mRNA_P-littoralis_Contig907.3.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig907.3.1
Unique NamemRNA_P-littoralis_Contig907.3.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig907.3.1 vs. uniprot
Match: A0A0F9YX66_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9YX66_9ZZZZ)

HSP 1 Score: 391 bits (1005), Expect = 1.090e-128
Identity = 232/453 (51.21%), Postives = 283/453 (62.47%), Query Frame = 1
Query:    1 MYINFENINERSDAVDVCIIGGGAAGISMAITLSKQGHRVLLCEGGDADYSERSQDSYRGETVGDTYVPLYGARLRHLGGSTNHWGGVCRPLDRYDFTAKTATSETAWPIGRNALSPYYRAAASMLDLTPTPPTSRSRGRTKTHLFFAR*PNTPER*ICRLT*RVNHA*MLP----------DSQLGRAGNTRWQGYQRHVQKLSRQL*RCVHATLCWPAVALITLACCCGVINKRRGN*FLST----KRWAAIGWSTLSRDGR*SAVFQSSSSRPGR*VQRVSLPTASTIASRQILNCGLRLHRMNAEATRELADELAEQAPTLAGRLSTWQAQGRVIHGAVLRAAWEQEPHFNNRVELSDERGCAG--RS-----P*PIGMATIRIGSSYHS*KHASARRIPSCT*PGPTAVG*LARRPPVQLPTDGELAGRHHMGARAWGLMQRKALLIP 1296
            MYI+FE+I+E S  VDVCIIGGGAAGISMAITLSKQGHRVLLCEGGDADYSERSQDSYRGETVGD Y+PLYGARLR+LGGSTNHWGGVCRPLDRYDF+AKTA SETAWPIGR+AL+PYYRAAASMLDLTPTP      G     ++F+     P R   +    ++ +  L            +Q G+  +  ++ YQ  ++++  +     +  L    +    L   C   ++ +G          + W     +T+ +    + +F  ++            PTA+TIASRQILNCGLRLHRMN EAT+EL DELAEQAPTLAGRLSTWQAQG+VIHG VLRAAWEQEPH++NRVELSDE    G  RS        +   TIR        ++  A  +      G   +       PVQLPTDGELAGRHHMG     L   + ++ P
Sbjct:    1 MYIDFEDISEHSSDVDVCIIGGGAAGISMAITLSKQGHRVLLCEGGDADYSERSQDSYRGETVGDAYIPLYGARLRYLGGSTNHWGGVCRPLDRYDFSAKTAASETAWPIGRDALAPYYRAAASMLDLTPTPADQPISGSGLKRIYFSL--GNPTRLKDKYAATLSESTTLACCLTANLVALKTQDGKVTSATFRNYQGDLRQVQAR-----YFVLACGGIDNSRLLLWCN--HQTQGQLIPQHDALGRYWMEHPHATVGK----ALLFNPAALGLDDEYNVFLSPTANTIASRQILNCGLRLHRMNPEATQELTDELAEQAPTLAGRLSTWQAQGQVIHGIVLRAAWEQEPHYDNRVELSDELDELGVPRSRLVWRQSELDRHTIRESMLVLG-EYLRANDL------GRLQLADWLAETPVQLPTDGELAGRHHMGGTRMSLNAEEGIVNP 433          
BLAST of mRNA_P-littoralis_Contig907.3.1 vs. uniprot
Match: A0A651D8Y1_HALSX (GMC family oxidoreductase n=1 Tax=Halomonas sp. TaxID=1486246 RepID=A0A651D8Y1_HALSX)

HSP 1 Score: 360 bits (923), Expect = 2.050e-116
Identity = 213/449 (47.44%), Postives = 269/449 (59.91%), Query Frame = 1
Query:    1 MYINFENINERSDAVDVCIIGGGAAGISMAITLSKQGHRVLLCEGGDADYSERSQDSYRGETVGDTYVPLYGARLRHLGGSTNHWGGVCRPLDRYDFTAKTATSETAWPIGRNALSPYYRAAASMLDLTPTPPTSRSRGRTKTHLFFAR*PNTPER*ICRLT*RVNHA*MLP----------DSQLGRAGNTRWQGYQRHVQKLSRQL*RCVHATLCWPAVALITLACCCGVINKRR--GN*FLSTKRWAAIGWSTLSRDGR*SAVFQSSSSRPGR*VQRVSLPTASTIASRQILNCGLRLHRMNAEATRELADELAEQAPTLAGRLSTWQAQGRVIHGAVLRAAWEQEPHFNNRVELSDERGCAG--RS-----P*PIGMATIRIGSSYHS*KHASARRIPSCT*PGPTAVG*LARRPPVQLPTDGELAGRHHMGARAWGLMQRKALL 1290
