prot_P-littoralis_Contig912.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig912.1.1
Unique Nameprot_P-littoralis_Contig912.1.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length62
Homology
BLAST of mRNA_P-littoralis_Contig912.1.1 vs. uniprot
Match: D7FHP4_ECTSI (AP-1 complex subunit gamma n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHP4_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 8.130e-26
Identity = 56/58 (96.55%), Postives = 57/58 (98.28%), Query Frame = 0
Query:    1 MSIKLRELIRAVRACKTAAEERGVVAQECARIRTAFKEEDIEFRNRNVAKLLFIHMLG 58
            MSI+LRELIRAVRACKTAAEERGVVAQECARIRTAFKEED EFRNRNVAKLLFIHMLG
Sbjct:    1 MSIRLRELIRAVRACKTAAEERGVVAQECARIRTAFKEEDTEFRNRNVAKLLFIHMLG 58          
BLAST of mRNA_P-littoralis_Contig912.1.1 vs. uniprot
Match: A0A482RW17_9ARCH (Adaptin_N domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RW17_9ARCH)

HSP 1 Score: 93.2 bits (230), Expect = 7.290e-22
Identity = 48/58 (82.76%), Postives = 53/58 (91.38%), Query Frame = 0
Query:    1 MSIKLRELIRAVRACKTAAEERGVVAQECARIRTAFKEEDIEFRNRNVAKLLFIHMLG 58
            MSIKLR+LIRAVRACKTAAEER V+++ECA IRTA KEED +FR RNVAKLLFIHMLG
Sbjct:    1 MSIKLRDLIRAVRACKTAAEERAVISKECALIRTAIKEEDEQFRQRNVAKLLFIHMLG 58          
BLAST of mRNA_P-littoralis_Contig912.1.1 vs. uniprot
Match: A0A812MR36_SYMPI (Ap1g1 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812MR36_SYMPI)

HSP 1 Score: 94.7 bits (234), Expect = 2.910e-21
Identity = 47/58 (81.03%), Postives = 55/58 (94.83%), Query Frame = 0
Query:    1 MSIKLRELIRAVRACKTAAEERGVVAQECARIRTAFKEEDIEFRNRNVAKLLFIHMLG 58
            MSIKLRELIR++RACKTAAEER V+A+ECA IRTAFKE+D +FR+RNVAKLLFIHM+G
Sbjct:    1 MSIKLRELIRSIRACKTAAEERAVIARECALIRTAFKEDDNQFRHRNVAKLLFIHMMG 58          
BLAST of mRNA_P-littoralis_Contig912.1.1 vs. uniprot
Match: A0A813L6Y0_POLGL (AP-1 complex subunit gamma n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813L6Y0_POLGL)

HSP 1 Score: 94.7 bits (234), Expect = 3.210e-21
Identity = 47/58 (81.03%), Postives = 55/58 (94.83%), Query Frame = 0
Query:    1 MSIKLRELIRAVRACKTAAEERGVVAQECARIRTAFKEEDIEFRNRNVAKLLFIHMLG 58
            MSIKLRELIR++RACKTAAEER V+A+ECA IRTAFKE+D +FR+RNVAKLLFIHM+G
Sbjct:    1 MSIKLRELIRSIRACKTAAEERAVIARECALIRTAFKEDDNQFRHRNVAKLLFIHMMG 58          
BLAST of mRNA_P-littoralis_Contig912.1.1 vs. uniprot
Match: A0A1Q9EJ89_SYMMI (AP-1 complex subunit gamma-1 n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9EJ89_SYMMI)

HSP 1 Score: 94.7 bits (234), Expect = 3.240e-21
Identity = 47/58 (81.03%), Postives = 55/58 (94.83%), Query Frame = 0
Query:    1 MSIKLRELIRAVRACKTAAEERGVVAQECARIRTAFKEEDIEFRNRNVAKLLFIHMLG 58
            MSIKLRELIR++RACKTAAEER V+A+ECA IRTAFKE+D +FR+RNVAKLLFIHM+G
Sbjct: 2401 MSIKLRELIRSIRACKTAAEERAVIARECALIRTAFKEDDNQFRHRNVAKLLFIHMMG 2458          
BLAST of mRNA_P-littoralis_Contig912.1.1 vs. uniprot
Match: A0A0G4ELK5_VITBC (AP-1 complex subunit gamma n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ELK5_VITBC)

HSP 1 Score: 94.4 bits (233), Expect = 4.380e-21
Identity = 48/58 (82.76%), Postives = 53/58 (91.38%), Query Frame = 0
Query:    1 MSIKLRELIRAVRACKTAAEERGVVAQECARIRTAFKEEDIEFRNRNVAKLLFIHMLG 58
            MSIKLRELIR +RACKTAAEER V+A+ECA IRTAFKEED  +R+RNVAKLLFIHMLG
Sbjct:    1 MSIKLRELIRNIRACKTAAEERAVIAKECAEIRTAFKEEDNHYRHRNVAKLLFIHMLG 58          
BLAST of mRNA_P-littoralis_Contig912.1.1 vs. uniprot
Match: A0A7S1F0P5_NOCSC (AP-1 complex subunit gamma n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1F0P5_NOCSC)

