mRNA_P-littoralis_Contig915.15.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig915.15.1
Unique NamemRNA_P-littoralis_Contig915.15.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig915.15.1 vs. uniprot
Match: D7FT94_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT94_ECTSI)

HSP 1 Score: 491 bits (1264), Expect = 1.080e-164
Identity = 273/397 (68.77%), Postives = 301/397 (75.82%), Query Frame = 3 
Query:  219 RNALTGASIVALGTGAFLCARAYSKSCSRNTSGTSTSGRGTASFASPKALSAARSNTETPAAXXXXXXXXXXXSEKNNGVGPDRAAETSPPAQKQPCGGCDCGLMEPGPLEGTMHAYERHIIICSGHEDWPKVVEAEESSLAESLFNLCLGAGLILTKKVALAAKQAGAPNNKQVKISACSEPSRGREGTTDVIVYPEGLIYSLSRDDASSLEQFVNVQLIEGRVASQLEPISVSYKKMVLVCTHMSRDKRCGRAGPQVVGEMTKALEAKGVGPDEIAVRGSSHFGGHKYAGVLIIYPQGDWFGLVSKKNASAIVDKCVLGTEGMKANWRGNMASPGTKAQPAKKPKPTAAETTADASPSPVPTTTLKHEPEEQSGSAPVNG----RRPRRESIDGA 1397
            R AL GAS+VALG GA LCARAY  S    ++ T +  RG++S        AA S  +   +           SEK       R A   P A K+PCGGCDCGLMEPGP+EGTMHAYERHIIICSGH++WPKVVEAEESSLAESLFNLCLGAGLI TKKVALAAK+AG P  +QVKISACSEPSRGREGTTDVIVYPEGLIYSLSRDD SSLEQF+NVQLI G VA+QL+P+ VSYKKMVLVCTHMSRDKRCGRAGPQV+GEM KAL+ +GVGPDEIAVRGSSHFGGHKYAGVLIIYPQGDWFGLVSKKNA AIVDKCVLGTEGMK NWRGNMA PGTK +         A   A A+  P PT     EP+  + SA +NG     +PRRES+DGA
Sbjct:    6 RQALAGASLVALGAGALLCARAYGSS----STATGSRSRGSSS--------AAGSEGDVSTSPGRKTAEVKETSEKM------RKAGDGPAAPKEPCGGCDCGLMEPGPIEGTMHAYERHIIICSGHQNWPKVVEAEESSLAESLFNLCLGAGLIFTKKVALAAKKAGVPKTRQVKISACSEPSRGREGTTDVIVYPEGLIYSLSRDDTSSLEQFLNVQLINGEVATQLKPVPVSYKKMVLVCTHMSRDKRCGRAGPQVIGEMEKALQERGVGPDEIAVRGSSHFGGHKYAGVLIIYPQGDWFGLVSKKNAPAIVDKCVLGTEGMKTNWRGNMADPGTKKEXXXXXXXXXA---AAAAAGPTPT----QEPK-SAESASINGGGPTSKPRRESVDGA 376
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BLAST of mRNA_P-littoralis_Contig915.15.1 vs. uniprot
Match: A0A2P6NW20_9EUKA (Altered inheritance of mitochondria protein 32 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NW20_9EUKA)

HSP 1 Score: 144 bits (362), Expect = 5.900e-35
Identity = 88/237 (37.13%), Postives = 132/237 (55.70%), Query Frame = 3 
Query:  546 LEGTMHA-YERHIIICSGHEDWPKVVEAEESSLAESLFNLCLGAGLILTKKVALAAKQAGAPNNKQVKI-SACSEPSRGREGTTDVIVYPEGLIYS----LSRDDA-------SSLEQFVNVQLIEGRVASQLEPISVSYKKMVLVCTHMSRDKRCGRAGPQVVGEMTKALEAKGVGPDEIAVRGSSHFGGHKYAGVLIIYPQGDWFGLVSKKNASAIVDKCVLGTEGMKANWRGNM 1217
            L GT+   Y+RH+I+CSG  DW    E E  +   SL           TK++    K    P+ +   + + CSEP+R  +G  D+IVYPEG +YS    LS           + L  FV+  +++      +    V+++ +VLVCTH +RDKRCGR GPQVV ++T  L  + +  D++A+ GSSH GGHKYA V+++YP+GDW+G ++ KNAS ++D  +         +RG M
Sbjct:   24 LVGTVKKDYKRHLILCSGQMDWTGKPEKESGTFINSL-----------TKEL----KSRNLPDGEPGTLFTLCSEPNRSDKGV-DIIVYPEG-VYSNEEVLSEKGVRYFQVTEADLPSFVD-HILKDEAPPNIHKEKVTWEHVVLVCTHGTRDKRCGRIGPQVVDQLTGMLSERNISSDKVAILGSSHLGGHKYAAVVVVYPEGDWYGQMTAKNASDLMDAYLQCKSLYPPGFRGKM 242
