXXXXXXXXXXX-------RQNAGSRRRYFVSLIDESIYKKGVFQRLRRRHKAAVMALAPATMVSRRCTQKARDIFMRKINAGGLVLLNELLLQYSGDGINRVLRLLASKDRHPVALYCTAGKDRTGLVVALTLAVLGVPDQAIVDDYAKSDAAYKELADRDAMVGALSQQDLDPDTFLGAPPHVMEDVLRFIRVKYGSIDDYLDSIGFDAEWRARLRSALLTE 4758
            LE VKN RDL+      I PGR+FRTG L  A+E D + L    G+ TLVDLRS TEL  D+ +  + ++GF N+   E+G            GV   +             A D+  +E+E                   ++     R+FVSL++E  Y +G   ++R+R  A  +  AP   +S+R     ++ F+ +IN+GGL++LN+LLL++   GI  VL L+A  DRHPVA YCTAGKDRTG++ A+ L++ GV  + IV+DY+ S   Y E+ D  AMVGALSQ++LD  TFLGAPP VM D L  I   YGS++ Y D IGF  E R +LR AL  E
Sbjct:   99 LESVKNCRDLACTSSSSILPGRIFRTGRLGDASEKDRELLFKDLGISTLVDLRSPTELRDDDALMAECFDGFTNLVWIENGRRRDGCVRELAAGVSPVEKARKLRLSKKQLDASDDLAAEDEMCEVGCDDPLTLPAERALTKSKDRNERHFVSLMNEFKYVRGTVTKVRKRDIAKAIIKAPGAFLSKRIWNSLKEPFITEINSGGLIMLNDLLLRFGAPGIKYVLDLVAESDRHPVAFYCTAGKDRTGIIAAIILSICGVKSEDIVEDYSLSANVYAEMKDHKAMVGALSQRNLDAKTFLGAPPEVMADTLIAIEENYGSVEGYCDYIGFGPERREKLRKALTEE 443
[Close]
BLAST of mRNA_P-littoralis_Contig915.19.1 vs. uniprot
Match: A0A1E7FVC3_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FVC3_9STRA)

HSP 1 Score: 235 bits (599), Expect = 5.430e-64
Identity = 140/343 (40.82%), Postives = 193/343 (56.27%), Query Frame = 1 
Query: 3814 LEGVKNIRDLSSIEGYGIAPGRVFRTGHLSAATEGDAKTLRDSTGLRTLVDLRSATELGKDEQIHGDIYEGFVNIGGGEHGGT----------GV----------WEGQAWDEAISEEEXXXXXXXXXXXRQNAGS--------RRRYFVSLIDESIYKKGVFQRLRRRHKAAVMALAPATMVSRRCTQKARDIFMRKINAGGLVLLNELLLQYSGDGINRVLRLLASKDRHPVALYCTAGKDRTGLVVALTLAVLGVPDQAIVDDYAKSDAAYKELADRDAMVGALSQQDLDPDTFLGAPPHVMEDVLRFIRVKYGSIDDYLDSIGFDAEWRARLRSALLTE 4758
             E +KN RDL +     I  GR+FRTG L  ATE D K L +  G+ T+VDLRS TEL  D+ +  DI+ GF ++   E+G            GV          ++    D+ +S EE              AG         + R+FVSL++E  Y +G   ++R+R  A  +  AP   +S+R     ++ F+ +IN+GGL++LN+LLL++   GI  VL L A  DRHPVA YCTAGKDRTG++ A+ L+V G   + IV+DY+ S   Y E+ D  AMVGALSQ++LD  TFLGAPP VM D L  ++  YG ++ Y D IGF  E R +LR AL+ E
Sbjct:   82 FEKIKNCRDLGATASSPIVAGRIFRTGRLGDATEADQKILLEGLGITTMVDLRSPTELRDDDALMADIFRGFTDLVWIENGRRRDGCLKELKPGVSPVEKSRKSRFKKGGDDDVVSAEEEMCDVGCDDPQTVPAGRSLTKSGDRKERHFVSLMNEFKYVRGTVTKVRKRDIAKAIIKAPGAFLSKRIWNSLKEPFITEINSGGLIMLNDLLLRFGAPGIKYVLDLCAESDRHPVAFYCTAGKDRTGIITAIILSVCGAKLEDIVEDYSLSANVYAEMNDHKAMVGALSQRNLDAKTFLGAPPEVMADTLLAMKENYGGVEGYCDWIGFGPERREKLRKALMEE 424
[Close]
BLAST of mRNA_P-littoralis_Contig915.19.1 vs. uniprot
Match: A0A7S1VXA0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VXA0_9STRA)

HSP 1 Score: 236 bits (601), Expect = 1.650e-63
Identity = 148/375 (39.47%), Postives = 200/375 (53.33%), Query Frame = 1 
