mRNA_P-littoralis_Contig121.68.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig121.68.3 vs. uniprot
Match: D8LEJ3_ECTSI (Methyltranfer_dom domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEJ3_ECTSI) HSP 1 Score: 492 bits (1266), Expect = 1.490e-150 Identity = 436/881 (49.49%), Postives = 500/881 (56.75%), Query Frame = 3
Query: 399 PLTVAIVAATLGSANISRQRLKKLADSPAVTSQLESALSGGGMQASRAQAKLRKLLEAVEQVV-GEKGDGDGCASAAAIAAKVVTGCPELLLLEGRKLLGAAKQLREMEGITERTATQLAINFPAFFTLPPAARERIGFFVGQVGLTPKEVGRLAKRHPDLINDIGGGHVRRLVDLFLDDLEVGKAAFLRMVRRQPGLLSVNLSGNVLKVTEFFEKEMGLGRDQISKIYCSHPQASVLCLDLEKNIRPVIEWLGAPDPGDTQQXXXXXXXXXXXLPPSLGKSTLTPKTGVDEIQSLPRNPTAATTRDHKVAASGGLSIAVGPDSERDRHWDGVDAATNQGVLDRLDSHDANGRAFQGRGGAVRGAKMDARPPAPALATPEYGKKDGWDWGLGLEPQGRNKVVSKQGDLLWKSVPGNLAVSTAWFVVEVGLSWDEMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMQAMRAAGAPPAFPHLRALCTYPDGRFAIWFERIVAAAXXXXXXXXXXXXXXXXXXXXXXXLPGRNSALTTIXXXXXXXXXTRPPRGRRLRG-VGDATRPSVCTTSLAELGISYTVSGRSSXXXXXXXXXXXXXXXXXXXXXXXXAAAEEIEACFSPGRADAKLLVRKLSKGLDVLDLCCGTGGFALNAAAGKARSVLGVDKAARAVRTATKNAVANGLGGTATFVKANVAAFAEAQAASRRRE--------------GEVNGTWWDMVVVDPPSFSTKSARSTSRAVNAFTRMAESVSLVVRPSGGMVVVVYEPGDGVFKTPEEMTAVFTSAAARAGLSFSLSLMEAAS 2993
P TVAI+ +LG ++ ++ L+ LA SP SQLE LSG G +ASRAQAKLR LLEAVE VV G + DG ASAA +VV GCP LLLL+G++LL QLR+MEG+TE TA QLA+ +P +FTLPPAAR RIGFFVG+VGLT K+VGRLAKR PD+I +IGGGHVRRLVDL L+DL VGKAA LRMVR IRPV++WLGAPDP + Q XXXXXXXXXXX A+ + G D + R D + AAT G D A + +GA + + P LA P Y + G + R K+V KQGDLLWKSV GNLA S +WFV EVGLSW XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AMRAAGAPPAF HLRALC YP+ RF+ W ERIV A P S+ + +RP GRRL G D S+ TTSLAELG++Y + ++ XXXXXXXXXXXXXXXXXXXX F+PGRA+ K LVRKL++GLDVLDL CGTGGFALNAAAG ARSV+GVDKAARAVRTATKNA ANGL ATF+KA+VAAFA A G WD+VVVDPPSF KSARST+RAV AFTR+AESV+LVVRPSGGM+VVVYEPGDGVF TPEEMTAVFTSAA+ AG+S SLSL+EA S
Sbjct: 72 PFTVAILLESLG--DVPQRTLRHLAGSPPA-SQLELTLSGSGARASRAQAKLRGLLEAVESVVVGAQEKDDGLASAAT---RVVAGCPALLLLDGKELLNRGTQLRDMEGVTEETAAQLAVEYPGYFTLPPAARARIGFFVGKVGLTAKDVGRLAKRRPDVIENIGGGHVRRLVDLLLEDLHVGKAALLRMVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--IRPVVDWLGAPDP-EAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASVRQTTNPSGLDRKSGR--DRIAAATTAGFPDDAGELTLRRAAREEVAAVGQGAGPEPQRAEPTLAVPVYTEGVGXXXXXXFGREERRKIVCKQGDLLWKSVVGNLAKSASWFVEEVGLSWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------------------------------AMRAAGAPPAFRHLRALCNYPEDRFSAWLERIVLDADDSSS-------------------PATASSAVS---------PSRPRPGRRLGGDADDPPTSSLSTTSLAELGLTYAAATMNAPRRQXXXXXXXXXXXXXXXXXXXX---------FAPGRAEVKALVRKLARGLDVLDLMCGTGGFALNAAAGGARSVIGVDKAARAVRTATKNARANGLDDAATFLKADVAAFAGASXXXXXXXXXXXXXXXXXXXXXGPGERKAWDLVVVDPPSFLAKSARSTARAVKAFTRLAESVALVVRPSGGMLVVVYEPGDGVFDTPEEMTAVFTSAASAAGVSLSLSLLEARS 845