            MYI FE++NE SDAVDVCIIGGGAAGI+MA+TL++QG +VLLCEGGDADYSERSQDSYRGE VGD Y+PLYGARLRHLGGSTNHWGGVCRPLDRYDFT K A  ET WPIG +AL+PYYRAAASMLDLTPTP      G     ++F+     P R   +    +N +  L           ++Q GR  +  ++ YQ   +K+     R  +  L    +    L   C    + +   N     + W     +T+ +    + +F  ++            PTA +IASRQILNCGLRLHRMNAE T+EL DELA+ AP LAG+L TWQAQG+V+HGA+LRA+WEQEP + NR+ELS+E    G  RS        +   TIR        ++     +      G   +       PV+LPT+GELAGRHHMG     L   + ++
Sbjct:    1 MYIAFEDLNEDSDAVDVCIIGGGAAGIAMAVTLARQGRQVLLCEGGDADYSERSQDSYRGEVVGDAYIPLYGARLRHLGGSTNHWGGVCRPLDRYDFTQKPAAVETGWPIGHDALAPYYRAAASMLDLTPTPSDQPIPGAGLKRIYFSL--GNPTRLKDKYATTLNDSITLECCLTANLVALETQGGRVTSASFKNYQGDYRKV-----RARYFVLACGGIDNSRLLLWCNQQTQGQLIPNDATLGRYWMEHPHATVGK----ALLFNPAALGLDDDYNVFLSPTAQSIASRQILNCGLRLHRMNAEVTQELVDELAQLAPALAGQLYTWQAQGQVMHGAMLRASWEQEPRYENRIELSEELDDLGIPRSRLVWRQSELDRHTIRESMLLLG-EYLRDNDL------GRLQLADWLADTPVKLPTEGELAGRHHMGGTRMSLTAEEGIV 431          
BLAST of mRNA_P-littoralis_Contig907.3.1 vs. uniprot
Match: G4F213_9GAMM (GMC oxidoreductase n=3 Tax=Halomonas TaxID=2745 RepID=G4F213_9GAMM)

HSP 1 Score: 359 bits (921), Expect = 5.400e-116
Identity = 218/462 (47.19%), Postives = 271/462 (58.66%), Query Frame = 1
Query:    1 MYINFENINERSDAVDVCIIGGGAAGISMAITLSKQGHRVLLCEGGDADYSERSQDSYRGETVGDTYVPLYGARLRHLGGSTNHWGGVCRPLDRYDFTAKTATSETAWPIGRNALSPYYRAAASMLDLTPTPPTSRSRGRTKTHLFFAR*PNTPER*ICRLT*RVNHA*MLP----------DSQLGRAGNTRWQGYQRHVQKLSRQL*RCVHATLCWPAVALITLACCCGVINKR-------RGN*FLSTKR------WAAIGWSTLSRDGR*SAVFQSSSSRPGR*VQRVSLPTASTIASRQILNCGLRLHRMNAEATRELADELAEQAPTLAGRLSTWQAQGRVIHGAVLRAAWEQEPHFNNRVELSDERGCAG--RS-----P*PIGMATIRIGSSYHS*KHASARRIPSCT*PGPTAVG*LARRPPVQLPTDGELAGRHHMGARAWGLMQRKALLIP 1296
            MYI+FE I+E+ DAVDVCIIG GAAGISMA+TLS++GHRVLLCEGGDADYSERSQ+ YRGET+GD Y+PLYGARLRHLGGSTNHWGGVCRPLDRYDFTAK+A SETAWPIGR+ALSPYY +AA +LDL  TP      G     ++F+     P R   +    +  +  L           ++Q G   +  ++ YQ           R VHA           LAC  G+ N R       + N  L  +       W     +T+ +    + +F+ ++            PTA+++ SRQILNCGLRLHRMNAE T+ L DELA+QAPTLAGR+  WQAQG++IHG VLRAAWEQEP F NR+ELSDE    G  RS        +   TIR        ++     +      G   +       PVQLPT+GELAGRHHMG     L+    ++ P
Sbjct:    1 MYIDFEAISEQRDAVDVCIIGAGAAGISMAVTLSERGHRVLLCEGGDADYSERSQECYRGETIGDPYIPLYGARLRHLGGSTNHWGGVCRPLDRYDFTAKSAASETAWPIGRDALSPYYHSAAKLLDLATTPADQTIAGAGFKRIYFSL--GNPTRLKDKFAAMLRDSMTLECCLTANLVALETQDGHVTSATFKNYQGDY--------RLVHARY-------FVLACG-GIENSRLLLWCNQQANGQLIPQAGALGRYWMEHPHATVGK----ALLFKPAALGLDDEYNVFLSPTAASLDSRQILNCGLRLHRMNAETTQALIDELADQAPTLAGRIRIWQAQGQIIHGVVLRAAWEQEPRFENRIELSDELDDLGVPRSRLVWQQSELDRRTIRESMLLLG-EYLRDNEV------GRLQMADWLADTPVQLPTEGELAGRHHMGGTRMSLVAEAGIVNP 433          
BLAST of mRNA_P-littoralis_Contig907.3.1 vs. uniprot
Match: A0A1J8PWM7_9GAMM (GMC oxidoreductase n=12 Tax=Halomonas TaxID=2745 RepID=A0A1J8PWM7_9GAMM)

HSP 1 Score: 357 bits (916), Expect = 2.310e-115
Identity = 215/451 (47.67%), Postives = 270/451 (59.87%), Query Frame = 1
