prot_P-littoralis_Contig90.133.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig90.133.1
Unique Nameprot_P-littoralis_Contig90.133.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length84
Homology
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BLAST of mRNA_P-littoralis_Contig90.133.1 vs. uniprot
Match: D8LHH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHH6_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 3.480e-19
Identity = 49/62 (79.03%), Postives = 56/62 (90.32%), Query Frame = 0 
Query:    1 MKERVLQLRSAVALGRLKPLGNRLFQVAAGKHSRIAVVLTLASTGSAEELQRERSVERNIQM 62
            MKERVLQLR+A+A  +LKPLGNRL QV AGK +RIAVVLTLASTGS EELQRER+VER+IQ+
Sbjct: 1285 MKERVLQLRNAIAREKLKPLGNRLVQVPAGKRTRIAVVLTLASTGSQEELQRERTVERHIQV 1346
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BLAST of mRNA_P-littoralis_Contig90.133.1 vs. uniprot
Match: A0A835YT04_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT04_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 5.150e-12
Identity = 45/73 (61.64%), Postives = 52/73 (71.23%), Query Frame = 0 
Query:    7 QLRSAVALGRLKPLGNR-LFQVAAGKHSRIAVVLTLASTGSAEELQRERSVERNIQMRLLNVNSSQLPPSLRR 78
            +L  AVA GRLKPL  + LFQV      ++AVVLT+   G  EELQRER+VER I MRLLNVNSS LP +LRR
Sbjct: 2372 ELSKAVADGRLKPLPQKQLFQVGV----QVAVVLTVKPAGGNEELQRERTVERTIHMRLLNVNSSHLPHNLRR 2440
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig90.133.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHH6_ECTSI3.480e-1979.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YT04_9STRA5.150e-1261.64Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig90contigP-littoralis_Contig90:493499..494464 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig90.133.1mRNA_P-littoralis_Contig90.133.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig90 493499..494479 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig90.133.1 ID=prot_P-littoralis_Contig90.133.1|Name=mRNA_P-littoralis_Contig90.133.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=84bp
MKERVLQLRSAVALGRLKPLGNRLFQVAAGKHSRIAVVLTLASTGSAEEL
QRERSVERNIQMRLLNVNSSQLPPSLRRGAAAAS
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