prot_P-littoralis_Contig91.10.5 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig91.10.5
Unique Nameprot_P-littoralis_Contig91.10.5
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length457
Homology
BLAST of mRNA_P-littoralis_Contig91.10.5 vs. uniprot
Match: D8LTB5_ECTSI (Protein-serine/threonine phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTB5_ECTSI)

HSP 1 Score: 252 bits (643), Expect = 8.080e-76
Identity = 135/185 (72.97%), Postives = 147/185 (79.46%), Query Frame = 0
Query:  123 KRVDQMEVAGWRISANAILE-GKAAAGAGMRETGQGGHGISRRKFAVVCSSNVNRSIMAEILLKENNIRARSFGTGREVKLPGKDSKSPQSFPFGTPYVEIRDFLARQNEALFRRNSVLGLLERDATTKRAPERWQSLESEDVASFDVVVCFESRVFDLVVEGTFALYMDGVELCFRSQCCHVIC 306
            KR  Q E+ GWR +ANAIL  G    GAG R +     G SR+ FAVVCSSNVNRSIMAEILLKE++IRA+S+GTGREV+LPGKDSKSPQSFPFGTPYVEIRDFLARQNEALFRRNSVLGLLER+ATTKRAPERWQSL+ E VASFDVVVCFESRVFDLVVEG          L   S+CC   C
Sbjct:  100 KREPQQELEGWRAAANAILSAGVKEDGAGSRSSKGESSGSSRKSFAVVCSSNVNRSIMAEILLKEHDIRAQSYGTGREVRLPGKDSKSPQSFPFGTPYVEIRDFLARQNEALFRRNSVLGLLERNATTKRAPERWQSLDGEHVASFDVVVCFESRVFDLVVEGILTFLCS---LGVNSRCCGGRC 281          
BLAST of mRNA_P-littoralis_Contig91.10.5 vs. uniprot
Match: A0A6H5JLZ3_9PHAE (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLZ3_9PHAE)

HSP 1 Score: 191 bits (485), Expect = 2.260e-55
Identity = 95/105 (90.48%), Postives = 102/105 (97.14%), Query Frame = 0
Query:  179 MAEILLKENNIRARSFGTGREVKLPGKDSKSPQSFPFGTPYVEIRDFLARQNEALFRRNSVLGLLERDATTKRAPERWQSLESEDVASFDVVVCFESRVFDLVVE 283
            MAEILLKE+++RA+SFGTGREV+LPGKDSKSPQSFPFGTPYVEIRDFLARQNEALFRRNSVLGLLER+ATTKRAPERWQSL+   VASFDVVVCFESRVFDLVVE
Sbjct:    1 MAEILLKEHDMRAQSFGTGREVRLPGKDSKSPQSFPFGTPYVEIRDFLARQNEALFRRNSVLGLLERNATTKRAPERWQSLDGGHVASFDVVVCFESRVFDLVVE 105          
BLAST of mRNA_P-littoralis_Contig91.10.5 vs. uniprot
Match: D8LSD4_ECTSI (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSD4_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 1.420e-41
Identity = 76/124 (61.29%), Postives = 99/124 (79.84%), Query Frame = 0
Query:  162 SRRKFAVVCSSNVNRSIMAEILLKENNIRARSFGTGREVKLPGKDSKSPQSFPFGTPYVEIRDFLARQNEALFRRNSVLGLLERDATTKRAPERWQSLESEDVASFDVVVCFESRVFDLVVEGT 285
            S+R+FAVVCS+N NRS+MA  LLKE+N +  S+GTGREV+LPGKD  SP+ FPFGTPY +I D L  ++EALF +N++L L+ R+A  K AP+R+Q +E  D+A FDVV+CFE+RVF LVVEGT
Sbjct:  102 SKRRFAVVCSANFNRSMMAHKLLKEHNFQVESYGTGREVRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQEIEGPDMADFDVVLCFETRVFYLVVEGT 225          
BLAST of mRNA_P-littoralis_Contig91.10.5 vs. uniprot
Match: A0A6H5KZG9_9PHAE (Protein-serine/threonine phosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZG9_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 4.170e-38
Identity = 74/122 (60.66%), Postives = 97/122 (79.51%), Query Frame = 0
Query:  162 SRRKFAVVCSSNVNRSIMAEILLKENNIRARSFGTGREVKLPGKDSKSPQSFPFGTPYVEIRDFLARQNEALFRRNSVLGLLERDATTKRAPERWQSLESEDVASFDVVVCFESRVFDLVVE 283
            S+R+FAVVCS+N NRS+MA  LLKE+N +  S+GTGREV+LPGKD  SP+ FPFGTPY +I D L  ++EALF +N++L L+ R+A  K AP+R+Q +E  D+A FDVV+CFE+RVF LVVE
Sbjct:  198 SKRRFAVVCSANFNRSMMAHKLLKEHNFQVESYGTGREVRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQEIEGPDMADFDVVLCFETRVFYLVVE 319          
BLAST of mRNA_P-littoralis_Contig91.10.5 vs. uniprot
Match: A0A835Z2K1_9STRA (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2K1_9STRA)

