mRNA_P-littoralis_Contig91.103.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig91.103.1
Unique NamemRNA_P-littoralis_Contig91.103.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig91.103.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig91contigP-littoralis_Contig91:344882..346676 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LT93
PFAMsPkinase
Model size1349
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue0.000653
EggNOG OGsKOG0198@1|root,KOG0198@2759|Eukaryota
DescriptionMAP kinase kinase kinase activity
Cds size1347
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791814.3470762-CDS-P-littoralis_Contig91:344881..3450061680791814.3470762-CDS-P-littoralis_Contig91:344881..345006Pylaiella littoralis U1_48CDSP-littoralis_Contig91 344882..345006 -
1680791814.358346-CDS-P-littoralis_Contig91:345454..3466761680791814.358346-CDS-P-littoralis_Contig91:345454..346676Pylaiella littoralis U1_48CDSP-littoralis_Contig91 345455..346676 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig91.103.1prot_P-littoralis_Contig91.103.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig91 344882..346676 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig91.103.1

>prot_P-littoralis_Contig91.103.1 ID=prot_P-littoralis_Contig91.103.1|Name=mRNA_P-littoralis_Contig91.103.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=449bp
GIGGGGVGDAAWRSRRPFNLGRRRPPPSQQQQQQQQEGILPSSRDHLPDH
YGHRRSHHKQCLHNNGPSNSSSGRSSEHRHEDEVAAAAVAAAAAQEGDGR
RPPCRSRETAKNNSNRCLRSLRGAGSSGPVDSGSGNGHIGGQREEGQHRG
RRQQEKSEWLGITNRAPPLTPPANSGGAAAGNARLSPQVTSAAAARPTAL
QESSRRSRHWPRYQQQQQQQQPQPLEDTGSSTVSGIFGCNNSGRSGADGY
SSSSSSSSSNGENDYRKNRSLSAAVADTAIQQRQASPPSPTPPRRSSSGS
PRSDCKCHGQQQQQQQQPQQHRREEHHKRRQRRMSKGAYTAASSVVTGPS
GISTTARDGDRDPGRHQPLKFVANWSNTSSCYDSSQAEPGGEQQHQNQKP
QEAHSATAAVPRVVKSDNKSGRSHAGTADRSFATSPVTLLRRHYSNPSG
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mRNA from alignment at P-littoralis_Contig91:344882..346676-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig91.103.1 ID=mRNA_P-littoralis_Contig91.103.1|Name=mRNA_P-littoralis_Contig91.103.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1795bp|location=Sequence derived from alignment at P-littoralis_Contig91:344882..346676- (Pylaiella littoralis U1_48)
GGCATCGGCGGGGGCGGCGTGGGCGATGCTGCGTGGCGGAGTCGGCGGCC
TTTCAACCTAGGTAGGCGGCGCCCTCCGCCTTCGCAGCAACAGCAGCAAC
AGCAGCAGGAGGGGATCCTGCCGTCGAGTAGAGACCACTTGCCGGACCAT
TACGGCCACCGCCGAAGCCACCACAAGCAGTGCCTCCACAACAACGGCCC
GAGTAACAGTAGCAGCGGCAGGAGCAGCGAACACAGGCACGAAGACGAAG
TAGCCGCCGCAGCCGTAGCCGCAGCCGCCGCCCAGGAAGGAGATGGGAGG
AGACCGCCATGCCGGTCCCGTGAAACTGCGAAGAACAACAGCAATCGATG
CTTGCGAAGCTTGCGAGGAGCCGGTTCCAGCGGTCCCGTCGACAGCGGCA
GCGGCAACGGTCACATCGGAGGCCAGCGAGAAGAAGGGCAGCACCGTGGT
AGGCGGCAGCAGGAGAAGTCGGAATGGCTAGGGATAACCAACAGGGCGCC
ACCGCTGACGCCTCCGGCTAACAGCGGTGGTGCTGCTGCTGGAAACGCCA
GACTCTCACCACAGGTGACCTCGGCCGCGGCAGCAAGACCAACGGCGCTC
CAGGAGAGTAGCCGTAGGTCTCGCCATTGGCCTCGCTACCAGCAGCAGCA
ACAGCAGCAGCAGCCGCAGCCGCTGGAAGACACGGGATCGTCCACCGTGA
