mRNA_P-littoralis_Contig905.6.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig905.6.1 vs. uniprot
Match: D8LDP0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDP0_ECTSI) HSP 1 Score: 232 bits (592), Expect = 3.660e-75 Identity = 123/202 (60.89%), Postives = 132/202 (65.35%), Query Frame = 1
Query: 49 EIRDSSNPFFTTTNSRIGTSVGRSHEFDAPPVFRKVPKVDPVAAGVDWKFMYTRESDRIGTGVPPSDSKLGAVVGRRESLGQRAREKGLGKHPVMYEREEETGVPLRDATCFELKSRVPEDKDARDALLKSFKHAAKEENPLYSTSNNDIGIKRPTGATFTFERRARQQGFSNSFNGLKFRDMGLNTNVTRSNIHDALNPQF 654
+IRDSSNPFFTTTNSRIG S + HE+DAPPVFRKVPKVD VAAG+DW FMYTR +RVPEDKDARD LLK+FKH +K+ENPLYST+NNDIGIKRPTGATFTFERRARQQGFSNSFNGLKFRDMGLNTNVTRSNIHD LNPQF
Sbjct: 4 QIRDSSNPFFTTTNSRIGNSACQKHEYDAPPVFRKVPKVDRVAAGIDWSFMYTR-------------------------------------------------------------NRVPEDKDARDELLKNFKHTSKKENPLYSTTNNDIGIKRPTGATFTFERRARQQGFSNSFNGLKFRDMGLNTNVTRSNIHDDLNPQF 144
BLAST of mRNA_P-littoralis_Contig905.6.1 vs. uniprot
Match: A0A7S1UKY3_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UKY3_9STRA) HSP 1 Score: 156 bits (395), Expect = 1.720e-44 Identity = 90/204 (44.12%), Postives = 125/204 (61.27%), Query Frame = 1
Query: 22 MAQRGRGCLEIRDSSNPFFTTTNSRIGTSVGRS-HEFDAPPVFRKVPKVDPVAAGVDWKFMYTRESDRIGTGVPPSDSKLGAVVGRRESLGQRAREKGLGKHPVMYEREEETGVPLRDATCFELKSRVPEDKDARDALLKSFKHAAKEENPLYSTSNNDIGIKRPTGATFTFERRARQQGFSNSFNGLKFRDMGLNTNVTRSNI 630
MA RGRG LEIRDS NPFF TT S IG+S+ ++ E DAP V R K G D+ F+Y S IG G+ SDSKL + R E G A ++G G +P+ +E + D +V +++ ++LL S++HA K E+ LY T++NDIG+K+P+ AT+ ER +RQQ FSNSFNG+ +RD GLNT++ +S I
Sbjct: 1 MAYRGRGTLEIRDSRNPFFHTTTSDIGSSIVKAGREVDAPAVPRPAMKQTLREQGYDFSFLYKPASAEIGKGIGMSDSKLSESMRREEPKGDIAFQRGRGLNPISPG--DEMTLATVDPDGLASMKQVGKEEVNVNSLLNSYRHAPKPEHALYPTTSNDIGLKKPSKATYVLERHSRQQRFSNSFNGILYRDQGLNTSMHKSKI 202
BLAST of mRNA_P-littoralis_Contig905.6.1 vs. uniprot
Match: A0A8J2SKS3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SKS3_9STRA) HSP 1 Score: 143 bits (360), Expect = 2.450e-39 Identity = 84/207 (40.58%), Postives = 116/207 (56.04%), Query Frame = 1
Query: 22 MAQRGRGCLEIRDSSNPFFTTTNSRIGTSVGRSHEFDAPPVFRKVPKVDPVAAGVDWKFMYTRESDRIGTGVPPSDSKLGAVVGRRESLGQRAREKGLGKHPVMYEREEETGVPLRDATCFELKSRVPEDKDARDALLKSFKHAAKEENPLYSTSNNDIGIKRPTGATFTFERRARQQGFSNSFNGLKFRDMGLNTNVTRSNIHDAL 642
M+ RGRG L +R S NPFF TT IG + E+ AP V R P+ + D+ F+Y + SD IG G + S L +G +++ Q R K +G P AT +SR P D + +L+ +KHA K+E+ +Y T++N IG +P ATFT ERRAR QGFSNSF G+K+R+ GL T VT+SN+HD +
