mRNA_P-littoralis_Contig121.57.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig121.57.3
Unique NamemRNA_P-littoralis_Contig121.57.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig121.57.3 vs. uniprot
Match: A0A6H5K0Z4_9PHAE (Phosducin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0Z4_9PHAE)

HSP 1 Score: 493 bits (1269), Expect = 7.090e-169
Identity = 267/289 (92.39%), Postives = 276/289 (95.50%), Query Frame = 3
Query:   42 MADLEDKILKKNIPGKYTWWDKDSDEEGEGARADWVDREASDPETEMTDLEKQKKWVDNDCPEPIRRTIMARQEKERARTGVKGVLADFDAWKLSADAEDLIAKEYRAAMLKRMTEGHTVPG--SAXXXXXXXXXXXXXXXXXXXXGADEGFLGSYRRRRLEQLKATAGRPQFGQIAEAERATFVSAVDTEDPRTSVVVHLYEPYIDACRRLNRFLEVLAAKQPTVKFLRLRSSAAEGGDYDPVALPTLLLYRAGEVVGCLTRVTDDIGDNFTQEDVEWLLQEHDVFEA 902
            M DLEDKILKKNIPGKYTWW+KDSDEEGE ARADWVDREASDPE EMT++EKQKKWVDNDCPEPIRRTIMARQEKERARTGVKGVLADFDAWKLSADAEDLIAKEYRAAMLKRM EGHTVPG  +A   XXXXXXXXXXXXXXXXX   EGFLGSYRRRRLEQLKATAGRPQFGQI EAER+TFVSAVDTEDPRTSVVVHLYEPYIDACRR+NRFLEVLAAKQPTVKFLRLRSSAAEGGDYDPVALPTLLLYRAGEVVGC+TRVTDDIG+NFTQ+DVEWLLQEHDVFEA
Sbjct:    1 MGDLEDKILKKNIPGKYTWWEKDSDEEGETARADWVDREASDPEREMTEMEKQKKWVDNDCPEPIRRTIMARQEKERARTGVKGVLADFDAWKLSADAEDLIAKEYRAAMLKRMAEGHTVPGPLAATTIXXXXXXXXXXXXXXXXXXXXEGFLGSYRRRRLEQLKATAGRPQFGQIVEAERSTFVSAVDTEDPRTSVVVHLYEPYIDACRRMNRFLEVLAAKQPTVKFLRLRSSAAEGGDYDPVALPTLLLYRAGEVVGCMTRVTDDIGENFTQDDVEWLLQEHDVFEA 289          
BLAST of mRNA_P-littoralis_Contig121.57.3 vs. uniprot
Match: A0A835YKQ5_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKQ5_9STRA)

HSP 1 Score: 332 bits (850), Expect = 8.160e-106
Identity = 171/291 (58.76%), Postives = 211/291 (72.51%), Query Frame = 3
Query:   42 MADLEDKILKKNIPGKYTWWDKDSDEEGEGARADWVDREASDPETEMTDLEKQKKWVDNDCPEPIRRTIMARQEKERARTGVKGVLADFDAWKLSADAEDLIAKEYRAAMLKRMTEGHTVPGSAXXXXXXXXXXXXXXXXXXXXGADEGFLGSYRRRRLEQLKATAGRPQFGQIAEAERATFVSAVDTEDPRTSVVVHLYEPYIDACRRLNRFLEVLAAKQPTVKFLRLRSSAAEGGD---YDPVALPTLLLYRAGEVVGCLTRVTDDIGDNFTQEDVEWLLQEHDVFEAI 905
            M+ LED+ILK+NIPGKY+WW+KD+DE G  ARA+W D +ASDPE E+T+LEKQKKWV+ DCP+P+RRTIMAR EKERARTGVKGVLAD  A++ S  A+  + ++YRAA L+RM  GH V  SA                      ++ FL  YR++RL +L+A+A RP FGQI EA R  FV  VD  DPR  VVVHLYEPYI AC+ +NR LEVLA + P+VKFLR+ S    GGD   YDPVALPTL++YRA E+V C TRVTDD+GD FT+ DVEWLLQE ++FEA+
Sbjct:    1 MSTLEDQILKQNIPGKYSWWEKDTDEAGPKARAEWFDPDASDPEQELTELEKQKKWVEADCPDPVRRTIMARAEKERARTGVKGVLADHAAYQASEMADHQLQQQYRAAALQRMAGGHVVANSAPHFVPKTDPDAEDGDDDEDGDLND-FLSEYRKQRLLELQASAHRPIFGQIQEASRGDFVEQVDNVDPRCYVVVHLYEPYIKACQAMNRHLEVLAREYPSVKFLRMLSGDVSGGDEEGYDPVALPTLMVYRAKEIVACFTRVTDDLGDTFTKSDVEWLLQEINIFEAV 290          
BLAST of mRNA_P-littoralis_Contig121.57.3 vs. uniprot
Match: A0A7R9UGG9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGG9_9STRA)

HSP 1 Score: 220 bits (560), Expect = 1.740e-62
Identity = 126/297 (42.42%), Postives = 168/297 (56.57%), Query Frame = 3
Query:   51 LEDKILKKNIPGKYTWWDKDSDEEGEGARADWVDREASDPETE-MTDLEKQKKWVDNDCPEPIRRTIMARQEKERARTGVKGVLADFDAWKLSADAEDLIAKEYRAAMLKRMTEG--HTVPGSAXXXXXXXXXXXXXXXXXXXXGADEGFLGSYRRRRLEQLKATAGRPQFGQIAEAERATFVSAVDTEDPRTSVVVHLYEPYIDACRRLNRFLEVLAAKQPTVKFLRLRSSAAE---GGDYDPVALPTLLLYRAGEVVGCLTRVTDDIGDNFTQEDVEWLLQEHDVFEAIQEPGAA 923