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BLAST of mRNA_P-littoralis_Contig915.15.1 vs. uniprot
Match: L8H8Q7_ACACA (Ferredoxin, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H8Q7_ACACA)

HSP 1 Score: 143 bits (360), Expect = 2.110e-34
Identity = 84/228 (36.84%), Postives = 126/228 (55.26%), Query Frame = 3 
Query:  546 LEGTMHAYERHIIICSGHE--DWPKVVEAEESSLAESLFNLCLGAGLILTKKVALAAKQAGAPNNKQVKISACSEPSRGREGTTDVIVYPEGLIYSLSRDDASSLEQFVNVQLIEGRVASQL--EPISVSYKKMVLVCTHMSRDKRCGRAGPQVVGEMTKALEAKGVGPDEIAVRGSSHFGGHKYAGVLIIYPQGDWFGLVSKKNASAIVDKCVLGTEGMKANWRGNM 1217
            L GT+  YE+H IICSG E  +W   ++ +E S A+      L    I  +K  L  K          K++   E S+G EGT D+IV+PE + Y      A ++   V   L+ G V+ ++  EP      ++VLVC H +RD RCG  GP +V    + L A+G+G D++ VR SSH GGHKYAGV+++YP+GDWFG ++++    ++D  +     +  +WRG M
Sbjct:   51 LLGTVKKYEKHFIICSGTEPDEWGAKIDKDEGSFAQ------LAKQAITARKAELTFK---------FKLTNSDERSKGSEGT-DLIVFPERIRYL--GVTAETMPFIVEDHLVNGHVSERVKHEPFE---SELVLVCCHNNRDTRCGAEGPIIVSAFDRLLAARGLGEDKVMVRSSSHLGGHKYAGVVVVYPRGDWFGFITEQQVEKLLDNYIEHGSMVPEHWRGRM 257
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BLAST of mRNA_P-littoralis_Contig915.15.1 vs. uniprot
Match: UPI0001FE36D4 (hypothetical protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=UPI0001FE36D4)

HSP 1 Score: 140 bits (353), Expect = 1.610e-32
Identity = 67/140 (47.86%), Postives = 97/140 (69.29%), Query Frame = 3 
Query:  747 ISACSEPSRGREGTTDVIVYPEGLIYSLSRDDASSLEQFVNVQLIEGRVASQLEPISVSYKKMVLVCTHMSRDKRCGRAGPQVVGEMTKALEAKGVGPDEIAVRGSSHFGGHKYAGVLIIYPQGDWFGLVSKKNASAIVD 1166
            ++ACSE ++G  GT DVIVYPEG+ Y         + +FV  Q++ G VA  +    V  + +VLVCTH +RD RCGR+GPQV+ ++ + +  + +G D IAVRGSSH GGHKYAGV+++YP GDW+G++S +NA  ++D
Sbjct:  213 VTACSELTKGDFGT-DVIVYPEGIRYL--GVTIEQIPEFVEYQVVRGVVAQNIPHEPVDKRYLVLVCTHGTRDARCGRSGPQVMDKLAELMAERSIGDDTIAVRGSSHLGGHKYAGVVVVYPPGDWYGMLSGRNADKLID 349
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BLAST of mRNA_P-littoralis_Contig915.15.1 vs. uniprot
Match: A0A0M8KAU1_9CHLR (Uncharacterized protein n=2 Tax=Ardenticatenia TaxID=1382928 RepID=A0A0M8KAU1_9CHLR)

HSP 1 Score: 123 bits (308), Expect = 5.660e-28
Identity = 80/225 (35.56%), Postives = 122/225 (54.22%), Query Frame = 3 
Query:  552 GTMHAYERHIIICSGHEDWPKVVEAEESSLAESLFNLCLGAGLILTKKVALAAKQAGAPNNKQVKISACSEPSRGREGTTDVIVYPEGLIY-SLSRDDASSLEQFVNVQLIEGRVASQL--EPISVSYKKMVLVCTHMSRDKRCGRAGPQVVGEMTKALEAKGVGPDEIAVRGSSHFGGHKYAGVLIIYPQGDWFGLVSKKNASAIVDKCVLGTEGMKANWRGNM 1217
            G++  Y+RH I+C+G   W   VE               G G +  + +A A K       ++++++A  EPS G +G  DV+V+P+G+ Y  L  +D  +L   +   L+ GR + +L   P+ V Y   VLVC H  RD+RCGRAGP +V    + L+ +G+  D   V  SSH GGHK+AG +I+YP GDW+GLV+  +   IV + +     + A WRG +