Sbjct: 1 MSCRGRGTLTVRRSDNPFFQTTTGDIGQDFTKEVEYAAPTVERAPPR-RTLVDNYDFGFLYEKMSDDIGAGQHHAPSNLSRAMGAQDTPAQLTRLKTMG-------------APASAATIAAAESR-PSAADRVERILEIYKHAPKKEHEMYMTTSNVIGALKPNVATFTAERRARNQGFSNSFQGVKYRNQGLTTAVTKSNVHDMI 192
BLAST of mRNA_P-littoralis_Contig905.6.1 vs. uniprot
Match: A0A482T2A8_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T2A8_9ARCH) HSP 1 Score: 108 bits (270), Expect = 1.370e-25 Identity = 84/238 (35.29%), Postives = 118/238 (49.58%), Query Frame = 1
Query: 22 MAQRGRGCLEIRDSSNPFFTTTNSRIGTSVGRSHEFDAP---PVFRKVP-KVDPVAAGVDWKFMYTRESDRIGTGVPPSDSKLGAVVGRRESLGQRAREKGLGKHPVMYEREEETGVPLRDATCFELKSRV-PEDKDARDALLKSFKHAAKEENPLYSTSN----------------------NDIGIKRPTGATFTFERRARQQGFSNSFNGLKFRDMGLNTNVTRSNIHDALNPQF 654
M+ RGRGCLE+R S NPFF + +G + ++ PVF KV+ ++ F+Y+RESD+IG VP + ++ R E L QR REK L + EREE + + + K +V PED LK +KH AK E+P Y TS ++ G K P+ AT +R R QGFS SFN +K ++ L T +T+SN+H L+PQF
Sbjct: 1 MSLRGRGCLEVRPSDNPFFQPVSHDLGRTSEHCPDWKVNGRLPVFNSSQHKVEG-----NFSFLYSRESDKIGGRVPKPEINEAKMLSRTEFLKQR-REKMLSEM-TQEEREENSEMFAHSSA----KPKVNPED------FLKIYKHEAKYEDPRYLTSGVSHTIFEHLFCYFLTLCTFPFQSEYGKKAPSVATIVVDRAVRPQGFSKSFNNVKPKNTSLTTALTKSNVHRTLDPQF 221
BLAST of mRNA_P-littoralis_Contig905.6.1 vs. uniprot
Match: A0A225W4G4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W4G4_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.080e-16 Identity = 68/214 (31.78%), Postives = 100/214 (46.73%), Query Frame = 1
Query: 22 MAQRGRGCLEIRDSSNPFFTTTNSRIGTSVGRSHEFDAPPV-----FRKVPKVDPVAAGVDWKFMYTRESDRIGTGVPPSDSKLGAVVGRRESLGQRAREKGLGKHPVMYEREEETGVPLR--DATCFELKSRVPEDKDARDALLKSFKHAAKEENPLYSTSNNDIGIKRPTGATFTFERRARQQGFSNSFNGLKFRDMGLNTNVTRSNIHDAL 642
M RG R ++NPF TT++ +G + FDAP + + + P + +FMY S +G GV + R L QR + K V E E+ V +R D T E + PED + +K+ A + +PLY+TS +IG ++ + ER+ R F+NSFNG ++RD GLNT VT+S I D L
Sbjct: 1 MVSRGSSIHHTRRTNNPFMTTSSGVVGIDLHEKVTFDAPKLHSSSSYSHIGTGQPHSTNTLTEFMYQTTSGDLGNGVRAQE---------RLRLSQR-----MDKFTVRKEVEDSGLVTIRHVDVTAPEDCAIRPEDIMPKPIDVKAITEAHSQ-HPLYATSYREIGAEK-SQLKVDIERQGRPNTFTNSFNGFRYRDFGLNTAVTKSRICDQL 198
BLAST of mRNA_P-littoralis_Contig905.6.1 vs. uniprot
Match: A0A8K1CW28_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CW28_PYTOL) HSP 1 Score: 82.8 bits (203), Expect = 5.200e-16 Identity = 64/209 (30.62%), Postives = 98/209 (46.89%), Query Frame = 1
Query: 22 MAQRGRGCLEIRDSSNPFFTTTNSRIGTSVGRSHEFDAPPVFRKVPKVDPVAAGVDWKFMYTRESDRIGTGVPPSD-SKLGAVVGRRESLGQRAREKGLGK-HPVMYEREEETGVPLRDATCFELKSRVPEDKDARDALLKSFKHAAKEENPLYSTSNNDIGIKRPTGATFTFERRARQQGFSNSFNGLKFRDMGLNTNVTRSNIHDAL 642