Query: 3781 TDVFKEDEPYVLEGVKNIRDLSSIEGYGIAPGRVFRTGHLSAATEGDAKTLRDSTGLRTLVDLRSATELGKDEQIHG-DIYEGFVNIGGGEHGGT-------------------------GVWEGQA-------------------------WDEAISEEEXXXXXXXXXXXRQNAGSRRRYFVSLIDESIYKKGVFQRLRRRHKAAVMALAPATMVSRRCTQKARDIFMRKINAGGLVLLNELLLQYSGDGINRVLRLLASKDRHPVALYCTAGKDRTGLVVALTLAVLGVPDQAIVDDYAKSDAAYKELADRDAMVGALSQQDLDPDTFLGAPPHVMEDVLRFIRVKYGSIDDYLDSIGFDAEWRARLRSALL 4752
            T    E+     + +KN RD++S+       GRV R G  S A+E D   L +   L+TLVDLRS TEL  D  +   ++++ FV++   E  G                          GV  G +                          +E+  + E            +    + R+FVSL++E  Y KG   +LR+R  A V+  +P+ +VS+R  +K +D+F+ +IN GGL +LNELLLQ+   GI  VL + A K RHPV  YCTAGKDRTG++ AL L+VLGVPD+ IV+DY+ S   Y E+ D  AMVGALSQ++LDP TFLGAPP VM D L  IR  YGS+D YLD IGF  E R +L+ ALL
Sbjct:  115 TKTICEERNIKFDEIKNARDIASVNHSPAIGGRVLRLGRPSDASESDISILLNDLKLKTLVDLRSPTELKDDPTLERKELFKDFVSLVWIERNGPNGRVIEMKPGQPRIKKSVRKRDVVKGVVNGISSAFVNTFMHLATPNDDQIXXXXXXXXNESGLKVELSPEELCDCGVSERCDRKERHFVSLMNEFKYVKGTLSKLRKRDIAGVLLRSPSAIVSKRAREKVKDVFLDEINDGGLPMLNELLLQFGAPGIRYVLEICADKTRHPVGFYCTAGKDRTGMITALILSVLGVPDEDIVEDYSLSANVYAEMNDHKAMVGALSQRNLDPKTFLGAPPSVMRDTLAGIRETYGSVDGYLDYIGFGEESRKKLKEALL 489
[Close]
BLAST of mRNA_P-littoralis_Contig915.19.1 vs. uniprot
Match: A0A7S4ER05_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ER05_9STRA)

HSP 1 Score: 234 bits (596), Expect = 2.540e-63
Identity = 141/345 (40.87%), Postives = 195/345 (56.52%), Query Frame = 1 
Query: 3814 LEGVKNIRDLSSIEGYGIAPGRVFRTGHLSAATEGDAKTLRDSTGLRTLVDLRSATELGKDEQIHGDIYEGFVNIGGGEHG----------GTGVWEGQAW-------------DEAISEEEXXXXXXXXXXX-------RQNAGSRRRYFVSLIDESIYKKGVFQRLRRRHKAAVMALAPATMVSRRCTQKARDIFMRKINAGGLVLLNELLLQYSGDGINRVLRLLASKDRHPVALYCTAGKDRTGLVVALTLAVLGVPDQAIVDDYAKSDAAYKELADRDAMVGALSQQDLDPDTFLGAPPHVMEDVLRFIRVKYGSIDDYLDSIGFDAEWRARLRSALLTE 4758
            LE VKN RDL++     I PGR+FRTG L  ATE D + L  + G+ TLVDLRS TEL  D+ +  + +E F N+   E+G            GV   +               D+  +E+E                   ++   + R+FVSL++E  Y +G   ++R+R  A  +  AP   +S+R     ++ F+ +IN+GGL++LN+LLL++   GI  VL L+A  DRHPVA YCTAGKDRTG++ A+ L++ GV  + IV+DYA S   Y E+ D  AMVGALSQ++LD  TFLGAPP VM D L  I   YGS++ Y D +GF  E R +LR AL  E
Sbjct:  103 LEKVKNCRDLAATSSSPILPGRLFRTGRLGDATEKDREFLFKTLGITTLVDLRSPTELRDDDSLMAECFEDFSNLVWIENGRRKDGCVRELAVGVSPVEKSRKLRLSKKKVDPSDDIAAEDEMCEVGCDDPTTLPAGRALTKSGDRKERHFVSLMNEFKYVRGTVTKVRKRDIAKAIIKAPGAFLSKRIWNSLKEPFITEINSGGLIMLNDLLLRFGAPGIKYVLDLVAESDRHPVAFYCTAGKDRTGIITAIILSICGVKSEDIVEDYALSANVYAEMKDHKAMVGALSQRNLDAKTFLGAPPEVMADTLIAIEENYGSVEGYCDWLGFGPERREKLRKALTEE 447
