prot_P-littoralis_Contig907.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig907.1.1
Unique Name	prot_P-littoralis_Contig907.1.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	121

Homology

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BLAST of mRNA_P-littoralis_Contig907.1.1 vs. uniprot
Match: A0A1R4I5W2_9GAMM (Ribosomal RNA small subunit methyltransferase A n=11 Tax=Halomonadaceae TaxID=28256 RepID=A0A1R4I5W2_9GAMM)

HSP 1 Score: 176 bits (447), Expect = 5.030e-53
Identity = 88/107 (82.24%), Postives = 90/107 (84.11%), Query Frame = 0

Query:    1 MHFMLQKEVVERLAAEHGGTDWGRLSVMAQYYCHVEQLFIVPPEAFVPRPKVDSAIVRLTPHEKLPHVADDPALLFELVKLAFGQRRKRCAITLKGVCEPRNSGKLG 107
            MHFMLQKEVVERLAA+ GGTDWGRLSVMAQYYCHV+QLFIVPPEAFVPRPKVDSAIVRLTPH  LPHVADDPALLFELVKLAFGQRRK      KG   P     LG
Sbjct:  134 MHFMLQKEVVERLAAQPGGTDWGRLSVMAQYYCHVDQLFIVPPEAFVPRPKVDSAIVRLTPHASLPHVADDPALLFELVKLAFGQRRKTLRNNFKGRVSPETLEALG 240

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BLAST of mRNA_P-littoralis_Contig907.1.1 vs. uniprot
Match: H0J4F2_9GAMM (Ribosomal RNA small subunit methyltransferase A n=41 Tax=Halomonadaceae TaxID=28256 RepID=H0J4F2_9GAMM)

HSP 1 Score: 174 bits (441), Expect = 3.940e-52
Identity = 85/96 (88.54%), Postives = 88/96 (91.67%), Query Frame = 0

Query:    1 MHFMLQKEVVERLAAEHGGTDWGRLSVMAQYYCHVEQLFIVPPEAFVPRPKVDSAIVRLTPHEKLPHVADDPALLFELVKLAFGQRRKRCAITLKG 96
            MHFMLQKEVVERLAAE G TDWGRLSVMAQYYCHV+QLFIVPPEAFVPRPKVDSAIVRLTPH++LPH ADDPALLFELVKLAFGQRRK     LKG
Sbjct:  134 MHFMLQKEVVERLAAEPGSTDWGRLSVMAQYYCHVDQLFIVPPEAFVPRPKVDSAIVRLTPHDRLPHTADDPALLFELVKLAFGQRRKTLRNNLKG 229

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BLAST of mRNA_P-littoralis_Contig907.1.1 vs. uniprot
Match: A0A0P8BD60_9GAMM (Ribosomal RNA small subunit methyltransferase A n=9 Tax=Halomonas TaxID=2745 RepID=A0A0P8BD60_9GAMM)

HSP 1 Score: 167 bits (423), Expect = 1.840e-49
Identity = 84/96 (87.50%), Postives = 84/96 (87.50%), Query Frame = 0

Query:    1 MHFMLQKEVVERLAAEHGGTDWGRLSVMAQYYCHVEQLFIVPPEAFVPRPKVDSAIVRLTPHEKLPHVADDPALLFELVKLAFGQRRKRCAITLKG 96
            MHFMLQKEVVERLAAE GG DWGRLSVMAQYYC VEQLFIVPPEAFVPRP VDSAIVRLTPH  LPH ADDPALLFELVKLAFGQRRK     LKG
Sbjct:  134 MHFMLQKEVVERLAAEPGGPDWGRLSVMAQYYCQVEQLFIVPPEAFVPRPSVDSAIVRLTPHAALPHPADDPALLFELVKLAFGQRRKTLRNNLKG 229

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BLAST of mRNA_P-littoralis_Contig907.1.1 vs. uniprot
Match: A0A0D5M0N2_9GAMM (Ribosomal RNA small subunit methyltransferase A n=30 Tax=root TaxID=1 RepID=A0A0D5M0N2_9GAMM)

HSP 1 Score: 165 bits (417), Expect = 1.650e-48
Identity = 83/107 (77.57%), Postives = 87/107 (81.31%), Query Frame = 0

Query:    1 MHFMLQKEVVERLAAEHGGTDWGRLSVMAQYYCHVEQLFIVPPEAFVPRPKVDSAIVRLTPHEKLPHVADDPALLFELVKLAFGQRRKRCAITLKGVCEPRNSGKLG 107
            MHFMLQKEVVERLAAE GG DWGRLSVMAQYYC VEQLFIVPPEAFVP+PKV+SAIVRLTPH  LPH A+DP LLFELVKLAFGQRRK      KG   P    +LG
Sbjct:  133 MHFMLQKEVVERLAAEPGGADWGRLSVMAQYYCSVEQLFIVPPEAFVPQPKVESAIVRLTPHATLPHTAEDPTLLFELVKLAFGQRRKTLRNNFKGRVSPEILEELG 239