Sbjct:   14 GSVKRYDRHFIVCTGVRHWAPKVEQ--------------GGGFL--QALADATKPLEPHLGQKIRVTASDEPSEG-DGY-DVLVFPDGVRYLGLREEDIPTL---IEDHLLGGRPSPRLAHRPVEVGY---VLVCVHAERDERCGRAGPPLVDRFWEVLDREGLS-DRYRVVASSHLGGHKFAGNIIVYPSGDWYGLVTPADVERIVREHLREGRIVAALWRGRI 213
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BLAST of mRNA_P-littoralis_Contig915.15.1 vs. uniprot
Match: A0A2E0UXF4_9CHLR (Uncharacterized protein n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A2E0UXF4_9CHLR)

HSP 1 Score: 116 bits (290), Expect = 1.930e-25
Identity = 71/225 (31.56%), Postives = 121/225 (53.78%), Query Frame = 3 
Query:  546 LEGTMHAYERHIIICSGHEDWPKVVEAEESSLAESLFNLCLGAGLILTKKVALAAKQAGAPNNKQVKISACSEPSRGREGTTDVIVYPEGL-IYSLSRDDASSLEQFVNVQLIEGRVASQLEPISVSYKKMVLVCTHMSRDKRCGRAGPQVVGEMTKALEAKGVGPDEIAVRGSSHFGGHKYAGVLIIYPQGDWFGLVSKKNASAIVDKCVLGTEGMKANWRGNM 1217
            L GT+  Y RHII+CSGH +WP  ++ +E    ++L +        + K   L A          +K++AC  P+ G +G T ++V+P+ + I  L+ D+  +L  ++   +  G             K ++LVC H +RD RCG A P V+ +M   +E   +  +++ V  SSH GGHK+AGV ++YP G+W+G +++++A+ ++    L  +   A WRG M
Sbjct:   17 LPGTVKYYNRHIIVCSGHSEWPAKIQ-DEGGFIKALSSS-------INKITELNA----------IKLTACDLPAVG-DGET-ILVFPDRVRISGLTEDNLENLINYLRDGIERGLKIESFP------KFLILVCGHQNRDNRCGLAAPGVMQKMMNVIEQFDL-TEQVLVSRSSHLGGHKFAGVAVVYPSGNWYGRLTEQDAANVIKAECLDRQPYPALWRGRM 214
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BLAST of mRNA_P-littoralis_Contig915.15.1 vs. uniprot
Match: A0A1Y1I1V5_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I1V5_KLENI)

HSP 1 Score: 116 bits (291), Expect = 2.410e-24
Identity = 82/233 (35.19%), Postives = 124/233 (53.22%), Query Frame = 3 
Query:  543 PLEGTMHAYERHIIICSGH-EDWPKVVEAEESSLAESLFNLCLGAGLILTKKVALAAKQAGAPNNKQVKISACSEPSRGREGTTDVIVYPEGLIYSLSRDDASSLEQFVNVQL-IEGRVASQLEPISVSYKKMVLVCTHMSRDKRCGRAGPQVVGEMTKALEAKGVGPDEIAVRGSSHFGGHKYAGVLIIYPQ------GDWFGLVSKKNASAIVDKCVLGTEGMKANWRGNM 1217
            PL GT+  YE+H+ + +G  + WP  VE   S+            GL   K  A  ++ AGA   K+     C + S G EG  DV+V+P  + Y L   D   +  FV   L ++G + +  EPI+ S+   V +CTH SRD RCG  GP +V    +A + KG+  + + +RG SH GGHKYAG +IIY +      GDW+G VS  + + ++++ + G + ++  WRG M
Sbjct:   37 PLAGTVKFYEQHVFLTAGDGKKWPAKVEKSTST------------GLP-AKLAAAVSQHAGA---KKTNFMLC-DSSDGAEG--DVLVFPNMVKYRLQPSD--DVAAFVKSALSLDGEITTPSEPITGSH---VFICTHNSRDARCGYCGPLLVAAFKEAAKEKGLA-ESVHIRGCSHTGGHKYAGNVIIYREREGKVEGDWYGYVSPADVTTLLEQHIQGGKIVEKLWRGRM 244
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BLAST of mRNA_P-littoralis_Contig915.15.1 vs. uniprot
Match: W9SPZ8_9ROSA (Uncharacterized protein n=1 Tax=Morus notabilis TaxID=981085 RepID=W9SPZ8_9ROSA)

HSP 1 Score: 114 bits (286), Expect = 1.550e-23