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig915.19.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT91_ECTSI9.600e-16766.80Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2UX35_9STRA3.940e-7746.15Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W7TPH7_9STRA7.710e-7247.28Tyrosine-protein phosphatase family, C-terminal do... [more]
A0A7S2NYU5_9STRA1.650e-6744.28Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A836CH30_9STRA4.590e-6745.51Protein-tyrosine phosphatase-like protein n=1 Tax=... [more]
K0T595_THAOC1.960e-6541.26Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A448ZIR0_9STRA2.680e-6440.87Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A1E7FVC3_9STRA5.430e-6440.82Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S1VXA0_9STRA1.650e-6339.47Hypothetical protein (Fragment) n=2 Tax=Ditylum br... [more]
A0A7S4ER05_9STRA2.540e-6340.87Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig915contigP-littoralis_Contig915:50000..58932 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FT91
PFAMsY_phosphatase3
Model size2641
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons8
Evalue4.93e-183
EggNOG OGs2AP1J@1|root,2RZFS@2759|Eukaryota
Ec32 ortholog descriptionTyrosine/serine-protein phosphatase IphP-type
Ec32 orthologEc-06_003660.1
DescriptionPfam:Y_phosphatase3C
Cds size1416
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig915.19.1prot_P-littoralis_Contig915.19.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig915 53345..57780 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791825.4547858-UTR-P-littoralis_Contig915:49999..500721680791825.4547858-UTR-P-littoralis_Contig915:49999..50072Pylaiella littoralis U1_48UTRP-littoralis_Contig915 50000..50072 +
1680791825.564565-UTR-P-littoralis_Contig915:57780..589321680791825.564565-UTR-P-littoralis_Contig915:57780..58932Pylaiella littoralis U1_48UTRP-littoralis_Contig915 57781..58932 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791825.469853-CDS-P-littoralis_Contig915:53344..539591680791825.469853-CDS-P-littoralis_Contig915:53344..53959Pylaiella littoralis U1_48CDSP-littoralis_Contig915 53345..53959 +
1680791825.4848912-CDS-P-littoralis_Contig915:54849..551311680791825.4848912-CDS-P-littoralis_Contig915:54849..55131Pylaiella littoralis U1_48CDSP-littoralis_Contig915 54850..55131 +
1680791825.4985225-CDS-P-littoralis_Contig915:55681..557951680791825.4985225-CDS-P-littoralis_Contig915:55681..55795Pylaiella littoralis U1_48CDSP-littoralis_Contig915 55682..55795 +