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BLAST of mRNA_P-littoralis_Contig907.1.1 vs. uniprot
Match: UPI001D0AC5D7 (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA n=1 Tax=Halomonas malpeensis TaxID=1172368 RepID=UPI001D0AC5D7)

HSP 1 Score: 160 bits (406), Expect = 7.730e-47
Identity = 81/96 (84.38%), Postives = 84/96 (87.50%), Query Frame = 0

Query:    1 MHFMLQKEVVERLAAEHGGTDWGRLSVMAQYYCHVEQLFIVPPEAFVPRPKVDSAIVRLTPHEKLPHVADDPALLFELVKLAFGQRRKRCAITLKG 96
            MHFMLQKEVVERLAAE GGTD+GR +VMAQYYC VEQLFIVPPEAFVPRPKVDSAIVRLTP + LPH A DPALLFELVKLAFGQRRK     LKG
Sbjct:  134 MHFMLQKEVVERLAAEPGGTDYGRFTVMAQYYCQVEQLFIVPPEAFVPRPKVDSAIVRLTPFDTLPHPASDPALLFELVKLAFGQRRKTLRNNLKG 229

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BLAST of mRNA_P-littoralis_Contig907.1.1 vs. uniprot
Match: A0A1M7FZM9_9GAMM (Ribosomal RNA small subunit methyltransferase A n=1 Tax=Halomonas subglaciescola TaxID=29571 RepID=A0A1M7FZM9_9GAMM)

HSP 1 Score: 160 bits (405), Expect = 1.070e-46
Identity = 79/96 (82.29%), Postives = 83/96 (86.46%), Query Frame = 0

Query:    1 MHFMLQKEVVERLAAEHGGTDWGRLSVMAQYYCHVEQLFIVPPEAFVPRPKVDSAIVRLTPHEKLPHVADDPALLFELVKLAFGQRRKRCAITLKG 96
            MHFMLQKEVVER+AAE GG+DWGRLSVMAQYYC VEQLF VPPEAFVP P V+SAIVRLTPH +LPHVADDP LLFELVK AFGQRRK     LKG
Sbjct:  133 MHFMLQKEVVERMAAEPGGSDWGRLSVMAQYYCQVEQLFTVPPEAFVPSPAVESAIVRLTPHAELPHVADDPTLLFELVKQAFGQRRKTLRNNLKG 228

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BLAST of mRNA_P-littoralis_Contig907.1.1 vs. uniprot
Match: A0A7X4JY14_9GAMM (Ribosomal RNA small subunit methyltransferase A n=3 Tax=Halomonas TaxID=2745 RepID=A0A7X4JY14_9GAMM)

HSP 1 Score: 160 bits (404), Expect = 1.350e-46
Identity = 81/96 (84.38%), Postives = 82/96 (85.42%), Query Frame = 0

Query:    1 MHFMLQKEVVERLAAEHGGTDWGRLSVMAQYYCHVEQLFIVPPEAFVPRPKVDSAIVRLTPHEKLPHVADDPALLFELVKLAFGQRRKRCAITLKG 96
            MHFMLQKEVVERLAAE GG DWGRLSVMAQYYC VEQLFIVPPEAFVPRPKVDSAIVRLTPH +LPH A D ALLF LVK AFGQRRK     LKG
Sbjct:  133 MHFMLQKEVVERLAAEPGGADWGRLSVMAQYYCQVEQLFIVPPEAFVPRPKVDSAIVRLTPHAELPHRAHDTALLFSLVKQAFGQRRKTLRNNLKG 228

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BLAST of mRNA_P-littoralis_Contig907.1.1 vs. uniprot
Match: A0A7Y3TXC7_9GAMM (Ribosomal RNA small subunit methyltransferase A n=2 Tax=Halomonas TaxID=2745 RepID=A0A7Y3TXC7_9GAMM)

HSP 1 Score: 159 bits (403), Expect = 1.970e-46
Identity = 79/96 (82.29%), Postives = 82/96 (85.42%), Query Frame = 0

Query:    1 MHFMLQKEVVERLAAEHGGTDWGRLSVMAQYYCHVEQLFIVPPEAFVPRPKVDSAIVRLTPHEKLPHVADDPALLFELVKLAFGQRRKRCAITLKG 96
            MHFMLQKEVVERLAAE GG DWGRLSVMAQYYC VEQLFIVPPEAFVPRPKVDSAIVRLTPH ++PH ADD  LLF LVK+AFGQRRK      KG
Sbjct:  133 MHFMLQKEVVERLAAEPGGPDWGRLSVMAQYYCQVEQLFIVPPEAFVPRPKVDSAIVRLTPHAQIPHPADDTELLFALVKMAFGQRRKTLRNNFKG 228

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BLAST of mRNA_P-littoralis_Contig907.1.1 vs. uniprot
Match: A0A3T1DVK7_9GAMM (rADc domain-containing protein n=1 Tax=Halomonas olivaria TaxID=390919 RepID=A0A3T1DVK7_9GAMM)

