mRNA_P-littoralis_Contig900.28.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig900.28.2
Unique NamemRNA_P-littoralis_Contig900.28.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig900.28.2 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE)

HSP 1 Score: 224 bits (572), Expect = 8.330e-62
Identity = 145/378 (38.36%), Postives = 196/378 (51.85%), Query Frame = 1
Query:   34 KLEVLKFSRLTCGDGHPVGRRGAGKVFGIDKKLIRDWESQEAELVA-FSKKENASKQRSLHTGREADTKEVEVAIVDEINTPRKNGAAVTRDLVMAKLLSEMPTFSGGMPSEDEPEKMEKFQKRFNARYYRFLKRHRFSIQRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLV 996
            KL+V+ F+R+ C DG P G  GA KV  + ++ I +W   E  L A  S     SK + +H   +A   ++E A+V+ IN  RK+         M KLL   P   GG+ ++ +PE+      +F + Y RF KR++FSI+R+TSVGQK P+G EG AWA + KLR +L E A E                               +F  L NMDQTP+Q EMP +TT+E TG K A I TGG+ EK R+T+ LAV  DG+KV  RII+KG PFV                           +  G P GG+S GVQ+ SWCD  +   W+   +  RP  GS  R QR  +LVLDDF+CH+++ F   L   A T+V
Sbjct:   61 KLKVVAFTRVVCEDGKPGGNSGAAKVLDVPRRRIVEWVRDEESLRAKVSANPKLSKAKQIHARGKASRADIEEALVEFINDQRKHHVGCGSMAAMNKLLELKPDALGGLAAKPKPEEALALNSKFKSWYQRFCKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGK-EKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVR-QRRCILVLDDFKCHKDDGFIAALKREANTIV 436          
BLAST of mRNA_P-littoralis_Contig900.28.2 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE)

HSP 1 Score: 216 bits (549), Expect = 1.770e-60
Identity = 150/400 (37.50%), Postives = 201/400 (50.25%), Query Frame = 1
Query:    7 GRCAYENAEKLEVLKFSRLTCG-DGHPVGRRGAGKVFGIDKKLIRDWESQEAEL-VAFSKKENASKQRSLHTGREADTKEVEVAIVDEINTPRKNGAAVTRDLVMAKLLSEMPTFSGGMPSEDEPEKMEKFQKRFNARYYRFLKRHRFSIQRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV---------------------------------GGTNNFGYPA----GGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLV 996
            G+ +Y    KL    ++R  C  DG PVG  GA  V  +  K I +W  QE +L    S     SK + +H+G +A T + E A+VD +N  RK         VM KLL   P   GGM +  +PE+   F+ +FN+ Y RF KR+ FSI+R+TSVGQK P+G+EG AWA + KLR +L + A E                               +F  L NMDQTP+Q EMP +TT+EKTG K A I+TGGE EK R+T+VLAV  DG+KV PRII+KG PF+                                 GG  N   P     G   +   + SW D  + + W+   +  RP + S   QRP +LVLDDF+CH++E F   L   AKT++
Sbjct:   79 GKGSYPIRFKLNAATYTRKICPCDGQPVGNNGAAIVLQVPWKRIIEWLKQEEQLREKVSANPKLSKAKQVHSGGKASTVDAEQALVDYMNEQRKQHRDCGNREVMNKLLELKPDALGGMSTNAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGE-EKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKVKSTLPRKNSVAWEIHSANXARSGCHGGRQNDVSPRIIFKGTPFIPPTEKSWSDQRECNGWIPGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRGAKTVI 477          
BLAST of mRNA_P-littoralis_Contig900.28.2 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE)

HSP 1 Score: 212 bits (539), Expect = 1.580e-59
Identity = 142/367 (38.69%), Postives = 190/367 (51.77%), Query Frame = 1
