mRNA_P-littoralis_Contig90.146.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig90.146.1 vs. uniprot
Match: D7FLR6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLR6_ECTSI) HSP 1 Score: 336 bits (862), Expect = 2.280e-102 Identity = 160/195 (82.05%), Postives = 174/195 (89.23%), Query Frame = 1
Query: 472 LPKIGVRVAHDTGRGVTVDYSARGFETDPKTLLTFGQGTIGGAQKGARKLLAIDSEEDLRLKTPEVAVTTEDDTTIFVRLNDAAVLAARSETLFEKGSWLHNNVIGLAWVSSRGLSLVRTKEGTTRGGEPWVWFVTVIDNWNYCWSGPGFVMFVTHNWCFTGYKNLKRHDRKGANKMEVGRSADFSTPSAKGRAN 1056
L KIGVRVA DTGRGV VDY ARGFE+DPK+LLTF +GTIGGAQ GARKLLAIDSEED+RLKTPEVA T ++ +FVRLNDAAVLAARSETLF+KGSWL+ NV+GLAWV RGLSLVRTKEGTTRGG PWVW VTVIDNW YCWSGPGFV+F+THNWCF GYKNLK HDRKGAN+MEVGRS DFSTPSAKG+ N
Sbjct: 229 LSKIGVRVASDTGRGVNVDYGARGFESDPKSLLTFNRGTIGGAQNGARKLLAIDSEEDVRLKTPEVAANTVEEKRMFVRLNDAAVLAARSETLFKKGSWLNKNVVGLAWVQGRGLSLVRTKEGTTRGGNPWVWLVTVIDNWEYCWSGPGFVVFMTHNWCFAGYKNLKEHDRKGANQMEVGRSGDFSTPSAKGKVN 423
BLAST of mRNA_P-littoralis_Contig90.146.1 vs. uniprot
Match: A0A6H5L5E5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E5_9PHAE) HSP 1 Score: 314 bits (804), Expect = 7.910e-95 Identity = 149/193 (77.20%), Postives = 169/193 (87.56%), Query Frame = 1
Query: 472 LPKIGVRVAHDTGRGVTVDYSARGFETDPKTLLTFGQGTIGGAQKGARKLLAIDSEEDLRLKTPEVAVTTEDDTTIFVRLNDAAVLAARSETLFEKGSWLHNNVIGLAWVSSRGLSLVRTKEGTTRGGEPWVWFVTVIDNWNYCWSGPGFVMFVTHNWCFTGYKNLKRHDRKGANKMEVGRSADFSTPSAKGR 1050
LPKIGVRVAHD G G VDYS RGFE+DPK+LLTFG GTIGGAQ GARKL+A+DSEED RLKTP VA TT D TT+F+RLNDAAV AARSETLF+KGSWL+ NV+GLAWV RGLSLVRT+EGTTRGGEPWV+ VTVIDNW +CWSGPGF++FVT CF+GYKNLK HD++GA +MEVGRS DFSTP+AKG+
Sbjct: 242 LPKIGVRVAHDIGGGANVDYSTRGFESDPKSLLTFGGGTIGGAQNGARKLVALDSEEDFRLKTPGVAATTVDHTTMFLRLNDAAVFAARSETLFDKGSWLNKNVVGLAWVRRRGLSLVRTREGTTRGGEPWVYLVTVIDNWEHCWSGPGFLLFVTQQGCFSGYKNLKEHDKEGARQMEVGRSGDFSTPAAKGK 434
BLAST of mRNA_P-littoralis_Contig90.146.1 vs. uniprot
Match: D7G6J6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6J6_ECTSI) HSP 1 Score: 228 bits (580), Expect = 3.930e-63 Identity = 126/242 (52.07%), Postives = 157/242 (64.88%), Query Frame = 1
Query: 472 LPKIGVRVAHDTGRGVTVDYSARGFETDPKTLLTFGQGTIGGAQKGARKLLAIDSEEDLRLKTPEVAVTTEDDTTIFVRLNDAAVLAARSETLFEKGSWLHNNVIGLAWVSSR-GLSLVRTKEGTTRGGEPWVWFVTVIDNWNYCWSGPGFVMFVTHNWCFTGYKNLKRHDRKGANKMEVGRSADFSTPSAK---------------------------GRANYSGEQKGREKSTKELKADG 1113