Query:    1 MYINFENINERSDAVDVCIIGGGAAGISMAITLSKQGHRVLLCEGGDADYSERSQDSYRGETVGDTYVPLYGARLRHLGGSTNHWGGVCRPLDRYDFTAKTATSETAWPIGRNALSPYYRAAASMLDLTPTP---PTSRSRGRTKTHLFFAR*PNTPER*ICRLT*RVNHA*MLP------DSQLGRAGNTRWQGYQRHVQKLSRQL*RCVHATLCWPAVALITLACCC-----GVINKRRGN*FLSTKRWAAIGWSTLSRDGR*SAVFQSSSSRPGR*VQRVSLPTASTIASRQILNCGLRLHRMNAEATRELADELAEQAPTLAGRLSTWQAQGRVIHGAVLRAAWEQEPHFNNRVELSDERGCAG--RS-----P*PIGMATIRIGSSYHS*KHASARRIPSCT*PGPTAVG*LARRPPVQLPTDGELAGRHHMGARAWGLMQRKALL 1290
            MYI FE+I+E S+AVDVCIIG GAAGISMA+TL+++GHRVLLCEGGDA+YSERSQD YRGE VGD Y+PLYGARLRHLGGSTNHWGG+CRPLDRYDFTAK A SETAWPIGR+AL+PYYR AAS+LDL  TP   P + S G  + +          E+    L+        L       +SQ G+     ++ YQ   +K+  +     +  L    +    L   C     G +  + G      + W     +T+ +    + +F+ ++            PTA +I+SRQILNCGLRLHRMNAEAT+EL DELA+QAPTLAGRL  WQAQGRVIHG  +RAAWEQEP F+NR+ELS+E    G  RS        +   TIR        ++     I      G   +       PV+LPT+GELAGRHHMG     L   + ++
Sbjct:    1 MYIAFEDISEHSEAVDVCIIGAGAAGISMAVTLAERGHRVLLCEGGDAEYSERSQDCYRGEVVGDPYIPLYGARLRHLGGSTNHWGGICRPLDRYDFTAKRAASETAWPIGRDALAPYYRIAASVLDLASTPADQPITNS-GLKRIYFSLGHPTRLKEKYATTLSESTTLECCLTANLVALESQDGKVTGATFKNYQGEYRKVQAR-----YFVLACGGIDNSRLLLWCNQQLNGQLIPQAGT---LGRYWMEHPHATVGK----ALLFEPAALGLDEVYNVFLSPTAHSISSRQILNCGLRLHRMNAEATQELIDELADQAPTLAGRLRVWQAQGRVIHGTAVRAAWEQEPRFDNRIELSEELDELGVPRSRLVWQQSELDRHTIRESMLLLG-EYLRDNEI------GRLQLADWLVDTPVKLPTEGELAGRHHMGGTRMSLNAEQGIV 431          
BLAST of mRNA_P-littoralis_Contig907.3.1 vs. uniprot
Match: UPI001EEFD763 (GMC oxidoreductase n=1 Tax=Halomonas profundi TaxID=2852117 RepID=UPI001EEFD763)

HSP 1 Score: 355 bits (912), Expect = 8.930e-115
Identity = 214/457 (46.83%), Postives = 269/457 (58.86%), Query Frame = 1
Query:    1 MYINFENINERSDAVDVCIIGGGAAGISMAITLSKQGHRVLLCEGGDADYSERSQDSYRGETVGDTYVPLYGARLRHLGGSTNHWGGVCRPLDRYDFTAKTATSETAWPIGRNALSPYYRAAASMLDLTPTPPTSRSRGRTKTHLFFAR*PNTPER*ICRLT*RVNHA*MLP-------------DSQLGRAGNTRWQGYQRHVQKLSRQL*RCVHATLCWPAVALITLACCCGVINKRRGN*FLST-----KRWAAIGWSTLSRDGR*SAVFQSSSSRPGR*VQRVSLPTASTIASRQILNCGLRLHRMNAEATRELADELAEQAPTLAGRLSTWQAQGRVIHGAVLRAAWEQEPHFNNRVELSDERGCAG--RS-----P*PIGMATIRIGSSYHS*KHASARRIPSCT*PGPTAVG*LARRPPVQLPTDGELAGRHHMGARAWGLMQRKALLIP 1296
            MYI+FE+I+E  D +DVCIIG GAAGISMA+TL+++GHRVLLCEGGDADYSERSQDSYRGETVGD Y+PLYGARLR+LGGSTNHWGG+CRPLDRYDFTAK+A+SET WPI R+A+SPYY  AAS+LDL PTP      G     ++F+     P R   +    ++ +  L              D ++  A    + G  R V        R  +  L    +    L   C   N++     +       + W     +T+ +    + +F+ ++            P A  IASRQILNCGLRLHRMNAEAT+ L DELAEQAPTLAGRL TWQAQGRV+HGAVLRAAWEQEP ++N +ELSD+    G  RS        +   TIR  S     ++     +      G   +       PVQLP+DGELAGRHHMG     L   + ++ P