Query:   16 AYENAEKLEVLKFSRLTCGDGHPVGRRGAGKVFGIDKKLIRDWESQEAELVAFSK-KENASKQRSLHTGREADTKEVEVAIVDEINTPRKNGAAVTRDLVMAKLLSEMPTFSGGMPSEDEPEKMEKFQKRFNARYYRFLKRHRFSIQRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCH 945
            +Y    KL+ + F+R+ C DG PVG  GA KV  +D++ I  W  +EA +    K K   SK +S+H G    T EVE  + D IN  R+         VM KLL   P   GG+ +    E+   F+ +F   Y+RF +RH  SI+R+TSVGQK P G+EG A+A + KLR++L E A E                               +F  L NMDQTP+Q EMP +TT+EK G K A I+TGG+ EK R+T+ LAV  DG KV  RII+KG PF+                            NFGYP  G+S GVQ+ SW D  +   W+++ +  RP  GS  + QR S+LVLDDFR +
Sbjct:   74 SYPMRFKLKAVAFTRVLCEDGQPVGNSGAAKVLAVDRRRIITWVGEEATMKNLVKEKPKLSKAKSIHAGVAPPTAEVEQDLEDYINEQRREHRGCGSMEVMNKLLELKPDALGGLTAAASAEETLAFRTKFKNWYHRFRERHGLSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLSPAQLESVATEVFEELGNMDQTPVQQEMPVETTLEKGGAKDARISTGGK-EKERFTLCLAVMADGGKVPLRIIFKGKPFIPPSTARRGKNTQPRKGSIAAEVLPANQTNFGYPVSGMSFGVQERSWYDACECTLWLSESWGFRPNHGSVIK-QRHSILVLDDFRTN 438          
BLAST of mRNA_P-littoralis_Contig900.28.2 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 211 bits (537), Expect = 1.260e-58
Identity = 138/365 (37.81%), Postives = 191/365 (52.33%), Query Frame = 1
Query:   73 DGHPVGRRGAGKVFGIDKKLIRDWESQEAEL-VAFSKKENASKQRSLHTGREADTKEVEVAIVDEINTPRKNGAA-VTRDLVMAKLLSEMPTFSGGMPSEDEPEKMEKFQKRFNARYYRFLKRHRFSIQRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLV 996
            DG PVG  GA KV  + +K I +W   EA+L    S     SK + +H+G +  T + E      ++      A  +    VM KLL   P   GGMP+  +PE+   F+ +FN+ Y RF KR+ FSI+R+TSVGQK P+G+EG AWA + KL  +L + A E                               +F  + NMDQ P+Q EMP +TT++KTG K A I+TGG  EK R+T+VLAV  DG+KV PRII++G PF+  T +                         G+PA G+S GVQ+ SW D  + + W++  +  RP + S   QRP +LVLDDF+CH +E F   L   A T+V
Sbjct:  113 DGQPVGNNGAAKVLQVPRKRIIEWLKPEAQLREKVSANPKLSKAKQVHSGGKVSTVDAEQPFPCGLHQRATQAAPRLGNREVMNKLLELKPDALGGMPANAKPEEAIDFKFKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLCEALVKRAGEIYARRHPPAPDESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIV 477          
BLAST of mRNA_P-littoralis_Contig900.28.2 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 2.350e-55
Identity = 140/369 (37.94%), Postives = 192/369 (52.03%), Query Frame = 1
Query:   85 VGRRGAGKV-FGIDKKLIRDWESQEAEL-VAFSKKENASKQRSLHTGREADTKEVEVAIVDEINTPRKNGAAVTRDLVMAKLLSEMPTFSGGMPSEDEPEKMEKFQKRFNARYYRFLKRHRFSIQRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDF--------MRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLV 996
            VG +G+  +   + +K I +W  QE +L    S     SK + +H+G +A T + E A+VD IN  RK         VM KLL   P   GGMP+  +PE+   F+ +FN+ Y RF KR+ FSI+R+ SVGQK P+G+EG AWA + KLR +L + A E                               +F  L NMDQTP+Q EMP +TT+E TG K A I+TGG+ EK R+T+VLAV  DG+ V P II+KG PF+  T +                         G+PA G+S GVQ+ SW    + + W+   +        M RP + S   QRP +LVLDDF+CH++E F   L   A T+V
Sbjct:   77 VGGKGSYPIRLQVPRKRIIEWLKQEGQLREKVSANPKLSKAKQVHSGGKASTVDAEQALVDYINEQRKLHRGCGNREVMNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRASVGQKLPKGYEGMAWATVTKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGK-EKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIV 444          