            LEDK+LKKNIPGKY+WWD + D  G          E  DP+ E   DL+ Q+     D PEP+RR  M+++ +E+  TGVKGVL DF+ W+   DA++      R A L+R   G      G A                     +D+ FL  YRR+R+ QL A A  P FG++AE     FV  VD  DPR  VVVHLYEP++  C ++NR LE+LA +QP+VKFLR+R+       G ++D +ALPTLL+YR G+ V  + RV D++G+     DVEWLL    VF+A Q   AA
Sbjct:    3 LEDKMLKKNIPGKYSWWDDEDDHRGXXXXG-----EVQDPDEEGKDDLDVQRAL--QDAPEPVRRACMSQRVREKDNTGVKGVLRDFEEWRDEEDAKETSDAMRRNAALQRAARGAIRAADGGAHANVENADID-----------SDDEFLERYRRQRMSQLMAAAAAPTFGEVAEVSGDDFVETVDAVDPRAFVVVHLYEPFVHLCTKMNRVLEILARRQPSVKFLRMRADECRRTTGQEFDAIALPTLLVYRGGQTVATIVRVQDEVGEGLQANDVEWLLGLEGVFQASQNDSAA 281          
BLAST of mRNA_P-littoralis_Contig121.57.3 vs. uniprot
Match: A0A7S2B798_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B798_9STRA)

HSP 1 Score: 178 bits (452), Expect = 1.250e-46
Identity = 110/307 (35.83%), Postives = 160/307 (52.12%), Query Frame = 3
Query:   51 LEDKILKKNIPGKYTWWDKDSDEE--GEGARADWVD---------------REASDPETEMTDLEKQKKWVDNDCPEPIRRTIMARQEKERARTGVKGVLADFDAWKLSADAEDLIAKEYRAAMLKRMTEGHTVPGSAXXXXXXXXXXXXXXXXXXXXGAD----EGFLGSYRRRRLEQLKATAGRPQFGQIAEAERATFVSAVDTEDPRTSVVVHLYEPYIDACRRLNRFLEVLAAKQPTVKFLRLRSSAAEGGDYDPVALPTLLLYRAGEVVGCLTRVTDDIGDNFTQEDVEWLLQEHDVFEAIQ 908
            LEDK+L+ NIPG+YT WDKD DEE  G+  RA+W+D                E+   E ++ DL+++   +    PE + +T  A Q    A+TG KGVL D+   K        + K +R A+L RM  G T   +                      AD    E FL  +R  R+ +L++ + +P FG I E     +  A+D  DPR  VVVH+YE Y+  C R+NR  E LA     VKF+RL+S+ +    +DPV LPT+ +Y+AG++     RV D +G NF+ +D+EW+L +  VFE+ Q
Sbjct:   14 LEDKMLRTNIPGRYTQWDKDDDEEEGGKNYRAEWIDPGEGADEAGAAGQPMNESQRMERDVADLQRK---IAAGMPETVAKTSYAHQMG--AKTGPKGVLNDYKEHKRIEAHNKQVDKLHREAVLNRMAYGATASNTLSLAQERIDAQVAQQEREAEEEADAAEEEDFLSKFREARIRELQSASTQPVFGNIVEVAAHEYCEAIDKCDPRVFVVVHIYEDYVKECGRMNRCFEELARSYTNVKFVRLKSTESPS-PFDPVTLPTICVYKAGDLCNSFVRVQDTVGTNFSSDDIEWMLNQEGVFESKQ 314          
BLAST of mRNA_P-littoralis_Contig121.57.3 vs. uniprot
Match: A0A7S2RCN5_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RCN5_9STRA)

HSP 1 Score: 162 bits (410), Expect = 6.270e-41
Identity = 126/293 (43.00%), Postives = 170/293 (58.02%), Query Frame = 3
Query:   51 LEDKILKKNIPGKYTWWDKDSDEEGEGARA------DWVDREASDP----ETEMTDLEKQKKWVDNDCPEPIRRTIMARQEKERARTGVKGVLADFDAWKLSADAEDLIAKEYRAAMLKRMTEGHTVPGSAXXXXXXXXXXXXXXXXXXXXGADEGFLGSYRRRRLEQLKATAGRPQFGQIAEAERAT-FVSAVDTEDPRTSVVVHLYEPYIDACRRLNRFLEVLAAKQPTVKFLRLRSSAAEGGDYDPVALPTLLLYRAGEVVGCLTRVTDDIGDNFTQEDVEWLLQEHDVF 896
            LEDKILK+NIPG+Y+ WD  +DE G   RA      D V+RE  D       EM D+ K +++ ++  PE + +   AR    R  TG KGVL D+   ++    E L A   R A+L+R+  G     S     XXXXXXXXXXXXXXXX A++  L   R +R  +L+A A  P FG++ E      F+ A+D ED R  VVVH+Y+  + ACR +NR  E LA     VKFLRL+++AA    +D   +P L +YR+G++  C  RVTD +G+ FT +DVE LL EH VF
Sbjct:   29 LEDKILKRNIPGRYSTWD--ADEAGTERRAAAREEEDTVEREEEDAGDGATQEMRDVGKMQEYAEHGVPETLSKNEYARAHGHR--TGPKGVLTDYREHQVHEHVERLAADAEREAVLRRIAYG----ASREDAEXXXXXXXXXXXXXXXXXAEQDILRRLREQRRRELQAAASMPVFGEVREVTADDHFLEAIDKEDSRVFVVVHIYDEAVPACRSMNRCFERLARSHSHVKFLRLQAAAAPT-TFDADVMPVLSIYRSGDMHACCVRVTDQVGERFTTDDVENLLSEHGVF 312          
BLAST of mRNA_P-littoralis_Contig121.57.3 vs. uniprot
