mRNA_P-littoralis_Contig901.3.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig901.3.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 260 bits (665), Expect = 1.410e-83 Identity = 127/129 (98.45%), Postives = 128/129 (99.22%), Query Frame = 1
Query: 4 QWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNTSGHNLDSSSVGTKDLNDKPQVEAAHAVLKRKLTT 390
+WRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNTSGHNLDSSSVGTKDLNDKPQVEAAHA LKRKLTT
Sbjct: 305 KWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNTSGHNLDSSSVGTKDLNDKPQVEAAHAELKRKLTT 433
BLAST of mRNA_P-littoralis_Contig901.3.1 vs. uniprot
Match: A0A6H5JZL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZL5_9PHAE) HSP 1 Score: 182 bits (462), Expect = 1.290e-56 Identity = 92/130 (70.77%), Postives = 103/130 (79.23%), Query Frame = 1
Query: 7 WRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNT--SGHNLDSSSVGTKDLNDKPQVEAAHAVLKRKLTT 390
W++LIEPSKYPLSE DLLF KRLESVRKDVECFFGILK RFRILKLAM YQ QER+D VFFTCCILHNMLHT DGM L E+ NW+ SA + T + D SVGTKD+ND+PQ+E H V KR+LTT
Sbjct: 18 WQILIEPSKYPLSENDLLFLKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWISSAGVGATLATEPEADCGSVGTKDVNDQPQLEIGHTVRKRQLTT 147
BLAST of mRNA_P-littoralis_Contig901.3.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 185 bits (470), Expect = 3.700e-56 Identity = 95/131 (72.52%), Postives = 105/131 (80.15%), Query Frame = 1
Query: 4 QWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNTS--GHNLDSSSVGTKDLNDKPQVEAAHAVLKRKLTT 390
+W++LIEPSKYPLSE DLLFSKRLESVRKDVECFFGILK R RIL LAM +Q QER+D VFFTCCILHNMLHT DGM L E+ NWV SA + TS DS SVGTKD+N +PQVEA HAV KR+LTT
Sbjct: 136 KWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTSVTEPEADSGSVGTKDVNGRPQVEAGHAVRKRQLTT 266
BLAST of mRNA_P-littoralis_Contig901.3.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE) HSP 1 Score: 184 bits (467), Expect = 2.900e-55 Identity = 93/131 (70.99%), Postives = 104/131 (79.39%), Query Frame = 1
Query: 4 QWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNT--SGHNLDSSSVGTKDLNDKPQVEAAHAVLKRKLTT 390
+W++LIEPSKYPLSE DLLFSKRLESVRKDVECFFGILK RFRILKLAM YQ QER+D VFFTCCILHNMLHT DGM L E+ NWV SA + T + D S GTKD+ND+PQ+E H V KR+LTT
Sbjct: 181 KWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTLATEPEADCGSFGTKDVNDQPQLEIGHTVRKRQLTT 311
BLAST of mRNA_P-littoralis_Contig901.3.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 180 bits (457), Expect = 1.310e-52 Identity = 93/131 (70.99%), Postives = 104/131 (79.39%), Query Frame = 1
Query: 4 QWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNT--SGHNLDSSSVGTKDLNDKPQVEAAHAVLKRKLTT 390
+W++LIEPSKYPLSE DLLFSKRLESVRKDVECFFGILK RFRILKLAM YQ QER+D VFFTC ILHNMLHT DGM L E+ NWV SA + T + D SVGTKD+ND+PQ+E H V KR+LTT
Sbjct: 291 KWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSAGVGATLTTEPEADCGSVGTKDVNDQPQLEIEHTVRKRQLTT 421
BLAST of mRNA_P-littoralis_Contig901.3.1 vs. uniprot
Match: A0A6H5JXJ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXJ4_9PHAE) HSP 1 Score: 152 bits (384), Expect = 2.370e-45 Identity = 78/117 (66.67%), Postives = 85/117 (72.65%), Query Frame = 1
Query: 19 IEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQN--TSGHNLDSSSVGTKDLNDKPQVEAAH 363
+EP+KYPLSE D+LFSKRLESVRKDVECFFGILK RFRILKL M Y +QER+D VFFTCCILHNMLH DGM L E+ WV A + DSS VG KD NDK QVE H