BLAST of mRNA_P-littoralis_Contig121.68.3 vs. uniprot
Match: A0A3M7KSP6_AUXPR (Methyltrans_SAM domain-containing protein (Fragment) n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A3M7KSP6_AUXPR) HSP 1 Score: 87.0 bits (214), Expect = 7.520e-14 Identity = 58/138 (42.03%), Postives = 78/138 (56.52%), Query Frame = 3
Query: 2448 FSPGRADAKLLVRKLSKGLDVLDLCCGTGGFALNAAAGKARSVLGVDKAARAVRTATKNAVANGLGGTATFVKANVAAFAEAQAASRRREGEVNGTWWDMVVVDPPSFSTKSARSTSRAVNAFTRMAESVSLVVRPSG 2861
F + D++L++R+LSKG VLDLCC TGGFALNAAAG A VLG+D + RAV A NA NGL TF + ++ A+ R + G WDMVV+DPP + ++ RA +T + +V P G
Sbjct: 286 FYADQRDSRLVLRQLSKGKRVLDLCCYTGGFALNAAAGGATHVLGLDSSHRAVHAAAANAALNGLDQVLTFERQDMKAW------GRGSQPPPGG--WDMVVLDPPKLAP-GKKAMVRATRQYTAYNAAAMRLVAPGG 414
BLAST of mRNA_P-littoralis_Contig121.68.3 vs. uniprot
Match: A0A2P6VPY9_9CHLO (Ribosomal RNA large subunit methyltransferase I n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VPY9_9CHLO) HSP 1 Score: 83.2 bits (204), Expect = 3.430e-12 Identity = 54/138 (39.13%), Postives = 79/138 (57.25%), Query Frame = 3
Query: 2448 FSPGRADAKLLVRKLSKGLDVLDLCCGTGGFALNAAAGKARSVLGVDKAARAVRTATKNAVANGLGGTATFVKANVAAFAEAQAASRRREGEVNGTWWDMVVVDPPSFSTKSARSTSRAVNAFTRMAESVSLVVRPSG 2861
F + D++ ++R L+ G VLD+CC +GGFALNAAAG A + +GVD +A AV A +NA NGL A FVKA+ AF + A R++ WD+VV DPP + S ++ +A + ++ +V P G
Sbjct: 315 FYADQRDSRAVLRGLAAGKTVLDMCCYSGGFALNAAAGGATAAMGVDSSATAVALAARNAELNGL--QAEFVKADSTAFMKQALAERKQ--------WDIVVFDPPKLAP-SRKTLDKATRKYRKLNAMAMQLVEPGG 441
BLAST of mRNA_P-littoralis_Contig121.68.3 vs. uniprot
Match: A0A7S0SED3_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SED3_9CHLO) HSP 1 Score: 77.4 bits (189), Expect = 1.860e-11 Identity = 62/171 (36.26%), Postives = 93/171 (54.39%), Query Frame = 3
Query: 2448 FSPGRADAKLLVRKLSKGLD-VLDLCCGTGGFALNAAAGKARSVLGVDKAARAVRTATKNAVANGLGGTATFVKANVAAFAEAQAASRRREGEVNGTWWDMVVVDPPSFSTKSARSTSRAVNAFTRMAESVSLVVRPSGGMVVVVYEPGDGVFKTPEEMTAVFTSAAARAG 2957
F + D + +VR L+ G + V+D+CC TGGFALNAA G A+ V+GVD + A+ AT+NA NG+ + +FV N AF A + GT+ DM+++DPP + +A + RAV + M + ++RP G +V G +T V ++AAA AG
Sbjct: 99 FYVDQRDNRAMVRALAAGKNRVMDVCCYTGGFALNAALGGAKKVIGVDSSQPALDIATQNAALNGVSKSCSFV--NAEAFRHLDACIEAGQA---GTY-DMIILDPPKLAPNAA-AVPRAVPKYVGMNQRAMKLLRPGGLLVTCSCS---GAITQRGLLTEVVSAAAASAG 259
BLAST of mRNA_P-littoralis_Contig121.68.3 vs. uniprot
Match: A0A2K3CSS2_CHLRE (PUA domain-containing protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3CSS2_CHLRE) HSP 1 Score: 79.3 bits (194), Expect = 3.560e-11 Identity = 62/169 (36.69%), Postives = 90/169 (53.25%), Query Frame = 3