Match: A0A7S3GW90_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GW90_9STRA)

HSP 1 Score: 149 bits (376), Expect = 1.070e-36
Identity = 105/295 (35.59%), Postives = 155/295 (52.54%), Query Frame = 3
Query:   42 MADLEDKILKKNIPGKYTWWD---KDSDEEGEGARADWVDREASDP-ETEMTDLEKQKKWVDNDCPEPIRRTIMARQEKERARTGVKGVLADFDAWKLSADAEDLIAKEYRAAMLKRMTEGHTVPGSAXXXXXXXXXXXXXXXXXXXXGAD--EGFLGSYRRRRLEQLKA----------TAGRPQFGQIAEAERATFVSAVDTEDPRTSVVVHLYEPYIDACRRLNRFLEVLAAKQPTVKFLRLRSSAAEGGDYDPVALPTLLLYRAGEVVGCLTRVTDDIGDNFTQEDVEWLL 878
            M DLE+ I ++N+PGKY+ WD   ++   +    + D V  E   P +++M  L+  ++  + + PE IR++I+A + +  A TGVKGVLAD+ A +  A+AE      +R  +L RMT+G  V   A                  XX     + F+  +R +RL++L+           T     FG + E     FV  V+ E     VVVHLYEP +  C RLN  L+ +AA QPT+KFLR+++S+ E    D VALP L +YR GE +  L  +  D G  FT+ D+EWLL
Sbjct:    1 MGDLEETIFQRNVPGKYSKWDDVDRNEFHDEPTEKYDQVPAETERPKDSDMELLQYAQQLSNAEVPETIRQSILAERARMTA-TGVKGVLADYRAAQAMAEAEAQAIALHRQQVLTRMTQGAKVQYVAEEEEDETAGLDINDIDSDXXXXXXXDAFMREFRAKRLQELRGASSSSAGANYTEQTSMFGSVKEVRAEDFVQEVEGEKRNVVVVVHLYEPSVQTCIRLNVLLDEIAASQPTIKFLRMQASSNEIV-VDRVALPILTVYRGGETIETLAGIAADFGQYFTKADIEWLL 293          
BLAST of mRNA_P-littoralis_Contig121.57.3 vs. uniprot
Match: F0XWS7_AURAN (Phosducin domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWS7_AURAN)

HSP 1 Score: 124 bits (311), Expect = 2.650e-27
Identity = 106/299 (35.45%), Postives = 139/299 (46.49%), Query Frame = 3
Query:   51 LEDKILKKNIPGKYTWWDKDSDEEGEGARADWV---DREASDPETEMTDLEKQKKWVDNDCPEPIRRTIMARQEKERARTGVKGVLADFDAWKLSADAEDLIAKEYRAAMLKRMTEGHTVPGSAXXXXXXXXXXXXXXXXXXXXGADEG---------------FLGSYRRRRLEQLKATAGRPQFGQI-AEAERATFVSAVDTEDPRTSVVVHLYEPYIDACRRLNRFLEVLAAKQPTVKFLRLRSSAAEGGD----YDPVALPTLLLYRAGEVVGCLTRVTDDIGDNFTQEDVEWLL 878
            LEDK L+KNIPG+Y  WDKDSDEEG G RAD +   + E S+ +  + DL         D PEP+R          R   G KG+LA    +K    AE +   E R   L  +  G      A  XXX                A                  FL  YR+ R+  L++  G P FG       +  ++ A+D  D RT VVVHLYEP    CRR+N+ L+VLA ++  + F+ +R S  E GD    +D    P L++YRAG VV    +V  DIG  F   D+E LL
Sbjct:   32 LEDKFLRKNIPGRYEHWDKDSDEEG-GGRADSLGGSEDEESEDDDPIPDLP-----GPMDDPEPLR---YGEAPDARKMPGNKGILAQHRYFKKMQYAERVELAEERERKLLDVARGRLRDPDAPPXXXVQLTERQREAMAELREAXXXXXXXXXXXXXXXXXEFLEEYRKMRIAALRSVQGMPTFGAFKVNCSKEEYLQALDV-DARTLVVVHLYEPTFPKCRRVNQCLDVLAGRRREISFVGMRLS--EAGDACAGWDSEVFPVLVVYRAGSVVETFFQVGKDIGATFDYADIESLL 318          
BLAST of mRNA_P-littoralis_Contig121.57.3 vs. uniprot
Match: A0A6U3QXS5_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3QXS5_9STRA)

HSP 1 Score: 120 bits (301), Expect = 6.280e-26
Identity = 105/275 (38.18%), Postives = 150/275 (54.55%), Query Frame = 3
Query:   42 MADLEDKILKKNIPGKYTWWDKDSDEEGEGARADWVDREASDPETEMTDLEKQKKWVDNDCPEPIRRTIMA-----RQEKERARTGVKGVLADFDAWKLSADAEDLIAKEYRAAMLKRMTEGHTVP------GSAXXXXXXXXXXXXXXXXXXXXGADEGFLGSYRRRRLEQLKATAGRPQF-GQIAEAERATFVSAVDTEDPRTSVVVHLYEPYIDACRRLNRFLEVLAAKQPTVKFLRLRSSAAEGGDYDPVALPTLLLYRAGEVVGCLTRVT 830
            M+ LED+ILK+NIPGKY+WWD  +D+E                   + ++E+ K+W     P+P++ + +          +   TG KGVL D+   +        +    R  +L+R TEG T+        +AXXXXXXXXXXXXXXXXXXXX     FL +YR+ RL QL+ T   P + G++ E     + S VDT DPR   +VHLYEP I  C +LN  LE  A+ +   KF++LR+  A+  + D + LPT+++YR G +   L R T