1680791825.5124025-CDS-P-littoralis_Contig915:56083..561771680791825.5124025-CDS-P-littoralis_Contig915:56083..56177Pylaiella littoralis U1_48CDSP-littoralis_Contig915 56084..56177 +
1680791825.5256991-CDS-P-littoralis_Contig915:56610..567561680791825.5256991-CDS-P-littoralis_Contig915:56610..56756Pylaiella littoralis U1_48CDSP-littoralis_Contig915 56611..56756 +
1680791825.5434647-CDS-P-littoralis_Contig915:57305..573771680791825.5434647-CDS-P-littoralis_Contig915:57305..57377Pylaiella littoralis U1_48CDSP-littoralis_Contig915 57306..57377 +
1680791825.554358-CDS-P-littoralis_Contig915:57687..577801680791825.554358-CDS-P-littoralis_Contig915:57687..57780Pylaiella littoralis U1_48CDSP-littoralis_Contig915 57688..57780 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig915.19.1

>prot_P-littoralis_Contig915.19.1 ID=prot_P-littoralis_Contig915.19.1|Name=mRNA_P-littoralis_Contig915.19.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=472bp
MPQRLPKSSTPVSFTTARACTVYVILVLHTGVPASSLTFTPSPITNRSVD
HADHHRHRSTNSNNIINDNNGRTSSSSWSSPACSRRGRKQRGPSLLFAQL
RSDALFGNHDARGGGGGGRSSSGGRGRGGGGTPPDTTKRSATAAATDVFK
EDEPYVLEGVKNIRDLSSIEGYGIAPGRVFRTGHLSAATEGDAKTLRDST
GLRTLVDLRSATELGKDEQIHGDIYEGFVNIGGGEHGGTGVWEGQAWDEA
ISEEEERKQGTVVVEERQNAGSRRRYFVSLIDESIYKKGVFQRLRRRHKA
AVMALAPATMVSRRCTQKARDIFMRKINAGGLVLLNELLLQYSGDGINRV
LRLLASKDRHPVALYCTAGKDRTGLVVALTLAVLGVPDQAIVDDYAKSDA
AYKELADRDAMVGALSQQDLDPDTFLGAPPHVMEDVLRFIRVKYGSIDDY
LDSIGFDAEWRARLRSALLTE*
back to top

mRNA from alignment at P-littoralis_Contig915:50000..58932+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig915.19.1 ID=mRNA_P-littoralis_Contig915.19.1|Name=mRNA_P-littoralis_Contig915.19.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8933bp|location=Sequence derived from alignment at P-littoralis_Contig915:50000..58932+ (Pylaiella littoralis U1_48)
TGCGTCTCTACTGCTGTTGTTGCTGCCACTTTCGGACAGCAGACACACGT
TTCATTTAGTCTACAAGCATCAGGTCAGTGGTTACTCGTAAGGTGAAGAT
TGTCATGCTGCTCGAGTTGTAATATCTGTAGATGTCGTGCTTCTTTCCGA
AGTGACGAGAGGATTGGTTCCTCACACCGAACGGGCCTACGTGTTCGTTT
ATATGCTGCATCTTGTTTGTAAGTTAGTGACTGCGGCACATAACCCTGTG
TACCCCCGAAAGGTGCATACTGCTGTACTTGGAGTCGAGACGAGATGGGA
TGACAACACACACAAACATCAGCTCACACGCTGTAACCTGAACCAGTAGC
AGCCTACACCGCTGTTTGACGTTCGAACCGCTGTACGTATGGTAGAGTAT
AACACACACACACGTATGGTAGAGTATAGCAATAAAGTACAGCAGTATCG
ATGGACAACAGAGTACGAATTGCCGTATACCTCGTACTAAGTACTTTAGT
TGCAGAGCAAGAGGGTTAGAAGTCAAGCCCCATTAACATAGACCGCTCGC
CCCGGTGGACTAGTGGTCCCCCGTTAACCACTAGATGCAGAGGAACGGGG
TTCGATTCCCGGTGAATGTGTTCCTTTGCTACTGTGAAAGCGGCTATGCT
ATTACTAAAAGCAGATTCGGCTTCGCCGACGGGGGTACAAGTAAGGACCG
CGGGTTCCTGCTCGCGAGAAAAAATCTCATTCATGTATCACAGAAGGAAG