HSP 1 Score: 137 bits (346), Expect = 7.940e-35
Identity = 63/116 (54.31%), Postives = 85/116 (73.28%), Query Frame = 0
Query:  168 VVCSSNVNRSIMAEILLKENNIRARSFGTGREVKLPGKDSKSPQSFPFGTPYVEIRDFLARQNEALFRRNSVLGLLERDATTKRAPERWQSLESEDVASFDVVVCFESRVFDLVVE 283
            +VCSSNVNRS++ +I+L++ N+   SFG G +VKLPG+    P  FPFGTPY+E+ D L   ++ L+ RN VL LL RDA TKR PERWQ L S  V ++DVV+CFE+R+FD+ V+
Sbjct:    1 MVCSSNVNRSVLGQIVLEKMNMAVSSFGVGTDVKLPGRSRGEPAVFPFGTPYIEMHDILWAADKQLYTRNGVLRLLARDACTKRHPERWQDLPSAAVVAYDVVICFENRIFDICVQ 116          
BLAST of mRNA_P-littoralis_Contig91.10.5 vs. uniprot
Match: B7G244_PHATC (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G244_PHATC)

HSP 1 Score: 125 bits (314), Expect = 1.950e-30
Identity = 61/124 (49.19%), Postives = 81/124 (65.32%), Query Frame = 0
Query:  162 SRRKFAVVCSSNVNRSIMAEILLKENNIRARSFGTGREVKLPGKDSKSPQSFPFGTPYVEIRDFLARQNE--ALFRRNSVLGLLERDATTKRAPERWQSLESEDVASFDVVVCFESRVFDLVVE 283
            S+  F VVCSSN+NRS+ A ++L    ++  S+GTG +V+LPG+ +  P+ F FGTPY E+   ++   E  A F RN VL L  R A  KRAPERWQ + SED A  DVV+ FE R+FD V+E
Sbjct:    2 SKLSFGVVCSSNINRSMEAHVVLGNAGLQVESYGTGTQVRLPGRTAMEPRIFKFGTPYEEMYQQMSSTAEDAAYFERNGVLQLCSRGAAVKRAPERWQDISSEDAAKHDVVIAFEERIFDAVIE 125          
BLAST of mRNA_P-littoralis_Contig91.10.5 vs. uniprot
Match: A0A067BH95_SAPPC (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BH95_SAPPC)

