mRNA_P-littoralis_Contig902.10.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig902.10.3
Unique NamemRNA_P-littoralis_Contig902.10.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig902.10.3 vs. uniprot
Match: D7FLW5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLW5_ECTSI)

HSP 1 Score: 437 bits (1125), Expect = 4.170e-146
Identity = 223/291 (76.63%), Postives = 244/291 (83.85%), Query Frame = 3
Query:  435 GYKVDRAGRCSGVEALPPLKNRYYALRHGQSVANMEGIISSDPEVGSVKHGLTSNGRSQARIAATALIEVVGRNRLDSLVFVSSDFLRARQTAEECRAALQNIISFENQAMTDASXXXXXXXXXXXXXXXXXXXXXXXSDETPADGPETQEGGGGVSLDEGTVGGYDVSPPIVIRKELRERWFGELEGTILVNYNKVWPEDLKDGAQEGYGVESVCDVASRVGRLVRSLEGEYEDADIVFSSHADTLQIAQCHIAGADERLFSQYRFKNGEVRRCLQDPASLPPPAPLSFQ 1307
            GYKV+ +GRC+G+EALPPLKNRYYALRHGQSVANMEGIISS+P+VGSVKHGLTSNGRSQAR+AATALIE VGR+RLDSLVFVSS+FLRARQTAEECRAALQNI+SFE  AM                            D+  ADG   + G G  SLDEG++GGYDVSPP+VIR+ELRER FGEL+GTILVNYNKVWPEDLKDG QEGYGVESVCDVASRVGRLVR+LE +YEDADIV SSHADTLQIAQC+IAGADERLFSQYRFKNGEVRR L+DP SLPPPAPLSFQ
Sbjct:   89 GYKVEESGRCTGLEALPPLKNRYYALRHGQSVANMEGIISSNPKVGSVKHGLTSNGRSQARVAATALIEAVGRDRLDSLVFVSSEFLRARQTAEECRAALQNILSFERAAMAMGGGK---------------------GDDAAADGTGAEGGDGEFSLDEGSMGGYDVSPPLVIRQELRERAFGELDGTILVNYNKVWPEDLKDGMQEGYGVESVCDVASRVGRLVRALERDYEDADIVLSSHADTLQIAQCYIAGADERLFSQYRFKNGEVRRLLRDPDSLPPPAPLSFQ 358          
BLAST of mRNA_P-littoralis_Contig902.10.3 vs. uniprot
Match: A0A836CKV0_9STRA (Histidine phosphatase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKV0_9STRA)

HSP 1 Score: 295 bits (754), Expect = 7.070e-92
Identity = 161/294 (54.76%), Postives = 191/294 (64.97%), Query Frame = 3
Query:  426 GAVGYKV-DRAGRCSGVEALPPLKNRYYALRHGQSVANMEGIISSDPEVGSVKHGLTSNGRSQARIAATALIEVVGRNRLDSLVFVSSDFLRARQTAEECRAALQNIISFENQAMTDASXXXXXXXXXXXXXXXXXXXXXXXSDETPADGPETQEGGGGVSLDEGTVGGYDVSPPIVIRKELRERWFGELEGTILVNYNKVWPEDLKDGAQEGYGVESVCDVASRVGRLVRSLEGEYEDADIVFSSHADTLQIAQCHIAGADERLFSQYRFKNGEVRRCLQDPASLPPPAPLSF 1304
            GA GY + D  GR S V  LP L+NRY+ALRHGQSVANMEGIISSDP VG+VKHGLT++G+ QAR+AAT LIE VGR  LD L+F+SSDF RAR+TAEECRAA+  I  FE +    ++                                               +G     PP VIR+ELRER+FGEL+GT+L+NYNKVWP DL D    GYGVESV DV +R+ RL  SLE +Y    +V +SHADTLQI QC++AGADERLFSQYRFKNGEVR  LQ+  SLPPP PLS+
Sbjct:   14 GAAGYLLKDTIGR-STVPRLPLLQNRYFALRHGQSVANMEGIISSDPAVGTVKHGLTTSGKVQARVAATQLIEAVGREALDDLIFISSDFTRARETAEECRAAVVRITEFEREERAVSTLLLQ------------------------------------------VIGETFECPPAVIRQELRERYFGELDGTVLLNYNKVWPADLIDSRHAGYGVESVQDVCARMQRLFLSLEEQYAGKCMVLTSHADTLQIMQCYVAGADERLFSQYRFKNGEVRALLQEQTSLPPPKPLSY 264          
BLAST of mRNA_P-littoralis_Contig902.10.3 vs. uniprot
Match: A0A6V1VLS3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VLS3_HETAK)

HSP 1 Score: 242 bits (618), Expect = 3.520e-71
Identity = 129/281 (45.91%), Postives = 173/281 (61.57%), Query Frame = 3
