prot_P-littoralis_Contig90.128.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig90.128.1
Unique Nameprot_P-littoralis_Contig90.128.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length549
Homology
BLAST of mRNA_P-littoralis_Contig90.128.1 vs. uniprot
Match: D8LHH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHH6_ECTSI)

HSP 1 Score: 493 bits (1268), Expect = 4.410e-152
Identity = 338/575 (58.78%), Postives = 366/575 (63.65%), Query Frame = 0
Query:    3 HKLYVPIVLEALPDSCLGVVRKVDLGAVALDSSTASSFVVKNLSAGPAPLRFVVMV-AGKPATNSLLLTNQQTGTVPPGGSMEVSFSFDATSVGRWTHDLAVRNLGNKHDQAKVTVSATVKPRMYLHFPDLDPSARGKPEKLQIGYCYMPGLASTHTGAQSPSQNQQQQQGASLSSRGNGVTA--------------ADRESEIVRPLRVRNVSDRKLYLTCTPNLRKQCFVYAESPSSSGNDDDNRIPCYSSPSFPATAYVVGGEEGAXXXXXXXX------SGWSAVVPNRPQVADLPLLPQSETTLYIGLRPVLPLEALTSGDCRELVGGVRILGHSRPLTDPGEDSTERGGTINSGFSETGDDHSVPGGASRPVS---SKVSSTGDG-GVPSAAGGVVEPGAGMATAAAATVTGRSLASSPVAGLAAEAV-AARLAADRLFELTIKFVGTVGVSILRLRRQPS-AFSLLENRGDGSGGDGFRGEVPHATATGREXXXXXXXXXXXXXXXXXXXXSPAGLGMTGIGSPPSLSLLPPRKRVLYGSIELENVTKALPLVYRVV-------PGDG 543
            HKL+VPIVLEALPDSCLGV RK+DLG VALDS T+SSF V NLS+GP P  FVVMV A K  TNSLLLTNQQTGTV PG S+EVSFSF ATS+GRWTHDLAVRNLGNKHDQAKVTVSATVKPRMYLHFPDLDP+A+GKPEKLQIG+CYMPGL ST  GA   + + Q Q G  LS  G                   ADRESEIVRPLRVRNVSDR LYLTCTPNLRKQCFVY+E PS+  +                           XXXXXXXX      S W + VPNRPQVADLPLLPQSETTLY+GLRPVLP EA T+GDCRELVGGVRILGHSR L +   D  ER     SG SE  + H  P G S   S   S++S  G G G P+A G     G  +A AAAA    R L SSP AGL      +AR AADRLFELTIKFVGT+GVSILRLRRQ S AFSLL  R  G G  G   EV      G                      +  G G TG  S          KRV+YGS+ELENVTKALPLVYR         PGDG
Sbjct: 2382 HKLFVPIVLEALPDSCLGVARKLDLGTVALDSITSSSFEVTNLSSGPTPFSFVVMVVASKSPTNSLLLTNQQTGTVQPGESVEVSFSFHATSIGRWTHDLAVRNLGNKHDQAKVTVSATVKPRMYLHFPDLDPNAKGKPEKLQIGFCYMPGLVSTGGGAAXXAAHSQPQLGV-LSGVGKNAAXXXXXXXXXXXXXXEADRESEIVRPLRVRNVSDRALYLTCTPNLRKQCFVYSEIPSAETSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDWLSAVPNRPQVADLPLLPQSETTLYVGLRPVLPPEAYTAGDCRELVGGVRILGHSRTLAEAAGDG-ERESRAGSGRSENNEGHLAPVGPSSSSSCSPSQMSPAGAGDGSPAAVGAESAGGTVVAAAAAA----RPL-SSPTAGLXXXXXXSARPAADRLFELTIKFVGTIGVSILRLRRQGSEAFSLLAPRSGGGGLGGSGQEVVMMARNGSAALGSVAA-------------AAPGRGTTGESSA--------GKRVVYGSLELENVTKALPLVYRFARGGDNAGPGDG 2928          
BLAST of mRNA_P-littoralis_Contig90.128.1 vs. uniprot
Match: A0A6H5KWQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ8_9PHAE)

HSP 1 Score: 424 bits (1090), Expect = 2.630e-128
Identity = 310/574 (54.01%), Postives = 337/574 (58.71%), Query Frame = 0
