prot_P-littoralis_Contig907.8.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig907.8.1
Unique Nameprot_P-littoralis_Contig907.8.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length143
Homology
BLAST of mRNA_P-littoralis_Contig907.8.1 vs. uniprot
Match: A0A6H5KQZ5_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ5_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 3.830e-29
Identity = 65/136 (47.79%), Postives = 77/136 (56.62%), Query Frame = 0
Query:    6 DLTLVELEELSAGLARMIKTERVDWDTRLAYILMAKCGVGHKNKGGRRTYKEVPLYDGNGAKSVKVCRGGTCVNGDDPTARFKSKRTRGVCWCSICSNGLGKMRAVHLCKQCRASTQGHVAAALEAD-RHYTAINW 140
            DLT+ EL E    L + +K ERVDWD RLA  LM+ C VGH   G RR  K    Y  NGA S +VC G  C     P + +   RTRG CWC IC+NGLGK RA+ LC +C    + HVAA   A  R Y  I+W
Sbjct:  356 DLTVAELREFQTLLKKAMKMERVDWDRRLANHLMSLCNVGHTENGARRATKPSESYLVNGACSSRVCHGRGCKT--PPGSPYAGTRTRGACWCDICTNGLGKDRALILCTKCHKVPEAHVAAREWATGRKYKPISW 489          
BLAST of mRNA_P-littoralis_Contig907.8.1 vs. uniprot
Match: A0A6H5KC21_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC21_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 2.650e-28
Identity = 62/136 (45.59%), Postives = 75/136 (55.15%), Query Frame = 0
Query:    7 LTLVELEELSAGLARMIKTERVDWDTRLAYILMAKCGVGHKNKGGRRTYKEVPLYDGNGAKSVKVCRGGTCVNGDDPTARFKSKRTRGVCWCSICSNGLGKMRAVHLCKQCRASTQGHVAAALEA-DRHYTAINWA 141
            LT+ EL E  + L + +K ERVDWD RLA  LM+ C VGH   G RR  K V  Y    AKS  VC GG C       +R+   RTRGVCWC  C++GLGK RA+ LC  C      HV A   A +R Y   +W+
Sbjct:  128 LTVAELREFQS-LKKAMKVERVDWDRRLANHLMSLCSVGHTETGARRATKAVETYSVKDAKSSLVCYGGICEK-TAKASRYTGSRTRGVCWCDACTDGLGKDRALILCTMCHRVPAAHVTARKHAAERKYKPNSWS 261          
BLAST of mRNA_P-littoralis_Contig907.8.1 vs. uniprot
Match: A0A6H5JDZ7_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDZ7_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 1.020e-22
Identity = 56/126 (44.44%), Postives = 68/126 (53.97%), Query Frame = 0
Query:    6 DLTLVELEELSAGLARMIKTERVDWDTRLAYILMAKCGVGHKNKGGRRTYKEVPLYDGNGAKSVKVCRGGTCVNGDDPTARFKSKRTRGVCWCSICSNGLGKMRAVHLCKQCRASTQGHVAAALEA 131
            DLT+ EL E  + + + +K ERVDWD RLA  LM+ C V H      RT K V  Y   GAKS  VC GG C       +R    RTR VCWC  C++GLGK RA+ LC +C      +V A   A
Sbjct:  473 DLTVAELREFQSLVKKAMKVERVDWDRRLANHLMSLCSVCHTETRASRTTKPVETYSVKGAKSSLVCYGGICEE-TAKASRCTGSRTRVVCWCDTCTDGLGKDRALILCTKCNKVPAANVTARKHA 597          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig907.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KQZ5_9PHAE3.830e-2947.79DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5KC21_9PHAE2.650e-2845.59DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JDZ7_9PHAE1.020e-2244.44DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig907contigP-littoralis_Contig907:38973..39401 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig907.8.1mRNA_P-littoralis_Contig907.8.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig907 38901..44112 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig907.8.1 ID=prot_P-littoralis_Contig907.8.1|Name=mRNA_P-littoralis_Contig907.8.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=143bp
MGGGGDLTLVELEELSAGLARMIKTERVDWDTRLAYILMAKCGVGHKNKG
GRRTYKEVPLYDGNGAKSVKVCRGGTCVNGDDPTARFKSKRTRGVCWCSI
CSNGLGKMRAVHLCKQCRASTQGHVAAALEADRHYTAINWAT*
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