HSP 1 Score: 93.6 bits (231), Expect = 8.170e-21
Identity = 46/58 (79.31%), Postives = 55/58 (94.83%), Query Frame = 0
Query:    1 MSIKLRELIRAVRACKTAAEERGVVAQECARIRTAFKEEDIEFRNRNVAKLLFIHMLG 58
            MSIKLRELIR++R+CKTAAEER V+A+ECA IRTAFKE+D +FR+RNVAKLLFIHM+G
Sbjct:   20 MSIKLRELIRSIRSCKTAAEERSVIARECALIRTAFKEDDNQFRHRNVAKLLFIHMMG 77          
BLAST of mRNA_P-littoralis_Contig912.1.1 vs. uniprot
Match: A0A0G4HF14_9ALVE (Adaptin_N domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HF14_9ALVE)

HSP 1 Score: 88.2 bits (217), Expect = 1.620e-20
Identity = 44/58 (75.86%), Postives = 51/58 (87.93%), Query Frame = 0
Query:    1 MSIKLRELIRAVRACKTAAEERGVVAQECARIRTAFKEEDIEFRNRNVAKLLFIHMLG 58
            MS KLR+L+RAVR CKTAAEERGV+A+ECA IRT FK+E   +R+RNVAKLLFIHMLG
Sbjct:    1 MSQKLRDLVRAVRGCKTAAEERGVIAKECAMIRTTFKDESDSYRHRNVAKLLFIHMLG 58          
BLAST of mRNA_P-littoralis_Contig912.1.1 vs. uniprot
Match: A0A662XRJ5_9STRA (Adaptin_N domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XRJ5_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 2.800e-20
Identity = 44/58 (75.86%), Postives = 53/58 (91.38%), Query Frame = 0
Query:    1 MSIKLRELIRAVRACKTAAEERGVVAQECARIRTAFKEEDIEFRNRNVAKLLFIHMLG 58
            MS KLR+LIR+VRACKTAAEER V+A+E A IRTAFK++D ++R+RNVAKLLFIHMLG
Sbjct:    1 MSQKLRDLIRSVRACKTAAEERAVIAKESALIRTAFKDQDKQYRHRNVAKLLFIHMLG 58          
BLAST of mRNA_P-littoralis_Contig912.1.1 vs. uniprot
Match: A0A836CEJ3_9STRA (AP-1 complex subunit gamma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEJ3_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 2.840e-20
Identity = 48/58 (82.76%), Postives = 53/58 (91.38%), Query Frame = 0
Query:    1 MSIKLRELIRAVRACKTAAEERGVVAQECARIRTAFKEEDIEFRNRNVAKLLFIHMLG 58
            MSIKL+ELIRAVRACKTAA ER VV+QE A IRTAFKEE +E+RNRNVAKLLF+HMLG
Sbjct:    1 MSIKLKELIRAVRACKTAAAERSVVSQELALIRTAFKEEQLEYRNRNVAKLLFMHMLG 58          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig912.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHP4_ECTSI8.130e-2696.55AP-1 complex subunit gamma n=2 Tax=Ectocarpus TaxI... [more]
A0A482RW17_9ARCH7.290e-2282.76Adaptin_N domain-containing protein (Fragment) n=1... [more]
A0A812MR36_SYMPI2.910e-2181.03Ap1g1 protein n=1 Tax=Symbiodinium pilosum TaxID=2... [more]
A0A813L6Y0_POLGL3.210e-2181.03AP-1 complex subunit gamma n=2 Tax=Polarella glaci... [more]
A0A1Q9EJ89_SYMMI3.240e-2181.03AP-1 complex subunit gamma-1 n=2 Tax=Symbiodinium ... [more]
A0A0G4ELK5_VITBC4.380e-2182.76AP-1 complex subunit gamma n=2 Tax=Vitrella brassi... [more]
A0A7S1F0P5_NOCSC8.170e-2179.31AP-1 complex subunit gamma n=1 Tax=Noctiluca scint... [more]
A0A0G4HF14_9ALVE1.620e-2075.86Adaptin_N domain-containing protein n=1 Tax=Chrome... [more]
A0A662XRJ5_9STRA2.800e-2075.86Adaptin_N domain-containing protein n=1 Tax=Nothop... [more]
A0A836CEJ3_9STRA2.840e-2082.76AP-1 complex subunit gamma n=1 Tax=Tribonema minus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..61
e-value: 8.4E-17
score: 62.9
NoneNo IPR availablePANTHERPTHR22780:SF5AP-1 COMPLEX SUBUNIT GAMMAcoord: 1..59
NoneNo IPR availablePANTHERPTHR22780ADAPTIN, ALPHA/GAMMA/EPSILONcoord: 1..59
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 5..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig912contigP-littoralis_Contig912:2667..2852 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig912.1.1mRNA_P-littoralis_Contig912.1.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig912 2667..2861 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig912.1.1 ID=prot_P-littoralis_Contig912.1.1|Name=mRNA_P-littoralis_Contig912.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=62bp
MSIKLRELIRAVRACKTAAEERGVVAQECARIRTAFKEEDIEFRNRNVAK
LLFIHMLGEAI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold