mRNA_P-littoralis_Contig907.8.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig907.8.1 vs. uniprot
Match: A0A6H5JHH7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHH7_9PHAE) HSP 1 Score: 265 bits (677), Expect = 4.090e-76 Identity = 205/578 (35.47%), Postives = 275/578 (47.58%), Query Frame = 1
Query: 493 VDECDTRGAATKVEKEQGAHYRKASKIEDPKFREAYEKVWHLKNHD-QKPKKGQPPPPLGPHDPKGWVTDGLPVDETSPAFLRRNKHKGGRKFSLTSDLLERLPKVNRQGLQAVRDFVGGKG---PYLLSSSSRSAS------RERPRTSFYRRPTATPTSARRLPTRPRSRRCATRRRSGGRGSSGYLQPRTRTRRMWPTFSGITCTG*LASSSRAGSRRNGVSPTTGGITGPRLQPGTRM-HAS*LVPP---LLFSLLPHRAPDRQG*QEGPQLRLQASHQVQCCFLLRGF-HMMSRWSSARLDLCFHHEVQPEEAHQTWRRVAGANGEVLTSMQPVVRLDYTGGMGGVDVADQRLTPHAHVHKPMTYFWRRVFDQKLQQAISNAYLLFLMWAEVLLA*CKAVLAERREGGHAAGSAA-----------GAAEQMGGGGDLTLVELEELSAGLARMIKTERVDWDTRLAYILMAKCGVGHKNKGGRRTYKEVPLYDGNGAKSVKVCRGGTCVNGDDPTARFKSKRTRGVCWCSICSNGLGKMRAVHLCKQCRASTQGHVAAALEAD-RHYTAINWA 2145
+DE T GA + + K + HY + SKIED FR A E VWHLK KPK G+PPP P DPKGW +GLP DE+S RR+K GG FSL+ L L K ++QGL +R FV KG P++ + RE + + P + P R R+++ + + + RTRT RM + T +S+S + + PG + H +V ++F L+ + ++L CC F + S + L + ++ +T + A NGE ++S QP+ R +Y MGGVDVADQRL HA H+PMT+FWRRVF QK QA+SNA+LLF WA VL C L + G AA+ DLT+ EL E + + + +K ERVDWD RLA LM+ C VGH G RRT K V +Y GAKS VC GG C + R+K RTRGVCWC C++G GK RA+ LC +C HV A A R Y I+W+
Sbjct: 1 MDELQTPGARSSIAKSKELHYAQTSKIEDEGFRRAQESVWHLKRIKLPKPKAGEPPPSPIPDDPKGWGFEGLPRDESSDPCKRRHKIPGGDTFSLSDQLKPSLSKADKQGLAVLRSFVSEKGGGLPFMFFEKTFPMEAQDVVLREMNGYVNFCADESDPPLEHQEP-RHRAKKV----------TRDFRRCRTRTWRM-----DLESTP--SSASTCMPHNGELEDVLNKCWSELVDPGACLSHDEQMVKSTARVMFMLMRFN--------KSKPIKLGIKCWAICCPSGYCFVQSIDGGFSGDIKLKPYATCPVGKSARTVVKRAADNGEKVSSSQPLARKEYVKNMGGVDVADQRLGAHARTHRPMTFFWRRVFAQKFSQAVSNAWLLFYEWAGVLAKQCTVALDAATQDGEVGDXXXXXXXXXXXXXXAAADSC----DLTVAELREFQSLVKKAMKVERVDWDRRLANHLMSLCSVGHTETGARRTAKPVEMYSVKGAKSSLVCYGGHCEETAKASRRYKGSRTRGVCWCDTCTDGSGKDRALILCTKCNKVPAAHVTARKHAAARKYKPISWS 548
BLAST of mRNA_P-littoralis_Contig907.8.1 vs. uniprot
Match: A0A6H5KQZ5_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ5_9PHAE) HSP 1 Score: 219 bits (558), Expect = 1.050e-59 Identity = 124/248 (50.00%), Postives = 149/248 (60.08%), Query Frame = 1
Query: 1414 RRVAGANGEVLTSMQPVVRLDYTGGMGGVDVADQRLTPHAHVHKPMTYFWRRVFDQKLQQAISNAYLLFLMWAEVLLA*CKAVL-AERREGGHAAGSAAGAAEQMGGGGD---LTLVELEELSAGLARMIKTERVDWDTRLAYILMAKCGVGHKNKGGRRTYKEVPLYDGNGAKSVKVCRGGTCVNGDDPTARFKSKRTRGVCWCSICSNGLGKMRAVHLCKQCRASTQGHVAAALEAD-RHYTAINW 2142
+R A NGE ++S QP+ R +Y MGGVDVADQRL HAH H+PMT+FWRRVFDQK QA+SN +LLF WA VL+ C A L A ++GG AG AE+ G D LT+ EL E L + +K ERVDWD RLA LM+ C VGH G RR K Y NGA S +VC G C P + + RTRG CWC IC+NGLGK RA+ LC +C + HVAA A R Y I+W
Sbjct: 247 KRAANNNGEKVSSRQPLARKEYVKNMGGVDVADQRLGSHAHKHRPMTFFWRRVFDQKFAQAVSNGWLLFYEWAGVLVTQCTAALEAATQDGGM---GDAGEAEEGGVAADSCDLTVAELREFQTLLKKAMKMERVDWDRRLANHLMSLCNVGHTENGARRATKPSESYLVNGACSSRVCHGRGCKT--PPGSPYAGTRTRGACWCDICTNGLGKDRALILCTKCHKVPEAHVAAREWATGRKYKPISW 489
BLAST of mRNA_P-littoralis_Contig907.8.1 vs. uniprot
Match: A0A6H5JWA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWA2_9PHAE) HSP 1 Score: 166 bits (419), Expect = 6.910e-43 Identity = 102/254 (40.16%), Postives = 120/254 (47.24%), Query Frame = 1
Query: 1528 HAHVHKPMTYFWRRVFDQKLQQAISNAYLLFLMWAEVLLA*CKAVLAERR----------------------------------EGGHAA------------GSAAGAAEQMGGGGDLTLVELEELSAGLARMIKTERVDWDTRLAYILMAKCGVGHKNKGGRRTYKEVPLYDGNGAKSVKVCRGGTCVNGDDPTARFKSKRTRGVCWCSICSNGLGKMRAVHLCKQCRASTQGHVAAALEAD--RHYTAINWA 2145
H H HKP T+FWRRVFDQ L QAISNAYLL+ WA + C A L EGG E L+ ELEE L + + ERV WD RL+ LMAKC VG N GGRR VP YD GAK +VC+GG+C G+ R++SKRT GVCWC++CS GK RA+HLC C+ H AAA AD R Y I+WA
Sbjct: 3 HQHHHKPKTFFWRRVFDQNLAQAISNAYLLYAAWAGIFATQCTAALEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDWEGGDEEEXXXXXXXXXXXXXXXXXGEGESTDAPLSKEELEEFGVLLKKCLAMERVTWDQRLSTHLMAKCNVGTLNSGGRRAGPVVPPYDSKGAKCARVCKGGSC--GNKTGGRYRSKRTTGVCWCNVCSGSKGKARALHLCHTCKKIPSAHGAAAEAADKKRKYKPIDWA 254
BLAST of mRNA_P-littoralis_Contig907.8.1 vs. uniprot
Match: A0A6H5K756_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K756_9PHAE) HSP 1 Score: 171 bits (434), Expect = 1.320e-42 Identity = 104/222 (46.85%), Postives = 125/222 (56.31%), Query Frame = 1
Query: 250 IISRGPKKGTPCGKRAGGRVVGLCKHHDDKQQRRRTPAAQGGAXXXXXXXXXXXXXXXXXXXAAGGDDESNYGSDEEVGGGVDECDTRGAATKVEKEQGAHYRKASKIEDPKFREAYEKVWHLKNHD-QKPKKGQPPPPLGPHDPKGWVTDGLPVDETSPAFLRRNKHKGGRKFSLTSDLLERLPKVNRQGLQAVRDFVGGKGPYLLSSSSRSASRERPRTS 912
IS G ++G CG + G R G CKHHD Q+RR+T A G A G + NY S+ E+GGG+DE T GA + K + HY +ASKIED FR A E VWHLK KPK G+PPPP P DPKGWV +GLP DE+S + RR+KH GG FSL+ L LPKV++QGL +R FV GKG L R SR R RTS
Sbjct: 280 FISPGERRGEKCGNKVGDRTAGFCKHHDGLQKRRKT--ASGAALG-----------------VGGSVEAGNYDSESELGGGMDELQTPGARPFIAKSKELHYAQASKIEDEGFRRAQESVWHLKRIKLPKPKAGEPPPPPIPDDPKGWVFEGLPRDESSNPYKRRHKHPGGDNFSLSDQLKASLPKVDKQGLAVLRSFVNGKGGGLPFMFLRRLSRRRRRTS 482
BLAST of mRNA_P-littoralis_Contig907.8.1 vs. uniprot
Match: A0A6H5JDZ7_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDZ7_9PHAE) HSP 1 Score: 173 bits (439), Expect = 2.030e-42 Identity = 122/333 (36.64%), Postives = 145/333 (43.54%), Query Frame = 1
Query: 1414 RRVAGANGEVLTSMQPVVRLDYTGGMGGVDVADQRLTPHAHVHKPMTYFWRRVFDQKLQQAISNAYLLFLMWAEVLLA*CKAVLAERREGGHAA--------------GSAAG-------------------------------------------------------AAEQMGGGGD---------------------LTLVELEELSAGLARMIKTERVDWDTRLAYILMAKCGVGHKNKGGRRTYKEVPLYDGNGAKSVKVCRGGTCVNGDDPTARFKSKRTRGVCWCSICSNGLGKMRAVHLCKQCRASTQGHVAAALEAD-RHYTAIN 2139
+R A NGE ++S QP+ R Y MGGVDVADQRL HAH H+PMT+FWRRVFDQKL A+SNA+LLF WA VL C A L + G A G+AA AA Q GG GD LT+ EL E + + + +K ERVDWD RLA LM+ C V H RT K V Y GAKS VC GG C +R RTR VCWC C++GLGK RA+ LC +C +V A A R Y I+
Sbjct: 275 KRAADNNGEKVSSSQPLARKKYVKNMGGVDVADQRLGAHAHTHRPMTFFWRRVFDQKLSHAVSNAWLLFYEWAWVLATQCTAALEAATQHGGAGDXXXXXXXXXXXXXGAAADSCDLTVAELXARITPMTFFWRRVFDQKLSHAVSNAWLLFYEWAWVLATQCTAALEAATQHGGAGDXXXXXXXXXXXXXXAAADSCDLTVAELREFQSLVKKAMKVERVDWDRRLANHLMSLCSVCHTETRASRTTKPVETYSVKGAKSSLVCYGGICEE-TAKASRCTGSRTRVVCWCDTCTDGLGKDRALILCTKCNKVPAANVTARKHAAARKYKPIS 606
BLAST of mRNA_P-littoralis_Contig907.8.1 vs. uniprot
Match: A0A6H5JTJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTJ5_9PHAE) HSP 1 Score: 170 bits (430), Expect = 2.290e-42 Identity = 133/446 (29.82%), Postives = 168/446 (37.67%), Query Frame = 1
Query: 250 IISRGPKKGTPCGKRAGGRVVGLCKHHDDKQQRRRTPAAQGGAXXXXXXXXXXXXXXXXXXXAAGGDDESNYGSDEEVGGGVDECDTRGAATKVEKEQGAHYRKASKIEDPKFREAYEKVWHLKNHD-QKPKKGQPPPPLGPHDPKGWVTDGLPVDETSPAFLRRNKHKGGRKFSLTSDLLERLPKVNRQGLQAVRDFVGGKGPYLLSSSSRSASRERPRTSFYRRPTATPTSARRLPTRPRSRRCATRRRSGGRGSSGYLQPRTRTRRMWPTFSGITCTG*LASSSRAGSRRNGVSPTTGGITGPRLQPGTRMHAS*LVPPLLFSLLPHRAPDRQG*QEGPQLRLQASHQVQCCFLLRGFHMMSRWSSARLDLCFHHEVQPEEAHQTWRRVAGANGEVLTSMQPVVRLDYTGGMGGVDVADQRLTPHAHVHKPMTYFWRRVFDQK 1584
ISRG ++G CG + GGR G CKHHD Q+ R+T A G A G + NY S+ +GGG+D T GA + K + HY ASKIED R A E VWHLK +PK G+P PP P DPKGWV +GLP DE+S + RR+KH GG KFSL+ L LPKV++QGL +R FV GKG L P +F + L H+V+ W+R A NGE ++S QP+ R +Y +GG++VADQRL HAH H+PMT+FWR VFDQK
Sbjct: 185 FISRGARRGEKCGNKVGGRTAGFCKHHDGLQKGRKT--ASGAALG-----------------VGGSVEAGNYDSESGLGGGMDGLQTPGARPFIAKSKELHYAPASKIEDEGSRRAQESVWHLKRIKLPQPKAGEPSPPPIPDDPKGWVFEGLPRDESSGPYKRRHKHPGGDKFSLSDQLKASLPKVDKQGLAVLRSFVNGKGGDL-------------------------------------------------------------------------------------------------------------------PFMFL----------------EKTLMTVHEVK-----------------------------------WKRAADNNGEKVSSSQPLARKEYVKNIGGLEVADQRLGAHAHTHRPMTFFWRSVFDQK 445
BLAST of mRNA_P-littoralis_Contig907.8.1 vs. uniprot
Match: A0A6H5KNU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU4_9PHAE) HSP 1 Score: 142 bits (359), Expect = 3.200e-33 Identity = 76/148 (51.35%), Postives = 92/148 (62.16%), Query Frame = 3
Query: 864 PFQFFEECFPREAQDIVLQETNSYANFCAETTNPSPLQEVRHKKKKWRKGFQWIPTTENKDKKNVADFQRHHLYGVIGILVTGGLTQKRRFTNHWGYHRTTTTAGYENACLVTCSSSSILASSTSRPRQARLTRRTPTTTPSITSGTV 1307
PF+FFEE FP QDI+L +TN Y NFCAE TNPSPLQ+ RH+KKK R G + + + D V F R H+YGV+GIL++ G+TQKRR T+HWG E+ACL T S SS SST RR +T PSITSG V
Sbjct: 247 PFKFFEEAFPPACQDIILTKTNKYVNFCAEETNPSPLQQPRHRKKKTRTGLSYGSSEDRPDGSKVYGFHRKHVYGVMGILISAGITQKRRLTDHWGVGDHDNYRMSESACLATSSRSSTAGSSTWLQSSRLSPRRIQSTIPSITSGRV 394
BLAST of mRNA_P-littoralis_Contig907.8.1 vs. uniprot
Match: A0A6H5K5P5_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5P5_9PHAE) HSP 1 Score: 144 bits (362), Expect = 1.240e-32 Identity = 76/144 (52.78%), Postives = 95/144 (65.97%), Query Frame = 1
Query: 439 AGGDDESNYGSDEEVGGGVDECDTRGAATKVEKEQGAHYRKASKIEDPKFREAYEKVWHLKNHD--QKPKKGQPPPPLGPHDPKGWVTDGLPVDETSPAFLRRNKHKGGRKFSLTSDLLERLPKVNRQGLQAVRDFVGGKGPYL 864
AG DD++N+GSD+E+GGGVDE T GA + K Q +HY++AS IED FREAYE VWHLK +K K G PP PHD +GW + G+ D S A+ RR+KH GG KF LT L+ RLPK NR GL +R+F+ GK L
Sbjct: 55 AGVDDQANFGSDDELGGGVDELQTAGADAQQSKLQHSHYQRASVIEDQGFREAYESVWHLKKKSTSKKRKAGDAPPQPAPHDERGWTSAGMKKDVESEAYKRRHKHTGGDKFQLTPSLIARLPKPNRTGLNVLRNFIDGKDKSL 198
BLAST of mRNA_P-littoralis_Contig907.8.1 vs. uniprot
Match: A0A6H5JER6_9PHAE (DDE_Tnp_1_7 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JER6_9PHAE) HSP 1 Score: 130 bits (327), Expect = 1.630e-28 Identity = 87/234 (37.18%), Postives = 117/234 (50.00%), Query Frame = 1
Query: 1417 RVAGANGEVLTSMQPVVRLDYTGGMGGVDVADQRLTPHAHVHKPMTYFWRRVFDQKLQQAISNAYLLFLMWAEVLLA*CKAVLAERREGGHAAGSAAGAAEQMGGGGDLTLVELEELSAGLARMIKTERVDWDTRLAYILMAKCGVGHKNKGGRRTYKEV----PLYDGNGAKSVKVCRGGTCVNGDDPTARFKSKRTRGVCWCSICSNGLGKMRAVHLCKQCRASTQGHVAAA 2106
R G NGE L QP R+DY M GVD+ADQ+ H H HK T FWRRV+D KL+QA++NA+L+F W E+L+ RE + + GG+L ELE S LA + K ER WD ++A +LMAKC V NKGGRR + P++ KS ++C TC K++ T+G C+ G V +C+ C S + H AA
Sbjct: 270 RAKGRNGEPLDLQQPWTRMDYFLNMLGVDLADQQNGSHTHDHKSYTNFWRRVYDAKLEQALTNAFLIFRKWVELLI----------RE--------VEPKKPITPGGELE--ELELASTELATLSKVERAVWDEQMATLLMAKCNVARPNKGGRRPASDNKPADPVWGSVTLKSGRLCLNPTC----------KTRSTKGCSCKQFCTRG--DKSGVLMCETCWKSPESHEQAA 471
BLAST of mRNA_P-littoralis_Contig907.8.1 vs. uniprot
Match: A0A6H5LEE0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEE0_9PHAE) HSP 1 Score: 129 bits (324), Expect = 3.340e-27 Identity = 91/253 (35.97%), Postives = 120/253 (47.43%), Query Frame = 1
Query: 1417 RVAGANGEVLTSMQPVVRLDYTGGMGGVDVADQRLTPHAHVHKPMTYFWRRVFDQKLQQAISNAYLLFLMWAEVLLA*CKAVLAERREGGHAAGSAAGAAEQMGGGGDLTLVELEELSAGLARMIKTERVDWDTRLAYILMAKCGVGHKNKGGRRTYKEVPLYDGNGAK----SVKVCRGGTCVNGDDPTARFKSKRTRGVC-WCSICSNGLGKMRAVHLCKQCRASTQGHVAAA------LEADRHYTAINW 2142
R G NGE L QP +R+DY M GVD+ADQ+ H H HK T FWRRV+D KL+QA++NA+L+F W E+L+ RE A + + GG+L ELE S LA + K ER WD ++A +LMA+C V NKGG+R P D A SV + G C+N T K + C W G V +C+ C S + H AA + R+ T W
Sbjct: 594 RAKGRNGEPLDLQQPYMRMDYVLNMLGVDLADQQNGSHTHDHKSYTNFWRRVYDAKLEQALTNAFLIFRKWVELLI----------RE--------VEAKKPIAPGGELE--ELELASTELATLSKVERAVWDEQMATLLMAECNVARPNKGGKR-----PASDNKPADPVWGSVTLKSGRLCLNPTCKTTSMKGCSCKQFCTW--------GDKAGVLMCETCWKSPESHEQAAKAYWDSVSEGRNRTGFEW 813 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig907.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig907.8.1 >prot_P-littoralis_Contig907.8.1 ID=prot_P-littoralis_Contig907.8.1|Name=mRNA_P-littoralis_Contig907.8.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=143bp MGGGGDLTLVELEELSAGLARMIKTERVDWDTRLAYILMAKCGVGHKNKGback to top mRNA from alignment at P-littoralis_Contig907:38901..44112- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig907.8.1 ID=mRNA_P-littoralis_Contig907.8.1|Name=mRNA_P-littoralis_Contig907.8.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5212bp|location=Sequence derived from alignment at P-littoralis_Contig907:38901..44112- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig907:38901..44112- >mRNA_P-littoralis_Contig907.8.1 ID=mRNA_P-littoralis_Contig907.8.1|Name=mRNA_P-littoralis_Contig907.8.1|organism=Pylaiella littoralis U1_48|type=CDS|length=429bp|location=Sequence derived from alignment at P-littoralis_Contig907:38901..44112- (Pylaiella littoralis U1_48)back to top |