+P++ VRV HD+G G VD S R + D K L+TF G IGGAQ+GAR+ + + SEED RL TPEVA TT D+T+ + L DA VL+ARS+TL++ G WL+ NV+GLA V + GLSLV+TKEG+TRGGEPWV+ VTVI NW YCWSGP FV VT CF+GYKNL +HD K MEVGRS DFSTP+ K G NY+ +++G EKST E K +G
Sbjct: 115 VPRLVVRVVHDSGAGKDVDRSGR-VQADDKVLITFDGGVIGGAQRGARRTVVLGSEEDQRLNTPEVAATTVTDSTMIIPLYDAFVLSARSDTLYQTGPWLNKNVVGLAKVRGQHGLSLVKTKEGSTRGGEPWVYLVTVIGNWEYCWSGPFFVAMVTRWGCFSGYKNLGKHD-KTTRGMEVGRSGDFSTPATKAIATLREETVKHAAHQRTIDSGRTPLRGNVNYTAKERGAEKSTNERKGEG 354
BLAST of mRNA_P-littoralis_Contig90.146.1 vs. uniprot
Match: D7FWV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWV7_ECTSI) HSP 1 Score: 228 bits (580), Expect = 8.850e-63 Identity = 126/242 (52.07%), Postives = 157/242 (64.88%), Query Frame = 1
Query: 472 LPKIGVRVAHDTGRGVTVDYSARGFETDPKTLLTFGQGTIGGAQKGARKLLAIDSEEDLRLKTPEVAVTTEDDTTIFVRLNDAAVLAARSETLFEKGSWLHNNVIGLAWVSSR-GLSLVRTKEGTTRGGEPWVWFVTVIDNWNYCWSGPGFVMFVTHNWCFTGYKNLKRHDRKGANKMEVGRSADFSTPSAK---------------------------GRANYSGEQKGREKSTKELKADG 1113
+P++ VRV HD+G G VD S R + D K L+TF G IGGAQ+GAR+ + + SEED RL TPEVA TT D+T+ + L DA VL+ARS+TL++ G WL+ NV+GLA V + GLSLV+TKEG+TRGGEPWV+ VTVI NW YCWSGP FV VT CF+GYKNL +HD K MEVGRS DFSTP+ K G NY+ +++G EKST E K +G
Sbjct: 115 VPRLVVRVVHDSGAGKDVDRSGR-VQADDKVLITFDGGVIGGAQRGARRTVVLGSEEDQRLNTPEVAATTVTDSTMIIPLYDAFVLSARSDTLYQTGPWLNKNVVGLAKVRGQHGLSLVKTKEGSTRGGEPWVYLVTVIGNWEYCWSGPFFVAMVTRWGCFSGYKNLGKHD-KTTRGMEVGRSGDFSTPATKAIATLREETVKHAAHQRTIDSGRTPLRGNVNYTAKERGAEKSTNERKGEG 354
BLAST of mRNA_P-littoralis_Contig90.146.1 vs. uniprot
Match: D7FV88_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV88_ECTSI) HSP 1 Score: 184 bits (466), Expect = 2.340e-48 Identity = 93/153 (60.78%), Postives = 114/153 (74.51%), Query Frame = 1
Query: 1090 TKELKADGGKTRGNMI-QSDHARGGAGIRRRLTLAKHVLRPRPVSVGVPLFKSFKCSKKGCRRWHELGDRWFYDVVQKVWRYVGPVCRPKGGHSAAEMVPCLDAKGKTGAG--QMKELPFVGNSAASTVVRNNQGAYAVWLEEEAVRQEEQRR 1539
T E + GG RG+ +SDH RGGAG+RR +TLA+ +LR RP S +P F+SFKC ++GC + +LGDRWF+D++Q W+YVGP C+PKGGHSAAEMVPC DAKGK G +MK LPFVGNS AS VVR NQ AYA WL E+A R EE+RR
Sbjct: 227 TDEQRERGGAARGSRKGRSDHERGGAGVRRDITLARDILRSRPESTDIPPFESFKCPEEGCGNFLKLGDRWFFDILQNKWKYVGPRCQPKGGHSAAEMVPCSDAKGKEGYSNEEMKMLPFVGNSRASKVVRENQDAYAGWLTEDAARLEEERR 379
BLAST of mRNA_P-littoralis_Contig90.146.1 vs. uniprot
Match: A0A6H5KU43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU43_9PHAE) HSP 1 Score: 184 bits (466), Expect = 1.010e-46 Identity = 102/200 (51.00%), Postives = 126/200 (63.00%), Query Frame = 1