GTGGGGGTATCTCCTCCTGTGTTGACCTTCCTCCTGTGTGACCCCGTCGA
TGGGCCTAGCCTGTAGTTTGAACCGCAGGGTGCAGACTAGTGTGCCAGAG
AATATGGGATGACAATACATTTCGCTTCTCGTGGGAGTGTCCCGACTGCC
GTTGGTTACCGAAGTCGCGTTATATAGTGTTTTCCTGTATCCACGGAGGA
ACGCGTGTTGAGAAGCAGCGGACCGAGTTTTTTTTCGCTTGTTGGTCACA
AACCTCTGCCGTGCTTTGCCGCTGTTGTACCATGTCTGACACCGTACACA
TTTCTTTACCAAAAAGTGTAGTCACGAGTGAAGATGGAAAGCGTGAGACA
ACAACAGACACATGTGCTGCTGCCTTTAAGAAAAATCGCCATTTTTTTTT
ATAGCGACAAAAGTTGTCGTTGCACGGAGCCCCCGTCGTCGATTTTCCTG
TGACACATGCACATCAATCTGCTGGTTCTCGAGCTTTAGTGCTGATCCAA
AATTATAACAATGTTTTTTGGGTAGTGCATCGACCAAGGTACACACTCTG
TGAGTTTCAGCCCATTTGAGTTTTCTTCTTTGTCACAACCTTGATCTAAA
GTTTTTTTGGAGCACCAAACGATGAAATTTTGGCTAGAGTTTTGGAGGTA
GACATTTTGTTGTTCTCGTTTAAGGAATATCTGTAAACCACTGGAGTTTA
GACTGGTTTTGGTCGATATTAGGCAACTTTTTCAAGCTCATTGTCAGCGC
TGTGGTGCTAATCCTAAATTTCGCCAACTTTTTTTGGGTAGTACACCGAC
CAAGGTGTACTCAGCCCATTTGGTTGTTCTACCAGGTCACAACCTTGGCG
CAAAGTTTGTCGCCCGAGAACCAAAAACGAGCTCCAGACGCACAGAAAAA
CGGCTTGCTTCCAGTTGCGATGTCGCAGCATATCTGCAGTTTGGAGCAAA
ACCATAGCATGTAAGCTATTGGAGAGGTAGAACACGACCCTCTAGAGACC
TCCTGTCAATATCGTAGCAAGCCGGGGTCTGTGTGAGGAGTACTGCCGGC
GACAAAGGTCATGACCCTTAATGGTGTTCGCAGCACAAATTCACAAATCT
GAGAGGGGCTCAGGGTTTGGTCAAGTGGTACCCGCCCAAAGCTTTTGTCG
GTATCAAAAAAAAAAGCACCCAAAGCAGCACATGTGCAGAGTCGACGAAA
ATTACAGCAGGATGCCTCACGACCCTTTCAAAAACATGGAGCAGTAAATA
AGGGTACCTACCTCGGGCATAAACCGGCCCAATTATTAAACGTTTATGCA
CCGCTGCAAAGCGGGCAGCTTCAAAGGCTGCTGGAAGCTTAACCCTTCTG
GAACTTCTGAGGTGATAAATGCATCAAAAAAATTAATCATAATATATACT
CGTATTTTTTTATATAAGCCAGTCTCTTCGGGACGGGGACAGAAACAAAA
AATTCCCGAACCCCATCACGTTGGGAGTTGATCAAGCATTCCGGCTGCAC
TCAGATACGGGCAAGAGGACAACCAAACACCGCTCACAGCTGCTGCTGTG
TGTGTGGTCAAGGGGTGTGAGGGTGCCCAGCAAGACTCAGTCAACATCGT
AAATCCCCGGCATGTCGAAATCCGAAATCATCTCGTCTGACACGGTATAA
TATACACTTCGCAGTGTATCATATTTTTCTGGAGTGCAACACCATACCAA
CCAGCATTCATTATAGCAGCACTACTCCTACTACAACTACTGCTACTACT
GCCGCTGCTGTACAGCAGTACATCACATGCCATATGATACCTCCTCCCTT
GTTGGTATGACACAACAAGCAAGAAGAGCAGTAGTAGAGAGTCATACCTC
TATGTATGATACATCGTGGTATCTTATTTATTACTTCGAAATCTTGTTTG
GTCAAAACCCAGCGACAGCAGCAGCAGCAGCATGTACGTAGACATCATGT
AGATACATGCGATTGGTTGCTAGATTACTACTACTGCGGCTGCTGCTGCT
GCTGCTGCCGCTACCAGTACCAATGATGTGCCTATGTGCGAGAAGGAAGG
ACCGACCTTCAGGCACGGGGCCCCTACGCAAAAGTATGTTTAGCAGGCCG
GGAGCTACAGCGGGAAACGAGTAACTCCTTAGCTGTAACTCTTTCTCCTT
ATTATCTTGTTTTGAGGGGACTGGATACTTTAAGCGCTATTGATGGTTAG
AACACGTTGCACGACGCCTGAGAGCTAGCCGCGGCATCTCGACCACCGGG
TATCCCTTCTGTACTCTCCAGGGACGTAACCAGCCCGCTGTGAGCCCCCG
TCAGGGGCCCTGGCTGTATATCTTTGTTGTGCGGTTGTGCACATTTTCTC
TTGGTTTCGTTACAGCTGTACGTTTGAAAGGGACATTTGAGCCATATATT
TTTTTCTCGGGGGAACATTGTATGGTTCTGATTTGGAACCCGGGCTGTCC
GTGTGAAAAGGAACAAAACACCCTGGTCCCAGAAGGGTTAACGTAGAGGC