HSP 1 Score: 124 bits (310), Expect = 2.270e-30
Identity = 59/125 (47.20%), Postives = 81/125 (64.80%), Query Frame = 0
Query:  166 FAVVCSSNVNRSIMAEILLKENNIRARSFGTGREVKLPGKDSKSPQSFPFGTPYVEIRDFLARQNEALFRRNSVLGLLERDATTKRAPERWQSLESEDVASFDVVVCFESRVFDLVVEGTFALYM 290
            FA++C++NVNRS  A   L    +R  SFG G +V+ PG+    P  + F TPY  +   L  +NEALFR N VL +LERD  TK+AP++WQ   + D+A  DVVVCFE R+FD+V+EG+  + M
Sbjct:    6 FAMICANNVNRSTEAHDHLHAAGLRVCSFGAGNKVRFPGRSRYEPHIYEFFTPYEVMYRELKAENEALFRHNGVLAMLERDILTKKAPQKWQDNSTTDLAQLDVVVCFEDRIFDIVLEGSLPIAM 130          
BLAST of mRNA_P-littoralis_Contig91.10.5 vs. uniprot
Match: A0A7S0QYP3_9CHLO (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QYP3_9CHLO)

HSP 1 Score: 125 bits (313), Expect = 5.020e-30
Identity = 62/124 (50.00%), Postives = 84/124 (67.74%), Query Frame = 0
Query:  160 GISRRKFAVVCSSNVNRSIMAEILLKENNIRARSFGTGREVKLPGKDSKSPQSFPFGTPYVEIRDFLARQNEALFRRNSVLGLLERDATTKRAPERWQSLESEDVASFDVVVCFESRVFDLVVE 283
            G  +++FA+VC+SN NRS+ A  +LK NN +  S+G G  VKLPG + KSP ++PFGTPY  I D L +++E L+ RN +L +LER+ T K APERWQ    +    FDVV+ FE  VF+ VVE
Sbjct:    2 GNMKKRFAMVCASNQNRSMEAHCMLKNNNFQVSSYGVGAHVKLPGPNQKSPNTYPFGTPYQYIYDDLKKKDEELYIRNGLLPMLERNITVKTAPERWQDNRDQ----FDVVLTFEESVFEKVVE 121          
BLAST of mRNA_P-littoralis_Contig91.10.5 vs. uniprot
Match: A0A7S1T7N9_9CHLO (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T7N9_9CHLO)

HSP 1 Score: 124 bits (311), Expect = 1.080e-29
Identity = 62/123 (50.41%), Postives = 82/123 (66.67%), Query Frame = 0
Query:  161 ISRRKFAVVCSSNVNRSIMAEILLKENNIRARSFGTGREVKLPGKDSKSPQSFPFGTPYVEIRDFLARQNEALFRRNSVLGLLERDATTKRAPERWQSLESEDVASFDVVVCFESRVFDLVVE 283
            +S+  FA+VC+SN NRS+ A  LLKEN  +  SFG G+ VKLPG   K P  + FGTPY  I + L++QN  L+ RN +L +++R+   KRAPERWQ    E+   FDVV+CFE RVFD  V+
Sbjct:    7 MSQLLFAMVCASNQNRSMEAHCLLKENGFQVESFGVGQHVKLPGPTQKQPNVYDFGTPYKTIWEDLSKQNAELYTRNGLLKMVQRNMGVKRAPERWQ----ENSQVFDVVICFEERVFDTCVD 125          
BLAST of mRNA_P-littoralis_Contig91.10.5 vs. uniprot
Match: A0A7S2Y8T2_9STRA (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=4 Tax=Naviculales TaxID=38748 RepID=A0A7S2Y8T2_9STRA)