Query: 472 LPKIGVRVAHDTGRGVTVDYSARGFETDPKTLLTFGQGTIGGAQ------KGARKLLAIDSEEDLRLKTPEVAVTTEDDTTIFVRLNDAAVLAARSETLFEKGSWLHNNVIGLAWVS-SRGLSLVRTKEGTTRGGEPWVWFVTVIDNWNYCWSGPGFVMFVTHNWCFTGYKNLKRHDRKGANKMEVGRSADFSTPSAKGR 1050
LPK+G++V HDTG G VDY D K L TFG GTIGG+Q +G+R+ +AI S ED RLK P+VA TT ++T+ V L D VLAAR G W NV+G+A V + LSLV+T+ GTT GGE WV++V NW YCWSGP F++ VT CFTG NL + D++ N MEVGRS D STP KGR
Sbjct: 162 LPKMGLKVVHDTGAGAAVDYDGGVQSGDSKVLWTFGGGTIGGSQNGDSGEEGSRRTVAIGSAEDERLKAPDVAATTVTESTMLVTLYDGVVLAARGI-----GPWFCENVVGVALVGPKKKLSLVKTRGGTTSGGEQWVYYVLAATNWEYCWSGPAFMVLVTQQACFTGKINLWQKDKR-VNHMEVGRSGDLSTPETKGR 355
BLAST of mRNA_P-littoralis_Contig90.146.1 vs. uniprot
Match: A0A6H5L1Q4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Q4_9PHAE) HSP 1 Score: 162 bits (409), Expect = 4.370e-43 Identity = 80/129 (62.02%), Postives = 97/129 (75.19%), Query Frame = 1
Query: 1138 QSDHARGGAGIRRRLTLAKHVLRPRPVSVGVPLFKSFKCSKKGCRRWHELGDRWFYDVVQKVWRYVGPVCRPKGGHSAAEMVPCLDAKGKT--GAGQMKELPFVGNSAASTVVRNNQGAYAVWLEEEAV 1518
+SDH RGGAG+RR++TLA+H+LR RP S VP F+SFKC K+GC H+LGD WF+D++QK +YVGP +P+ GHS AEMVPC DA+GK G +K LPFVGN AS VV NNQ AYAVWL E AV
Sbjct: 23 RSDHERGGAGVRRKITLARHILRSRPASTEVPPFESFKCPKEGCGNVHKLGDWWFFDILQK--KYVGPRSQPRSGHSGAEMVPCSDAEGKEVCGDNDLKTLPFVGNGRASEVVMNNQDAYAVWLTEYAV 149
BLAST of mRNA_P-littoralis_Contig90.146.1 vs. uniprot
Match: A0A6H5L940_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L940_9PHAE) HSP 1 Score: 158 bits (399), Expect = 6.950e-41 Identity = 85/188 (45.21%), Postives = 101/188 (53.72%), Query Frame = 1
Query: 1138 QSDHARGGAGIRRRLTLAKHVLRPRPVSVGVPLFKSFKCSKKGCRRWHELGDRWFYDVVQKVWRYVGPVCRPKGGHSAAEMVPCLDAKGKTGAGQ------------------------------------------------------------MKELPFVGNSAASTVVRNNQGAYAVWLEEEAVR 1521
+SDH RGGAG+RR+ TLA+H+LR RP S VP F+SFKC K+GC H+LGDRWF+D++QK W+YVGP C+P+GGHS AEMVPC DA+GK G MK LPFVGN AS VV NNQ AYAVWL E+A R
Sbjct: 23 RSDHERGGAGVRRKTTLARHLLRSRPASTEVPPFESFKCPKEGCGNVHKLGDRWFFDILQKKWKYVGPRCQPRGGHSEAEMVPCSDAEGKEVCGDKDMKTLPFVGNXLGDRWFFDILQKKWKYVGPRCQPRGGHSEAEMVPCSDAEGKEVCGDKDMKTLPFVGNDRASEVVMNNQDAYAVWLTEDAAR 210
BLAST of mRNA_P-littoralis_Contig90.146.1 vs. uniprot
Match: A0A6H5LDF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDF4_9PHAE) HSP 1 Score: 161 bits (408), Expect = 2.390e-40 Identity = 102/216 (47.22%), Postives = 138/216 (63.89%), Query Frame = 1