GTATCTCAGTAGCACGCTTCGCTTGAAACCACCGTGTCAAGCCAACCCCC
TGCCCCCCCCACACACACGGCGGATGCTCCCGAATCTCCAAGCAGATGCC
GCAACGCCTCCCGAAATCATCAACGCCTGTGTCCTTCACGACAGCAAGGG
CATGCACCGTCTATGTAATACTAGTTCTCCACACAGGAGTCCCTGCGTCG
TCGCTGACTTTCACGCCGTCGCCGATAACGAATCGCTCCGTGGACCACGC
CGATCACCACCGTCACCGCTCCACCAACAGCAACAACATCATCAACGACA
ACAACGGCCGCACAAGTAGCAGTAGCTGGTCGTCACCCGCGTGCTCGCGA
CGAGGACGCAAACAACGCGGACCGTCATTGTTGTTTGCACAACTGAGGTC
CGACGCGCTTTTTGGCAATCACGATGCTCGCGGCGGCGGCGGCGGCGGCC
GCAGTAGCAGCGGAGGGCGAGGACGAGGAGGCGGAGGGACGCCCCCAGAC
ACGACGAAGCGTTCCGCAACAGCGGCAGCAACAGACGTTTTCAAGGAAGA
CGAGCCGTACGTGTTGGAGGGCGTGAAGAACATTAGGGACCTGAGTTCGA
TCGAGGGGTACGGCATCGCTCCCGGGCGCGTTTTTCGCACGGGACACCTG
TCCGCTGCGACGGAGGGAGACGCGAAAACGCTCCGAGACAGCACCGGCCT
GCGAACTTTGGTAAGCACGGGCGGAGAGTAGTGATAGTTGGTAATGGTAC
GAAGCACCAAACATGCCCGGATCCGTCCCTTGAGCGTGCTGCTTGTGCGG
GTAGAGAGGGCGTGGGCCTTTGACCGTCAAATGGGTCGACGTGGAAGGGG
GGAAGGGGCCAGAGTCACTCCGAGCTCATGGTGTCGTCACGTGCCCACTG
TTGCGTACGCCCGGGCGCGTGGGGAGGGTAGGACTAGAGTTGTGGAGGCT
GGAACAGCAGTCTACTGATGTAGATTGAAATGAAATGCACTAAGATGGAA
TCACGTCTCCTTCGTATTACAGTAGCACATCAAAGTTGCCAATGGTAGAT
GTAGGTTGTCTTGGAGCAATCAAGGGGCCGCGCAAAAATCTCACCTTGGC
TGATGCTCCTGGATTTCTACTGCTGTTCTGACGAACGGTTCTTGCATGCT
GAACTACCGATGTCCGCGTATTCCACTCAAGATCTGGAATGCAGCTTTGC
ACGACGCGGGCATATGGAGCTCGCACAAGAAACTCATGCCGTCCCGGCTT
CTTACGACACCTAGTCGGCGCAATTTTTGTGGACTTTCTTGCCAAACGTT
TGTTGATAAGCCATGCCACCACTATTCAATCGCTTCTTTTTAGCGTGAAG
GGCTCGCGCGTTCTCATGTTTTTTCTATATTATGTTGTATATTACCATAG
ACTATTTGAGTATTGCAAGGGTTCCTCACCCGTATTATGCTCATATATGC
AAGTTCTTGCCTAGAGTGCGCAAGAAGAATCCTGAAGTTCTGCTGACGAG
ATCCTTGTGCGGTGTATGTAGCGATAGCGCGGTTCTGTTCTTCAGCTCGT
AAATGCCTCAGGCACAGTCATCGCCCACTCTTTCTCCCGGTGTTTGTCAG
GTCGATCTTCGGAGCGCAACCGAATTGGGCAAAGACGAGCAAATTCACGG
TGATATCTACGAAGGTTTCGTTAACATCGGGGGGGGAGAGCACGGCGGCA
CGGGAGTCTGGGAGGGGCAGGCGTGGGACGAGGCAATTTCGGAGGAGGAG
GAGAGGAAGCAAGGAACGGTGGTCGTAGAAGAACGACAAAACGCGGGGTC
GAGGAGGAGATACTTCGTTTCTTTGATTGACGAGAGCATTTACAAGAAGG
GAGTGTTCCAGAGGCTGCGCAGGCGGCACAAGGTTCGTGCGCTGTAATCT
TCTTGCTACTGCTGTCGTGCGGGGTTCAGGAGCAGGGATGCGCCGGTGTA
GGTGGTGGGGGGGGGGGACGGGGGGGGGGTTGCTAGTCGTCAGTTACTGA
AGTTCGCTTTTGCTACGATGGAAGGGATACAGCAAACGACGTATCTAGGC
ATGCCCCTTACAAAGTTCGGAGTGGTGTTCGACACGTGCCAGTCGCACCG
GGTTCTGCCCTCTGGCCGCTTAAACTAATGCGAAAGGCGAAAAGTGAAGG
ATATGATTTGGCAGGGTTGCTAAGGTGAATGAAGCCTTGCCGGATTCAGT
TTTGTGGTAGCGGAACGGGCCTCTCCTCCCCGTTCCTCGGCAGCTTGCCT
TGTCCTTGCCTTATTTCTTATTTCCCCTGGTTGGATGTGTCCACTACCTC
ACATGTTGCACACTTGTATGTTTCTTGCCTTCGAGTCGAGTTGCTTGTCT
TTCTCCCAACCTACTTTGTCCGAGTTGCTCTCTGACGAAATCAGATCAAA
TGTTCTTAACCCCTCCCCCCCCCCCCTGACAGGCGGCGGTGATGGCGCTC