Sbjct: 1 MEPTKYPLSENDILFSKRLESVRKDVECFFGILKGRFRILKLVMAYHEQERIDNVFFTCCILHNMLHIFDGMDQLVENTLWVSGAGAGTGVATEQEADSSFVGAKDTNDKEQVEKGH 117
BLAST of mRNA_P-littoralis_Contig901.3.1 vs. uniprot
Match: A0A6H5L0X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0X4_9PHAE) HSP 1 Score: 153 bits (387), Expect = 4.230e-42 Identity = 82/131 (62.60%), Postives = 96/131 (73.28%), Query Frame = 1
Query: 4 QWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNTSGHNL--DSSSVGTKDLNDKPQVEAAHAVLKRKLTT 390
+W++LIEPSKYPLSE DLLFSKRL+SVR+D GILK RFRILKLAM YQ QER+D VFFTCCI+HNMLHT DGM L E+ V SA + T L D SVG +D+ND+PQ+E V KR+LTT
Sbjct: 312 KWQILIEPSKYPLSENDLLFSKRLDSVRRDGSASDGILKGRFRILKLAMAYQSQERIDDVFFTCCIMHNMLHTFDGMDQLVENTIRVSSAGVGATLATELEADCGSVGRRDVNDQPQLEIGRTVRKRQLTT 442
BLAST of mRNA_P-littoralis_Contig901.3.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 152 bits (383), Expect = 4.530e-42 Identity = 76/115 (66.09%), Postives = 88/115 (76.52%), Query Frame = 1
Query: 4 QWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQN--TSGHNLDSSSVGTKDLNDK 342
+W++L+EP+KYPLSE D+LFSKRLESVRKDVECFFGILK FRI K+AM Y +QER+D VFFTCCILHNMLHT DGM L E+ WV SA + DSS+VG KD NDK
Sbjct: 276 KWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLWVSSAGAGTGVATEQEADSSTVGAKDTNDK 390
BLAST of mRNA_P-littoralis_Contig901.3.1 vs. uniprot
Match: A0A6H5JTC6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC6_9PHAE) HSP 1 Score: 144 bits (364), Expect = 9.140e-41 Identity = 71/110 (64.55%), Postives = 83/110 (75.45%), Query Frame = 1
Query: 4 QWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNTSGHN--LDSSSVGTK 327
+W LI PSKYP+ + DL FSKRLESVRKDVECFFGI+K FRILKL++ Y KQE +D VFFTCCILHNMLH++D +EE+ NW G+A L N HN LD SSVG K
Sbjct: 93 KWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGLFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAK 202
BLAST of mRNA_P-littoralis_Contig901.3.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 147 bits (371), Expect = 1.320e-39 Identity = 72/110 (65.45%), Postives = 84/110 (76.36%), Query Frame = 1
Query: 4 QWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNTSGHN--LDSSSVGTK 327
+W LI PSKYP+ + DL FSKRLESVRKDVECFFGI+K RFRILKL++ Y KQE +D VFFTCCILHNMLH++D +EE+ NW G+A L N HN LD SSVG K
Sbjct: 334 KWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAK 443 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig901.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig901.3.1 >prot_P-littoralis_Contig901.3.1 ID=prot_P-littoralis_Contig901.3.1|Name=mRNA_P-littoralis_Contig901.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=130bp MQWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMback to top mRNA from alignment at P-littoralis_Contig901:9240..9629- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig901.3.1 ID=mRNA_P-littoralis_Contig901.3.1|Name=mRNA_P-littoralis_Contig901.3.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=390bp|location=Sequence derived from alignment at P-littoralis_Contig901:9240..9629- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig901:9240..9629- >mRNA_P-littoralis_Contig901.3.1 ID=mRNA_P-littoralis_Contig901.3.1|Name=mRNA_P-littoralis_Contig901.3.1|organism=Pylaiella littoralis U1_48|type=CDS|length=390bp|location=Sequence derived from alignment at P-littoralis_Contig901:9240..9629- (Pylaiella littoralis U1_48)back to top |