BLAST of mRNA_P-littoralis_Contig900.28.2 vs. uniprot
Match: A0A6H5K583_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K583_9PHAE)

HSP 1 Score: 202 bits (513), Expect = 6.800e-54
Identity = 140/378 (37.04%), Postives = 184/378 (48.68%), Query Frame = 1
Query:   34 KLEVLKFSRLTCGDGHPVGRRGAGKVFGIDKKLIRDWESQEAELVAFSK-KENASKQRSLHTGREADTKEVEVAIVDEINTPRKNGAAVTRDLVMAKLLSEMPTFSGGMPSEDEPEKMEKFQKRFNARYYRFLKRHRFSIQRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLV 996
            KL   +F+R+ C DG PVG  GA KV G+D++ +  W  +EA +    K K   SK +S+H G    T EVE  + D IN       A +   ++A                        F+ +F   Y+ F +RH FSI+R+TSVGQK P G+EG A+A + KLR++L E A E                               +F  L NMDQTP+Q EMP +TT+EK G K A I+TGG+ EK R+T  LAV  DG KV  RII+KG PF+                             FGYP  G+   VQ+ SWCD  +   W+++ +  RP  GS  + QR S+LVLDDFRCHR E F K L     T V
Sbjct:    4 KLTAAEFTRVLCEDGQPVGNSGAAKVLGVDRRRVITWIGEEATMKKLVKEKPKLSKAKSIHVGMAPTTAEVEQDLEDCINEQ----LAASAGEILA------------------------FRTKFKNWYHCFRERHGFSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLTPAQLESVAAKVFEELGNMDQTPVQQEMPVETTLEKRGVKDARISTGGK-EKDRFTPCLAVMADGGKVPQRIIFKGKPFIPPSTAGREKNTQTRKGYIAAEVLLANRTKFGYPVSGMFFVVQEKSWCDARECTLWLSESWRFRPNHGSVIK-QRHSILVLDDFRCHRSESFVKDLRRRTNTTV 351          
BLAST of mRNA_P-littoralis_Contig900.28.2 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 3.530e-51
Identity = 118/283 (41.70%), Postives = 157/283 (55.48%), Query Frame = 1
Query:  313 MAKLLSEMPTFSGGMPSEDEPEKMEKFQKRFNARYYRFLKRHRFSIQRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLV 996
            M KLL   P   GGMP+  +PE+   F+ +FN+ Y RF KR+ FSI+R+TSVGQK P+G EG AWA + KLR +L + A E                               +F  L NMDQTP+Q E+P +TT+EKTG K A I+TGG+ EK R+T+VLAV  DG+KV PRII+KG PF   T +                         G+PA G+S GVQ+ SW D  + + W++  +  RP + S   QRP +LVLDDF+CH++E F   L   A T+V
Sbjct:    1 MNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIV 282          
BLAST of mRNA_P-littoralis_Contig900.28.2 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 2.580e-50
Identity = 134/369 (36.31%), Postives = 179/369 (48.51%), Query Frame = 1
Query:  133 IRDWESQEAELVAFSKKENASKQRSLHTGREADTKEVEVAIVDEINTPRKNGAAVTRDLVMAKLLSEMPTFSGGMPSEDEPEKMEKFQKRFNARYYRFLKRHRFSIQRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGET-------------------------EKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLV 996
            +RD ES  A + A  K    SK + +H G +A T ++E A+V+ IN  RK+        VM KLL   P   GG+ ++ +PE+   F+ +F + Y RF KR++FSI+R+TSVG + P+G EG AWA + KLR +L E A E                               +F  L NMDQTP+Q EMP +TT+EKTG K A I TG                            EK R+T+ LAV  DG KV  RII+KG PFV                           +  G P GG+S GVQ+ SWCD  +   W+   +  RP  GS  R QR  +LVLDDF+CH+++ F   L   A T+V