Sbjct:    1 MYIDFEDISEHGDEIDVCIIGAGAAGISMAVTLAERGHRVLLCEGGDADYSERSQDSYRGETVGDPYIPLYGARLRYLGGSTNHWGGICRPLDRYDFTAKSASSETDWPIARDAISPYYSTAASILDLMPTPADQPIAGSGFKRIYFSL--GNPTRLKEKYAATLSESATLQCCLTANLVALETLDGEVTSATFKNYAGDSRQV--------RARYFVLACGGIENSRLLLWC---NQQANGQLIPQDATLGRYWMEHPHATVGK----ALMFEPAALGLEDEYNVFLSPDAQAIASRQILNCGLRLHRMNAEATQALVDELAEQAPTLAGRLHTWQAQGRVMHGAVLRAAWEQEPRYDNHIELSDDVDSLGVPRSRLVWQQSNLDRHTIRE-SMLMLGEYLRENDL------GRLQLADWLAETPVQLPSDGELAGRHHMGGTRMSLDAEQGIVNP 433          
BLAST of mRNA_P-littoralis_Contig907.3.1 vs. uniprot
Match: A0A365TSG0_9GAMM (GMC family oxidoreductase n=1 Tax=Halomonas sulfidaeris TaxID=115553 RepID=A0A365TSG0_9GAMM)

HSP 1 Score: 351 bits (900), Expect = 7.710e-113
Identity = 211/441 (47.85%), Postives = 260/441 (58.96%), Query Frame = 1
Query:    1 MYINFENINERSDAVDVCIIGGGAAGISMAITLSKQGHRVLLCEGGDADYSERSQDSYRGETVGDTYVPLYGARLRHLGGSTNHWGGVCRPLDRYDFTAKTATSETAWPIGRNALSPYYRAAASMLDLTPTPPTSRSRGRTKTHLFFAR*PNTPER*ICRLT*RVNHA*MLP----------DSQLGRAGNTRWQGYQRHVQKLSRQL*RCVHATLCWPAVALITLACCCGVINKRRGN*FLSTKR-WAAIGWSTLSRDGR*SAVFQSSSSRPGR*VQRVSLPTASTIASRQILNCGLRLHRMNAEATRELADELAEQAPTLAGRLSTWQAQGRVIHGAVLRAAWEQEPHFNNRVELSDERGCAG--RS-----P*PIGMATIRIGSSYHS*KHASARRIPSCT*PGPTAVG*LARRPPVQLPTDGELAGRHHMGARAWGL 1269
            MYI+F+ + E+ DAVD+CIIG GAAGISMA+TL+++GHRVLLCEGGDADYSERSQD YRGETVGD Y+PL GARLRHLGGSTNHWGGVCRPLDRYDFTAK A SETAWPIG +ALSPYY AAAS+LDL PTP      G     ++F+   + P R   +    +  +  L           ++Q G+  +  ++ YQ   +++  +         C        L  C    N R      +  R W     +T+ +    + +F+ +             PTA +I SRQILNCGLRLHRMN EAT+ L DELA QAP LAGRL  WQ QG+VIHG VLRAAWEQEPHF+NR+ELS+E    G  RS        +   TIR        ++     I      G   +       PV+LPT+GELAGRHHMG     L
Sbjct:    1 MYIDFKELIEQPDAVDICIIGAGAAGISMAVTLAERGHRVLLCEGGDADYSERSQDCYRGETVGDPYIPLDGARLRHLGGSTNHWGGVCRPLDRYDFTAKAAASETAWPIGHDALSPYYHAAASVLDLVPTPVDQSVAGSGFKRIYFSL--DNPARLKDKYAETLRKSTTLECCLTANLVALETQDGKVSSATFKNYQGDYRQVRARY----FVLACGGIENSRLLQWCNQQTNHRLIPQAAALGRYWMEHPHATVGK----ALLFKPALLGLNDEYNVFLSPTAHSIDSRQILNCGLRLHRMNVEATQALIDELAAQAPMLAGRLRIWQTQGQVIHGVVLRAAWEQEPHFDNRIELSEELDALGIPRSRLVWQQSDLDRHTIRESMLLLG-EYLRDNEI------GRLQMADWLADTPVKLPTEGELAGRHHMGGTRMSL 424          
BLAST of mRNA_P-littoralis_Contig907.3.1 vs. uniprot
Match: UPI001F0DC6D7 (FAD-dependent oxidoreductase n=1 Tax=Halomonas neptunia TaxID=115551 RepID=UPI001F0DC6D7)

HSP 1 Score: 350 bits (899), Expect = 8.270e-113
Identity = 213/459 (46.41%), Postives = 265/459 (57.73%), Query Frame = 1
Query:    1 MYINFENINERSDAVDVCIIGGGAAGISMAITLSKQGHRVLLCEGGDADYSERSQDSYRGETVGDTYVPLYGARLRHLGGSTNHWGGVCRPLDRYDFTAKTATSETAWPIGRNALSPYYRAAASMLDLTPTPPTSRSRGRTKTHLFFAR*PNTPER*ICRLT*RVNHA*MLPDSQL----------------GRAGNTRWQGYQRHVQKLSRQL*RCVHATLCWPAVALITLACCCGVINKRRGN*FLSTKR----WAAIGWSTLSRDGR*SAVFQSSSSRPGR*VQRVSLPTASTIASRQILNCGLRLHRMNAEATRELADELAEQAPTLAGRLSTWQAQGRVIHGAVLRAAWEQEPHFNNRVELSDERGCAG--RS-----P*PIGMATIRIGSSYHS*KHASARRIPSCT*PGPTAVG*LARRPPVQLPTDGELAGRHHMGARAWGLMQRKALLIP 1296