Sbjct:    1 MSGLEDRILKQNIPGKYSWWD--NDDEARPNXXXXXXXXXXXENNSLNEVEQVKQWDAQGVPKPLQISALEGGPVPHNGGKSQNTGAKGVLNDYRQTRAIESHNRQVEALERQDLLRRATEGATLQQGDVAMSAAXXXXXXXXXXXXXXXXXXXXXXXXEFLKNYRKNRLRQLQLTTHWPSYDGKVEEVTPEEYSSLVDTIDPRVHFIVHLYEPSIRDCVKLNSMLERCASLKKYAKFVKLRALDAKP-NMDCIVLPTIMIYRGGNLEHNLVRFT 272          
BLAST of mRNA_P-littoralis_Contig121.57.3 vs. uniprot
Match: A0A7S3PR85_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PR85_9STRA)

HSP 1 Score: 115 bits (288), Expect = 2.150e-24
Identity = 91/292 (31.16%), Postives = 146/292 (50.00%), Query Frame = 3
Query:   63 ILKKNIPGKYTWWD----KDSDEEGEGARADWVDREASDPETEMTDLEKQKKWVDNDCPEPIRR-TIMARQEKERARTGVKGVLADFDAWKLSADAEDLIAKEYRAAMLK------RMTEGHTVPGSAXXXXXXXXXXXXXXXXXXXXGAD------EGFLGSYRRRRLEQLKATAGRPQFGQIAEAERATFVSAVDTEDPRTSVVVHLYEPYIDACRRLNRFLEVLAAKQPTVKFLRLRSSAAEGGDYDPVALPTLLLYRAGEVVG--CLTRVTDDIG-DNFTQEDVEWLL 878
            I+   +  KY   D    +DSDE+G G +  +V     D +   +  E+  K V  D P P R  + +  ++++   TG KGV AD++      +A+ +I ++    +LK      R   G++  G++                      +      E  +   R+ RL+Q+K  A  PQ+G++ +  +  FV  VD  DPRT VVVHL+E YI+ACRR+N  L+ LA+K P +KF++L+++ A+       ALP  ++Y  G++V    +  V  +IG D FT  DVEWLL
Sbjct:    3 IISNELERKYLTQDLLQERDSDEDG-GEKTRYV----IDSDFSWSSEEENAKPVKEDAPHPDRDWSKLLTKQRKYGNTGPKGVKADYE------EAQRIIRRQNETKVLKDREEFRRQALGNSSSGTSLSYASQKKGISGSLVKSYDADDEIEIDDGEAIILKMRKMRLQQMKELAALPQWGRVLQVSKFQFVDEVDKADPRTPVVVHLFEDYINACRRMNDILDRLASKHPFIKFIKLKATDADQ-TLSHSALPAFMVYVNGQLVNEAGVNVVNTEIGNDLFTDTDVEWLL 282          
BLAST of mRNA_P-littoralis_Contig121.57.3 vs. uniprot
Match: A0A7S3NFR8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NFR8_9STRA)

HSP 1 Score: 113 bits (282), Expect = 3.830e-24
Identity = 83/283 (29.33%), Postives = 138/283 (48.76%), Query Frame = 3
Query:   51 LEDKILKKNIPGKYTWWDKDSDEEGEGARADWVDREASDPETEMTDLEKQKKWVDNDCPEPIRRTIMARQEKERARTGVKGVLADFDAWKLSADAEDLIAKEYRAAMLKRMTEG--HTVPGSAXXXXXXXXXXXXXXXXXXXXGADEGFLGSYRRRRLEQLKATAGRPQFGQIAEA-ERATFVSAVDTEDPRTSVVVHLYEPYIDACRRLNRFLEVLAAKQPTVKFLRLRSSAAEGG--DYDPVALPTLLLYRAGEVVGCLTRVTDDI--GDNFTQEDVEWLL 878
            LED +L +N+PG+ T W++D DE+          R   D E++  +  ++ K  +   P  +   +       R R G+KG L  +  +K       L A+  R A   R+  G   T P  +                      D+ F+ ++R RR+++LK  A RP+FG + +   +A +++A+D ED R   +VHL++  + + R L   L  LA+++  + FL +    AE    ++D   LP L+LYR+GEVV  L RVTD +  G++ T  D+E L+
Sbjct:    6 LEDMLLTQNVPGRMTTWERDPDEK--------CPRNNDDSESDTDENFEEAKNPNVSSPAQLPEAMRYGDAPGRQRAGIKGQLKQYRYFKRMEYLSKLAARAERDANCLRIANGAVRTEPFVSDPNIRQISNSDDDDDEFE----DDEFMTAFRARRIDELKRNASRPRFGSMRQCVSKAQYIAAIDNEDSRVITIVHLFDTSLPSSRHLEALLVQLASRRSDICFLSMTIEEAECSQHEFDNSVLPILVLYRSGEVVDTLFRVTDSLLQGNSNTDADLENLI 276          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig121.57.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K0Z4_9PHAE7.090e-16992.39Phosducin domain-containing protein n=2 Tax=Ectoca... [more]
A0A835YKQ5_9STRA8.160e-10658.76Thioredoxin-like protein n=1 Tax=Tribonema minus T... [more]