Query:  471 VEALPPLKNRYYALRHGQSVANMEGIISSDPEVGSVKHGLTSNGRSQARIAATALIEVVGRN--RLDSLVFVSSDFLRARQTAEECRAALQNIISFENQAMTDASXXXXXXXXXXXXXXXXXXXXXXXSDETPADGPETQEGGGGVSLDEGTVGGYDVSPPIVIRKELRERWFGELEGTILVNYNKVWPEDLKDGAQEGYGVESVCDVASRVGRLVRSLEGEYEDADIVFSSHADTLQIAQCHIAGADERLFSQYRFKNGEVRRCLQDPASLPPPAPLSFQ 1307
            V  LPPL+N YYALRHGQS+AN+EGIISSD  VG+ +HGLTS+GR+QAR AA  L+ ++  +    + LVF+SS+F RAR+TAEE   A+  II +E + +                             E P++                 V  + +  P+ I   LRER+FGEL+GT+L NYNKVWPED+++    GYGVESV DV  R+   +  ++ +Y++  IV +SHADTLQI QC++AG D RLFSQYRFKN EVR+  QDP+ +P P PLS+Q
Sbjct:   73 VPILPPLRNSYYALRHGQSLANLEGIISSDVLVGTTRHGLTSSGRAQARKAAVPLLSMIAGDGFTFEDLVFISSNFTRARETAEETIRAIDRIIEYEEEPVAT---------------------------ELPSE----------------NVPSHQI--PLAIFPGLRERYFGELDGTVLPNYNKVWPEDVQNAQHSGYGVESVNDVCRRIEETILEIDQQYQNKAIVLTSHADTLQITQCYLAGVDPRLFSQYRFKNAEVRKLAQDPSCIPSPMPLSYQ 308          
BLAST of mRNA_P-littoralis_Contig902.10.3 vs. uniprot
Match: A0A8J5XRL8_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XRL8_DIALT)

HSP 1 Score: 235 bits (599), Expect = 1.340e-68
Identity = 148/331 (44.71%), Postives = 186/331 (56.19%), Query Frame = 3
Query:  318 GWRAPLAHAFLSSSRTSSRNLATAISLTSTDKEAEGGAVGYKVDRAGRCS-GVEALPPLKNRYYALRHGQSVANMEGIISSDPEVGSVKHGLTSNGRSQARIAATALIEVVGRNRLDSLVFVSSDFLRARQTAEECRAALQNIISFENQAMTDASXXXXXXXXXXXXXXXXXXXXXXXSDETPADGPETQEGGGGVSLDEGTVGGYDVSPPIVIRKELRERWFGELEGTILVNYNKVWPEDLKDGAQEGYGVESVCDVASRVGRLVRSLEGEYEDADIVFSSHADTLQIAQCHIAGADERLFSQYRFKNGEVRRCLQDPASLPPPAPLSFQ 1307
            G+  PLA A +SS  ++  +  T  +L ST+  A+       + + G+C    E LPPLKN Y+ LRHGQS AN+EGIISSDP VG++KHGLT +GR QAR AAT LI++VGR RLD L F SSDF RA QTAEE  +A++N+I +E+                                      P+  E    ++    ++ G   +P       LRERWFG L+G  L NY  VWP DL       + VESV  VA R+  L+  +E E     IV +SHADTLQIAQ  IAG D R FSQYRF NGEVR   QDPASLP P PL++Q
Sbjct:   15 GFLVPLASA-MSSGASALAHAGTGYTLISTELLAQ-------LMQVGQCPCSTEPLPPLKNCYFGLRHGQSEANVEGIISSDPAVGTIKHGLTLDGRLQARRAATRLIDMVGRERLDRLFFYSSDFTRAWQTAEEALSAVKNVIEYESSLFY----------------------------------PDRVE----LARVPDSLAGVARTPL------LRERWFGSLDGKALRNYQHVWPRDLVSAEHCHFDVESVSAVAQRIRTLILEIEAERTGCSIVLTSHADTLQIAQVFIAGEDPRSFSQYRFANGEVRALRQDPASLPRPVPLTYQ 293          
BLAST of mRNA_P-littoralis_Contig902.10.3 vs. uniprot
Match: A0A7S0L2B8_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L2B8_9EUKA)

HSP 1 Score: 227 bits (579), Expect = 1.870e-65
Identity = 132/277 (47.65%), Postives = 157/277 (56.68%), Query Frame = 3
Query:  480 LPP-LKNRYYALRHGQSVANMEGIISSDPEVGSVKHGLTSNGRSQARIAATALIEVVGRNRLDSLVFVSSDFLRARQTAEECRAALQNIISFENQAMTDASXXXXXXXXXXXXXXXXXXXXXXXSDETPADGPETQEGGGGVSLDEGTVGGYDVSPPIVIRKELRERWFGELEGTILVNYNKVWPEDLKDGAQEGYGVESVCDVASRVGRLVRSLEGEYEDADIVFSSHADTLQIAQCHIAGADERLFSQYRFKNGEVRRCLQDPASLPPPAPLSFQ 1307