Identity = 78/237 (32.91%), Postives = 116/237 (48.95%), Query Frame = 3 
Query:  546 LEGTMHAYERHIIIC-SGHEDWPKVVEAEESSLAESLFNLCLGAGLILTKKVALAAKQAGAPNNKQVKISACSEPSRGREGTTDVIVYPEGLIYSLSRDDASSLEQFVNVQLIEGR--VASQLEPISVSYKKMVLVCTHMSRDKRCGRAGPQVVGEMTKALEAKGVGPDEIAVRGSSHFGGHKYAGVLIIYPQGD-------WFGLVSKKNASAIVDKCVLGTEGMKANWRGNMASP 1226
            L GTM AY RH+ +C  G E W   VE  ES     L      A     +K  +A K          K++ C           DV+++PE + Y   RD  S ++ FV   L+  +   +   E +  SY   V VC+H SRDKRCG  GP ++ ++ + ++ +G+G D++ V   SH GGHKYAG LI+Y  G        W+G V+  +  A++D+ +   E ++  WRG M  P
Sbjct:   81 LAGTMEAYGRHVFLCHKGPEAWVPRVEGPESDPLPKLL-----AAAFRARKDNIAVK---------TKLTICEGRDEADFADGDVLIFPEMIKYRCLRD--SDVDSFVEDVLVNEKPWASGVQEVLKGSY---VFVCSHGSRDKRCGVCGPVLIAKLNEQVDLRGLG-DQVFVSACSHIGGHKYAGNLIVYSPGPDGKIAGHWYGYVTPNDVPALLDQHIAKGEIIERLWRGQMGVP 297
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BLAST of mRNA_P-littoralis_Contig915.15.1 vs. uniprot
Match: A0A835YVK0_9STRA (Sucrase/ferredoxin-like-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVK0_9STRA)

HSP 1 Score: 113 bits (283), Expect = 4.620e-23
Identity = 65/171 (38.01%), Postives = 98/171 (57.31%), Query Frame = 3 
Query:  699 ALAAKQAGAPNNKQVKISACSEPSR--GREGTTDVIVYPEGLIYSLSRDDASSLEQFVNVQLIEGRVASQLEP-ISVSYKKMVLVCTHMSRDKRCGRAGPQV---------VGEMTKALEAKGVGPDEIAVRGSSHFGGHKYAGVLIIYPQGDWFGLVSKKNASAIVDKCV 1175
            A  A  A AP   +V+I+AC+ P+      GT D+++YPE L+ + S +  ++LEQ          +A    P + V Y+ +VLVCTH SR +RCGR GPQV         +  M +      +   ++++   SH GGHK+AGV I++PQG W+G ++K+NA+ IVD CV
Sbjct:   28 ATTAAAAAAPIPSRVRITACALPTGPLAPAGTVDMMLYPEALLCTRSTEQRATLEQSREAAAAAAALARVGIPTMPVPYEHLVLVCTHNSRSRRCGRTGPQVQPLQINMKVIEAMQERKAQLRMSDTQLSIVACSHIGGHKHAGVCIVWPQGHWYGRLTKENAADIVDTCV 198
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BLAST of mRNA_P-littoralis_Contig915.15.1 vs. uniprot
Match: A0A7W1C6G9_9BACT (Sucrase ferredoxin n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7W1C6G9_9BACT)

HSP 1 Score: 107 bits (267), Expect = 1.040e-22
Identity = 72/207 (34.78%), Postives = 103/207 (49.76%), Query Frame = 3 
Query:  543 PLEGTMHAYERHIIICSGHEDWPKVVEAEESSLAESLFNLCLGAGLILTKKVALAAKQAGAPNNKQVKISACSEPSRGREGTTDVIVYPEGLIYSLSRDDASSLEQFVNVQLIEGRVASQLEPISVSYKKMVLVCTHMSRDKRCGRAGPQVVGEMTKALEAKGVGPDEIAVRGSSHFGGHKYAGVLIIYPQGDWFGLVSKKNASAIV 1163
            PL GT+  Y RH+++C+G   WP  +E  E  L           G +     AL    A  P     K++A  E S G     D++V+PE + Y     D ++    +   +I G V S   P +      V VC H +RD+RCGR GP V+  + +A  A+G+   +  VR +SH GGHKYAG ++IYP G W+G V   +A  IV
Sbjct:    9 PLSGTVKPYGRHVLVCTGARSWPARIEEAEGLL-----------GRMARDVRALRETSATPP-----KLTASDESSMGPGA--DLLVFPESVRYH--GVDEATWPGVLADHVIGGEV-STAAPSTPLTGVHVFVCVHAARDERCGRCGPPVIAALREACAAEGMA--DATVRATSHVGGHKYAGNVLIYPSGAWYGYVRPADARRIV 192