            MYI+F++I+E  DA DVCIIGGGAAGISMA+ L+++GH VLLCEGGDADYSERSQ  Y+G+ VGD Y+PLYGARLR+LGGSTNHWGGVCRPLDRYDF  KTA  ETAWPIGR+ L+PYY AA S+L L  TP            ++F+    T      R+  +  HA  L DS                  G+  +  ++ YQ   +++     R  +  L    +    L   C    + +G      K     W     +T+ +    + +F+ ++            PTA  IASRQILNCGLRLHRMNAEAT+EL DELA+QAPTLAGR+STWQAQGRVIHGAVLRAAWEQEP F+NR+ELSDE    G  RS        +   TIR        ++     +      G   +       PVQLPTDGELAGRHHMG     L   + ++ P
Sbjct:    1 MYIDFKDISEHQDAADVCIIGGGAAGISMAVNLAERGHSVLLCEGGDADYSERSQQCYQGDVVGDPYIPLYGARLRYLGGSTNHWGGVCRPLDRYDFPGKTAALETAWPIGRDTLAPYYSAAVSILGLETTPADQLIPNADFKRIYFSLGHPT------RM--KEKHAASLSDSTSLKCCLTANLAALETDNGKVTSATFKNYQGDYRQV-----RARYFVLACGGIENSRLLLWCN--QQAQGKLIPEDKTLGRYWMEHPHATVGK----ALLFEPAALGMDEVYNVFLSPTAHAIASRQILNCGLRLHRMNAEATQELIDELADQAPTLAGRISTWQAQGRVIHGAVLRAAWEQEPRFDNRIELSDELDELGVPRSRLLWQQSELDRRTIRQSMLLLG-EYLRDNEV------GRLQMADWLAETPVQLPTDGELAGRHHMGGTRMSLNAEEGIVNP 433          
BLAST of mRNA_P-littoralis_Contig907.3.1 vs. uniprot
Match: A0A0D6E5D1_9GAMM (Uncharacterized protein n=8 Tax=Halomonas TaxID=2745 RepID=A0A0D6E5D1_9GAMM)

HSP 1 Score: 347 bits (891), Expect = 1.310e-111
Identity = 212/460 (46.09%), Postives = 261/460 (56.74%), Query Frame = 1
Query:    1 MYINFENINERSDAVDVCIIGGGAAGISMAITLSKQGHRVLLCEGGDADYSERSQDSYRGETVGDTYVPLYGARLRHLGGSTNHWGGVCRPLDRYDFTAKTATSETAWPIGRNALSPYYRAAASMLDLTPTPPTSR--SRGRTKTHLFFAR*PNTPER*ICRLT*RVNHA*MLP------DSQLGRAGNTRWQGYQRHVQKLSRQL*RCVHATLCWPAVALITLACCCGVINKR---------RGN*FLST----KRWAAIGWSTLSRDGR*SAVFQSSSSRPGR*VQRVSLPTASTIASRQILNCGLRLHRMNAEATRELADELAEQAPTLAGRLSTWQAQGRVIHGAVLRAAWEQEPHFNNRVELSDERGCAGRSP*PIGMATIRIGSSYHS*KHASARRIPSCT*PGP----TAVG*LARRP-----PVQLPTDGELAGRHHMGARAWGLMQRKALL 1290
            MYI FE+I+E SDA DVCIIG GAAGISMA+TL+ +GHRVLLCEGGDADYSERSQ+ Y+G+ VGD Y+PLYGARLRHLGGSTN WGG+CRPLDRYDF AK A SETAWPIGRNAL+PYY AA +ML L PT         G  + +          E+    L+  V     L       ++  G+  +  ++ Y+   +K+                 A   +  C G+ N R          G          + W     +T+ +    + +F+ ++            PTA  I +RQILNCGLRLHRMNAEAT+EL DELA+QAPTLAGRL  WQAQGRVIHGAVLRAAWEQEP ++NR+ELSDE          +G+   R+          + R   S    G       VG L   P     PVQLPTDGELAGRHHMG     L   + ++
Sbjct:    1 MYIAFEDISEHSDAWDVCIIGAGAAGISMAVTLADRGHRVLLCEGGDADYSERSQECYQGDVVGDPYIPLYGARLRHLGGSTNXWGGICRPLDRYDFNAKAAASETAWPIGRNALAPYYSAAVNMLGLEPTLADHLIPEAGLKRIYFSLGHPTRMKEKYAATLSDSVTLECCLTANLVALETLAGKVTSATFRNYRGDYRKVQ----------------ARYFILACGGIDNSRLLQWCNQQLNGQLIPQADTLGRYWMEHPHATVGK----ALLFEPAALGLDDEYNVFLSPTADAINARQILNCGLRLHRMNAEATQELIDELADQAPTLAGRLRVWQAQGRVIHGAVLRAAWEQEPRYDNRIELSDELD-------KLGVPRSRLVWRQSELDRRTIRE--SMLLLGEYLRDNEVGRLQMAPWLADTPVQLPTDGELAGRHHMGGTRMSLNAEEGIV 431          
BLAST of mRNA_P-littoralis_Contig907.3.1 vs. uniprot
Match: A0A1A9R5Q4_9GAMM (GMC oxidoreductase n=3 Tax=Halomonas TaxID=2745 RepID=A0A1A9R5Q4_9GAMM)