            LPP L+NRY+ALRHGQS AN+EGIISSDP VG+V HGLT  G+ QAR AAT LI+ VGR +LD L F SSDF RA QTA+E  A + N++ +EN AM + S                                         +L E    G   +P       LRER+FGELE   L+NY KVWP DL   A   + VESV  VA RV   +   E  +  A IV  SHADTLQI+QC IAGAD R F QYRF+NGEVR   Q   +LP P PLS++
Sbjct:   79 LPPRLRNRYFALRHGQSEANVEGIISSDPSVGTVIHGLTPMGKLQARRAATKLIDAVGREQLDRLYFYSSDFTRAAQTADEALAGVMNVLQYENAAMDEDSS---------------------------------------AALPEALTAGVRRTPL------LRERYFGELEAQALINYQKVWPRDLVSAAHTSFSVESVEAVAERVRSFILQAEEAHSHATIVLVSHADTLQISQCFIAGADCRTFCQYRFQNGEVRELAQGEDTLPAPVPLSYE 310          
BLAST of mRNA_P-littoralis_Contig902.10.3 vs. uniprot
Match: A0A7S4C074_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C074_CHRCT)

HSP 1 Score: 225 bits (574), Expect = 9.120e-65
Identity = 126/274 (45.99%), Postives = 157/274 (57.30%), Query Frame = 3
Query:  486 PLKNRYYALRHGQSVANMEGIISSDPEVGSVKHGLTSNGRSQARIAATALIEVVGRNRLDSLVFVSSDFLRARQTAEECRAALQNIISFENQAMTDASXXXXXXXXXXXXXXXXXXXXXXXSDETPADGPETQEGGGGVSLDEGTVGGYDVSPPIVIRKELRERWFGELEGTILVNYNKVWPEDLKDGAQEGYGVESVCDVASRVGRLVRSLEGEYEDADIVFSSHADTLQIAQCHIAGADERLFSQYRFKNGEVRRCLQDPASLPPPAPLSFQ 1307
            PL+NRY+ LRHGQS AN+ GIISSDP +G+  HGLT+ GR QAR AAT L+++VGR  L S  F SSDF RA QTAEE  A + N++ +EN   TD S                         E PA             L      G  V+P +      RER+FG+ +GT+L NY +VWP DL       +GVESV DV  R+   +  +E +++   IV  SHADTLQIAQC++AGAD R F QYRFKNGEVR   Q   +LP P PLS+Q
Sbjct:   77 PLRNRYFGLRHGQSEANVAGIISSDPSIGTTMHGLTALGRLQARRAATTLVDLVGRENLGSTHFYSSDFTRALQTAEEALAGVINLLEYENSVETDDSL------------------------ELPA-------------LPSSLTDGVKVTPLV------RERYFGDFDGTVLSNYQQVWPRDLVSAQHTTFGVESVQDVTRRLRECILQMEEQHDGCTIVLVSHADTLQIAQCYLAGADCRTFCQYRFKNGEVRLLAQGEDTLPAPVPLSYQ 307          
BLAST of mRNA_P-littoralis_Contig902.10.3 vs. uniprot
Match: A0A7S0DJZ6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DJZ6_9EUKA)

HSP 1 Score: 223 bits (567), Expect = 6.270e-63
Identity = 124/277 (44.77%), Postives = 161/277 (58.12%), Query Frame = 3
Query:  471 VEALPPLKNRYYALRHGQSVANMEGIISSDPEVGSVKHGLTSNGRSQARIAATALIEVVGRNRLDSLVFVSSDFLRARQTAEECRAALQNIISFENQAMTDASXXXXXXXXXXXXXXXXXXXXXXXSDETPADGPETQEGGGGVSLDEGTVGGYDVS-PPIVIRKELRERWFGELEGTILVNYNKVWPEDLKDGAQEGYGVESVCDVASRVGRLVRSLEGEYEDADIVFSSHADTLQIAQCHIAGADERLFSQYRFKNGEVRRCLQDPASLPPPAPL 1298
            V  LP LKNRY+ALRHG+S+AN+EGIISS+ + G+  HGLT+ G+ QAR +AT L+E +GR+ L+ LV  SS+F RAR+TA EC +A+Q I+ FE++                                                     VGG+    PP+ I   L ER FGEL+ T + NYN VWP DL D     +GVESV  V  RV  ++  +E ++ + +I+ +SHADTLQI QC+IA  D RLFSQYRFKN E+RR  QDP SLP PAPL
Sbjct:  140 VPVLPKLKNRYFALRHGESLANLEGIISSNYDTGTTIHGLTTMGKMQARQSATVLLECIGRDGLEHLVVYSSNFTRARETAFECVSAMQRIVDFESE-----------------------------------------------------VGGWSGRIPPLEIEDRLIERGFGELDTTEVTNYNYVWPLDLYDAKHSAFGVESVESVCRRVRSMIVDMEAKHTNQNILLTSHADTLQIMQCYIAQIDPRLFSQYRFKNAEIRRLSQDPNSLPNPAPL 363          