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig915.15.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT94_ECTSI1.080e-16468.77Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A2P6NW20_9EUKA5.900e-3537.13Altered inheritance of mitochondria protein 32 n=1... [more]
L8H8Q7_ACACA2.110e-3436.84Ferredoxin, putative n=1 Tax=Acanthamoeba castella... [more]
UPI0001FE36D41.610e-3247.86hypothetical protein n=1 Tax=Capsaspora owczarzaki... [more]
A0A0M8KAU1_9CHLR5.660e-2835.56Uncharacterized protein n=2 Tax=Ardenticatenia Tax... [more]
A0A2E0UXF4_9CHLR1.930e-2531.56Uncharacterized protein n=1 Tax=Anaerolineaceae ba... [more]
A0A1Y1I1V5_KLENI2.410e-2435.19Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
W9SPZ8_9ROSA1.550e-2332.91Uncharacterized protein n=1 Tax=Morus notabilis Ta... [more]
A0A835YVK0_9STRA4.620e-2338.01Sucrase/ferredoxin-like-domain-containing protein ... [more]
A0A7W1C6G9_9BACT1.040e-2234.78Sucrase ferredoxin n=1 Tax=Gemmatimonadetes bacter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig915contigP-littoralis_Contig915:33871..38676 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FT94
PFAMsSuc_Fer-like
Model size2462
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorymitochondrion
Exons5
Evalue3.72e-170
EggNOG OGs2CJ2D@1|root,2S6XF@2759|Eukaryota
Ec32 ortholog descriptionSucraseferredoxin-like
Ec32 orthologEc-06_003630.1
DescriptionSucrase/ferredoxin-like
Cds size1338
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig915.15.1prot_P-littoralis_Contig915.15.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig915 34933..38614 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791825.073239-UTR-P-littoralis_Contig915:33870..349321680791825.073239-UTR-P-littoralis_Contig915:33870..34932Pylaiella littoralis U1_48UTRP-littoralis_Contig915 33871..34932 -
1680791825.1517963-UTR-P-littoralis_Contig915:38614..386761680791825.1517963-UTR-P-littoralis_Contig915:38614..38676Pylaiella littoralis U1_48UTRP-littoralis_Contig915 38615..38676 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791825.0871334-CDS-P-littoralis_Contig915:34932..352091680791825.0871334-CDS-P-littoralis_Contig915:34932..35209Pylaiella littoralis U1_48CDSP-littoralis_Contig915 34933..35209 -
1680791825.0987225-CDS-P-littoralis_Contig915:35585..357161680791825.0987225-CDS-P-littoralis_Contig915:35585..35716Pylaiella littoralis U1_48CDSP-littoralis_Contig915 35586..35716 -
1680791825.1162367-CDS-P-littoralis_Contig915:36304..364841680791825.1162367-CDS-P-littoralis_Contig915:36304..36484Pylaiella littoralis U1_48CDSP-littoralis_Contig915 36305..36484 -