GCCCCAGCGACGATGGTGTCCCGTCGCTGCACGCAAAAGGCGCGCGATAT
ATTTATGCGAAAGATCAACGCCGGCGGCTTGGTGCTGCTGAACGAGGTGG
GAGATGAAGTTCATCTCACGACGACAACGGCAACAAGACCGGAAACTTGA
ACTTGTACACAAACAGCAGCAGACGTGTTTTTTTAAAGATTTTTGAATGA
TGAGGAACCTTCGGTGTGCTAGTCGTGTGCGCGGTTCGCTGCACGACAGA
CCCTTCCTCCCCCTCGACGCACGCGAGCAAGCTCGTGTGCACAGGAGGGG
AGCTCGTGGTTTGTGTATTGAGTTTTCGATATCTCACCCATGTACCTGTT
GCTGCTCGCTGCATAACGTCTCGTTTGTCGCCAGCTGCTCCTCCAGTACT
CGGGGGACGGGATTAATCGCGTGCTCCGCCTGCTGGCGTCGAAGGACCGG
CATCCCGTGGCGCTCTACTGTACTGCAGGTGTGCTATTTGCCGCGGTGGC
GATGCAGGTTGCGAAAAAAGTATTATTCCAATCTTCGATGCTTGGCTCGG
CAGGGCGTGGTAGTAAGGGTTGTACATTTCGGATGGGAAGGGATGCATAC
AAAAGTCAGGAACCAACAGCTCAGAAGTTGTCCTTCGATTGGCGACATCG
GACACGGCGGATGGCTGCAGTGCGACTGCTTTTGATCGCCACTCAAAAAT
AGCCAGGAGCAACGCCGCTGAGCTGCGCTGTTGTTGCTGCTGCGAAAACC
ACACTCAAGGGTGAGGTTCATGCGTGATCGATCGATTTGTTCAGCTCCGC
GTAGGCACGGTGGAGAAGGCCTCTGCACGGCTACCATGCTCGCGCCAACC
GCTTCGATTTACTTTGTCCGGCGCGTGTCTCGCTATCTTGTCTCCCTGCT
TGCATAAACAGGGAAAGACCGCACGGGGCTAGTGGTAGCGTTAACTCTGG
CGGTTCTTGGGGTGCCTGACCAGGCGATTGTGGATGATTACGCCAAATCC
GACGCGGCTTACAAGGAGCTCGCCGACAGAGATGCTATGGTTGGGGCGCT
GTCGCAGGTCCGTTTGTTTCGGGCCGCATGAAATGCGCATCTTTACTGGC
TGGTACAAGGTTAGCATCACAGGGGCACAAGATGAAATGAAATCGGCACC
AAAAATTGACCCGCGTTGGTGAACGCCCAGGGCGCGTGTGCAACACCCGA
GCGGGATCAAAAGCGCACACAGGTGGAATAGGAACCCACACGCTGTCGTG
CTGGCATCTTCGATATGGACAGAGTTGAGCTTGAGGGACCAACTCCAAGT
TTGTGCACACGCACCCAAGCACGAATGCGACCCTTGCTTCTTTGTAGTTG
GATGTGGAGCGGTCACTGTTCAAGGTTTCTCCGGTTGGTGTGTTTGTATT
TTCAACCCTACCCGCTCTCTTTCATCCCTCTTCCACTCCGTCGCCCCCCG
CCCCGCTGCCCCATGCTGCCGCAACCCTCTCGATACGTGTGCTGGCGCGT
CTCAATTTTATTTTATTTTATTTTTTTGCATGTTCGCTTCGGCGGTTTAT
GGGCTTCATACTTGTGGCGTACGATTTGAAATAATCTTGGATTGTTCACT
TTTCAGCAAGACTTGGATCCAGACACGTTTCTGGGAGCCCCACCCCACGT
GATGGAGGACGTCCTCCGCTTCATTCGGGTGGGTTGTGTGTGCGTGTCTG
TGTTTTTGTGTGTGTGTTTGTGTGTGTGCTCTTTTTGCAGACGTCATATA
CGCTTTTTTTTCCACCCACGCTGCAACATCGCTTACATACAGTGTATTTC
ATCAGCATAGCGTACTGGTCGGATGATTCAAATCATGTATCAAAACGCGT
GTGGCCGCCCAGTACCAACGTTACCCAATGCCAAAATGCCGAAGCTTAGT
TTGGTTTCGTCTCAGATGTTTGCGTCTGAAAAATATATCGATCCTCCAAC
GCTCCGCTCCATCTGCTTCGTGCGCACTGCATCCATAGGTCAAGTATGGC
TCCATCGATGACTACCTCGACTCGATAGGCTTTGACGCCGAGTGGCGCGC
GCGTCTGCGCAGCGCCCTCTTGACCGAGTAAGCCGCCATAATGGGCGGTG
TCTTCGCGCCTGAGCGTGGGTAGAGTGAGAAGTGCTGCCGAGGTTTAACC
CCCCCCTCTCATGTACCTGGTGTTTTTTTTTTTTTTTGCAGCTCATATCA
TATGATGTCATACATATTGGAGCTGTACTTTTTTTCCGTCACCAGTTTTG
GGCCATCTTTGGATGTCGACAGCACTTACACACTTACACACCTAGACACG
TTGTGGTGCGATATGGCAAAGAAGGGTCAAGGTACGACGTCGAAGGAGAA
TATTTTCAGCATTGTTTTTGTTTTACGGAATGATCAGGAACCGGAGATTT
CAGTATCGGAGATTCCAGTATGGAGACCTATCATCGGCGATAGCTCGTCT
TGCTCCTTGGTAACGATTTGGTAGGTTTTGACCCAGCGATGTCGGTCCCA