BLAST of mRNA_P-littoralis_Contig902.10.3 vs. uniprot
Match: A0A7S0Z5T0_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z5T0_9CRYP)

HSP 1 Score: 212 bits (540), Expect = 1.530e-60
Identity = 118/273 (43.22%), Postives = 159/273 (58.24%), Query Frame = 3
Query:  486 PLKNRYYALRHGQSVANMEGIISSDPEVGSVKHGLTSNGRSQARIAATALIEVVGRNRLDSLVFVSSDFLRARQTAEECRAALQNIISFENQAMTDASXXXXXXXXXXXXXXXXXXXXXXXSDETPADGPETQEGGGGVSLDEGTVGGYDVSPPIVIRKELRERWFGELEGTILVNYNKVWPEDLKDGAQEGYGVESVCDVASRVGRLVRSLEGEYEDADIVFSSHADTLQIAQCHIAGADERLFSQYRFKNGEVRRCLQDPASLPPPAPLSF 1304
            PL+NRY+ALRHGQS AN++ IISS P  G+  HGLT  GR QA+ +A  L+E +G   ++ ++F SS+F RARQTAEE  AAL+ ++                                             +E  G  + D+      D S  ++  + LRERWFG+L+ TI+ NYNKVWP DLKD     +GVESV    +R+  ++  LEGE+E  D+V +SHADTLQI Q  +AG D R FSQ+RFKNGEVRR LQD +++P P PL++
Sbjct:   32 PLRNRYFALRHGQSEANVDNIISSLPARGTTIHGLTGLGRLQAQQSAPRLLEAIGDGHVEKVLFCSSNFTRARQTAEEAAAALKELL---------------------------------------------RETRGSATADK-----LDTSVTVI--EPLRERWFGDLDNTIITNYNKVWPADLKDAQCVQHGVESVDACCARLSAVILQLEGEHEGRDLVLTSHADTLQILQSWLAGEDPRRFSQFRFKNGEVRRLLQDASAMPDPVPLTY 252          
BLAST of mRNA_P-littoralis_Contig902.10.3 vs. uniprot
Match: A0A7S4DTI5_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DTI5_9EUKA)

HSP 1 Score: 213 bits (542), Expect = 1.400e-58
Identity = 124/293 (42.32%), Postives = 160/293 (54.61%), Query Frame = 3
Query:  423 GGAVGYKVDRAGRCSGVEALPPLKNRYYALRHGQSVANMEGIISSDPEVGSVKHGLTSNGRSQARIAATALIEVVGRNRLDSLVFVSSDFLRARQTAEECRAALQNIISFENQAMTDASXXXXXXXXXXXXXXXXXXXXXXXSDETPADGPETQEGGGGVSLDEGTVGGYDVSPPIV-IRKELRERWFGELEGTILVNYNKVWPEDLKDGAQEGYGVESVCDVASRVGRLVRSLEGEYEDADIVFSSHADTLQIAQCHIAGADERLFSQYRFKNGEVRRCLQDPASLPPPAPL 1298
            G A G   + A     ++ LP L+NRY+ALRHG+S AN+ GIISS+ E GS  HGLT  G +QAR AAT L+E +GR+ +  L+  SS+F RARQTA EC  A++NI+ +E                                                 +L  GT      S  ++ I   L ER FGEL+ T + NYN VWP DL D     +GVE+V  V +RV  L+  LE  ++   I+ +SHADTLQI QC++AG D RLFSQYRF+N EVR  +Q   SLPPPAPL
Sbjct:  117 GEAWGLVPNNANGSIDIQVLPRLRNRYFALRHGESEANLAGIISSNYETGSTIHGLTPKGVTQAREAATFLLETIGRDNVQDLIVYSSNFTRARQTASECMGAVENILEYET------------------------------------------------ALTRGTDKALPSSSSVIHIDNRLIERGFGELDTTKVTNYNYVWPLDLYDAHHTAFGVEAVNSVVARVKELILELEQRHDRKLILLTSHADTLQIMQCYMAGVDPRLFSQYRFRNAEVRPLVQQTGSLPPPAPL 361          
BLAST of mRNA_P-littoralis_Contig902.10.3 vs. uniprot
Match: A0A7S2V2Q2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2Q2_9STRA)

HSP 1 Score: 200 bits (509), Expect = 1.120e-55
Identity = 118/290 (40.69%), Postives = 151/290 (52.07%), Query Frame = 3
Query:  432 VGYKVDRAGRCSGVEALPPLKNRYYALRHGQSVANMEGIISSDPEVGSVKHGLTSNGRSQARIAATALIEVVGRNR-LDSLVFVSSDFLRARQTAEECRAALQNIISFENQAMTDASXXXXXXXXXXXXXXXXXXXXXXXSDETPADGPETQEGGGGVSLDEGTVGGYDVSPPIVIRKELRERWFGELEGTILVNYNKVWPEDLKDGAQEGYGVESVCDVASRVGRLVRSLEGEYEDADIVFSSHADTLQIAQCHIAGADERLFSQYRFKNGEVRRCLQDPASLPPPAPL 1298