A0A7R9UGG9_9STRA1.740e-6242.42Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2B798_9STRA1.250e-4635.83Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2RCN5_9STRA6.270e-4143.00Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7S3GW90_9STRA1.070e-3635.59Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
F0XWS7_AURAN2.650e-2735.45Phosducin domain-containing protein n=1 Tax=Aureoc... [more]
A0A6U3QXS5_9STRA6.280e-2638.18Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A7S3PR85_9STRA2.150e-2431.16Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A7S3NFR8_9STRA3.830e-2429.33Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig121contigP-littoralis_Contig121:240130..246118 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LEJ7
Preferred namePDCL
PFAMsPhosducin
Model size1956
Max annot lvl2759|Eukaryota
KEGG koko:K08327,ko:K15690
Hectar predicted targeting categoryother localisation
GOsGO:0001750,GO:0003008,GO:0003674,GO:0004857,GO:0004859,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005929,GO:0006139,GO:0006457,GO:0006725,GO:0006807,GO:0007154,GO:0007165,GO:0007186,GO:0007600,GO:0007601,GO:0007602,GO:0008150,GO:0008152,GO:0008277,GO:0008589,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009314,GO:0009416,GO:0009581,GO:0009582,GO:0009583,GO:0009605,GO:0009628,GO:0009966,GO:0009967,GO:0009987,GO:0010646,GO:0010647,GO:0016043,GO:0018130,GO:0019438,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0030234,GO:0032501,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0042995,GO:0043005,GO:0043086,GO:0043226,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044441,GO:0044444,GO:0044463,GO:0044464,GO:0044877,GO:0045880,GO:0046116,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0050789,GO:0050790,GO:0050794,GO:0050877,GO:0050896,GO:0050953,GO:0051606,GO:0051716,GO:0055086,GO:0055102,GO:0061083,GO:0061084,GO:0065003,GO:0065007,GO:0065009,GO:0071704,GO:0071840,GO:0097458,GO:0097730,GO:0097731,GO:0097733,GO:0098772,GO:0120025,GO:0120038,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659,GO:1902605,GO:1903332,GO:1903333
Exons5
Evalue1.53e-168
EggNOG OGsKOG3171@1|root,KOG3171@2759|Eukaryota
Ec32 ortholog descriptionThioredoxin-like fold
Ec32 orthologEc-21_004390.1
Descriptionheterotrimeric G-protein complex assembly
Cds size1014
COG categoryS
BRITEko00000,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig121.57.3prot_P-littoralis_Contig121.57.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig121 241031..246077 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789520.6434836-UTR-P-littoralis_Contig121:240129..2410301680789520.6434836-UTR-P-littoralis_Contig121:240129..241030Pylaiella littoralis U1_48UTRP-littoralis_Contig121 240130..241030 -
1680789520.710534-UTR-P-littoralis_Contig121:246077..2461181680789520.710534-UTR-P-littoralis_Contig121:246077..246118Pylaiella littoralis U1_48UTRP-littoralis_Contig121 246078..246118 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789520.6579516-CDS-P-littoralis_Contig121:241030..2411861680789520.6579516-CDS-P-littoralis_Contig121:241030..241186Pylaiella littoralis U1_48CDSP-littoralis_Contig121 241031..241186 -