Query: 2499 GLDVLDLCCGTGGFALNAAAGKARSVLGVDKAARAVRTATKNAVANGLGGTATFVKANVAAFAEAQAASRRREGEVNGTWWDMVVVDPPSFSTKSARSTSRAVNAFTRMAESVSLVVRPSGGMVVVVYEPGDGVFKTPEEMTAVFTSAAARAGLSFSLSLMEAASSSCY 3005
G VLDLCC +GGFAL+AAA A V+GVD + AV+ A NA NGLGG A+FV+A+V+ + RE G +D+VV+DPP + S +RA +TR+ +V+P G ++ G E T + AA + G + +L EA ++ C+
Sbjct: 510 GPTVLDLCCYSGGFALSAAAAGASRVVGVDSSEAAVQLAAANAELNGLGGVASFVRADVSDY--------MREAVQQGHQYDVVVLDPPKLAPD-RNSLARARIKYTRLNSLAMRLVKPGGLLITCSCS---GAMTQSGEFTEMVIEAARQVGRQ-ATALREAGAAPCH 665
BLAST of mRNA_P-littoralis_Contig121.68.3 vs. uniprot
Match: A0A2R6XIF6_MARPO (PUA domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XIF6_MARPO) HSP 1 Score: 77.4 bits (189), Expect = 8.620e-11 Identity = 50/139 (35.97%), Postives = 74/139 (53.24%), Query Frame = 3
Query: 2448 FSPGRADAKLLVRKLSKGLDVLDLCCGTGGFALNAAAGKARSVLGVDKAARAVRTATKNAVANGLGGT-ATFVKANVAAFAEAQAASRRREGEVNGTWWDMVVVDPPSFSTKSARSTSRAVNAFTRMAESVSLVVRPSG 2861
F + +++ +R L +G VLDLCC +GGFALNAAAG A V GVD + A+ A NA NG+ +TF++ ++ F A R WD+V++DPP + + SRA+ + R+ V+ PSG
Sbjct: 286 FYADQRESRFFLRSLCEGKTVLDLCCYSGGFALNAAAGGASHVTGVDSSGPAIELARANAALNGIDPCRSTFIRQDIKNFLSHSVAEGRS--------WDVVILDPPKLAPN-RKVLSRAITQYRRLNALAMKVINPSG 415
BLAST of mRNA_P-littoralis_Contig121.68.3 vs. uniprot
Match: A0A6U0E2A8_9CHLO (Hypothetical protein n=2 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A6U0E2A8_9CHLO) HSP 1 Score: 77.4 bits (189), Expect = 9.620e-11 Identity = 54/141 (38.30%), Postives = 84/141 (59.57%), Query Frame = 3
Query: 2448 FSPGRADAKLLVRKLSKGLDVLDLCCGTGGFALNAAAGKARSVLGVDKAARAVRTATKNAVANGLGGTATFVKANVAAFAEAQAASRRREGEVNGTWWDMVVVDPPSFSTKSARSTSRAVNAFTRMAESVSLVVRPSGGMV 2870
F + + ++ +R LS+G VLD+CC TGGFALNAA G A SV+ VD + A+R A +NA N + FV+A+ AF Q A R E +GT+ D+VV+DPP F+ +S ++A+ + + + ++RP G ++
Sbjct: 314 FYVDQRENRMAIRDLSRGKKVLDVCCYTGGFALNAAVGGATSVVAVDSSDAALRVAARNAELNNVQDKINFVRAD--AFDFMQEAIDRGE---SGTY-DVVVLDPPKFAPNK-QSLTKALPKYVGLNKRAMALLRPGGVLI 447
BLAST of mRNA_P-littoralis_Contig121.68.3 vs. uniprot
Match: A0A7C2DQB7_9FIRM (Class I SAM-dependent rRNA methyltransferase n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C2DQB7_9FIRM) HSP 1 Score: 75.9 bits (185), Expect = 1.620e-10 Identity = 53/135 (39.26%), Postives = 77/135 (57.04%), Query Frame = 3
Query: 2466 DAKLLVRKLSKGLDVLDLCCGTGGFALNAAAGKARSVLGVDKAARAVRTATKNAVANGLGGTATFVKANVAAFAEAQAASRRREGEVNGTWWDMVVVDPPSFSTKSARSTSRAVNAFTRMAESVSLVVRPSGGMV 2870
D +L L K +DVLD+ C TGGFA+ A G ARSV+ VD + A+ A +NA NG+ G TF++AN AF E RRR G G +D +++DPP F+ +S + RA A+ + ++RP G ++