            +   +  +G C  +  LPPL+N+YYA RHGQS AN+ GIISS P  G+  HGLT  G+ QAR AA A+++++G +  L+ L+  SSDF RAR+TA E           E   MTD S                                                      P + I K LRER+FGEL+G  L+ YN VWP DL+D     +GVESV  V  RV   +  LE  +E+  I+ +SHADTLQI Q ++A AD R FS YRFKNGEVR  +Q P+SLP P PL
Sbjct:   44 ISMSLSLSGECL-LPKLPPLRNKYYAFRHGQSTANVRGIISSSPAKGTTSHGLTETGKRQAREAAPAIVDMIGGSESLNDLIVYSSDFTRARETALEAVD--------EMWRMTDVS---------------------------------------------------SPKPVVNIEKGLRERFFGELDGKDLITYNDVWPLDLEDAHHNTFGVESVNTVVFRVRETIMELEERHENKSIILTSHADTLQILQLYVANADVRSFSSYRFKNGEVRALIQKPSSLPTPVPL 273          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig902.10.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLW5_ECTSI4.170e-14676.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CKV0_9STRA7.070e-9254.76Histidine phosphatase superfamily n=1 Tax=Tribonem... [more]
A0A6V1VLS3_HETAK3.520e-7145.91Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8J5XRL8_DIALT1.340e-6844.71Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A7S0L2B8_9EUKA1.870e-6547.65Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S4C074_CHRCT9.120e-6545.99Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S0DJZ6_9EUKA6.270e-6344.77Hypothetical protein (Fragment) n=1 Tax=Amorphochl... [more]
A0A7S0Z5T0_9CRYP1.530e-6043.22Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A7S4DTI5_9EUKA1.400e-5842.32Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A7S2V2Q2_9STRA1.120e-5540.69Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig902contigP-littoralis_Contig902:49053..53701 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FLW5
PFAMsHis_Phos_1
Model size1998
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorychloroplast
Exons6
Evalue3.4e-150
EggNOG OGs28K5R@1|root,2QSKC@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-26_001440.1
DescriptionHistidine phosphatase superfamily (branch 1)
Cds size1233
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig902.10.3prot_P-littoralis_Contig902.10.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig902 49130..53013 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791810.286484-UTR-P-littoralis_Contig902:49052..491291680791810.286484-UTR-P-littoralis_Contig902:49052..49129Pylaiella littoralis U1_48UTRP-littoralis_Contig902 49053..49129 +
1680791810.380872-UTR-P-littoralis_Contig902:53013..537011680791810.380872-UTR-P-littoralis_Contig902:53013..53701Pylaiella littoralis U1_48UTRP-littoralis_Contig902 53014..53701 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791810.303876-CDS-P-littoralis_Contig902:49129..495901680791810.303876-CDS-P-littoralis_Contig902:49129..49590Pylaiella littoralis U1_48CDSP-littoralis_Contig902 49130..49590 +