1680789520.668688-CDS-P-littoralis_Contig121:241791..2420041680789520.668688-CDS-P-littoralis_Contig121:241791..242004Pylaiella littoralis U1_48CDSP-littoralis_Contig121 241792..242004 -
1680789520.6767042-CDS-P-littoralis_Contig121:242530..2428801680789520.6767042-CDS-P-littoralis_Contig121:242530..242880Pylaiella littoralis U1_48CDSP-littoralis_Contig121 242531..242880 -
1680789520.6847463-CDS-P-littoralis_Contig121:244364..2446561680789520.6847463-CDS-P-littoralis_Contig121:244364..244656Pylaiella littoralis U1_48CDSP-littoralis_Contig121 244365..244656 -
1680789520.6996353-CDS-P-littoralis_Contig121:246074..2460771680789520.6996353-CDS-P-littoralis_Contig121:246074..246077Pylaiella littoralis U1_48CDSP-littoralis_Contig121 246075..246077 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig121.57.3

>prot_P-littoralis_Contig121.57.3 ID=prot_P-littoralis_Contig121.57.3|Name=mRNA_P-littoralis_Contig121.57.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=338bp
MADLEDKILKKNIPGKYTWWDKDSDEEGEGARADWVDREASDPETEMTDL
EKQKKWVDNDCPEPIRRTIMARQEKERARTGVKGVLADFDAWKLSADAED
LIAKEYRAAMLKRMTEGHTVPGSAAAAATTTAAAVASDSDDDDDGADEGF
LGSYRRRRLEQLKATAGRPQFGQIAEAERATFVSAVDTEDPRTSVVVHLY
EPYIDACRRLNRFLEVLAAKQPTVKFLRLRSSAAEGGDYDPVALPTLLLY
RAGEVVGCLTRVTDDIGDNFTQEDVEWLLQEHDVFEAIQEPGAAAGGGGG
GSGAAAAGGGGVHEISTGRSRREGGLQESDDDDDDDC*
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mRNA from alignment at P-littoralis_Contig121:240130..246118-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig121.57.3 ID=mRNA_P-littoralis_Contig121.57.3|Name=mRNA_P-littoralis_Contig121.57.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=5989bp|location=Sequence derived from alignment at P-littoralis_Contig121:240130..246118- (Pylaiella littoralis U1_48)
GCTCAGAAGGGGGGGAAACAGCCCACGGAAGCAGCAGCAGAATGGTGAGT GGAGAGCAGTGTAGACTAGCAGACCTCACATGCTTTCGTAGTAGCCCCTG TGATTGGCGTTCACGCGTATTTCCGATACTTCTTCAGCGGCTTATATATC TATATATGATACGCGACTTTGGGTACTCCCGGGCAGGCTGCTCCCGCGGG TACAACAGGAGTCATTGGAGGCAGGTCTCCATGGATTATCAGAAGCATAT ATCACATATCATATCATACCACGGCGGTTTGATGAGCTTTGTCCATGTTG TTGGGAAATCATCCCACGACGCTGCTGACAGCACGTTCGCCGTAGGGTGG ATCTCAAGCCTGCTCTGGAACCAGGCCATATTGTGCCCTTTCACACGAAT ATCCCGGGTTCTAAATTAGAACCAACGGGTGTTTCCCCGAAAATACGTGA TGTACTTAGAAGCTTCGAAGTATTTTACCTCGTACCCCGTATGTGATACC GGTATCATATGATACATAAACCAGCTGACAAGTACGAAGCCAATAGAAAG CTCGAAAACGTATGATATGCCAAATGTATGTATAGTAGCACATCAGGAAT TCACAGATATATAGGGAAGGCTCCTACCGAGGGTTCTAGAAGGCTGGTTG CGTCCGTCTCTCAAAAGTCTAGGGTTGTTTTAAACATCTTTCATTAATTG TGGAAACTTTCCTCAAGTATCAGAAGGTGCTCTGGGGTTCTACAGAAGAA TGATGTCGATGAAGCAGCAGCACACACAACAGCATCTACATGGCAACATT AGTTTTTGTATGCCGCTTCTGTCGAGGAAATCGGCACGAGCACATTCGCG CTCGTGTTTCTTCTTCACGGCACCATTTTTGTCTCACGTTGTTGCTCTGC ACTGGTCGTCTTTTTGAGCAATCTTGACCTCGGCAGTCTTTGCAATTCAT ATCGCCCCTTTTCTGAAGCAGTTGGCTGGCTGTACATGGCTGCCATGGCA TTCCATGGGTATTCGCCGCATCTCTTGCTGTGGCGTGTCGAATGAATTTT CCATCCTTGGCTGGCATGCTGAGCGCAGACCTCGCCGCTTTTTTTTTTTT TTGCTCCCATCCGTCCACATTCTATCATTTCGTACGGCGGCAGCCTTTTT TGTGCACCCCTTGGGTGTTCACACATCTCCTCTTGCTGTGGACCCGGGGG AGAAAAAAAAATTATCACCGCAATCCTTATCCGAATCAAATGTCAAAATG CGTGTGATTGTCTTTGCATGAAAAAGATCCGTTCCGAATCTCTGCCCACA ATCCTTACTGAAAATTAAACGTGTCTGTGTACATATTGTCTTCGCATTGA