TGCAGCAGTCGGTCGGAGCTAATTTAGGGAGTGATTTTTAGTCGGTCTGT
TACCCCCAAGCGACTCACGGTGTCGACTTTTTTCCCAGTTTTGAATTATG
AGGCTCTTGTATATATCTTGACGGTGCGTGTTGGTTTGTATCGTAGTCTG
ACTCCGATTGGACAGGCAAGGTTGGGAAGTTTTCTGTAACGGGAAGCGCA
GAATATAAATAAAACTGCGGTGTGAGTTTTTACGTCGGGCGCGAATCCTG
TTTTTAGCATCATCTCTTTTTCTACTTGTAGCGTGTGTGTAAATATTTCG
GAAGGGGGGTGGCGGGAAAACTGCTGGGGTTTGTCTCATTTTGTCAGCAG
GGTGCCGCCAATTTTGTCTGCTCCAAAGTCAACAACGCGGAAGAACTGCT
GGGCTAGTGCTTTCCATTTTCTAGAGCGCCGCCAACTGTTCTAATCAGAG
TATGAAAACGCGGTGGATTGCCAAAGGTTTTATACTGGTGGTCTGACTGG
GCGTGGAATTTCAATTGTGATACCTCAAACTATAGTCATCTCCAATATCC
TATCATAAAATACGGTCAAATTTACTAAGCTACGAGTTTCATGTTTTGTG
AGAAACACGTTGACATGTTGCCGCGTCTTCAAAGCTATTTTGATGGCCAG
TGTGCGACGAAAAAGCCCCATGTGCGCAGTATAACAGCAGTAGTCTGGTT
GACACAACACAACAAATTTGAAAAAATATCCAG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig915:50000..58932+

>mRNA_P-littoralis_Contig915.19.1 ID=mRNA_P-littoralis_Contig915.19.1|Name=mRNA_P-littoralis_Contig915.19.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1416bp|location=Sequence derived from alignment at P-littoralis_Contig915:50000..58932+ (Pylaiella littoralis U1_48)
ATGCCGCAACGCCTCCCGAAATCATCAACGCCTGTGTCCTTCACGACAGC
AAGGGCATGCACCGTCTATGTAATACTAGTTCTCCACACAGGAGTCCCTG
CGTCGTCGCTGACTTTCACGCCGTCGCCGATAACGAATCGCTCCGTGGAC
CACGCCGATCACCACCGTCACCGCTCCACCAACAGCAACAACATCATCAA
CGACAACAACGGCCGCACAAGTAGCAGTAGCTGGTCGTCACCCGCGTGCT
CGCGACGAGGACGCAAACAACGCGGACCGTCATTGTTGTTTGCACAACTG
AGGTCCGACGCGCTTTTTGGCAATCACGATGCTCGCGGCGGCGGCGGCGG
CGGCCGCAGTAGCAGCGGAGGGCGAGGACGAGGAGGCGGAGGGACGCCCC
CAGACACGACGAAGCGTTCCGCAACAGCGGCAGCAACAGACGTTTTCAAG
GAAGACGAGCCGTACGTGTTGGAGGGCGTGAAGAACATTAGGGACCTGAG
TTCGATCGAGGGGTACGGCATCGCTCCCGGGCGCGTTTTTCGCACGGGAC
ACCTGTCCGCTGCGACGGAGGGAGACGCGAAAACGCTCCGAGACAGCACC
GGCCTGCGAACTTTGGTCGATCTTCGGAGCGCAACCGAATTGGGCAAAGA
CGAGCAAATTCACGGTGATATCTACGAAGGTTTCGTTAACATCGGGGGGG
GAGAGCACGGCGGCACGGGAGTCTGGGAGGGGCAGGCGTGGGACGAGGCA
ATTTCGGAGGAGGAGGAGAGGAAGCAAGGAACGGTGGTCGTAGAAGAACG
ACAAAACGCGGGGTCGAGGAGGAGATACTTCGTTTCTTTGATTGACGAGA
GCATTTACAAGAAGGGAGTGTTCCAGAGGCTGCGCAGGCGGCACAAGGCG
GCGGTGATGGCGCTCGCCCCAGCGACGATGGTGTCCCGTCGCTGCACGCA
AAAGGCGCGCGATATATTTATGCGAAAGATCAACGCCGGCGGCTTGGTGC
TGCTGAACGAGCTGCTCCTCCAGTACTCGGGGGACGGGATTAATCGCGTG
CTCCGCCTGCTGGCGTCGAAGGACCGGCATCCCGTGGCGCTCTACTGTAC
TGCAGGGAAAGACCGCACGGGGCTAGTGGTAGCGTTAACTCTGGCGGTTC
TTGGGGTGCCTGACCAGGCGATTGTGGATGATTACGCCAAATCCGACGCG
GCTTACAAGGAGCTCGCCGACAGAGATGCTATGGTTGGGGCGCTGTCGCA
GCAAGACTTGGATCCAGACACGTTTCTGGGAGCCCCACCCCACGTGATGG
AGGACGTCCTCCGCTTCATTCGGGTCAAGTATGGCTCCATCGATGACTAC
CTCGACTCGATAGGCTTTGACGCCGAGTGGCGCGCGCGTCTGCGCAGCGC
CCTCTTGACCGAGTAA
back to top