1680791825.1292198-CDS-P-littoralis_Contig915:37540..377601680791825.1292198-CDS-P-littoralis_Contig915:37540..37760Pylaiella littoralis U1_48CDSP-littoralis_Contig915 37541..37760 -
1680791825.1418614-CDS-P-littoralis_Contig915:38084..386141680791825.1418614-CDS-P-littoralis_Contig915:38084..38614Pylaiella littoralis U1_48CDSP-littoralis_Contig915 38085..38614 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig915.15.1

>prot_P-littoralis_Contig915.15.1 ID=prot_P-littoralis_Contig915.15.1|Name=mRNA_P-littoralis_Contig915.15.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=446bp
MFQQRRLLQNVIRLTPSGRTTTSNTERSAPSIIPASELPNRKSHLHVQMS
YRRNALTGASIVALGTGAFLCARAYSKSCSRNTSGTSTSGRGTASFASPK
ALSAARSNTETPAAAAAAATAATAASEKNNGVGPDRAAETSPPAQKQPCG
GCDCGLMEPGPLEGTMHAYERHIIICSGHEDWPKVVEAEESSLAESLFNL
CLGAGLILTKKVALAAKQAGAPNNKQVKISACSEPSRGREGTTDVIVYPE
GLIYSLSRDDASSLEQFVNVQLIEGRVASQLEPISVSYKKMVLVCTHMSR
DKRCGRAGPQVVGEMTKALEAKGVGPDEIAVRGSSHFGGHKYAGVLIIYP
QGDWFGLVSKKNASAIVDKCVLGTEGMKANWRGNMASPGTKAQPAKKPKP
TAAETTADASPSPVPTTTLKHEPEEQSGSAPVNGRRPRRESIDGA*
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mRNA from alignment at P-littoralis_Contig915:33871..38676-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig915.15.1 ID=mRNA_P-littoralis_Contig915.15.1|Name=mRNA_P-littoralis_Contig915.15.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4806bp|location=Sequence derived from alignment at P-littoralis_Contig915:33871..38676- (Pylaiella littoralis U1_48)
ACCTCCCGCGCGTCTCGCAGCCACAGCACGGCAGTGTCTCGTGTGCCCCT
CTGTCTGGCTGAATGTTCCAGCAGCGGCGACTGCTCCAGAACGTCATACG
GCTCACACCATCCGGTCGAACGACCACCAGCAATACCGAGAGAAGCGCAC
CATCTATCATACCAGCATCAGAGCTTCCGAACCGAAAGTCCCACTTGCAC
GTTCAAATGAGTTATCGGCGAAACGCTCTCACCGGTGCTAGCATCGTCGC
TCTAGGGACCGGCGCTTTCCTGTGCGCGCGTGCATACAGCAAGAGCTGTA
GCAGAAACACCAGCGGCACAAGCACCAGCGGCAGAGGCACCGCCAGTTTC
GCGTCGCCCAAAGCGTTGTCGGCAGCCCGCTCCAACACCGAAACTCCAGC
AGCAGCAGCAGCAGCAGCAACAGCAGCAACAGCAGCTTCGGAGAAGAACA
ATGGTGTGGGCCCAGACAGAGCGGCGGAGACATCTCCTCCTGCTCAAAAG
CAGCCGTGCGGTGGGTGTGACTGCGGGTTGATGGAACCGGGACCGCTCGA
AGGCACGATGCACGCCTACGAGCGGCACATCATCATCTGCAGGTGAGCTT
CGCTGTGGGGCTTTTCTCCTCAATCACGCATGGCCGTCGCCCGCAGCACA
TACCTTACAGCAGCGCATGCAGCATTTTCTTTTCTTGAAAGAAGCAAAGC
AGGATATCCGTTCGTAAAATTTTCCTGAAAACCATGAAAACGAAGTAATT
TGGTGGATGTCAGCTCACCAAAAAGCATGTCTGATCGCTTGCAGAGGCCT
ACCAACACCAACGACTACTCACTTCACACAACTAGGACAAAAGAGGATGT
GAACGCGTCAGTCCTTACCTTCCTAGTATTCCGTGTCAATGACTTTGCTG
GTGCTTGACGAATCAGTGGACACGAGGACTGGCCGAAGGTCGTGGAGGCG
GAAGAGTCGTCGTTGGCCGAGTCTCTGTTCAACCTGTGCCTGGGCGCCGG
CCTGATCCTCACGAAGAAGGTCGCCCTGGCGGCCAAGCAGGCGGGCGCGC
CGAACAACAAGCAGGTCAAGATATCCGCTTGCTCCGAACCGTCACGCGGC
CGCGAGGGAACGACGGACGTCATCGTCTACCCCGAGGTGTGTGTGTGTGT
GTGTGTGCGTGTGTGTACGTGTGCGTGCGTGTGTCTCTTGGCGATCGTGA
ATTGTGTGAAGCGCTGTCGTCCATTTTGTCCTGTTTTTAATCTGATGGCG
GGCGCAGGGGGGGCGGGGGGGGTAATCGGTCGTCATCATCAGGCAATTGA