AAAAAGAGATCCGTTTCGATTTCTGCCCAGTTTTTGTGAAAAAAAACAAA CACGATTGAGCAAGCAAGCAAGCAAGCAATCAATCAAACCTCTTTTTTTT ATTCATCAACAGGCGGATCTCGAGGACAAGATCCTGAAGAAAAACATCCC CGGTAAATACACGTGGTGGGACAAGGACAGCGACGAGGAAGGGGAAGGGG CCAGGGCGGACTGGGTGGACCGAGAGGCTAGCGACCCCGAGACAGAGATG ACGGACCTGGAGAAGCAGAAGAAGTGGGTCGACAACGACTGCCCCGAGCC CATACGGCGGACGATCATGGCGAGACAGGAGAAGGAGAGGGCGAGGACCG GAGTGAAGGGGGTGCTGGCCGATTTCGACGCGTGGAAACTGTCGGCGGAT GCCGGTAGGTGCACTTAGTGGGATGTCATAGTGGTTGTTGTTGTTGTTGT TGTTGTTGTTGTTGTCGTTGTCGTTGTCGTTGTTGTTGTTGTTGTTGTTT TTATTGGTTGGCCCTTGGTTGTTTGTCGGTCGACGTGTGCGTGTGTTGAG CATCTGTATGTTTGTTCACCTCGTACGGAACATACGCATGAAATGATGGG TGCGTATGTGTATTGATCTTTATTGTACGCAACAACCAGGTGTATGGACT ATCAAACCAGTCACCGCATACACACACAGATTAGAGTATTCGGAAGAAGA AGATGGTTTTGGAAGCGATTCCGAGTACATTATGGGGCTATCTCATGGCA GTCTTCTCTTGACACACATGTGCATGATGCTCCACAAAACCTGTACTGCA AATGCTGTCAATTCTCTCGTCATCAATAGCGGTTCTCGACAATTTTTTTA TCATCTGGCGTAGACCAAGCAGTAGATTCGGGGCCAAGTGTATTTATTGT AACCAACCTGGGCACGTTGTGTGTCACAAGAATCAAGTGGGCGACATTCT CGAGCATTTTTCAATCCAGCTTGGCAGTTTTTTTGCCAGGAGTGACTTTT TTCTCTCAGGGCCTAAGTGCTCCCTGGTGATCCTCCAGCAAGTGTCCATC CGGCTCACTCTACCGTCGTGTGGACTTCAGTCTCACAGCGAAGGCTGTCT CTTGAGCACCTTTGCAGGATCAGCATTCACTATATCCAAACAAACACGAC GACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCA CCGTAAAAACGACAGCAGGAGCGTGTACTTGAAACACGCCTGTTGGTGCA TTTATAGTGTTGTCGCAAACAAAGCAATACGTAGTGTCCGGCGTTTACAC GCCGGCCCGTACGTTGTGTGTCGCACCATGAAATGCCGGGAAGCGATATT CTCGAGAGCTATCCTACCCGATGCAGCTCAGCAGGTATTCTTTTTTGTCA GAGCAACAAAGACTTTTCAGAGCCGGATTGCTTCCTAGGCACCCGACCTT GGTGGGGGTTTCAGCCTCACAGCCAAGGCTTTCAGTCTCTAGTCCTGAGG CTATCCCTCGAACACTTTTTCTTAGGATTCCTCTACGTATCTGACTCCAA ACTAAGATGACCGCCACAACAACAGCAACGACACCGGCAGCAGCAGCAGC AGCAGCAGGCACTGATGATATACTTGTGTCCCGTCCCCCATCCCACTTGC ACCCCCCCCCCCCCCCCGAAGAAAGCTATGTGAACCAAAAGCATACATCA ACGGCACCCGAGCATTCATTCGCCAGTGGTGACATTTTTTGGGATAGAAA AACACGAACAGTGAGTGCTCCGTCTGCTTCCAAAGGGACGCGTGCGTGTA GCCAAATCGTCAAACGACTTAAACGCAGCGCAACAAACAAATTAGTGCCT TAGTTTAACCCCCCCCCCCCCTCCCTACCCTACCACAGAGGATCTCATTG CCAAGGAGTACCGAGCGGCGATGCTCAAACGCATGACGGAGGGCCACACC GTGCCAGGCTCCGCTGCCGCCGCCGCCACCACGACCGCCGCCGCCGTTGC CAGTGACAGCGACGATGACGATGACGGCGCCGACGAGGGTTTCCTAGGAA GCTATCGGCGGAGGCGGTTGGAGCAGCTAAAGGCCACGGCAGGGCGGCCG CAGTTCGGGCAGATTGCGGAGGCGGAGCGCGCGACGTTCGTGTCCGCGGT GGACACGGAGGATCCCCGGACGAGCGTGGTGGTGCACTTGTACGAGCCGT ACATCGACGCTTGCCGCCGCTTGAACAGATTCTTGGAGGTACGTACGAAC GCATACATATCTGCATTCGCTCTTGAAGAAGCGTACCAGACACGGTCACT TTTTTGTGACGACCTGCTTGTTGTGTGTGGGGGGTTTGCATGTTTGTTTT TTTGCCGTGGACACGCATTGTCCACGGCTGCCCCCCACTGGCCTGTCGCT GACCCTCACCTTCGACCGTACATGTGGTATATTCTCGTGTATTCATGTGG ACGCACCCGCTGAACGTACTCTCGAAGTACTTACCACAAATCTTCCCCCG GTAGTACCCTCCCAACCTCTAACCTAACACCTTGCGCCCCCCCCCCCCTC CCCCTTTAGGTAAAAACGCCAAGAGCGCCCCTGAATGGTGGTGGTGTCTC TGCTAGGAGTAGAAACGGTGCCCCGTCTGTCTCGAAAGGGATTCGTGGTC AGTTGGTCCATGACTTGATTGAGGTTGCCAAAAATGACGTACGTCCCTCC CCCCACCCCCCCCCTCCACGTATCCCCTCCTCTACATACCCTTGCCCCCC CCCCCCTACCATAGGTTCTTGCAGCAAAACAGCCCACGGTAAAGTTCTTA CGGCTGAGGAGTTCCGCGGCGGAGGGCGGCGACTACGACCCGGTGGCCTT GCCGACGCTGCTGCTGTACAGGGCCGGGGAGGTGGTGGGGTGCTTGACGC GAGTCACGGACGACATCGGGGACAACTTCACGCAGGAAGACGTGGAGTGG CTGCTGCAGGAGCACGACGTTTTCGAGGTGAAGATACGGTATGACACCCC ACGTCGCCACCAGATTCGGCCGAATTTTTTTTTTTTTTTTCTGGTCGGAG