1680791810.3150628-CDS-P-littoralis_Contig902:50143..502491680791810.3150628-CDS-P-littoralis_Contig902:50143..50249Pylaiella littoralis U1_48CDSP-littoralis_Contig902 50144..50249 +
1680791810.3270972-CDS-P-littoralis_Contig902:50818..511961680791810.3270972-CDS-P-littoralis_Contig902:50818..51196Pylaiella littoralis U1_48CDSP-littoralis_Contig902 50819..51196 +
1680791810.3376029-CDS-P-littoralis_Contig902:51794..518961680791810.3376029-CDS-P-littoralis_Contig902:51794..51896Pylaiella littoralis U1_48CDSP-littoralis_Contig902 51795..51896 +
1680791810.349376-CDS-P-littoralis_Contig902:52324..524261680791810.349376-CDS-P-littoralis_Contig902:52324..52426Pylaiella littoralis U1_48CDSP-littoralis_Contig902 52325..52426 +
1680791810.3640902-CDS-P-littoralis_Contig902:52929..530131680791810.3640902-CDS-P-littoralis_Contig902:52929..53013Pylaiella littoralis U1_48CDSP-littoralis_Contig902 52930..53013 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig902.10.3

>prot_P-littoralis_Contig902.10.3 ID=prot_P-littoralis_Contig902.10.3|Name=mRNA_P-littoralis_Contig902.10.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=411bp
MTVLSLCVFSLLCSRLHPASAWTTRPSLQHARHVSYTRSLDSTSSSSSSS
SSSNNSGSGSSRPTSCHTAAPGDSSVFFPGGWRAPLAHAFLSSSRTSSRN
LATAISLTSTDKEAEGGAVGYKVDRAGRCSGVEALPPLKNRYYALRHGQS
VANMEGIISSDPEVGSVKHGLTSNGRSQARIAATALIEVVGRNRLDSLVF
VSSDFLRARQTAEECRAALQNIISFENQAMTDASSSSSSSSSSSSSSSSS
GGGGGEESDETPADGPETQEGGGGVSLDEGTVGGYDVSPPIVIRKELRER
WFGELEGTILVNYNKVWPEDLKDGAQEGYGVESVCDVASRVGRLVRSLEG
EYEDADIVFSSHADTLQIAQCHIAGADERLFSQYRFKNGEVRRCLQDPAS
LPPPAPLSFQ*
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mRNA from alignment at P-littoralis_Contig902:49053..53701+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig902.10.3 ID=mRNA_P-littoralis_Contig902.10.3|Name=mRNA_P-littoralis_Contig902.10.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=4649bp|location=Sequence derived from alignment at P-littoralis_Contig902:49053..53701+ (Pylaiella littoralis U1_48)
GCAAGTTGAGACAATGAGCCAGCGAGCACTGAGCATCCCTCCGTTCTCCC TATCTGCTGCCTCCCTGCTGCAGAGCTATGACGGTGCTTTCTCTCTGCGT TTTCTCTCTGCTGTGCTCCCGATTGCACCCCGCTTCAGCATGGACAACCC GGCCATCATTGCAACATGCACGCCACGTTTCCTACACGCGATCCCTGGAC AGCACCAGTAGCAGTAGCAGCAGCAGCAGCAGCAGCAACAACAGCGGCAG CGGCAGCAGTAGACCTACATCCTGCCACACTGCTGCTCCTGGGGACAGTA GTGTTTTTTTTCCCGGCGGATGGAGAGCACCGCTAGCGCATGCTTTCCTC AGCAGCAGTCGCACCAGCAGCAGGAATTTGGCAACGGCAATCTCACTGAC GTCAACCGACAAAGAGGCGGAGGGCGGTGCTGTAGGGTACAAGGTCGACC GGGCGGGAAGGTGCAGCGGCGTGGAGGCTCTGCCGCCGTTGAAGAACAGG TACTACGCCTTGAGGCATGGTCAGAGCGTCGCCAACATGTGAGTTCCTCG TTATGAAGGCACCGGAATCCTTGCCGTATGTTGTGCCGGGTGTGATTGTG TTTGTTACATTTCGAGTGTGGTGTAACTTGTTGCACCTAGTACTCCGTAC TTCGTATTGTACTGCTGTGTTGAACTGCAGTAGATGGATGTTGTGCACAG CAACTTGATGCACACTTTGATACTGATATACACCGTCTGTCATTGTTGGG