ATCTGCTGATGGTGTCGTCTGTCCTGTTGGTTGCTTCTGTTTCTAAGTGT
GCTTCAAGCGTTGTGGGCGACCAAGTATGTGCGCCGGAGGGCGGGTTTTA
TCTTTTTTGTCGACGCTTACCAGCATAGTGCATGCGTACACGCGCCAGCC
TTGCTGAGGCGTATGGTAAAGGCACCTTGTTGAAATTCACCGCAACCCAA
CCTTCATATGTTTGGAGCATTGTGGACAGAACTTCATATTTCGCGCGTTC
CGCTGTGACGTTGCGACTGCTGGCGGGCGAACCTCGCGCTGGTGTCGGCC
TTTTCTCGGACCTGTCCAATATGAAGTGCGGTGTTGGTGCTGGATTGTCT
GTCCTGCCGTAAGTTGCCCTCGCCGTGTCTTCTTCTCGGCCGTTGTCGTC
GTATTCACAGGGCATCTCTCGGACGTTTCCTCGTTTGCTGCCGAACTTCA
CACCACGACAATCAGGAGCGTTTACAGCATGCGTTCTTTGACACCAAATC
TCTTGAATTTGTATCCTGGTCCACGCTTCGTGTTCCGCAGCCCCGACAGC
ATTTGTCGGAAAGGCACCCGCGCCTGCGCGTGGGTTGTCGTACGCGCGCG
CTTGTTTCGAGACGAGTTTATCCTGCCTTCTCCCTTCCCACACTCTCTCG
TCTTTTTCACAAGAGGAGTGCGAAGAGCAGCGCGAAGACGACTCTGTAGA
CAACTCAGGGGCGGGCGGCAGCAGTGGAACCCCGCCCCCCCTATTGCGCT
ATTTGTAAAAAACGCGGGAATGTCTTTCGACGACTTGCGCCATGCAACAG
ACGATCACCCCCCCCCCTCCCCTCCCGCTCTCCCCCCCCTTTCGCTGCTC
ACGTCCTCTTGCACCGCTTCACCCACCCCCACTCTACTGCAGGGACTGAT
CTACTCCCTGTCCCGAGACGACGCCAGCTCCTTGGAGCAGTTCGTCAACG
TTCAGCTCATCGAGGGCCGGGTTGCATCGCAGCTGGAGCCCATCTCCGTG
TCGTACAAGAAGATGGTGCTCGTGTGCACCCACATGTCGCGGGACAAGCG
GTGCGGCCGCGCCGGACCCCAGGTGTGTGTGTGTGTATGTCTGCATGTCT
ATCTGTCTGTCGTGTCTTGTCTGTCTTCCTGTCTGCCTGTCTGTCTTGTC
TGTGTTTTCTATCCGTCTGTCTATTTGCCTATCTGTCTTATCTGTCTGTA
TTTCTGTCCGTCTGTCTGTTTGTCTGTCTGTCTGCATTTCTGCTTGCCTG
CCTGCCTGTTTGTCTGTCTGTATTTCTGCTTGCCTGCCTGCCTGCGCGCG
CGCGCCTGCGTGCGTTTGGATGCTGCTTCGAAGTATTCGTTTTTGCGAGC
GAGAACTTTATTATACAACCGTGTCAAATCTGCTTCAAGCACTCCCTTTA
TTTCTAGGGACGCTTGAAGCACGTGTAAGCTTGCTGTGGATTGATGACCC
TAAAATAGGAGGCCGCTTGCGACTGCTGACCCACCACCTGCAAGACTTGC
GAGTTCGTTCCTCGCAACGCTGATACCTCGAAAAATTCCGTCTCGCCCTC
CTGGAAGTTTTCGGCTTAGCGCCCCCTCCCCTATCGTATCCTCGTCGAAG
TTATTTATTCCCCGTCTCCGCTTCCTCGCCCGGAATGCCCCCAAAACGCC
TGCCCATCAGGTGGTTGGGGAAATGACAAAAGCGCTTGAAGCCAAGGGTG
TTGGCCCTGACGAGATCGCCGTGCGAGGGAGTTCCCATTTCGGAGGGCAC
AAGTATGCCGGGGTCCTCATTATCTACCCCCAGGGAGACTGGTGAGCATC
AACAGCAGGAGTCAATCCGTGCCGCCCGTGCCCGACCGCAAACCAAAATC
AAGCCCATCGTTTTTGTTGAGTGTTTTTTCAGTCCATTTTACTTCCATGG
CTTGTGTGAGTGGGGTGGTGTGGTGTGTGCTGTATCCCTTGTAGGCTGTG
TTTGGTGTGTCATGCCACACGCTTCCTTTTATCGCGTCAAATCCAGGCGA
AGATTTCCCGGCGTGTTTGTATTCCCATAGCTCAATCATGTAGCAGGTAG
CACCATGGTCCGTATCCCAAGCGCACTCCCCGAGGGGTGGTGCACTGCTG
TTTTTTTTGTATGTGTGTGTTTTGTATTATTCCTTCAACAAACGTCATTT
TTCTCTCCTCACCCCAGGTTCGGGTTGGTCTCCAAGAAGAATGCCTCGGC
GATCGTGGACAAGTGCGTTCTAGGCACCGAGGGGATGAAGGCCAACTGGA
GGGGAAACATGGCCAGCCCGGGGACTAAGGCACAACCAGCGAAGAAGCCG
AAGCCGACGGCCGCCGAAACTACGGCAGATGCCTCCCCGTCCCCCGTCCC
CACCACTACGCTCAAGCACGAGCCGGAGGAGCAGTCAGGATCGGCGCCCG
TTAACGGCCGTAGACCTCGGCGCGAAAGCATCGACGGGGCCTGAAAATAA
TAATGCCTCGTTTCTCATTTCGTGAGAGGAAAGTTTTTCTTTGGAGAGGG
GGAGGGAGCCGACAAAAAACGAAAAGGCGAGGAGATGTTGGTTGACTCGG
TCCCGGCTGTATTTTGTGAACACACGCGGTTGGTTTTGTCGACGTACTGT
GCTATTGAACGGTTTGGTACTGTTGTACAATTACAGCTGTGTGGGATAAA