Query: 487 VRVAHDTGRGVTVDYSARGFETDPKTLLTFGQGTIGGAQ------KGARKLLAIDSEEDLRLKTPEVAVTTEDDTTIFVRLNDAAVLAARSETLFEKGSWLHNNVIGLAWVSSRGLSLVRTKEGTTRGGEPWVWFVTVIDNWNYCWSGPGFVMFVTHNWCFTGYKNLKRHDRKGANKMEVGRSADFSTPSAKGRANYSGEQKGREKSTKELKADGG 1116
V + HDTG G DYS R +D KT GGAQ +GA +++ + ED R++T E A TT ++T+ + L D + R +TLF++G WL N IG+A V S+ +SLV T +R G V+F +I+N +YC +GP F+ F+ F+GYKNL +HD+K A +EVGRS DFSTP++KGRA+YSGEQKGREKSTKELKA+GG
Sbjct: 160 VDMVHDTGGGEDTDYSGR--LSDAKTRAYHDGRVFGGAQSAGSGRRGATRIVEVGLAEDERVRT-EAADTTHVESTMALPLWDVVAIMGRKDTLFKQGLWLFGNAIGIAKVGSK-VSLVETTPKKSRSG---VFFTVMINNRDYCGTGPFFLTFLV-GCSFSGYKNLAKHDKKAAG-LEVGRSGDFSTPASKGRAHYSGEQKGREKSTKELKAEGG 366
BLAST of mRNA_P-littoralis_Contig90.146.1 vs. uniprot
Match: A0A6H5K5U5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5U5_9PHAE) HSP 1 Score: 153 bits (386), Expect = 1.500e-36 Identity = 77/140 (55.00%), Postives = 103/140 (73.57%), Query Frame = 1
Query: 1078 REKSTKELKAD---GGKTRG---NMIQSDHARGGAGIRRRLTLAKHVLRPRPVSVGVPLFKSFKCSKKGCRRWHELGDRWFYDVVQKVWRYVGPVCRPKGGHSAAEMVPCLDAKGKTGAG--QMKELPFVGNSAASTVVR 1473
R + T++ +AD GGK G N+ ++DHARGGAG+R +TLA+ + RPRP S +P FKS +C ++GC + H+LGDRWF+D++QK W+YVG C+PKGGHSAAEMVPC D +GK G +MK LPFVGN+ AS +VR
Sbjct: 273 RRRVTEKARADQVKGGKLEGCSENVGRTDHARGGAGVRGDITLARDIFRPRPESTEIPPFKSLRCPQEGCGKVHKLGDRWFFDILQKRWKYVGLRCQPKGGHSAAEMVPCSDEEGKEKYGDKEMKTLPFVGNNRASKIVR 412 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig90.146.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig90.146.1 >prot_P-littoralis_Contig90.146.1 ID=prot_P-littoralis_Contig90.146.1|Name=mRNA_P-littoralis_Contig90.146.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=435bp MKSSSTRRSSSTRRARTLPKIGVRVAHDTGRGVTVDYSARGFETDPKTLLback to top mRNA from alignment at P-littoralis_Contig90:567954..571262+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig90.146.1 ID=mRNA_P-littoralis_Contig90.146.1|Name=mRNA_P-littoralis_Contig90.146.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3309bp|location=Sequence derived from alignment at P-littoralis_Contig90:567954..571262+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig90:567954..571262+ >mRNA_P-littoralis_Contig90.146.1 ID=mRNA_P-littoralis_Contig90.146.1|Name=mRNA_P-littoralis_Contig90.146.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1305bp|location=Sequence derived from alignment at P-littoralis_Contig90:567954..571262+ (Pylaiella littoralis U1_48)back to top |