TTTCTCTCCCTTTATCTCTCTCTCTCTCTCTCTCTCCCACGCACGGGCAC ACATTTGCTGTATATGTTTTCAATTGCTTATTTTGTGCCCCATCTCTCCA GCCATCCCGCCTGATTCCCCAGCCGCTCAACTCTCGGCACTCCACGGAGA AAGAAGGCCGTCGGTCATGTGTCGGCAGCTGTAAAGGGGGTGCAATACCA GGCACGTCCCTACCCTGACATACCGACCGATTCGCCTCACCTTCTTCGTA CCGTGCTTCGAAGTATGATATAACATCATCTCTCGCACTCTGCAGCACAC TGTAATGTTCACCCGCGTGTCGGATGATGCCGGCTGCGCAGGGAGGGCAT CATCTCCTCCGACCCCGAGGTCGGGTCTGTCAAGCACGGCCTCACCTCGA ACGGGCGCTCGCAGGCCAGAATAGCCGCCACCGCGTTAATAGAAGTGGTG AGGAACGAGGGGAGAGGCCTGGACCTGTTTTTGTTCCGCAGTATTCGAGG GACTCCGGGGCAATCAGATGGCAGCTTTGTTGCTGTAATTGAACTTGCGG AGGGAAACTACGACGGGAGTTCAGAAAATCCGAATGTTCTGCAATTTGCC GGGTGCTGCCATAGAGACGGGTCCCCTACAGTACAGTAGGTGGCTGGGGT TCGGCTTGTCTCGTCACTATGGGCGACTCTGTAGGGCCGACGCGTTTTGG CTTTGTAGCAACTTGGGCGCGCCTTTGATGTGTTCGGGGCCACGTGATCG GTACATGGCCGGTGTCAGTCGCGGTTCACTCAAGCATCTGACAAAAAGTC CGCTCCTGCTCCTGCTCCTGCTCTTGGCCCTACTATTGCTTCCATTGTTT TCGCTGCTGCCTTTGTTGATCATTTTTCGTTTCGTGCTGTGGCTTCCGCT GTTGTTGCGTCTCTCTGCCATGGTTGCCTGCTGCTGATGTTTTCTGCTTC AAACTACACCGAAATTGATTCGACGGACCTCCTGGAATCATAACATGGTC GATACGGTGGCGGCAGGTGGGACGCAACAGGCTGGACTCACTGGTGTTCG TTTCGAGCGATTTTCTGCGCGCGCGACAAACCGCAGAGGAGTGCCGCGCG GCCCTTCAGAATATAATCTCCTTCGAAAACCAAGCGATGACAGACGCAAG CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCG GCGGCGGCGGCGGCGAAGAGAGTGATGAAACGCCCGCCGATGGTCCGGAA ACCCAGGAAGGCGGCGGTGGGGTATCGTTGGACGAGGGGACTGTCGGCGG GTACGATGTCTCTCCTCCGATCGTGATCCGGAAGGAGCTGAGAGAGAGGT GGTTCGGGGAGCTGGAAGGGACGATTCTTGTGAACTATAACAAGGTGCGC TGGGGCGGCTGATTGATTTCTGAAGTAAATTGACTGGTTACTCTCAAGTA GTCGACAACATGTCACCACGAAGATGCATACCAAAACGTGTGTCTGCGGC AAGGTTCGGCACTTTTGGAGTTGCGCTATTGAGCCTGTCGCTGTATTTGT TTGGTGCCATTGAGCCGTGCGTTGGCATATCGAAAACGTTCCATGTTTGT GTCCGTGATCTCCTGGGTGTAATTGCTCGCCGGTGAAACAAGAAGGCTGC ACGTTGCTCCGTGGGCTCTCTCTCTGTGCCTCCTCATGAGTTGTGCTATG CAACCGTCTCTTGTAGGCTTGGCCACCCTCAAGGCGTTTGGGCCAATCGG AACTCGACGACCAAATCAAACAACCAATATTAAAAAAAATATATTGCGGG CAGTCACTTCCTTTCTGCCCCTGTCGTGGTTCTGTTCAGCTGCCAATAAC AGTTTGTATATGCCCCGTCCTAACCGTGTAGGGATTTGAGCCAATATTTA TTTTGTAAGTCTAACGACTTCGAGCACGGCGTGGAATAACGATCACGCCT GTTGATTGCTTCACTTTGATCCCCACACGATACTGCCTTCAGGTTTGGCC AGAGGATCTGAAGGATGGAGCGCAGGAGGGATACGGCGTTGAGAGCGTGT GTGACGTGGCGTCACGAGTCGGGCGGCTCGTTCGGTCTCTCGAGGTAAAT GTCCAAACGACGACCATATCATCCCACAACCCGTCTCTCCCGTTTTTTTC ATCGTATGTTCGGAAGATAGTGGCATGAAATGGAGCAGTAACCCACACCT TTCGGCAGGCTTTCGAAAGGTCGATTACCCCGCATCGGAAATAACGTCCT GTTTGCTGCCAGTTGGCAGGGGAAAGTCTCTGCAGAGGCTAAAAACGCGG GGCAACAATTTCACCTGTCCCCCTCGTTTTATGGACGTTCATCATCTTTT TTTTTATGTTTCATCCTCTACCTTCTTCCTCCCTGTATTTCTGTTTTGTG ACACATCCATGGCTATTGTGGCTTACTTCCCTGACAAGTCACGTTCACTC GCGGTTGTTTTTTTTTTGCCTTTTTCTCACTCTCTCTCGCTGTCCCTCTC TGCCCCTCTCCAATACCCACAGGGAGAGTATGAGGATGCAGACATCGTTT TCTCTTCGCACGCGGACACCCTCCAGATCGCACAATGCCACATAGCCGGA GCCGACGAGCGCCTATTTTCCCAGGTTTGTCGGGGGTTTCCAAGTCTTGC GGCGGTAGCAACGGATGCGGCGGGAACACCTTTGCTCCGTGCTTTCCTTG CACTGACGGCTAGCTTATGGCGCCAAATTGACCGTCGACATTGCGATTCC