Sbjct:   31 VRDEESLRANVSANPK---LSKAKQIHAGGKASTADIEEALVEFINDQRKHHVGCGSMAVMNKLLELKPDTLGGLTAKPKPEEALAFKSKFKSWYQRFRKRNKFSIRRRTSVGIRLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVR-QRRCILVLDDFKCHKDDGFIAALKREANTIV 395          
BLAST of mRNA_P-littoralis_Contig900.28.2 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 7.390e-49
Identity = 113/283 (39.93%), Postives = 152/283 (53.71%), Query Frame = 1
Query:  313 MAKLLSEMPTFSGGMPSEDEPEKMEKFQKRFNARYYRFLKRHRFSIQRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLV 996
            M KLL   P   GGM +  +P +   F+ + N+ Y RF KR+ FSI+R+TSVGQK P+G+EG AWA + KLR +L   A E                               +F  L NMDQTP+Q EMP +TT+EKTG K A I+TGG+ EK R+T+VLAV  DG+KV PRII+KG PF+                               +PA G+S GVQ+ SW D  + + W++  +  RP + S   QRP +LVLDDF+CH++E +   L   A T+V
Sbjct:    1 MNKLLELKPNALGGMSANAKPTEALAFKVKINSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVRRAGEIYARRHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIV 282          
BLAST of mRNA_P-littoralis_Contig900.28.2 vs. uniprot
Match: A0A6H5KEE8_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE8_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 6.010e-46
Identity = 127/384 (33.07%), Postives = 173/384 (45.05%), Query Frame = 1
Query:   16 AYENAEKLEVLKFSRLTCGDGHPVGRRGAGKVFGIDKKLIRDWESQEAELVA-FSKKENASKQRSLHTGREADTKEVEVAIVDEINTPRKNGAAVTRDLVMAKLLSEMPTFSGGMPSEDEPEKMEKFQKRFNARYYRFLKRHRFSIQRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLV 996
            +Y    KL+ + F+R+ C DG PVG  GA KV  + ++ I +W   E  L A  S     SK + +H G +A T ++E A+V+ IN  RK+       L                           F+ +F + Y RF KR++F+I+R+TSVGQK P+G EG AWA + KLR +L E A E                               +F  L NMDQTP+Q E                    G  EK R+T+ LAV  DG+KV  RII+KG PFV                           +  G P  G+S GVQ+ SWCD  +   W+   +  RP  GS  R QR  +LVLDDF+CH+++ F   L   A T+V
Sbjct:   68 SYPVGFKLKAVAFTRVVCEDGKPVGNSGAAKVLDVPRRRIVEWVRDEESLRANVSANPKLSKAKQIHAGGKASTADIEEALVEFINDQRKHHVGCEEALA--------------------------FKSKFKSWYQRFRKRNKFNIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHERD-----------------AGGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVEGMSFGVQEKSWCDLRECKLWIKGSWKLRPNNGSIVR-QRRCILVLDDFKCHKDDGFIAALKREANTIV 407          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig900.28.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K8Y4_9PHAE8.330e-6238.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRZ8_9PHAE1.770e-6037.50DDE-1 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5JQM5_9PHAE1.580e-5938.69DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JHT8_9PHAE1.260e-5837.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTG5_9PHAE2.350e-5537.94DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K583_9PHAE6.800e-5437.04Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K6L9_9PHAE3.530e-5141.70DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KE45_9PHAE2.580e-5036.31DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JUK2_9PHAE7.390e-4939.93DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KEE8_9PHAE6.010e-4633.07DDE-1 domain-containing protein n=2 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig900contigP-littoralis_Contig900:85915..87750 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FXD3