HSP 1 Score: 347 bits (890), Expect = 1.860e-111
Identity = 210/458 (45.85%), Postives = 264/458 (57.64%), Query Frame = 1
Query:    1 MYINFENINERSDAVDVCIIGGGAAGISMAITLSKQGHRVLLCEGGDADYSERSQDSYRGETVGDTYVPLYGARLRHLGGSTNHWGGVCRPLDRYDFTAKTATSETAWPIGRNALSPYYRAAASMLDLTPTPPTSRSRGRTKTHLFFAR*PNTPER*ICRLT*RVNHA*MLPDSQL----------------GRAGNTRWQGYQRHVQKLSRQL*RCVHATLCWPAVALITLACCCGVINKRRGN*FLST-----KRWAAIGWSTLSRDGR*SAVFQSSSSRPGR*VQRVSLPTASTIASRQILNCGLRLHRMNAEATRELADELAEQAPTLAGRLSTWQAQGRVIHGAVLRAAWEQEPHFNNRVELSDERGCAG--RS-----P*PIGMATIRIGSSYHS*KHASARRIPSCT*PGPTAVG*LARRPPVQLPTDGELAGRHHMGARAWGLMQRKALL 1290
            MYI+F++I+E +D+ DVCIIG GAAGISMA+TL+ +GHRVLLCEGGDADYSERSQ+ Y+GE VGD Y+PLYGARLRHLGGSTNHWGG+CRPLDRYDF AK A SETAWPIGR+AL+PYY AA + L L PTP            ++F+    T      R+  +  HA  L DS                  G   N  +  YQ   +K+  +     +  L    +    L   C   N++     +       + W     +T+ +    + +F+ ++            PTA  I +RQILNCGLRLHRMN EAT+ELADELA+QAPTLAGRL  WQAQGRVIHGAV+RAAWEQEP ++NR+ELSDE    G  RS        +   TIR        ++     +      G   +       PVQLPTDGELAGRHHMG     L   + ++
Sbjct:    1 MYIDFKDISEHTDSWDVCIIGAGAAGISMAVTLAGRGHRVLLCEGGDADYSERSQECYKGEVVGDPYIPLYGARLRHLGGSTNHWGGICRPLDRYDFNAKAAASETAWPIGRDALAPYYSAAVNTLGLEPTPDDHLIPDAGLKRIYFSLGHPT------RM--KEKHAATLSDSTTLECCLTANLVALETHDGAVTNATFSNYQGDYRKVQAR-----YFVLACGGIENSRLLLWC---NQQLNGQLIPQADTLGRYWMEHPHATVGK----ALLFEPAALGLDDEYNVFLSPTADAINARQILNCGLRLHRMNPEATQELADELADQAPTLAGRLRVWQAQGRVIHGAVVRAAWEQEPRYDNRIELSDELDKLGVPRSRLVWRQSELDRRTIRESMLLLG-EYLRDNEV------GRLQLADWLADTPVQLPTDGELAGRHHMGGTRMSLNAEEGIV 431          
BLAST of mRNA_P-littoralis_Contig907.3.1 vs. uniprot
Match: A0A0P7ZBB9_9GAMM (Oxidoreductase n=1 Tax=Halomonas sp. HL-48 TaxID=1479235 RepID=A0A0P7ZBB9_9GAMM)

HSP 1 Score: 322 bits (824), Expect = 1.340e-101
Identity = 201/437 (46.00%), Postives = 242/437 (55.38%), Query Frame = 1
Query:    1 MYINFENINERSDAVDVCIIGGGAAGISMAITLSKQGHRVLLCEGGDADYSERSQDSYRGETVGDTYVPLYGARLRHLGGSTNHWGGVCRPLDRYDFTAKTATSETAWPIGRNALSPYYRAAASMLDLTPTPPTSRSRGRTKTHLFFAR*P------------NTPER*ICRLT*RVNHA*MLPDSQLGRAGNTRWQGYQRHVQKLSRQL*RCVHATLCWPAV-ALITLACCCGVINKRRGN*FLSTKRWAAIGWSTLSRDGR*SAVFQSSSSRPGR*VQRVSLPTASTIASRQILNCGLRLHRMNAEATRELADELAEQAPTLAGRLSTWQAQGRVIHGAVLRAAWEQEPHFNNRVELSDERGCAGRSP*PIGMATIRIGSSYHS*KHASARRIPSC-------T*PGPTAVG*LARRPPVQLPTDGELAGRHHMG 1251
            MY  FE I+E   AVDVCIIGGGAAGI+MA+TL+ QGH +LLCEGGDADYSERSQDSYRG+ VGD Y PL   RLRHLGGSTNHWGG+CRPLD YDF AK A SETAWPI    LSPY  AA  +LDLT  PP            +F+  P            +   R  C LT  +    +  D+  G+     ++ Y+      SRQ+  C     C     A + L C      K         + W     +T+ R    + +F+ ++    +       P A  I SRQILNCGLRLHRMN E T++L DELA QAPTLAGRLSTWQAQGRV+HGA+LRAAWEQEP   NR+ELSDER         +G+   R+          + R            +  G   +       PVQLP +GELAGRHHMG