HSP 1 Score: 154 bits (388), Expect = 6.550e-46
Identity = 76/88 (86.36%), Postives = 78/88 (88.64%), Query Frame = 0

Query:    9 VVERLAAEHGGTDWGRLSVMAQYYCHVEQLFIVPPEAFVPRPKVDSAIVRLTPHEKLPHVADDPALLFELVKLAFGQRRKRCAITLKG 96
            +VERLAAE GGTDWGRLSVMAQYYC VEQLFIVPPEAFVPRPKVDSAIVRLTPHE LPH A+DPALLFELVKLAFGQRRK      KG
Sbjct:    1 MVERLAAEPGGTDWGRLSVMAQYYCQVEQLFIVPPEAFVPRPKVDSAIVRLTPHETLPHTAEDPALLFELVKLAFGQRRKTLRNNFKG 88

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BLAST of mRNA_P-littoralis_Contig907.1.1 vs. uniprot
Match: UPI00034A77CE (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA n=1 Tax=Halomonas jeotgali TaxID=553386 RepID=UPI00034A77CE)

HSP 1 Score: 155 bits (393), Expect = 6.840e-45
Identity = 79/96 (82.29%), Postives = 81/96 (84.38%), Query Frame = 0

Query:    1 MHFMLQKEVVERLAAEHGGTDWGRLSVMAQYYCHVEQLFIVPPEAFVPRPKVDSAIVRLTPHEKLPHVADDPALLFELVKLAFGQRRKRCAITLKG 96
            MHFMLQKEVVERL+AE GG DWGRLSVMAQYYC VEQLF VPPEAFVPRP VDSAIVRL PH KLP  ADDPALLF+LVK AFGQRRK     LKG
Sbjct:  133 MHFMLQKEVVERLSAEPGGKDWGRLSVMAQYYCRVEQLFNVPPEAFVPRPAVDSAIVRLAPHAKLPCPADDPALLFDLVKQAFGQRRKTLRNNLKG 228

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig907.1.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig907.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A1R4I5W2_9GAMM	5.030e-53	82.24	Ribosomal RNA small subunit methyltransferase A n=...	[more]
H0J4F2_9GAMM	3.940e-52	88.54	Ribosomal RNA small subunit methyltransferase A n=...	[more]
A0A0P8BD60_9GAMM	1.840e-49	87.50	Ribosomal RNA small subunit methyltransferase A n=...	[more]
A0A0D5M0N2_9GAMM	1.650e-48	77.57	Ribosomal RNA small subunit methyltransferase A n=...	[more]
UPI001D0AC5D7	7.730e-47	84.38	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- ...	[more]
A0A1M7FZM9_9GAMM	1.070e-46	82.29	Ribosomal RNA small subunit methyltransferase A n=...	[more]
A0A7X4JY14_9GAMM	1.350e-46	84.38	Ribosomal RNA small subunit methyltransferase A n=...	[more]
A0A7Y3TXC7_9GAMM	1.970e-46	82.29	Ribosomal RNA small subunit methyltransferase A n=...	[more]
A0A3T1DVK7_9GAMM	6.550e-46	86.36	rADc domain-containing protein n=1 Tax=Halomonas o...	[more]
UPI00034A77CE	6.840e-45	82.29	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020598	Ribosomal RNA adenine methylase transferase, N-terminal	SMART	SM00650	rADcneu6	coord: 1..63 e-value: 4.4E-5 score: -13.9
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase superfamily	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 1..66 e-value: 6.1E-24 score: 86.4
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase superfamily	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 1..99
IPR001737	Ribosomal RNA adenine methyltransferase KsgA/Erm	PFAM	PF00398	RrnaAD	coord: 1..92 e-value: 5.1E-22 score: 78.2
IPR001737	Ribosomal RNA adenine methyltransferase KsgA/Erm	PANTHER	PTHR11727	DIMETHYLADENOSINE TRANSFERASE	coord: 1..92
IPR001737	Ribosomal RNA adenine methyltransferase KsgA/Erm	PROSITE	PS51689	SAM_RNA_A_N6_MT	coord: 1..120 score: 35.534016
IPR023165	rRNA adenine dimethylase-like, C-terminal	GENE3D	1.10.8.100		coord: 67..114 e-value: 1.6E-5 score: 26.7

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig907	contig	P-littoralis_Contig907:136..498 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig907.1.1	mRNA_P-littoralis_Contig907.1.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig907 1..553 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig907.1.1 ID=prot_P-littoralis_Contig907.1.1|Name=mRNA_P-littoralis_Contig907.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=121bp
MHFMLQKEVVERLAAEHGGTDWGRLSVMAQYYCHVEQLFIVPPEAFVPRP
KVDSAIVRLTPHEKLPHVADDPALLFELVKLAFGQRRKRCAITLKGVCEP
RNSGKLGYRSSSPSTNVERG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR020598	rRNA_Ade_methylase_Trfase_N
IPR029063	SAM-dependent_MTases_sf
IPR001737	KsgA/Erm
IPR023165	rRNA_Ade_diMease-like_C