Preferred namePOGK
PFAMsBrkDBD,DDE_1,HTH_Tnp_Tc5,KRAB
Model size1144
Max annot lvl2759|Eukaryota
KEGG koko:K09228
Hectar predicted targeting categoryother localisation
Exons4
Evalue2.63e-33
EggNOG OGsKOG3105@1|root,KOG3105@2759|Eukaryota
DescriptionDNA binding
Cds size750
COG categoryCH
BRITEko00000,ko03000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig900.28.2prot_P-littoralis_Contig900.28.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig900 86227..87668 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791809.4147632-UTR-P-littoralis_Contig900:85914..862261680791809.4147632-UTR-P-littoralis_Contig900:85914..86226Pylaiella littoralis U1_48UTRP-littoralis_Contig900 85915..86226 +
1680791809.4863036-UTR-P-littoralis_Contig900:87668..877501680791809.4863036-UTR-P-littoralis_Contig900:87668..87750Pylaiella littoralis U1_48UTRP-littoralis_Contig900 87669..87750 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791809.4314108-CDS-P-littoralis_Contig900:86226..864721680791809.4314108-CDS-P-littoralis_Contig900:86226..86472Pylaiella littoralis U1_48CDSP-littoralis_Contig900 86227..86472 +
1680791809.4427912-CDS-P-littoralis_Contig900:86577..866941680791809.4427912-CDS-P-littoralis_Contig900:86577..86694Pylaiella littoralis U1_48CDSP-littoralis_Contig900 86578..86694 +
1680791809.454609-CDS-P-littoralis_Contig900:87212..873161680791809.454609-CDS-P-littoralis_Contig900:87212..87316Pylaiella littoralis U1_48CDSP-littoralis_Contig900 87213..87316 +
1680791809.473075-CDS-P-littoralis_Contig900:87385..876681680791809.473075-CDS-P-littoralis_Contig900:87385..87668Pylaiella littoralis U1_48CDSP-littoralis_Contig900 87386..87668 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig900.28.2

>prot_P-littoralis_Contig900.28.2 ID=prot_P-littoralis_Contig900.28.2|Name=mRNA_P-littoralis_Contig900.28.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=250bp
MAKLLSEMPTFSGGMPSEDEPEKMEKFQKRFNARYYRFLKRHRFSIQRKT
SVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAIFALLYNMDQTPIQAEMP
PDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPF
VGGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSRDQRP
SVLVLDDFRCHREERFQKKLMDLAKTLVGGDAWWRADPGVPAARPEHQQ*
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mRNA from alignment at P-littoralis_Contig900:85915..87750+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig900.28.2 ID=mRNA_P-littoralis_Contig900.28.2|Name=mRNA_P-littoralis_Contig900.28.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=1836bp|location=Sequence derived from alignment at P-littoralis_Contig900:85915..87750+ (Pylaiella littoralis U1_48)