Query:    3 HKLYVPIVLEALPDSCLGVVRKVDLGAVALDSSTASSFVVKNLSAGPAPLRFVVMVAGKPATNSLLLTNQQTGTVPPGGSMEVSFSFDATSVGRWTHDLAVRNLGNKHDQAKVTVSATVKPRMYLHFPDLDPSARGKPEKLQIGYCYMPGLAST-------HTGAQSPSQNQQQQQGASLSSRGNGVTAA-------------DRESEIVRPLRVRNVSDRKLYLTCTPNLRKQCFVYAESPSSSGNDDDNRIPCYSS----------PSFPATAYVVGGEEGAXXXXXXXXSGWSAVVPNRPQVADLPLLPQSETTLYIGLRPVLPLEALTSGDCRELVGGVRILGHSRPLTDPGEDSTERGGTINSGFSETGDDHSVPGGASRPVSSKVSSTGDGGVP--SAAGGVVEPGAGMATAAAATVTGRSLASSPVAGLAAEAVA----ARLAADRLFELTIKFVGTVGVSILRLRRQPS-AFSLL--ENRGDGSGGDGFRGEVPHATATGREXXXXXXXXXXXXXXXXXXXXSPAGLGMTGIGSPPSLSLLPPRKRVLYGSIELENVTKALPLVYR 537
            HKL+VPIVLEALPDSCLGV RK+DLG VALDS T+SSF + NLS+GPAPL             SLLLTNQQTGTV PG S++VSFSF ATSVGRWTHDLA          AKVTVSATVKPRMYLHFPDLDP+A+GKPEKLQIG+CYMPGL ST                + + Q G  LS  G   TAA             DRESEIVRPLRVRNVSDR LYLTCTPNL+KQCFVY+E PS+  +   + +   S           P               XXXXX   S W + VPNRPQVADLPLLPQSETTLYIGLRPVLP EA T+GDCRELVGGVRILGHSR L +   D  ER     S  SE  + H  P G S                  SAA G    G G A A AAT   R L SSP AG           AR AADRLFELTIKFVGTVGVSILRLRRQ S AFSLL   + GDG GG G   EV      G                      +  G G TG  S          KRV+YGS+ELENVTKALPL+YR
Sbjct:  659 HKLFVPIVLEALPDSCLGVARKLDLGTVALDSITSSSFELTNLSSGPAPL-------------SLLLTNQQTGTVQPGESVQVSFSFHATSVGRWTHDLA----------AKVTVSATVKPRMYLHFPDLDPNAKGKPEKLQIGFCYMPGLVSTGGXXXXXXXXXXXXXAHSKPQLGV-LSGVGKNATAAAXXXXXXXXXXXADRESEIVRPLRVRNVSDRALYLTCTPNLKKQCFVYSEIPSAETSSSSSLLLSESQAPKEGSGQVGPXXXXXXXXXXXXXXXXXXXXVGGSEWLSTVPNRPQVADLPLLPQSETTLYIGLRPVLPPEAYTAGDCRELVGGVRILGHSRTLAEATGDG-ERESRAGSSRSENNEGHLAPVGPSSXXXXXXXXXXXXXXXXXSAAVGTDSAG-GTAVAVAATTAARPL-SSPTAGXXXXXXXXXXXARPAADRLFELTIKFVGTVGVSILRLRRQSSEAFSLLAPSSGGDGLGGSGQ--EVVMMAGDGSAALGNVAA-------------AAPGRGTTGDSSA--------GKRVVYGSLELENVTKALPLMYR 1182          
BLAST of mRNA_P-littoralis_Contig90.128.1 vs. uniprot
Match: A0A835YYQ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYQ9_9STRA)

HSP 1 Score: 230 bits (587), Expect = 1.450e-61
Identity = 160/399 (40.10%), Postives = 196/399 (49.12%), Query Frame = 0
Query:   51 PLRFVVMVAGKPATNSLLLTNQQTGTVPPGGSMEVSFSFDATSVGRWTHDLAVRNLGNKHDQAKVTVSATVKPRMYLHFPDLDPSARGKPEKLQIGYCYMPGLASTHTGAQSPSQNQQQQQGASLSSRGNGVTAADRESEIVRPLRVRNVSDRKLYLTCTPNLRKQCFVYAESPSSSGNDDDNRIPCYSSPSFPATAYVVGGEEGAXXXXXXXXSGWSAVVPNRPQVADLPLLPQSETTLYIGLRPVLPLEALTSGDCRELVGGVRILGHSRPLTDPGEDSTERGGTINSGFSETGDDHSVPGGASRPVSSKVSSTGDGGVPSAAGGVVEPGAGMATAAAATVTGRSLASSPVAGLAAEAVAARLAADRLFELTIKFVGTVGVSILRLRRQPSAFSLLE 449