GGTCCGTCGGGGTAGAGCACCATGGAGAGGCGGGTGGGGGTATTCACGGA AGTGGCTGCTGAGTTTGTCCTTGCGGAAAATGCATGCCAAGGCCTTTGAC TGCACCGGGTCTAAAGACATAAATGTGCTGTAGATTGATGCTCAGAGTAA AACCCGCGGCAGTGGGGATCGGTTCTCCTTTCCCAGCGGTATCCTGGCTT TCGTCTGGGGCGCGTGCTGTTTCTGGCCACAGGTTATATGCACTCCCACT TTGATGTTCCGCTCTGCCCGCCCCGCCCCCTCCCACAAGAAAAACAGATT ATGTACCTACATTTTTTGTCGCGATTCACGATGCGAATTTTGAATCAATC CCGCCGCATCCTATTTTTTTCCTGCAGTACCGGTTCAAGAACGGAGAAGT GAGAAGATGTCTCCAGGATCCTGCTTCACTCCCGCCACCAGCCCCGCTGT CGTTCCAATAGCGGCGGACGATCGTTTATCGATGTGTGTGTGCCATACTA GGATGGCGGGACTGCATGCCAGTTAGAGTAATTGGATTCTCCTCTCTGGA AAGGCAAGATGATCGGGTCGATTTGCCGTAAGCGTTTGTAGGATTGATCG TGGTTGGGTCTACTTGCCTTCCCTCAAGGTTTTGAGTTGGTCTAAATTGT TCCGGTTCGTCTAAGTGTTCGGGTTAGACTTGGTCTTAGTTGGGTCTCAA GGTCAGGCTTAGGCTTTGGCTCTCAGCAGATTAATCGACGGCAGCGTTGG ACCCGCTTTGATCATTTGGAAAAATTGGTGGTTAAATCTCTCTGCGATCT TTGTCTAGTTCACACAACAAAACAGAACAAAAACACGCAACACGAAACAA AACAAAACAAAACAAGACGTGTGTTTCCGAGTTGTTACGAGGGGCTAAAA TATGAAATACAACATACACGTCTACATTGTTGCTGCTTCTTTTTGCGACT GCACCGTAGATACTCTGAAGACCTCCTTTGCGGTCAGATTAATTAGATCA ATAGTTAACGATGTGTTTCTCAATGACTTGGTGCGTTTCTTGTGTACTTT TTTCTTGGAATGTGCATTTAAGAACGGTCGCCACTCTATTTGTTGTGGTT CGTCCCGCGAATAATCTATGTGCATCCTTTAATAAAACGAAAATTTCAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig902:49053..53701+

>mRNA_P-littoralis_Contig902.10.3 ID=mRNA_P-littoralis_Contig902.10.3|Name=mRNA_P-littoralis_Contig902.10.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1233bp|location=Sequence derived from alignment at P-littoralis_Contig902:49053..53701+ (Pylaiella littoralis U1_48)
ATGACGGTGCTTTCTCTCTGCGTTTTCTCTCTGCTGTGCTCCCGATTGCA
CCCCGCTTCAGCATGGACAACCCGGCCATCATTGCAACATGCACGCCACG
TTTCCTACACGCGATCCCTGGACAGCACCAGTAGCAGTAGCAGCAGCAGC
AGCAGCAGCAACAACAGCGGCAGCGGCAGCAGTAGACCTACATCCTGCCA
CACTGCTGCTCCTGGGGACAGTAGTGTTTTTTTTCCCGGCGGATGGAGAG
CACCGCTAGCGCATGCTTTCCTCAGCAGCAGTCGCACCAGCAGCAGGAAT
TTGGCAACGGCAATCTCACTGACGTCAACCGACAAAGAGGCGGAGGGCGG
TGCTGTAGGGTACAAGGTCGACCGGGCGGGAAGGTGCAGCGGCGTGGAGG
CTCTGCCGCCGTTGAAGAACAGGTACTACGCCTTGAGGCATGGTCAGAGC
GTCGCCAACATGGAGGGCATCATCTCCTCCGACCCCGAGGTCGGGTCTGT
CAAGCACGGCCTCACCTCGAACGGGCGCTCGCAGGCCAGAATAGCCGCCA
CCGCGTTAATAGAAGTGGTGGGACGCAACAGGCTGGACTCACTGGTGTTC
GTTTCGAGCGATTTTCTGCGCGCGCGACAAACCGCAGAGGAGTGCCGCGC
GGCCCTTCAGAATATAATCTCCTTCGAAAACCAAGCGATGACAGACGCAA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
GGCGGCGGCGGCGGCGAAGAGAGTGATGAAACGCCCGCCGATGGTCCGGA
AACCCAGGAAGGCGGCGGTGGGGTATCGTTGGACGAGGGGACTGTCGGCG
GGTACGATGTCTCTCCTCCGATCGTGATCCGGAAGGAGCTGAGAGAGAGG
TGGTTCGGGGAGCTGGAAGGGACGATTCTTGTGAACTATAACAAGGTTTG
GCCAGAGGATCTGAAGGATGGAGCGCAGGAGGGATACGGCGTTGAGAGCG
TGTGTGACGTGGCGTCACGAGTCGGGCGGCTCGTTCGGTCTCTCGAGGGA
GAGTATGAGGATGCAGACATCGTTTTCTCTTCGCACGCGGACACCCTCCA
GATCGCACAATGCCACATAGCCGGAGCCGACGAGCGCCTATTTTCCCAGT
ACCGGTTCAAGAACGGAGAAGTGAGAAGATGTCTCCAGGATCCTGCTTCA
CTCCCGCCACCAGCCCCGCTGTCGTTCCAATAG
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