prot_P-littoralis_Contig911.11.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig911.11.1
Unique Nameprot_P-littoralis_Contig911.11.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length285
Homology
BLAST of mRNA_P-littoralis_Contig911.11.1 vs. uniprot
Match: A0A6H5JJP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJP9_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 1.110e-14
Identity = 52/151 (34.44%), Postives = 76/151 (50.33%), Query Frame = 0
Query:   25 WLHDRVLQRVQQDWCDVTWFALLADSLGINIAVWEPAGVNRDLQIYQAIDNMKGLFLYDKKDRMDEEGPQWLHLLFHTMDKPFAAWAGVKPGEGPMMTHNHFSWMSLSGEAGERFKRAIGSGQQQAGG----PEAL--RGASSGLSTAIGG 169
            W  D   Q  ++ W DVTW + LA   G+NI VWEP+  +  +Q Y   +N  G+FL++K+D+MDEEG  W+HLL+     P+ A              NHF  + L  +A   F   + S + Q G     P A+   G  +G S+ +GG
Sbjct:   87 WFCDLAWQSAEK-WVDVTWMSFLASEYGVNIMVWEPSAKHGTVQAYLG-NNTAGMFLFEKEDKMDEEGDHWVHLLYREHANPWLA-------RNQNHNLNHFDRLQLGHDAAASFVDVVASAKLQLGTVTLMPSAIYTAGGEAGGSSLVGG 228          
BLAST of mRNA_P-littoralis_Contig911.11.1 vs. uniprot
Match: A0A6H5JW40_9PHAE (HTH La-type RNA-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW40_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 1.130e-14
Identity = 51/151 (33.77%), Postives = 76/151 (50.33%), Query Frame = 0
Query:   25 WLHDRVLQRVQQDWCDVTWFALLADSLGINIAVWEPAGVNRDLQIYQAIDNMKGLFLYDKKDRMDEEGPQWLHLLFHTMDKPFAAWAGVKPGEGPMMTHNHFSWMSLSGEAGERFKRAIGSGQQQAGG----PEAL--RGASSGLSTAIGG 169
            W  D   Q  ++ W D+TW + LA   G+NI VWEP+  +  +Q Y   +N  G+FL++K+D+MDEEG  W+HLL+     P+ A              NHF  + L  +A   F   + S + Q G     P A+   G  +G S+ +GG
Sbjct:  176 WFCDLARQSAEK-WVDITWMSFLASEYGVNIMVWEPSAKHGTVQAYSG-NNTAGMFLFEKEDKMDEEGDHWVHLLYREHANPWLA-------RNQNHNLNHFDRLQLGHDAVASFVEVVASAKLQLGTVTLMPSAIYTAGGEAGGSSMVGG 317          
BLAST of mRNA_P-littoralis_Contig911.11.1 vs. uniprot
Match: A0A6H5KFV5_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFV5_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 5.800e-14
Identity = 43/121 (35.54%), Postives = 62/121 (51.24%), Query Frame = 0
Query:   25 WLHDRVLQRVQQDWCDVTWFALLADSLGINIAVWEPAGVNRDLQIYQAIDNMKGLFLYDKKDRMDEEGPQWLHLLFHTMDKPFAAWAGVKPGEGPMMTHNHFSWMSLSGEAGERFKRAIGS 145
            WL D      ++ W DVTW + LA   G+NI VWEP+  +  +Q Y   +N  G+FL++K+D+MDEEG  W+HLL+     P+ A              NHF  + L  +A   F   + S
Sbjct:  315 WLCDLAWHSAEK-WIDVTWMSFLASEYGVNIMVWEPSAKHGTVQAYSG-NNTAGMFLFEKEDKMDEEGDHWVHLLYREHANPWLA-------RNQNHNLNHFDRLQLGHDAVASFVEVVAS 426          
BLAST of mRNA_P-littoralis_Contig911.11.1 vs. uniprot
Match: A0A6H5K2B4_9PHAE (DDE_Tnp_1_7 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2B4_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 8.260e-9
Identity = 42/130 (32.31%), Postives = 60/130 (46.15%), Query Frame = 0
Query:   25 WLHDRVLQRVQQDWCDVTWFALLADSLGINIA---VWEPAGVNRDLQIYQAIDNMKGLFLYDKKDRMDEEGPQWLHLLFHTMDKPFAAWAGVKPGEGPMMTHNHFSWMSLSGEAGERFKRAIGSGQQQAG 151
            W  D   Q V+  W D+TW + LA   G+NI     W        +Q Y   +N  G+FL++K+D+MDEEG  W+HLL+     P+ A              NHF  + L  +A   F   + S + Q G
Sbjct:   10 WFCDLAWQSVK--WVDITWMSFLASEYGVNITGCPSWSR------IQTYSG-NNTAGMFLFEKEDKMDEEGDHWVHLLYREHANPWLA-------RNQNHNLNHFDRLQLGHDAVASFVEVVASAKLQLG 123          
BLAST of mRNA_P-littoralis_Contig911.11.1 vs. uniprot
Match: A0A6H5KNV0_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNV0_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 8.580e-9
Identity = 43/131 (32.82%), Postives = 66/131 (50.38%), Query Frame = 0
Query:   45 ALLADSLGINIAVWEPAGVNRDLQIYQAIDNMKGLFLYDKKDRMDEEGPQWLHLLFHTMDKPFAAWAGVKPGEGPMMTHNHFSWMSLSGEAGERFKRAIGSGQQQAGG----PEAL--RGASSGLSTAIGG 169
            +LLA   G+NI +WEP+  +  +Q Y   +N  G+ L++K+D+MDEEG  W+HLL+     P+ A              NHF  + L  +A   F   + S + Q G     P A+   G  +G S+ +GG
Sbjct:    2 SLLASEYGVNIILWEPSAKHGTVQAYSE-NNTAGMLLFEKEDKMDEEGDHWVHLLYREHANPWLA-------RNQNHNLNHFDRLQLGHDAVASFVEVVASAKLQLGTVTLMPSAIYTAGGEAGGSSMVGG 124          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig911.11.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JJP9_9PHAE1.110e-1434.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JW40_9PHAE1.130e-1433.77HTH La-type RNA-binding domain-containing protein ... [more]
A0A6H5KFV5_9PHAE5.800e-1435.54Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K2B4_9PHAE8.260e-932.31DDE_Tnp_1_7 domain-containing protein (Fragment) n... [more]
A0A6H5KNV0_9PHAE8.580e-932.82DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 175..192
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..259

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig911contigP-littoralis_Contig911:60646..61500 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig911.11.1mRNA_P-littoralis_Contig911.11.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig911 60646..62070 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig911.11.1 ID=prot_P-littoralis_Contig911.11.1|Name=mRNA_P-littoralis_Contig911.11.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=285bp
MRLIERVDGHGNYMDEPQSSDKRTWLHDRVLQRVQQDWCDVTWFALLADS
LGINIAVWEPAGVNRDLQIYQAIDNMKGLFLYDKKDRMDEEGPQWLHLLF
HTMDKPFAAWAGVKPGEGPMMTHNHFSWMSLSGEAGERFKRAIGSGQQQA
GGPEALRGASSGLSTAIGGRGIKRKNTQPEQSSKTNDGGTSKKPVLVMSP
RTAEAKDKGKRAVGSGGRGKPVPGKSLVSKKQGGVQDKGKKQAAGGGSTG
GGGGRKSKDLPLLVCYDSDGNTGIHEDFSGRGSFA
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