            P+++VVM+  KPA N+L +T  QTGT+PP GS +V  S  A  VGRW HD+ VRNL NKHDQA VTV+ATVKP MYLHFPDLDP+A GK +++QIG CY+P +  T                     RG  V       E +RPL VRNVS + LYLT  PNLRKQCF+Y+ +                           GGE                      QV DL L   ++ TLYI LRPVLPLEA  +GD RELVGG+R +G SR   +   +     G       E  DD + P         +V          A   V EP  G                   A   AE V   LAAD+LFELT+KFVGT GVSI+R     S F++L+
Sbjct:  502 PVKYVVMLVAKPAGNTLTVTEHQTGTLPPKGSQDVRLSLRAAVVGRWMHDIVVRNLANKHDQATVTVTATVKPAMYLHFPDLDPAALGKLQEIQIGNCYLPPVEPTRA----------------PEDRGPLV------EEALRPLSVRNVSSQHLYLTAIPNLRKQCFIYSRT-------------------------RPGGE--------------------LTQVVDLSLPAHADVTLYIELRPVLPLEAYVTGDIRELVGGIRFVGFSRSYAEKMREKEREKGEKGKDSGEGKDDSNAP---------EV----------AVVQVAEPDGG-------------------ARADAETVVMELAADKLFELTVKFVGTAGVSIMRAAPTQSKFAVLK 795          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig90.128.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LHH6_ECTSI4.410e-15258.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KWQ8_9PHAE2.630e-12854.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YYQ9_9STRA1.450e-6140.10Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 17..122
e-value: 1.2E-8
score: 37.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..187
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 322..375
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..183
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 456..484
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 332..346

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig90contigP-littoralis_Contig90:477967..481408 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig90.128.1mRNA_P-littoralis_Contig90.128.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig90 477967..481408 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig90.128.1 ID=prot_P-littoralis_Contig90.128.1|Name=mRNA_P-littoralis_Contig90.128.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=549bp
FVHKLYVPIVLEALPDSCLGVVRKVDLGAVALDSSTASSFVVKNLSAGPA
PLRFVVMVAGKPATNSLLLTNQQTGTVPPGGSMEVSFSFDATSVGRWTHD
LAVRNLGNKHDQAKVTVSATVKPRMYLHFPDLDPSARGKPEKLQIGYCYM
PGLASTHTGAQSPSQNQQQQQGASLSSRGNGVTAADRESEIVRPLRVRNV
SDRKLYLTCTPNLRKQCFVYAESPSSSGNDDDNRIPCYSSPSFPATAYVV
GGEEGAGGGGGGGGSGWSAVVPNRPQVADLPLLPQSETTLYIGLRPVLPL
EALTSGDCRELVGGVRILGHSRPLTDPGEDSTERGGTINSGFSETGDDHS
VPGGASRPVSSKVSSTGDGGVPSAAGGVVEPGAGMATAAAATVTGRSLAS
SPVAGLAAEAVAARLAADRLFELTIKFVGTVGVSILRLRRQPSAFSLLEN
RGDGSGGDGFRGEVPHATATGREEEETAAAAAAAATAQSASAASPAGLGM
TGIGSPPSLSLLPPRKRVLYGSIELENVTKALPLVYRVVPGDGGKRSNG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold