mRNA_P-littoralis_Contig908.5.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig908.5.1 vs. uniprot
Match: A0A6H5JU73_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU73_9PHAE) HSP 1 Score: 284 bits (727), Expect = 1.270e-84 Identity = 139/233 (59.66%), Postives = 165/233 (70.82%), Query Frame = 1
Query: 604 DGFVFAIRIGCLLHILHLAVNAGMQSLFFMGPLTQASWHEWPKPHLVALLGSLWYNTSRSDSSCISWKIFQNLVFGSKGVLWKTKFIRPAETRWMVIWEGAAILEERWEQVRWLFVEWAAKVLLRTPFMSYWFKATCMLQNPLIRVHAKFCGALHKAILSWAYNWLRGEGGYFLKGPDGVPKRLPPGMRLVEVPDFSLLLLSRLIELREHPCKYFPELLYFAMQKLDDEEFEA 1302
+G +FA+RIGC LH+LHLAVNAGM+ RSDSSCISW+ FQNLVFG KGV W KFIRPAETRWMV+W+ AA+LE+RW++VRWL +EWAA LL TPFM YWFK+ CML +PLIRVHAKFC AL K +LSWAYNW+RGEGGY L+G GV +RLP GMRL ++ DFSLLL+ RL ELR HP KYFP+LL +A + L +EE A
Sbjct: 259 EGPIFAVRIGCALHVLHLAVNAGMEC--------------------------------RSDSSCISWERFQNLVFGCKGVKWGCKFIRPAETRWMVVWDAAALLEDRWDEVRWLHLEWAAAKLLGTPFMDYWFKSLCMLDDPLIRVHAKFCVALRKVVLSWAYNWIRGEGGYLLEGRGGVAERLPAGMRLADIADFSLLLVERLEELRMHPKKYFPDLLAWAEKTLSEEEVSA 459
BLAST of mRNA_P-littoralis_Contig908.5.1 vs. uniprot
Match: A0A6H5JN38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN38_9PHAE) HSP 1 Score: 227 bits (579), Expect = 3.060e-66 Identity = 112/181 (61.88%), Postives = 130/181 (71.82%), Query Frame = 1
Query: 673 MQSLFFMGPLTQASWHEWPKPHLVALLGSLWYNTSRSDSSCISWKIFQNLVFGSKGVLWKTKFIRPAETRWMVIWEGAAILEERWEQVRWLFVEWAAKVLLRTPFMSYWFKATCMLQNPLIRVHAKFCGALHKAILSWAYNWLRGEGGYFLKGPDGVPKRLPPGMRLVEVPDFSLLLLSRL 1215
M+ FFMGPL + SWHEW HLVALL +LWYN SRSDSSCISW+ +NLVF +KGV+W KFIRPAETRWMVI + AA+LEERW++ +T ML +PLIRVHAKFC AL KA+LSWAYNW+RGEGGYFL+G GV +RLPPGMRL E DFSLLL+ RL
Sbjct: 1 MECEFFMGPLGKGSWHEWEDNHLVALLATLWYNISRSDSSCISWRRVKNLVFRAKGVMWICKFIRPAETRWMVIRDAAALLEERWDE------------------------STYMLDDPLIRVHAKFCVALRKAVLSWAYNWIRGEGGYFLEGTGGVAERLPPGMRLAEAADFSLLLVKRL 157
BLAST of mRNA_P-littoralis_Contig908.5.1 vs. uniprot
Match: A0A6H5JW26_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW26_9PHAE) HSP 1 Score: 219 bits (559), Expect = 5.770e-66 Identity = 111/219 (50.68%), Postives = 145/219 (66.21%), Query Frame = 1
Query: 673 MQSLFFMGPLTQASWHEWPKPHLVALLGSLWYNTSRSDSSCISWKIFQNLVFGS--KGVLWKTKFIRPAETRWMVIWEGAAILEERWEQVRWLFVEWAAKVLLRTPFMSYWFKATCMLQNPLIRVHAKFCGALHKAILSWAYNWLRGEGGYFLKGPDGVPKRLPPGMRLVEVPDFSLLLLSRLIELREHPCKYFPELLYFAMQKLDDEEFEAFLQNFEE 1323
M S FMGPL + SWHEW + H+ +LLG +WYNTSRS SS ++ ++ +V W KFIRPAETRWMV+ +GA +L ERWEQV WLF E+AA+ L +T F +YW ++ CML++PL+RVH F L + + WAYNW+ G+GG+FLKG +GV +RL PGMRLVEV DFS LLL +L + + P YF LL L D + F+ NF E
Sbjct: 1 MTSALFMGPLGKGSWHEWERDHVFSLLGMVWYNTSRSGSSNGKFQRWKRVVAAQFPNAKPWLIKFIRPAETRWMVVMDGAKLLCERWEQVEWLFCEYAARNLNKTTFRNYWVQSACMLRDPLVRVHVMFTARLGELLFDWAYNWIHGKGGFFLKG-EGVGRRLSPGMRLVEVADFSRLLLQKLETIHKDPQTYFAALLDRVRTTLSDPMAKVFMLNFSE 218
BLAST of mRNA_P-littoralis_Contig908.5.1 vs. uniprot
Match: D7FIQ1_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ1_ECTSI) HSP 1 Score: 215 bits (548), Expect = 4.860e-61 Identity = 107/219 (48.86%), Postives = 150/219 (68.49%), Query Frame = 1
Query: 673 MQSLFFMGPLTQASWHEWPKPHLVALLGSLWYNTSRSDSSCISWKIFQNLVFGS--KGVLWKTKFIRPAETRWMVIWEGAAILEERWEQVRWLFVEWAAKVLLRTPFMSYWFKATCMLQNPLIRVHAKFCGALHKAILSWAYNWLRGEGGYFLKGPDGVPKRLPPGMRLVEVPDFSLLLLSRLIELREHPCKYFPELLYFAMQKLDDEEFEAFLQNFEE 1323
M S++FMGPL + SWHEW + H+ +LLG +WYNTSRS+SS +++ ++ +V W KF+RPAETRWMV+ +GA +L +RWEQV WLF E+AA+ L +T F +YW ++ ML++PL+RVH F L + + WAYNW+RG+GG+FLKG +GV ++L PGMRLVEV DFS LLL +L +R+ P YF +L L + + F+ NF E
Sbjct: 1 MTSVYFMGPLGKGSWHEWERDHVFSLLGMVWYNTSRSESSNANFQRWKRVVQQQFPDAKPWLIKFVRPAETRWMVVMDGAKLLCKRWEQVEWLFCEYAARNLNKTTFRNYWLQSAYMLRDPLVRVHVMFTARLGELLFDWAYNWIRGKGGFFLKG-EGVGRQLFPGMRLVEVADFSRLLLVKLETIRKDPKTYFAAVLERVQTTLSEAMAKLFMTNFSE 218
BLAST of mRNA_P-littoralis_Contig908.5.1 vs. uniprot
Match: A0A6H5JI13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI13_9PHAE) HSP 1 Score: 211 bits (538), Expect = 6.400e-60 Identity = 105/207 (50.72%), Postives = 138/207 (66.67%), Query Frame = 1
Query: 673 MQSLFFMGPLTQASWHEWPKPHLVALLGSLWYNTSRSDSSCISWKIFQNLVFGS--KGVLWKTKFIRPAETRWMVIWEGAAILEERWEQVRWLFVEWAAKVLLRTPFMSYWFKATCMLQNPLIRVHAKFCGALHKAILSWAYNWLRGEGGYFLKGPDGVPKRLPPGMRLVEVPDFSLLLLSRLIELREHPCKYFPELLYFAMQKLDD 1287
M S FMGPL + SWHEW + H+ +LLG +WYNTSRS+ S S++ ++ +V W KFIRPAETRWMV+ +GA +L ERWEQV WLF E+AA+ L +T F +YW ++ CML++PL+RVH F L + + WAYNW+ G+GG+FLKG +GV +RL P MRLVE DFS LLL +L +R+ P Y LL L D
Sbjct: 1 MTSALFMGPLGKGSWHEWERDHVFSLLGMVWYNTSRSEPSNASFQRWKRVVAAQFPNAKPWLIKFIRPAETRWMVVMDGAKLLCERWEQVEWLFCEYAARNLNKTTFRNYWVQSACMLRDPLVRVHVMFTARLGELLFDWAYNWIHGKGGFFLKG-EGVGRRLFPAMRLVEAADFSCLLLQKLETIRKDPQTYVAALLDRVRTTLSD 206
BLAST of mRNA_P-littoralis_Contig908.5.1 vs. uniprot
Match: A0A6H5KSR2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSR2_9PHAE) HSP 1 Score: 181 bits (460), Expect = 4.890e-52 Identity = 85/163 (52.15%), Postives = 115/163 (70.55%), Query Frame = 1
Query: 673 MQSLFFMGPLTQASWHEWPKPHLVALLGSLWYNTSRSDSSCISWKIFQNLVFGS--KGVLWKTKFIRPAETRWMVIWEGAAILEERWEQVRWLFVEWAAKVLLRTPFMSYWFKATCMLQNPLIRVHAKFCGALHKAILSWAYNWLRGEGGYFLKGPDGVPKRL 1155
M S FMGPL + SWHEW + H+ +LLG +WYNTSRS SS +++ ++ +V W KFIRPAETRWMV+ +GA +L ERWEQV WLF E+AA+ L +T F +YW ++ CML++PL+RVH F L + + WAYNW+ G+GG+FLKG +GV +RL
Sbjct: 1 MTSALFMGPLGKGSWHEWERDHVFSLLGMVWYNTSRSGSSNGNFQRWKRVVAAQFPNAKPWLIKFIRPAETRWMVVMDGAKLLCERWEQVEWLFCEYAARNLNKTTFRNYWVQSACMLRDPLVRVHVMFTARLGELLFDWAYNWIHGKGGFFLKG-EGVGRRL 162
BLAST of mRNA_P-littoralis_Contig908.5.1 vs. uniprot
Match: A0A6H5KH75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH75_9PHAE) HSP 1 Score: 191 bits (484), Expect = 2.910e-51 Identity = 107/264 (40.53%), Postives = 142/264 (53.79%), Query Frame = 1
Query: 673 MQSLFFMGPLTQASWHEWPKPHLVALLGSLWYNTSRSDSSCISWKIFQNLVFGS--KGVLWKTKFIRPAETRWMVIWEGAAILEERWEQVRWLFVEWAAKVLLRTPFMSYWFKATCMLQNPLIRVHAKF--------------------------------CGALHKA-------------------------------ILSWAYNWLRGEGGYFLKGPDGVPKRLPPGMRLVEVPDFSLLLLSRLIELREHPCKYFPELLYFA 1269
M S FMGPL + SWHEW + H+ +LLG +WYNTSRS+SS +++ ++ +V W KFIRPAETRWMV+ +GA +L ERWEQV WLF E+AA+ L +T F +YW ++ CML++PL+RVH F G L+K + WAYNW+ G+GG+FLKG +GV +RL PGMRLVEV DFS LLL +L + + P YF + Y A
Sbjct: 1 MTSALFMGPLGKGSWHEWERDHIFSLLGMVWYNTSRSESSNANFQRWKRIVAAQFPNAKPWLIKFIRPAETRWMVVMDGAKLLCERWEQVEWLFCEYAARNLNKTTFRNYWVQSACMLRDPLVRVHVMFTARLGELLFDWAAKGSXCERWEQVEWLFCEYAAGNLNKTTYRNYWVQSACMLRDPLVRVHVMFTARLGELLFDWAYNWIHGKGGFFLKG-EGVGRRLSPGMRLVEVADFSRLLLQKLETIHKDPQTYFXQQGYLA 263
BLAST of mRNA_P-littoralis_Contig908.5.1 vs. uniprot
Match: A0A6H5KE81_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE81_9PHAE) HSP 1 Score: 165 bits (418), Expect = 7.290e-45 Identity = 84/165 (50.91%), Postives = 112/165 (67.88%), Query Frame = 1
Query: 760 LWYNTSRSDSSCISWKIFQNLVFGSKGVL--WKTKFIRPAETRWMVIWEGAAILEERWEQVRWLFVEWAAKVLLRTPFMSYWFKATCMLQNPLIRVHAKFCGALHKAILSWAYNWLRGEGGYFLKGPDGVPKRLPPGMRLVEVPDFSLLLLSRLIELREHPCKYF 1248
+WYNTSRS+SS ++ +Q LV W KFI+PAETRWMV+ +GA IL ERW++V WLF EWAA + +T + +YW K+ LQ+PL+ V F L + + WAYNW+RG+GG+FLK +GV +RL PGMRLVEV DFS LLL ++ +R+ P YF
Sbjct: 2 VWYNTSRSNSSNTNFLRWQKLVADEFPAAKPWTKKFIKPAETRWMVVMDGAKILFERWDEVAWLFGEWAACNIGKTTYRNYWLKSAVALQDPLMLVQVMFAARLGELVFDWAYNWIRGKGGFFLKC-EGVGRRLFPGMRLVEVADFSRLLLQKVETIRKEPKTYF 165
BLAST of mRNA_P-littoralis_Contig908.5.1 vs. uniprot
Match: A0A6H5L8G1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8G1_9PHAE) HSP 1 Score: 154 bits (390), Expect = 2.460e-40 Identity = 89/217 (41.01%), Postives = 122/217 (56.22%), Query Frame = 1
Query: 673 MQSLFFMGPLTQASWHEWPKPHLVALLGSLWYNTSRSDSSCISWKIFQNLVFGSKGVLWKTKFIRPAETRWMVIWEGAAILEERWEQVRWLFVEWAAKVLLRTPFMSYWFKATCMLQNPLIRVHAKFCGALHKAILSWAYNWLRGEGGYFLKGPDGVPKRLPPGMRLVEVPDFSLLLLSRLIELREHPCKYFPELLYFAMQKLDDEEFEAFLQNFEE 1323
M SL+FMGPL + SWHEW + H+ +LLG +WY+TSRS+SS N F +RW++V L E+AA+ L +T F +YW ++ ML+NPL+RVH F L + + WA NW+RG+GG+FLKG +GV +RL PGMRLVEV D S LLL +L +R+ P YF +L L + + F+ NF E
Sbjct: 1 MTSLYFMGPLGKGSWHEWERDHVFSLLGMVWYSTSRSESS--------NANF------------------------------QRWKRVEKLVREYAARYLNKTTFRNYWLQSAYMLRNPLVRVHVVFTARLGELLFDWANNWIRGKGGFFLKG-EGVGRRLFPGMRLVEVADCSRLLLLKLETIRKDPKTYFAAVLERVRTTLSEPMEKLFMTNFSE 178
BLAST of mRNA_P-littoralis_Contig908.5.1 vs. uniprot
Match: A0A6H5KP72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP72_9PHAE) HSP 1 Score: 150 bits (380), Expect = 5.020e-40 Identity = 84/196 (42.86%), Postives = 114/196 (58.16%), Query Frame = 1
Query: 673 MQSLFFMGPLTQASWHEWPKPHLVALLGSLWYNTSRSDSSCISWKIFQNLVFGSKGVLWKTKFIRPAETRWMVIWEGAAILEERWEQVRWLFVEWAAKVLLRTPFMSYWFKATCMLQNPLIRVHAKFCGALHKAILSWAYNWLRGEGGYFLKGPDGVPKRLPPGMRLVEVPDFSLLLLSRLIELREHPCKYFPELL 1260
M SL+FMGPL + SWHEW + H+ +LLG +WY+TSRS+SS N F +RW++V L E+AA+ L +T F +YW ++ ML+NPL+RVH F L + + WA NW+RG+GG+FLKG +GV +RL PGMRLVEV D S LLL +L +R+ P YF +L
Sbjct: 1 MTSLYFMGPLGKGSWHEWERDHVFSLLGMVWYSTSRSESS--------NANF------------------------------QRWKRVEKLVREYAARYLNKTTFRNYWLQSAYMLRNPLVRVHVVFTARLGELLFDWANNWIRGKGGFFLKG-EGVGRRLFPGMRLVEVADCSRLLLLKLETIRKDPKTYFAAVL 157 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig908.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig908.5.1 >prot_P-littoralis_Contig908.5.1 ID=prot_P-littoralis_Contig908.5.1|Name=mRNA_P-littoralis_Contig908.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=274bp MADSAQGRGQQPQSNNQSQQAESEPAPAAAASAFDGFVFAIRIGCLLHILback to top mRNA from alignment at P-littoralis_Contig908:7715..9374- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig908.5.1 ID=mRNA_P-littoralis_Contig908.5.1|Name=mRNA_P-littoralis_Contig908.5.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1660bp|location=Sequence derived from alignment at P-littoralis_Contig908:7715..9374- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig908:7715..9374- >mRNA_P-littoralis_Contig908.5.1 ID=mRNA_P-littoralis_Contig908.5.1|Name=mRNA_P-littoralis_Contig908.5.1|organism=Pylaiella littoralis U1_48|type=CDS|length=822bp|location=Sequence derived from alignment at P-littoralis_Contig908:7715..9374- (Pylaiella littoralis U1_48)back to top |