prot_P-littoralis_Contig90.124.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig90.124.1
Unique Nameprot_P-littoralis_Contig90.124.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length528
Homology
BLAST of mRNA_P-littoralis_Contig90.124.1 vs. uniprot
Match: A0A6H5KWQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ8_9PHAE)

HSP 1 Score: 339 bits (869), Expect = 3.920e-99
Identity = 302/543 (55.62%), Postives = 333/543 (61.33%), Query Frame = 0
Query:    1 LALPGARLPPELLPPPEPALLEXXXXXXXXXXXXXXGMSREPSVDWGQHIRLTGTVRVEVALEDRAGDPDLMGLATAGGGAAPGGQDEGVLVESVALVGSLVPGPTFGLSCSSVTVVLRPXXXXXXXXXXHGDETHPYDPEGPASFFVESFSQSLGPVRLKLAGGGRLFLDRGVRVPAADDEGGGRRQPARVARLVTAIAEPSRGIVSANRRREVAVRLIAA------EQGEGCAGAAGYDDEEDGLSDGIREDQCDLFVSIMDADHPGYPPQVVSVLVDVPAAAMVVPDPEDGEVGRVSPGEDGSV--DVLTGG--AGR----WSSNGNATDASARTEAEEARGSARSRSEMAQVGDTAATAKS-----------------------------STVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAAGPLKLGASASDFEGSGTGAA----------LPLLEMRGCTPIGNKSSRFEINLGQQLAHLSSLEWQVSLMWPAARRVRRAS 490
            LALPGARLPPEL+PPP P L E                    + DWGQH+RL GTVRVE+ALED     D +     GGG    GQ+EGVLVESVALVGSLVPGPTFGLS +SVTV LRP     XXXXX GD  +PYDPEGPA+FF+ESFSQS+ PV LKL GGGRLFL RGVRVPAA+D       PARV R VTAIAEPS  IVSA +RREVAVRLIAA      +QG+GC G A   +EE     G  ED+CDLFVSI DADHPGYPPQVVSV V+VPA  + +   + G  G + PG  G V  D L GG  A R     S+ G   DA  R   +E+R SAR+R   +   D A                                    V               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   GPL LG S +    + T             LPLLE+RGCTPIG KSSRFEINLGQQLAH SSLEW VSLMWPA  R+RR S
Sbjct: 2111 LALPGARLPPELIPPPGPNLAEEGGGTEATM------FGAPGTADWGQHMRLMGTVRVEIALEDL----DDVVPGAGGGGDGGSGQEEGVLVESVALVGSLVPGPTFGLSHTSVTVELRPPDSGGXXXXXDGDVKYPYDPEGPATFFLESFSQSMRPVNLKLEGGGRLFLARGVRVPAAEDGXXXXXXPARVVRAVTAIAEPSSLIVSATKRREVAVRLIAAAEELEEKQGKGCGGRARRAEEE-----GEEEDRCDLFVSITDADHPGYPPQVVSVQVEVPADVVDLESEDMG--GIILPGMAGPVVEDALAGGERASRASYGLSNGGEGADALGRMSPDESRKSARARGGASLAVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLVPLPRKRSGFLSPPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPLALGTSPAAAGNAFTRGXXXXXXXXXXPLPLLEVRGCTPIGPKSSRFEINLGQQLAHPSSLEWPVSLMWPAVHRLRRGS 2636          
BLAST of mRNA_P-littoralis_Contig90.124.1 vs. uniprot
Match: D8LHH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHH6_ECTSI)

HSP 1 Score: 258 bits (659), Expect = 3.020e-71
Identity = 187/358 (52.23%), Postives = 209/358 (58.38%), Query Frame = 0
Query:    1 LALPGARLPPELLPPPEPALLEXXXXXXXXXXXXXXGMSREPSV-DWGQHIRLTGTVRVEVALEDRAGDPDLMGLATAGGGAAPG------------GQDEGVLVESVALVGSLVPGPTFGLSCSSVTVVLRPXXXXXXXXXXHGDETHPYDPEGPASFFVESFSQSLGPVRLKLAGGGRLFLDRGVRVPAADDEGGGRRQPARVARLVTAIAEPSR-GIVSANRRREVAVRLIAAEQGEGCAGAAGYDDEEDGLSDGIREDQCDLFVSIMDADHPGYPPQVVSVLVDVPAAAMVVPDPEDGEVGRVSPGEDGSV--DVLTGG--AGRWS----SNGNATDASARTEAEEARGSARSR 336
            LALPGARLPPEL+PPPEP L E               M   P+  DWGQH+RL GTVRVE+ALEDRAGDPD + L     GA               GQ+EGVLVESVALVGSLVPGPTFGLS +SVTV LRP     XXXXX GD  +PYDPEGPA+FF+ESFSQSL PVRLKL GGGRLFL RGVRVPAA+D        ARVAR VTAIAEPS                                            ED+CDLFV I DADHPGYPPQVVSV V+VPA  + +   + G  G + PG  G V  D L GG  A R S    + G   DA  R  ++E+R SAR+R
Sbjct: 3846 LALPGARLPPELIPPPEPNLAEEGGGTEA-------AMFGVPATSDWGQHMRLVGTVRVEIALEDRAGDPDQLDLDDVAPGAGXXXXXXXXXXXXXXGQEEGVLVESVALVGSLVPGPTFGLSHTSVTVELRPPDSGGXXXXXDGDVKYPYDPEGPATFFLESFSQSLRPVRLKLEGGGRLFLARGVRVPAAEDGXXXXXXXARVARAVTAIAEPSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEEDRCDLFVRITDADHPGYPPQVVSVQVEVPADVVDLESEDMG--GIILPGMAGPVVEDALAGGERASRGSYGLSNGGEGADALGRMSSDESRKSARAR 4194          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig90.124.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KWQ8_9PHAE3.920e-9955.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHH6_ECTSI3.020e-7152.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 283..372
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 507..528
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 506..528
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 307..321
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 338..352

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig90contigP-littoralis_Contig90:472827..475035 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig90.124.1mRNA_P-littoralis_Contig90.124.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig90 472825..475035 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig90.124.1 ID=prot_P-littoralis_Contig90.124.1|Name=mRNA_P-littoralis_Contig90.124.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=528bp
LALPGARLPPELLPPPEPALLEGGTAAEVAVAAGGGGMSREPSVDWGQHI
RLTGTVRVEVALEDRAGDPDLMGLATAGGGAAPGGQDEGVLVESVALVGS
LVPGPTFGLSCSSVTVVLRPPESGGGGGGGHGDETHPYDPEGPASFFVES
FSQSLGPVRLKLAGGGRLFLDRGVRVPAADDEGGGRRQPARVARLVTAIA
EPSRGIVSANRRREVAVRLIAAEQGEGCAGAAGYDDEEDGLSDGIREDQC
DLFVSIMDADHPGYPPQVVSVLVDVPAAAMVVPDPEDGEVGRVSPGEDGS
VDVLTGGAGRWSSNGNATDASARTEAEEARGSARSRSEMAQVGDTAATAK
SSTVEGGGGGGGGAAGGGASRTDKFLSKKSSGFFPPLSGAAAAAAEPTGA
SSSSSSSAIAAATAAAIAAGPLKLGASASDFEGSGTGAALPLLEMRGCTP
IGNKSSRFEINLGQQLAHLSSLEWQVSLMWPAARRVRRASHSPSLLGAAG
DGAGVGGISSGSSSGGGGGGGGGSSSNS
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