GGTGCTCTTCATGTGTGAAGGGATGATAAAGAGAGCGCCAAGCGAGATTT
CCCCCCCCCCTCGAGACAATAGATTAGTGGGTCGTGAGGCAATTCGGGCG
TTCGGTGTTGCTGTGCGTTATGCACGCGCGTAGTCCTGGTTGGTGGTGTT
GATGTTTTGTGTGGGTATAGGTCACACAAGTGATGACGGAAGGATTTAGG
GTGTTTCTTTTCGGAGGCAGTTGTGTTGGTAAAGCGTGCCAAGGTTTCTT
TAAATACCGAGACCTTCGCTTGTTCAATTAGTGTGCTGACTGAGTTTGAT
TGATGTTTTTTGCCTCGTAAGGGTAAACTGAACCGCGTGTGTTCGTGAAA
TGAAATGCGGCGTGTTAGTAATTGTTTCACGTTTTTTTGTGTCGATCTTA
CAAGGCTTGTTTGCTATAATGCTTTACCTTGACCTCCACGAGGAAAGCCT
CAAGATGTTTCCCAATCGGCATTGTTCAAGGTGCCTTGCTTGTTCAGTTT
TGATCCTCCGGTGACAAGCGGAGGAATTTTTAATTTTGAAATAGTTTGTT
TTCTTTTTTTTGGGGCCGGTCCATTCGAACTCGTAACGATGAAAATCTCA
TCCTGAACCCGCCACGGGAAGGAGATGTTTTTCACGAGAACTGGTGAGGG
AGAGAGAAAAGGTGCCCGCAGTTTTCTGATTGGTCATTTTCTTTCAAAGG
AAATTCTGATCGGTTGAAAATCCCTTGTCGACCGGTGACGTCATCCAGGG
CGGCGTCACCGTGTTGTAGAAAATTTCAAGAATGAAAGAAAAAAGGCGTA
AAATTAGGCCAGCGTATATGCCCCTAACCGGTCAGTGGCTCGCACACAGC
AGCAGC
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Coding sequence (CDS) from alignment at P-littoralis_Contig915:33871..38676-

>mRNA_P-littoralis_Contig915.15.1 ID=mRNA_P-littoralis_Contig915.15.1|Name=mRNA_P-littoralis_Contig915.15.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1338bp|location=Sequence derived from alignment at P-littoralis_Contig915:33871..38676- (Pylaiella littoralis U1_48)
ATGTTCCAGCAGCGGCGACTGCTCCAGAACGTCATACGGCTCACACCATC
CGGTCGAACGACCACCAGCAATACCGAGAGAAGCGCACCATCTATCATAC
CAGCATCAGAGCTTCCGAACCGAAAGTCCCACTTGCACGTTCAAATGAGT
TATCGGCGAAACGCTCTCACCGGTGCTAGCATCGTCGCTCTAGGGACCGG
CGCTTTCCTGTGCGCGCGTGCATACAGCAAGAGCTGTAGCAGAAACACCA
GCGGCACAAGCACCAGCGGCAGAGGCACCGCCAGTTTCGCGTCGCCCAAA
GCGTTGTCGGCAGCCCGCTCCAACACCGAAACTCCAGCAGCAGCAGCAGC
AGCAGCAACAGCAGCAACAGCAGCTTCGGAGAAGAACAATGGTGTGGGCC
CAGACAGAGCGGCGGAGACATCTCCTCCTGCTCAAAAGCAGCCGTGCGGT
GGGTGTGACTGCGGGTTGATGGAACCGGGACCGCTCGAAGGCACGATGCA
CGCCTACGAGCGGCACATCATCATCTGCAGTGGACACGAGGACTGGCCGA
AGGTCGTGGAGGCGGAAGAGTCGTCGTTGGCCGAGTCTCTGTTCAACCTG
TGCCTGGGCGCCGGCCTGATCCTCACGAAGAAGGTCGCCCTGGCGGCCAA
GCAGGCGGGCGCGCCGAACAACAAGCAGGTCAAGATATCCGCTTGCTCCG
AACCGTCACGCGGCCGCGAGGGAACGACGGACGTCATCGTCTACCCCGAG
GGACTGATCTACTCCCTGTCCCGAGACGACGCCAGCTCCTTGGAGCAGTT
CGTCAACGTTCAGCTCATCGAGGGCCGGGTTGCATCGCAGCTGGAGCCCA
TCTCCGTGTCGTACAAGAAGATGGTGCTCGTGTGCACCCACATGTCGCGG
GACAAGCGGTGCGGCCGCGCCGGACCCCAGGTGGTTGGGGAAATGACAAA
AGCGCTTGAAGCCAAGGGTGTTGGCCCTGACGAGATCGCCGTGCGAGGGA
GTTCCCATTTCGGAGGGCACAAGTATGCCGGGGTCCTCATTATCTACCCC
CAGGGAGACTGGTTCGGGTTGGTCTCCAAGAAGAATGCCTCGGCGATCGT
GGACAAGTGCGTTCTAGGCACCGAGGGGATGAAGGCCAACTGGAGGGGAA
ACATGGCCAGCCCGGGGACTAAGGCACAACCAGCGAAGAAGCCGAAGCCG
ACGGCCGCCGAAACTACGGCAGATGCCTCCCCGTCCCCCGTCCCCACCAC
TACGCTCAAGCACGAGCCGGAGGAGCAGTCAGGATCGGCGCCCGTTAACG
GCCGTAGACCTCGGCGCGAAAGCATCGACGGGGCCTGA
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