GCGGGATTTTCGGATGCAACAACAGCGGTAGATCCGGAGCGGATGGCTAC
AGCAGCAGCAGCAGCAGCAGCAGCAGTAACGGTGAGAACGACTACCGGAA
GAACCGTTCCCTCTCAGCGGCGGTGGCGGATACGGCAATACAGCAGCGGC
AGGCTTCTCCTCCCTCCCCGACCCCTCCACGCCGCTCCTCCTCGGGCTCT
CCTCGCAGTGATTGCAAATGTCACGGCCAACAGCAGCAACAGCAGCAACA
GCCGCAGCAGCACCGCCGCGAGGAGCACCACAAGCGGCGCCAGAGGCGCA
TGTCTAAGGGCGCGTACACGGCTGCGTCCTCCGTCGTGACCGGACCCTCA
GGTATTTCCACCACCGCTCGTGATGGCGATCGCGACCCCGGGCGCCACCA
ACCACTCAAGTTCGTGGCAAATTGGTCGAACACGAGCAGCTGCTACGACA
GCAGCCAGGCAGAACCGGGGGGAGAGCAGCAACACCAGAACCAAAAACCG
CAGGAGGCCCACTCAGCAACCGGTAGGTATTCTTTTTTTTTCTCGTCATC
GTCTGTGCAGGGGGGGGAAACTGCCTCCCACCTCCACCCCCCACCCCCAC
GCCCAGGCTCTCCGCTTCGTACAATCCACAAGCCATTGAAAAAACACCTT
GCGAGGGAGGAGTCGTCCTTGTGTCGTGTCTACTTCATGCTTTCATTTTT
CTCTGTCTATTTGTCAGTCAGCCCAGTCTGCCTGTCTGTCTGTCTGTCTG
CCTGTCTGCCTGTCTGCCTGTCTGTCAGTCAGTCGGTCAGTCAGTCAGTC
AGTTAGTAAGTCTGTCTGTCTGTCTGTATGTCTGTCTGTATGTCTATCTG
TTTGTTTCTCAACCTCTGTCTTACCTCTCCCTCCTTTCATCGCTCCACTG
TCACCGCACACCCGCACGCGTTGAAGTGTAACATTTATCTGTTCGCTTCC
TTTTCCACCTCCCGTGTCAGCTGCGGTGCCTCGGGTTGTCAAGTCTGACA
ACAAAAGTGGACGCAGCCACGCCGGTACCGCCGACCGGTCCTTCGCGACC
TCCCCGGTAACACTCCTCCGCCGGCACTATTCTAATCCTTCTGGT
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Coding sequence (CDS) from alignment at P-littoralis_Contig91:344882..346676-

>mRNA_P-littoralis_Contig91.103.1 ID=mRNA_P-littoralis_Contig91.103.1|Name=mRNA_P-littoralis_Contig91.103.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1347bp|location=Sequence derived from alignment at P-littoralis_Contig91:344882..346676- (Pylaiella littoralis U1_48)
GGCATCGGCGGGGGCGGCGTGGGCGATGCTGCGTGGCGGAGTCGGCGGCC
TTTCAACCTAGGTAGGCGGCGCCCTCCGCCTTCGCAGCAACAGCAGCAAC
AGCAGCAGGAGGGGATCCTGCCGTCGAGTAGAGACCACTTGCCGGACCAT
TACGGCCACCGCCGAAGCCACCACAAGCAGTGCCTCCACAACAACGGCCC
GAGTAACAGTAGCAGCGGCAGGAGCAGCGAACACAGGCACGAAGACGAAG
TAGCCGCCGCAGCCGTAGCCGCAGCCGCCGCCCAGGAAGGAGATGGGAGG
AGACCGCCATGCCGGTCCCGTGAAACTGCGAAGAACAACAGCAATCGATG
CTTGCGAAGCTTGCGAGGAGCCGGTTCCAGCGGTCCCGTCGACAGCGGCA
GCGGCAACGGTCACATCGGAGGCCAGCGAGAAGAAGGGCAGCACCGTGGT
AGGCGGCAGCAGGAGAAGTCGGAATGGCTAGGGATAACCAACAGGGCGCC
ACCGCTGACGCCTCCGGCTAACAGCGGTGGTGCTGCTGCTGGAAACGCCA
GACTCTCACCACAGGTGACCTCGGCCGCGGCAGCAAGACCAACGGCGCTC
CAGGAGAGTAGCCGTAGGTCTCGCCATTGGCCTCGCTACCAGCAGCAGCA
ACAGCAGCAGCAGCCGCAGCCGCTGGAAGACACGGGATCGTCCACCGTGA
GCGGGATTTTCGGATGCAACAACAGCGGTAGATCCGGAGCGGATGGCTAC
AGCAGCAGCAGCAGCAGCAGCAGCAGTAACGGTGAGAACGACTACCGGAA
GAACCGTTCCCTCTCAGCGGCGGTGGCGGATACGGCAATACAGCAGCGGC
AGGCTTCTCCTCCCTCCCCGACCCCTCCACGCCGCTCCTCCTCGGGCTCT
CCTCGCAGTGATTGCAAATGTCACGGCCAACAGCAGCAACAGCAGCAACA
GCCGCAGCAGCACCGCCGCGAGGAGCACCACAAGCGGCGCCAGAGGCGCA
TGTCTAAGGGCGCGTACACGGCTGCGTCCTCCGTCGTGACCGGACCCTCA
GGTATTTCCACCACCGCTCGTGATGGCGATCGCGACCCCGGGCGCCACCA
ACCACTCAAGTTCGTGGCAAATTGGTCGAACACGAGCAGCTGCTACGACA
GCAGCCAGGCAGAACCGGGGGGAGAGCAGCAACACCAGAACCAAAAACCG
CAGGAGGCCCACTCAGCAACCGCTGCGGTGCCTCGGGTTGTCAAGTCTGA
CAACAAAAGTGGACGCAGCCACGCCGGTACCGCCGACCGGTCCTTCGCGA
CCTCCCCGGTAACACTCCTCCGCCGGCACTATTCTAATCCTTCTGGT
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