AAGAGCGGGCGGTGCGCATACGAGAACGCGGAGAAGCTCGAGGTGCTGAA GTTCAGCCGGCTAACGTGTGGTGATGGGCACCCAGTCGGAAGGCGTGGTG CGGGGAAGGTGTTCGGCATCGACAAGAAGCTGATCCGGGACTGGGAGAGC CAGGAGGCAGAGCTTGTGGCGTTTTCGAAGAAGGAGAACGCAAGCAAGCA GCGGTCGTTGCACACTGGACGCGAGGCTGACACGAAGGAGGTGGAGGTGG CCATAGTGGACGAGATCAACACGCCCAGGAAAAACGGTGCTGCTGTGACC CGGGACCTCGTCATGGCCAAGCTTCTCTCCGAGATGCCAACCTTTTCAGG GGGCATGCCGTCCGAAGACGAGCCGGAGAAGATGGAAAAATTTCAGAAGC GTTTCAACGCCCGGTACTACAGGTTCCTCAAGAGGCACCGGTTCTCGATC CAACGCAAGACGAGCGTGGGGCAGAAGAAGCCGGAAGGATGGGAGGGCAA GGCGTGGGCATTCATCCAGAAGCTTCGCTCAAGCCTGCGTGAGCACGCGC AGGAAGCCGTTCTCTTGGAGAGGGCAGCCCAGGCAGCGAAGGACGGAGGG ACCGTTGAGATCGAGATGGACGTCATCGCAACTGCGGAGGAACTTCTGGC TGTTCAGGGCAAGATCTTCGCCCTTCTGTACAACATGGACCAGACCCCGA TCCAGGCTGAGATGCCGCCGGACACCACGGTGGAGAAGACTGGTACGAAG AGCGCTTGCATCACGACAGGAGGTGAGACGGTGTACTAAAGGTATTTCGA TTGTTGAAATTCAGTTCAAACCAACATGGTGGAGATTTTCTGACGATGGA ACAAGCGGGGAATTACAAATTTGCCGACGGCGGAAAAACGGGGAATTATA ATATTTTGAATTGCTTCTGCCGTCACGTGCACGCTTTCGTTCTTCTATTG CCTGCAAGTACGGTACGTACTGCTGTATCGCCTGTCCCTTCGAACTACCG GTACACAGCGATGAAATTATTCATATGGTATTCCGCTGAAGTATTTTTTT TAATATACATATGTTTTGGGGGCAATATATATTTTACCGTATACACCGGA GTTTGTTTTATTTTACTTTTTATGTTGTGGTAGGCATTACACCCCAGGAG TTAAAGGTGTGTGTTTGTTTTTTATTATTATTTATTTTTTGTTTGTTGTG GCAGGCAATACGATTAATAACTGTACTGCTTTGCGGAGTATTTTCTTTTA ACACAATTTCCTTTGTTTGCATACGCCCCAATTTTCGCACCAGGCAAGGA GAAGCTGCGGTACACCGTGGTGCTAGCTGTCCGGGGTGATGGACAGAAGG TGCGGCCGCGCATCATCTACAAGGGGAACCCTTTTGTCGGGGGTACCAAC AAGTCAGGCTCAGCCAAGAAGCCTGGCAAGAACAGCCTTTCGTACGAGCA CCTCCCAGACAAGCGGACGAGCTTCGGCTACCCGGCTGGCGGCATCAGCC TCGGGGTGCAGAAGTCGTCGTGGTGCGACGGCACCCAGTCCGACGAGTGG GTAACCCAGGACTTCATGCGCCGCCCAGGGTCTACCTCCAGAGATCAGCG TCCCAGCGTTCTCGTGCTCGACGACTTCAGGTGCCACCGGGAAGAGAGGT TCCAAAAGAAGCTAATGGACCTGGCCAAGACGCTGGTTGGTGGTGATGCT TGGTGGAGGGCTGACCCCGGTGTGCCAGCCGCTCGACCGGAACATCAACA ATGAGTTCAAGCGAGGTGTTCGGGCCAGGTACACCAGCTGGATCCGGGAC AACTACGGGCGCTCGGGGCAGAAGGTGACCGCGCCG
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Coding sequence (CDS) from alignment at P-littoralis_Contig900:85915..87750+

>mRNA_P-littoralis_Contig900.28.2 ID=mRNA_P-littoralis_Contig900.28.2|Name=mRNA_P-littoralis_Contig900.28.2|organism=Pylaiella littoralis U1_48|type=CDS|length=750bp|location=Sequence derived from alignment at P-littoralis_Contig900:85915..87750+ (Pylaiella littoralis U1_48)
ATGGCCAAGCTTCTCTCCGAGATGCCAACCTTTTCAGGGGGCATGCCGTC
CGAAGACGAGCCGGAGAAGATGGAAAAATTTCAGAAGCGTTTCAACGCCC
GGTACTACAGGTTCCTCAAGAGGCACCGGTTCTCGATCCAACGCAAGACG
AGCGTGGGGCAGAAGAAGCCGGAAGGATGGGAGGGCAAGGCGTGGGCATT
CATCCAGAAGCTTCGCTCAAGCCTGCGTGAGCACGCGCAGGAAGCCATCT
TCGCCCTTCTGTACAACATGGACCAGACCCCGATCCAGGCTGAGATGCCG
CCGGACACCACGGTGGAGAAGACTGGTACGAAGAGCGCTTGCATCACGAC
AGGAGGTGAGACGGAGAAGCTGCGGTACACCGTGGTGCTAGCTGTCCGGG
GTGATGGACAGAAGGTGCGGCCGCGCATCATCTACAAGGGGAACCCTTTT
GTCGGGGGTACCAACAACTTCGGCTACCCGGCTGGCGGCATCAGCCTCGG
GGTGCAGAAGTCGTCGTGGTGCGACGGCACCCAGTCCGACGAGTGGGTAA
CCCAGGACTTCATGCGCCGCCCAGGGTCTACCTCCAGAGATCAGCGTCCC
AGCGTTCTCGTGCTCGACGACTTCAGGTGCCACCGGGAAGAGAGGTTCCA
AAAGAAGCTAATGGACCTGGCCAAGACGCTGGTTGGTGGTGATGCTTGGT
GGAGGGCTGACCCCGGTGTGCCAGCCGCTCGACCGGAACATCAACAATGA
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