prot_P-littoralis_Contig904.20.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig904.20.1
Unique Nameprot_P-littoralis_Contig904.20.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length267
Homology
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BLAST of mRNA_P-littoralis_Contig904.20.1 vs. uniprot
Match: D7G4C6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4C6_ECTSI)

HSP 1 Score: 134 bits (336), Expect = 5.250e-34
Identity = 72/145 (49.66%), Postives = 96/145 (66.21%), Query Frame = 0 
Query:  124 AKKRVAGSIGRPPRPSAKPPTKSPRVAKKGPAKKKAALNKPGVDENGNPVDREKKFPRPLVEQEKIALLKSIEAVG-GVEAYASKGCSETSYLWWETNILQGLIAALRDDETYHDDPKVIFGSIKFFSAIYDWVGSQKTQLGRYL 267
            +K R  GS GRPPR            +KKGP+K+KA + +  +D +GN + R+ +FPR L + EK  LL+ I+ +  GVEAY +KG SE SYLWW+ N+L+     L DDE Y +DP+V+FGSI+ FS IYDWVGSQKTQL  Y+
Sbjct:  161 SKTRTGGSSGRPPR----------HPSKKGPSKRKAEMKQTFLDIDGNEIVRKAEFPRELADIEKKVLLQVIDDLPQGVEAYGAKGVSEASYLWWDCNVLEDTAKTLADDENYQNDPQVLFGSIENFSPIYDWVGSQKTQLSTYV 295
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig904.20.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G4C6_ECTSI5.250e-3449.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..180
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig904contigP-littoralis_Contig904:99680..103235 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig904.20.1mRNA_P-littoralis_Contig904.20.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig904 99680..103235 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig904.20.1 ID=prot_P-littoralis_Contig904.20.1|Name=mRNA_P-littoralis_Contig904.20.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=267bp
ADAAAAIVDLQGAGCAGSRGSRASRRVRGVSSLVASNLSQEAPLEGSDGP
AARACTPLRQQRPPSRTASPSLGRWVSKTSGGASGGRREGKKSAADEGEE
EDEAGGSSAAEVKKAHEKALSTKAKKRVAGSIGRPPRPSAKPPTKSPRVA
KKGPAKKKAALNKPGVDENGNPVDREKKFPRPLVEQEKIALLKSIEAVGG
VEAYASKGCSETSYLWWETNILQGLIAALRDDETYHDDPKVIFGSIKFFS
AIYDWVGSQKTQLGRYL
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