prot_P-littoralis_Contig900.31.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig900.31.1
Unique Nameprot_P-littoralis_Contig900.31.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length76
Homology
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BLAST of mRNA_P-littoralis_Contig900.31.1 vs. uniprot
Match: D7G2E5_ECTSI (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2E5_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 2.940e-8
Identity = 23/31 (74.19%), Postives = 27/31 (87.10%), Query Frame = 0 
Query:   46 MWFWAHVGFIHTLGRLALDDTPTHLPTRDIF 76
            MWFWAH+GFI+T+GRL +DDT T LP RDIF
Sbjct:    1 MWFWAHIGFIYTVGRLPIDDTATPLPARDIF 31
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BLAST of mRNA_P-littoralis_Contig900.31.1 vs. uniprot
Match: A0A6H5JS57_9PHAE (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS57_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 5.640e-8
Identity = 28/58 (48.28%), Postives = 41/58 (70.69%), Query Frame = 0 
Query:   18 LRLKERIARKNRALAFLQLRTAAALHSQMWFWAHVGFIHTLGRLALDDTPTHLPTRDI 75
            LR+++RIARK RAL  +Q + + +L++ MWF +H   I+TLGRLA+DD PT    R +
Sbjct:   50 LRIRDRIARKKRALLPMQWQQSYSLYTSMWFASHFAVIYTLGRLAIDDIPTGAARRHV 107
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig900.31.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G2E5_ECTSI2.940e-874.19DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JS57_9PHAE5.640e-848.28DDE Tnp4 domain-containing protein n=4 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 17..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig900contigP-littoralis_Contig900:88861..89088 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig900.31.1mRNA_P-littoralis_Contig900.31.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig900 88861..89090 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig900.31.1 ID=prot_P-littoralis_Contig900.31.1|Name=mRNA_P-littoralis_Contig900.31.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=76bp
RKAALLFQSRGCVIMARLRLKERIARKNRALAFLQLRTAAALHSQMWFWA
HVGFIHTLGRLALDDTPTHLPTRDIF
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