TATGAGTGCCGATCGAACCGAAGAAACGCGATCGGATTTTTTTTGTGAAA GTCGGACGGACCACACACTCCGCCACCGAAATCTCGTCATAGATATGATA CGATGGGTATAAAGCCCACACCCAACTCCTGTGTGTGCCCCACCGTGTGA TGGCTCAGAACACAGAAGAAGGGTATGACGTGACATGGTACGCCCCAAAA GGTTTGGTTTGGTCGCGATTGGCATGGTGCTCGGCAGGGGGCCGAGCTCA CGTTCGTACCGCTGTGTCACGTGCTTCATGTTTCACAAGTAAAGTTGCAC ATGGCCGTTTGCAGGTCGCGCTCCGCTGATCGATATCGATATCGGCACAT TTCTGAACGACATGAAAAAGTCCGCGACGTGTCGTAGCTTGCTGTATGTA AGACGGCCTCGATAATTGACAACAATGTTTGACGTGAGGTTTGTATTGAT CACTTACTTTTTTGTGCATTCGTGCTGTGAGTGAGGTGCGCTCACTTTGT CTGTTTCTGTTCCTCTCTCCCGTGCTCCGCAGGCGATCCAGGAGCCAGGG GCCGCGGCAGGGGGAGGGGGAGGGGGGAGCGGCGCCGCTGCTGCTGGTGG AGGAGGGGTCCACGAGATATCCACGGGCCGAAGCCGAAGAGAAGGGGGGC TACAAGAGAGCGACGATGACGACGATGACGATTGCTGATGATTTCGCCTG ACCTTGACTCTTGTGTGCCTCATTTGTGGGTGGCAGCGAGGAAAGGGTCC GTTCTCATACGATATGTACTCCTGAAGTACACGCTCTGTTGTGTCTGTGG TGGTAATTGTATTAGGGGCAGGCTCCCTTCCCGTACCTTGGTTACGGCAG TGAAAGCGCGTACACGACGCACTCTTCGAGGACTCTGGTTTTGTGTAGTG GTTTTGGTGTATTAAACGGAGTAATGTTTGTAGATGCGGCGTATTTACGG CGACGATGGTGACACGTTGAAAAACGACTCCTAGATTGTGGGCGTGGTGG TGTCCTGAATGGGGTACTACTGAGTGTAGATAGTAGATACGGTGTATACA CCGCGATGATCACAACTGCGAAACCCGATTTCGGCTGACTTCGACCCTTG GCTTAACTTTGGTGGCAGTAACAGGGTAATTTTACCGGTATGCCTACCTT CAAACCACTTTTTGTGTTGTGTGTGTGGTGGTTATTTAAACGAGGGTTTT TCGTGTGGCGCTCATCACTGCCGTACTGCTGTAGATGCCCGGCAGCGCCG TTTTTTTGTAAAAAAGAAACGAATCATATGATGAGAAAAAAATGTTGGTC GTTGAAATCGTCGAGGGCTAAACAACACCCATCATGTTATGGGTGAATTC ATGCACGTGAAACTGCTGAAGTGGGGGATTGGTGGTCTTGTCTTTTGTCT TTCTAGAAAAGACCTCCTCTTGGTTTTCTAGGAAATATATACCTCATTTT TGTTTTTTTTGCGTATTCACATCACCTCCTAAATGGATAGAAACCGTGCG CGTCAAATACTTCGTATCGACGAGGGAGCGGAGCGACCGAACCCTTTCCG CGTTGAAAATTCCGGCACGTGTCGCAGGAGCGAGGTGAA
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Coding sequence (CDS) from alignment at P-littoralis_Contig121:240130..246118-

>mRNA_P-littoralis_Contig121.57.3 ID=mRNA_P-littoralis_Contig121.57.3|Name=mRNA_P-littoralis_Contig121.57.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1014bp|location=Sequence derived from alignment at P-littoralis_Contig121:240130..246118- (Pylaiella littoralis U1_48)
ATGGCGGATCTCGAGGACAAGATCCTGAAGAAAAACATCCCCGGTAAATA
CACGTGGTGGGACAAGGACAGCGACGAGGAAGGGGAAGGGGCCAGGGCGG
ACTGGGTGGACCGAGAGGCTAGCGACCCCGAGACAGAGATGACGGACCTG
GAGAAGCAGAAGAAGTGGGTCGACAACGACTGCCCCGAGCCCATACGGCG
GACGATCATGGCGAGACAGGAGAAGGAGAGGGCGAGGACCGGAGTGAAGG
GGGTGCTGGCCGATTTCGACGCGTGGAAACTGTCGGCGGATGCCGAGGAT
CTCATTGCCAAGGAGTACCGAGCGGCGATGCTCAAACGCATGACGGAGGG
CCACACCGTGCCAGGCTCCGCTGCCGCCGCCGCCACCACGACCGCCGCCG
CCGTTGCCAGTGACAGCGACGATGACGATGACGGCGCCGACGAGGGTTTC
CTAGGAAGCTATCGGCGGAGGCGGTTGGAGCAGCTAAAGGCCACGGCAGG
GCGGCCGCAGTTCGGGCAGATTGCGGAGGCGGAGCGCGCGACGTTCGTGT
CCGCGGTGGACACGGAGGATCCCCGGACGAGCGTGGTGGTGCACTTGTAC
GAGCCGTACATCGACGCTTGCCGCCGCTTGAACAGATTCTTGGAGGTTCT
TGCAGCAAAACAGCCCACGGTAAAGTTCTTACGGCTGAGGAGTTCCGCGG
CGGAGGGCGGCGACTACGACCCGGTGGCCTTGCCGACGCTGCTGCTGTAC
AGGGCCGGGGAGGTGGTGGGGTGCTTGACGCGAGTCACGGACGACATCGG
GGACAACTTCACGCAGGAAGACGTGGAGTGGCTGCTGCAGGAGCACGACG
TTTTCGAGGCGATCCAGGAGCCAGGGGCCGCGGCAGGGGGAGGGGGAGGG
GGGAGCGGCGCCGCTGCTGCTGGTGGAGGAGGGGTCCACGAGATATCCAC
GGGCCGAAGCCGAAGAGAAGGGGGGCTACAAGAGAGCGACGATGACGACG
ATGACGATTGCTGA
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