prot_P-littoralis_Contig90.129.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig90.129.1
Unique Nameprot_P-littoralis_Contig90.129.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length120
Homology
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BLAST of mRNA_P-littoralis_Contig90.129.1 vs. uniprot
Match: D8LHH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHH6_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 4.320e-48
Identity = 92/119 (77.31%), Postives = 102/119 (85.71%), Query Frame = 0 
Query:    5 GSSASPGMFSLHSVSSLDVIVKVSWDNESARRLGVLPVL---SPAFLFRAESPGNGAQTAAVSPPAGEIAAVLHAGSTLDVSVKLDGTVRVPVGRWCVGAVLVTVIDQHHQQPASDGNL 120
            G +   GMFSLHSV+S D+IVKVSWD+ESARRLGVLP     +PAFLFRAESP NG QTAA SPPAG +AAVLHAGSTLDVSVKLDGTV VPVGRWCVGAV+VTVIDQHHQ P +DG++
Sbjct: 2246 GGATQTGMFSLHSVASQDIIVKVSWDDESARRLGVLPPAPAPAPAFLFRAESPANGVQTAAASPPAGVLAAVLHAGSTLDVSVKLDGTVSVPVGRWCVGAVVVTVIDQHHQ-PFNDGSV 2363
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BLAST of mRNA_P-littoralis_Contig90.129.1 vs. uniprot
Match: A0A6H5KWQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ8_9PHAE)

HSP 1 Score: 167 bits (422), Expect = 1.560e-45
Identity = 89/116 (76.72%), Postives = 99/116 (85.34%), Query Frame = 0 
Query:    5 GSSASPGMFSLHSVSSLDVIVKVSWDNESARRLGVLPVLSPAFLFRAESPGNGAQTAAVSPPAGEIAAVLHAGSTLDVSVKLDGTVRVPVGRWCVGAVLVTVIDQHHQQPASDGNL 120
            G +   GMFSLHSV+S D+IV  SWD+ESARRLGVLP  SPAFLFRAESP NG QTAA SPPAG +AAVLHAGSTLDVSVKLDGTV VPVGRWCVGAV+VTVI QH+Q P +DG++
Sbjct:  528 GGATQTGMFSLHSVASEDIIV--SWDDESARRLGVLPAPSPAFLFRAESPANGVQTAAASPPAGVLAAVLHAGSTLDVSVKLDGTVSVPVGRWCVGAVVVTVIGQHYQ-PFNDGSV 640
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig90.129.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHH6_ECTSI4.320e-4877.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KWQ8_9PHAE1.560e-4576.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig90contigP-littoralis_Contig90:481475..483113 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig90.129.1mRNA_P-littoralis_Contig90.129.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig90 481474..483113 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig90.129.1 ID=prot_P-littoralis_Contig90.129.1|Name=mRNA_P-littoralis_Contig90.129.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=120bp
VAAGGSSASPGMFSLHSVSSLDVIVKVSWDNESARRLGVLPVLSPAFLFR
AESPGNGAQTAAVSPPAGEIAAVLHAGSTLDVSVKLDGTVRVPVGRWCVG
AVLVTVIDQHHQQPASDGNL
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