Sbjct:    1 MYRAFETISE---AVDVCIIGGGAAGIAMAVTLADQGHHILLCEGGDADYSERSQDSYRGDLVGDPYHPLETTRLRHLGGSTNHWGGICRPLDDYDFDAKPAASETAWPIEHATLSPYLPAAMRLLDLTSVPPDEPIDDAPFKRTYFSLGPAIRLKDKYATTLSESTRLECCLTANL----VALDTASGQVRRATFRNYRGD----SRQVTACYFVLACGGIDNARLLLWCNQQAQGKLIPKDATLGRYWMEHPHATVGR----ALLFEPAALGLDKDHTVFLSPEAPAINSRQILNCGLRLHRMNTEVTQQLIDELANQAPTLAGRLSTWQAQGRVMHGALLRAAWEQEPRHENRIELSDERDA-------LGIPRTRLVWRQSELDRRTIRESMLLFGEYLRDSDVGRLQLADWLADTPVQLPAEGELAGRHHMG 415          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig907.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0F9YX66_9ZZZZ1.090e-12851.21Uncharacterized protein n=1 Tax=marine sediment me... [more]
A0A651D8Y1_HALSX2.050e-11647.44GMC family oxidoreductase n=1 Tax=Halomonas sp. Ta... [more]
G4F213_9GAMM5.400e-11647.19GMC oxidoreductase n=3 Tax=Halomonas TaxID=2745 Re... [more]
A0A1J8PWM7_9GAMM2.310e-11547.67GMC oxidoreductase n=12 Tax=Halomonas TaxID=2745 R... [more]
UPI001EEFD7638.930e-11546.83GMC oxidoreductase n=1 Tax=Halomonas profundi TaxI... [more]
A0A365TSG0_9GAMM7.710e-11347.85GMC family oxidoreductase n=1 Tax=Halomonas sulfid... [more]
UPI001F0DC6D78.270e-11346.41FAD-dependent oxidoreductase n=1 Tax=Halomonas nep... [more]
A0A0D6E5D1_9GAMM1.310e-11146.09Uncharacterized protein n=8 Tax=Halomonas TaxID=27... [more]
A0A1A9R5Q4_9GAMM1.860e-11145.85GMC oxidoreductase n=3 Tax=Halomonas TaxID=2745 Re... [more]
A0A0P7ZBB9_9GAMM1.340e-10146.00Oxidoreductase n=1 Tax=Halomonas sp. HL-48 TaxID=1... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig907contigP-littoralis_Contig907:940..2396 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1380358.JADJ01000017_gene1601
PFAMsDAO,FAD_binding_2,FAD_binding_3,GMC_oxred_C,Pyr_redox_2
Model size1457
Max annot lvl1236|Gammaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue9.8e-76
EggNOG OGsCOG2303@1|root,COG2303@2|Bacteria,1MXUT@1224|Proteobacteria,1S03P@1236|Gammaproteobacteria
Description(GMC) oxidoreductase
Cds size450
COG categoryE
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791812.9588368-UTR-P-littoralis_Contig907:939..19461680791812.9588368-UTR-P-littoralis_Contig907:939..1946Pylaiella littoralis U1_48UTRP-littoralis_Contig907 940..1946 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791812.973845-CDS-P-littoralis_Contig907:1946..23961680791812.973845-CDS-P-littoralis_Contig907:1946..2396Pylaiella littoralis U1_48CDSP-littoralis_Contig907 1947..2396 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig907.3.1prot_P-littoralis_Contig907.3.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig907 1947..2396 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig907.3.1

>prot_P-littoralis_Contig907.3.1 ID=prot_P-littoralis_Contig907.3.1|Name=mRNA_P-littoralis_Contig907.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=150bp
MYINFENINERSDAVDVCIIGGGAAGISMAITLSKQGHRVLLCEGGDADY