M RG +R SSNPF TT++ +G ++ F AP + + + FMY S +G G D SKL + + +L + EKG K + + E + D + +R D A+ E+P+Y+TSN DIG+++ + +RR+R F+NSFNG ++RD GLNT +T+S I D L
Sbjct: 1 MVSRGSSVHHMRRSSNPFMTTSSGVVGINLQEPVAFSAPRLSNDNQQQSVQSVSSIKDFMYQTTSQGLGDGFRAQDRSKLSQCMDKL-TLRKDVTEKGQVKINAIDVVSPYEYALSPGDVLPPPIDTRSISD--------------ARIEHPMYATSNRDIGVEK-SQVKVELDRRSRPNTFTNSFNGFRYRDFGLNTAITKSRISDQL 193
BLAST of mRNA_P-littoralis_Contig905.6.1 vs. uniprot
Match: A0A3F2RIF8_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RIF8_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 2.020e-15 Identity = 70/211 (33.18%), Postives = 101/211 (47.87%), Query Frame = 1
Query: 22 MAQRGRGCLEIRDSSNPFFTTTNSRIGTSVGRSHEFDAPPVFRKVPKV--DPVAAGVDWKFMYTRESDRIGTGVPPSDSKLGAVVGRRESLGQRAREKGLGKHPVMYEREEETGVPLR--DATCFELKSRVPEDKDARDALLKSFKHAAKEENPLYSTSNNDIGIKRPTGATFTFERRARQQGFSNSFNGLKFRDMGLNTNVTRSNIHDAL 642
M RG R ++NPF TT++ +G + FDAP + R +V P +A +FMY S +G GV + R L QR + L K E E + +R D E S PE+ + +K+ A + E+P+Y+TSN +IG ++ ER+ R F+NSFNG ++RD GLNT VT+S I D L
Sbjct: 1 MVSRGSSIHHTRRTNNPFMTTSSGIMGIDLQEKVTFDAPQL-RNNNQVGNQPRSANALTEFMYQTTSGGLGEGVRAHE---------RLRLSQRMDKLNLHK-----EIEASGLITIRSVDVAAPEDYSLRPEEILPKSIDIKAITEA-RGEHPMYATSNRNIGAEKAQ-LKVEVERQGRPNTFTNSFNGFRYRDFGLNTAVTKSRICDQL 194
BLAST of mRNA_P-littoralis_Contig905.6.1 vs. uniprot
Match: A0A2D4CFK2_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CFK2_PYTIN) HSP 1 Score: 80.5 bits (197), Expect = 4.110e-15 Identity = 66/212 (31.13%), Postives = 100/212 (47.17%), Query Frame = 1
Query: 22 MAQRGRGCLEIRDSSNPFFTTTNSRIGTSVGRSHEFDAPPVFRKVPKVDPVAAGVDW---KFMYTRESDRIGTGVPPSD-SKLGAVVGRRESLGQRAREKGLGK-HPVMYEREEETGVPLRDATCFELKSRVPEDKDARDALLKSFKHAAKEENPLYSTSNNDIGIKRPTGATFTFERRARQQGFSNSFNGLKFRDMGLNTNVTRSNIHDAL 642
M RG R SSNPF TT++ +G ++ F+AP + + + + FMY S +G GV S+ SKL + + +L ++ E G K PV + E + D VP +D R + E+PLY+TS +IG+++ ER++R F+NSFNG ++RD GLNT +T+S I D L
Sbjct: 1 MVSRGSTVHHTRRSSNPFMTTSSRIVGINLQEPVAFEAPRLLSSDNQQHQGSGSSNALLKDFMYQTTSQALGEGVRASERSKLSQRMDKL-TLQKKVLEGGRVKIKPVDVAQPHEFALSPEDV--------VPPAQDTRSIS------EPRNEHPLYATSTREIGVEKAQ-VKVEIERKSRPNTFTNSFNGFRYRDFGLNTAITKSRICDHL 196
BLAST of mRNA_P-littoralis_Contig905.6.1 vs. uniprot
Match: A0A2P4YQG9_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YQG9_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 8.320e-15 Identity = 66/214 (30.84%), Postives = 101/214 (47.20%), Query Frame = 1