HSP 1 Score: 125 bits (313), Expect = 1.210e-29
Identity = 64/150 (42.67%), Postives = 91/150 (60.67%), Query Frame = 0
Query:  159 HGISRRKFAVVCSSNVNRSIMAEILLKENNIRARSFGTGREVKLPGKDSKSPQSFPFGTPYVEIRDFL--ARQNEALFRRNSVLGLLERDATTKRAPERWQSLESEDVASFDVVVCFESRVFDLVVEGTFALYMDGVELCFRSQCCHVIC 306
            H  S+  F VVCSSN+NRS+ A ++L    +R  S+GTG +V+LPG+ +  P+ F FGTPY E+   +    ++   F RN VL L +R A  KRAP+RWQ + SED++  ++V+ FE R+FD V+E    L +      FR    HVIC
Sbjct:   23 HPKSKLSFGVVCSSNINRSMEAHVVLGNAGLRVESYGTGTQVRLPGRTAMEPRIFKFGTPYEEMHQSMNVTPEDTTYFTRNGVLQLCQRGAAVKRAPQRWQDMASEDISKHNIVIAFEERIFDAVIED---LQLRQPTEDFRPM--HVIC 167          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig91.10.5 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTB5_ECTSI8.080e-7672.97Protein-serine/threonine phosphatase n=1 Tax=Ectoc... [more]
A0A6H5JLZ3_9PHAE2.260e-5590.48RNA polymerase II subunit A C-terminal domain phos... [more]
D8LSD4_ECTSI1.420e-4161.29RNA polymerase II subunit A C-terminal domain phos... [more]
A0A6H5KZG9_9PHAE4.170e-3860.66Protein-serine/threonine phosphatase n=1 Tax=Ectoc... [more]
A0A835Z2K1_9STRA7.940e-3554.31RNA polymerase II subunit A C-terminal domain phos... [more]
B7G244_PHATC1.950e-3049.19RNA polymerase II subunit A C-terminal domain phos... [more]
A0A067BH95_SAPPC2.270e-3047.20RNA polymerase II subunit A C-terminal domain phos... [more]
A0A7S0QYP3_9CHLO5.020e-3050.00RNA polymerase II subunit A C-terminal domain phos... [more]
A0A7S1T7N9_9CHLO1.080e-2950.41RNA polymerase II subunit A C-terminal domain phos... [more]
A0A7S2Y8T2_9STRA1.210e-2942.67RNA polymerase II subunit A C-terminal domain phos... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.2300coord: 159..223
e-value: 6.2E-7
score: 31.2
coord: 225..309
e-value: 5.7E-10
score: 41.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..116
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..129
NoneNo IPR availablePANTHERPTHR20383:SF9RNA POLYMERASE II SUBUNIT A C-TERMINAL DOMAIN PHOSPHATASE SSU72coord: 165..284
IPR006811RNA polymerase II subunit APFAMPF04722Ssu72coord: 165..286
e-value: 4.6E-38
score: 130.7
IPR006811RNA polymerase II subunit APANTHERPTHR20383RNA POLYMERASE II SUBUNIT A C-TERMINAL DOMAIN PHOSPHATASEcoord: 165..284
IPR036196Phosphotyrosine protein phosphatase I superfamilySUPERFAMILY52788Phosphotyrosine protein phosphatases Icoord: 167..198

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig91contigP-littoralis_Contig91:32355..61898 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig91.10.5mRNA_P-littoralis_Contig91.10.5Pylaiella littoralis U1_48mRNAP-littoralis_Contig91 31635..61917 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig91.10.5 ID=prot_P-littoralis_Contig91.10.5|Name=mRNA_P-littoralis_Contig91.10.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=457bp
MKRAREQITKAVIEDGFPTPTPADTTGGAPAARLVNTIATTDASIPSETS
ASESASFPASPLAPPPAIKPFSYDPDEKDTAQQEGTSSSTPSSSSSSSSS
DSSNSFGGSTENGQGGGETQRRKRVDQMEVAGWRISANAILEGKAAAGAG
MRETGQGGHGISRRKFAVVCSSNVNRSIMAEILLKENNIRARSFGTGREV
KLPGKDSKSPQSFPFGTPYVEIRDFLARQNEALFRRNSVLGLLERDATTK
RAPERWQSLESEDVASFDVVVCFESRVFDLVVEGTFALYMDGVELCFRSQ
CCHVICASCIQVGFNIIGGIASVSSVRVSEAEIMVATAKGLVEEVMPRVS
VLGGCGAGSVAGLPIEMYVMPTLLIRGMMDAKRPFPCHLTSPLVFLRFCA
GRKPSESKRHARSFGLRRDKCACMAQFGCVFTTRRVFRNPNICQCFVRNV
PCGTCA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006811RNA_pol_II_suA
IPR036196Ptyr_pPase_sf