SERSQDSYRGETVGDTYVPLYGARLRHLGGSTNHWGGVCRPLDRYDFTAK
TATSETAWPIGRNALSPYYRAAASMLDLTPTPPTSRSRGRTKTHLFFAR*
back to top

mRNA from alignment at P-littoralis_Contig907:940..2396-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig907.3.1 ID=mRNA_P-littoralis_Contig907.3.1|Name=mRNA_P-littoralis_Contig907.3.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1457bp|location=Sequence derived from alignment at P-littoralis_Contig907:940..2396- (Pylaiella littoralis U1_48)
ATGTATATCAATTTCGAGAATATCAACGAACGTAGCGATGCGGTGGATGT TTGCATTATTGGCGGTGGCGCTGCGGGCATTTCAATGGCGATTACATTGA GCAAGCAGGGCCACCGCGTGCTGCTCTGCGAGGGTGGAGACGCTGACTAC AGTGAACGATCCCAAGACAGCTACCGAGGCGAAACTGTCGGTGATACCTA TGTTCCTCTTTATGGTGCTCGCCTGCGCCATTTAGGCGGGTCGACCAACC ACTGGGGAGGTGTTTGCCGCCCTTTGGACCGTTACGACTTTACCGCAAAA ACAGCCACCAGCGAGACAGCTTGGCCAATCGGTCGTAACGCCTTATCACC ATACTACCGTGCAGCCGCGAGCATGCTCGACTTGACGCCCACCCCGCCGA CCAGCCGATCCCGGGGCAGGACTAAAACGCATCTATTTTTCGCTAGGTAA CCCAACACGCCTGAAAGATAAATATGCCGCCTCACTTAGCGAGTCAACCA CGCTTGAATGCTGCCTGACAGCCAACTTGGTCGCGCTGGAAACACAAGAT GGCAAGGTTACCAGCGCCACGTTCAGAAACTATCAAGGCAATTATAGCGG TGCGTGCACGCTACTTTGTGCTGGCCTGCGGTGGCATTGATAACTCTCGC TTGCTGCTGTGGTGTAATCAACAAACGCAGGGGCAACTAATTCCTCAGCA CAAAACGCTGGGCCGCTATTGGATGGAGCACCCTCTCACGCGACGGTAGG TAAAGCGCTGTTTTTCAATCCAGCAGCTCTCGGCCTGGAAGATGAGTACA ACGTGTTTCTCTCCCCACGGCTAGCACTATCGCCTCACGTCAAATACTTA ACTGCGGGCTGCGCTTGCACCGCATGAACGCGGAGGCCACTCGAGAACTG GCTGATGAACTCGCCGAGCAAGCACCGACACTGGCTGGGCGGCTGAGCAC TTGGCAAGCACAAGGCCGTGTTATTCACGGCGCAGTACTGAGGGCTGCCT GGGAGCAAGAGCCCCATTTTAACAATCGCGTCGAGTTGAGCGATGAGCGG GGATGCGCTGGGCGTTCCCCGTAGCCGATTGGTATGGCGACAATCCGAAT TGGATCGTCATACCATTCGTGAAAGCATGCTAGTGCTCGGCGAATACCTT CGTGCACATGACCTGGGCCGACTGCAGTTGGCTGACTGGCTCGTCGTCCC CCTGTACAATTACCCACTGATGGCGAGCTTGCAGGCCGCCACCACATGGG GGCACGCGCATGGGGCTTAATGCAGAGGAAGGCATTGTTAATTCCGACTG CCGCTTATTTGCTCAGGATAACGTCTATGTAGCGGGCTCCAGCGTGTTTT CCAGCGGAGGCCACGCCAACCCCACCTTGACCCTGGTGCAGCTGGCTCTG CGTCTCTGTGACCACCTGGGGAGCCGGTTAGCGCAAGGTGACCAGACCAC GACTGTC
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig907:940..2396-

>mRNA_P-littoralis_Contig907.3.1 ID=mRNA_P-littoralis_Contig907.3.1|Name=mRNA_P-littoralis_Contig907.3.1|organism=Pylaiella littoralis U1_48|type=CDS|length=450bp|location=Sequence derived from alignment at P-littoralis_Contig907:940..2396- (Pylaiella littoralis U1_48)
ATGTATATCAATTTCGAGAATATCAACGAACGTAGCGATGCGGTGGATGT
TTGCATTATTGGCGGTGGCGCTGCGGGCATTTCAATGGCGATTACATTGA
GCAAGCAGGGCCACCGCGTGCTGCTCTGCGAGGGTGGAGACGCTGACTAC
AGTGAACGATCCCAAGACAGCTACCGAGGCGAAACTGTCGGTGATACCTA
TGTTCCTCTTTATGGTGCTCGCCTGCGCCATTTAGGCGGGTCGACCAACC
ACTGGGGAGGTGTTTGCCGCCCTTTGGACCGTTACGACTTTACCGCAAAA
ACAGCCACCAGCGAGACAGCTTGGCCAATCGGTCGTAACGCCTTATCACC
ATACTACCGTGCAGCCGCGAGCATGCTCGACTTGACGCCCACCCCGCCGA
CCAGCCGATCCCGGGGCAGGACTAAAACGCATCTATTTTTCGCTAGGTAA
back to top