Query: 22 MAQRGRGCLEIRDSSNPFFTTTNSRIGTSVGRSHEFDAPPVF-----RKVPKVDPVAAGVDWKFMYTRESDRIGTGVPPSDSKLGAVVGRRESLGQRAREKGLGKHPVMYEREEETGVPLR--DATCFELKSRVPEDKDARDALLKSFKHAAKEENPLYSTSNNDIGIKRPTGATFTFERRARQQGFSNSFNGLKFRDMGLNTNVTRSNIHDAL 642
M RG +R ++NPF TT++ +G + FDAP + ++ P ++ +FMY S +G V + R L QR + K V E E V +R D T E + PE+ + +K+ A + ++PLY+TS +IG ++ + ER+ R F+NSFNG ++RD GLNT VT+S I D L
Sbjct: 1 MVSRGSSIHHMRCTNNPFMTTSSGIVGIDLHEKVTFDAPKLQGSSSNNQIGTGQPRSSNALTEFMYQTTSGTLGDSVRAQE---------RSRLSQR-----MDKCTVHKEVEASGLVTIRHVDVTAPEDCAIRPEEIMPKPIDVKAITEA-QSQHPLYATSYREIGAEK-SQLKVDVERQGRPNTFTNSFNGFRYRDFGLNTAVTKSRICDQL 198
BLAST of mRNA_P-littoralis_Contig905.6.1 vs. uniprot
Match: G4ZUN0_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4ZUN0_PHYSP) HSP 1 Score: 77.0 bits (188), Expect = 8.510e-14 Identity = 65/214 (30.37%), Postives = 94/214 (43.93%), Query Frame = 1
Query: 22 MAQRGRGCLEIRDSSNPFFTTTNSRIGTSVGRSHEFDAPPVF-----RKVPKVDPVAAGVDWKFMYTRESDRIGTGVPPSDSKLGAVVGRRESLGQRAREKGLGKHPVMYEREEETGVPLR--DATCFELKSRVPEDKDARDALLKSFKHAAKEENPLYSTSNNDIGIKRPTGATFTFERRARQQGFSNSFNGLKFRDMGLNTNVTRSNIHDAL 642
M RG R ++NPF TT++ +G + FDAP + ++ P + +FMY S +G GV + R L QR + K + E E V +R D E + PE+ + +K A + E+P+Y+TS DIG + E R F+NSFNG ++RD GLNT VT+S I D L
Sbjct: 1 MVSRGSTIHHTRRTNNPFMTTSSGIVGIDLNEKVAFDAPQLRSSSSNNQIGTGQPRSTNSLTEFMYQTTSGALGEGVHAQE---------RSRLSQR-----MDKLTLHKEVESSGVVTIRRVDVAAPEEYAIRPEEVMPKPIDIKGITEA-RGEHPMYATSYRDIGADKAQ-LKVEMEHLGRPNTFTNSFNGFRYRDFGLNTAVTKSRICDQL 198 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig905.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig905.6.1 >prot_P-littoralis_Contig905.6.1 ID=prot_P-littoralis_Contig905.6.1|Name=mRNA_P-littoralis_Contig905.6.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=213bp MAQRGRGCLEIRDSSNPFFTTTNSRIGTSVGRSHEFDAPPVFRKVPKVDPback to top mRNA from alignment at P-littoralis_Contig905:45816..50778- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig905.6.1 ID=mRNA_P-littoralis_Contig905.6.1|Name=mRNA_P-littoralis_Contig905.6.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4963bp|location=Sequence derived from alignment at P-littoralis_Contig905:45816..50778- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig905:45816..50778- >mRNA_P-littoralis_Contig905.6.1 ID=mRNA_P-littoralis_Contig905.6.1|Name=mRNA_P-littoralis_Contig905.6.1|organism=Pylaiella littoralis U1_48|type=CDS|length=639bp|location=Sequence derived from alignment at P-littoralis_Contig905:45816..50778- (Pylaiella littoralis U1_48)back to top |