Sbjct: 205 DNRLAAAALVKDMDVLDVFCYTGGFAIQAVLGGARSVIAVDSSGGALSLARRNAELNGVDGRCTFLEAN--AFDEL----RRRAGA--GERFDAIILDPPPFA-RSKEAAERAAAAYKEINLRALKLLRPGGVLI 330
BLAST of mRNA_P-littoralis_Contig121.68.3 vs. uniprot
Match: A0A7S2FEA7_9CHLO (Hypothetical protein n=3 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A7S2FEA7_9CHLO) HSP 1 Score: 75.5 bits (184), Expect = 4.170e-10 Identity = 51/122 (41.80%), Postives = 73/122 (59.84%), Query Frame = 3
Query: 2508 VLDLCCGTGGFALNAAAGKARSVLGVDKAARAVRTATKNAVANGLGGTATFVKANVAAFAEAQAASRRREGEVNGTWWDMVVVDPPSFSTKSARSTSRAVNAFTRMAESVSLVVRPSGGMVV 2873
VLDLCC TGGF+L+AAAG A+SVLGVD + AV A++NA NG F + A A RE + NG +D+VV+DPP + SA++ ++A + + + V++P GGM+V
Sbjct: 361 VLDLCCYTGGFSLSAAAGGAKSVLGVDSSEHAVALASENARRNGFSEQCLFQSGDAIAVA--------RELKANGEMYDVVVLDPPKLAP-SAKAVAKAKRKYAQFNAAAIDVLKP-GGMLV 472
BLAST of mRNA_P-littoralis_Contig121.68.3 vs. uniprot
Match: A0A5J4XSA4_9CHLO (PUA domain-containing protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XSA4_9CHLO) HSP 1 Score: 75.5 bits (184), Expect = 4.640e-10 Identity = 52/139 (37.41%), Postives = 76/139 (54.68%), Query Frame = 3
Query: 2448 FSPGRADAKLLVRKLSKGLDVLDLCCGTGGFALNAAAGKARSVLGVDKAARAVRTATKNAVANGLGGTA-TFVKANVAAFAEAQAASRRREGEVNGTWWDMVVVDPPSFSTKSARSTSRAVNAFTRMAESVSLVVRPSG 2861
F + D++L +R L++G VLDLCC TGGFALNA AG A V GVD + A+ A NA NG + F+K +V + + Q V G WD+VV+DPP + +S +RA+ + ++ V++P G
Sbjct: 385 FYADQRDSRLAIRHLAQGKAVLDLCCYTGGFALNALAGGAHHVTGVDSSVPALALAESNAQLNGWPQSQYCFLKDDVVKYMQQQI--------VEGRQWDLVVLDPPKLAPN-RKSLNRALAKYRKLNILAMRVLKPGG 514 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig121.68.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig121.68.3 >prot_P-littoralis_Contig121.68.3 ID=prot_P-littoralis_Contig121.68.3|Name=mRNA_P-littoralis_Contig121.68.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1153bp MWLTLAWASPPFSSSTLCLPCDNPANTTLGHACHDKKAYAHVRPACSCRTback to top mRNA from alignment at P-littoralis_Contig121:286249..296005- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig121.68.3 ID=mRNA_P-littoralis_Contig121.68.3|Name=mRNA_P-littoralis_Contig121.68.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=9757bp|location=Sequence derived from alignment at P-littoralis_Contig121:286249..296005- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig121:286249..296005- >mRNA_P-littoralis_Contig121.68.3 ID=mRNA_P-littoralis_Contig121.68.3|Name=mRNA_P-littoralis_Contig121.68.3|organism=Pylaiella littoralis U1_48|type=CDS|length=3459bp|location=Sequence derived from alignment at P-littoralis_Contig121:286249..296005- (Pylaiella littoralis U1_48)back to top |