mRNA_P-littoralis_Contig90.122.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig90.122.1 vs. uniprot
Match: A0A6H5KWQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ8_9PHAE) HSP 1 Score: 263 bits (673), Expect = 5.670e-78 Identity = 138/170 (81.18%), Postives = 150/170 (88.24%), Query Frame = 1
Query: 28 QEPLVLDYGDVYEDKLYRRRSFMIVNHAAMPLEFQLSSSLPASELNFSLSAVTLKQFKSVHVEAKTRLQVFAHYRPVAKEPAALSRKGSERVM--SAQTDDPGREVEAVTVHERLSITCRLVKDFQQEIQLYARRHSPQLRLLVEGSVHAPGETRYNESID-ILFVVRET 528
+EPLVLDYGDVYE KLY+RRSF+IVNHAAMPLEFQLSSSLPASELNFSLSAVTLKQFKSVHVEAKTRLQVFAHYRPV K PAA++RKGS+R + SA DDPG+E EAVTV ERLSITCRLVKDFQQEIQL+ARRHSPQL +LVEG A G R +ES + ILFVVRET
Sbjct: 2865 REPLVLDYGDVYEGKLYQRRSFVIVNHAAMPLEFQLSSSLPASELNFSLSAVTLKQFKSVHVEAKTRLQVFAHYRPVEKSPAAVARKGSQRALTVSAAADDPGKEAEAVTVRERLSITCRLVKDFQQEIQLFARRHSPQLHVLVEGDATAAGRNRCSESSNSILFVVRET 3034
BLAST of mRNA_P-littoralis_Contig90.122.1 vs. uniprot
Match: D8LHH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHH6_ECTSI) HSP 1 Score: 217 bits (553), Expect = 7.760e-62 Identity = 114/142 (80.28%), Postives = 123/142 (86.62%), Query Frame = 1
Query: 28 QEPLVLDYGDVYEDKLYRRRSFMIVNHAAMPLEFQLSSSLPASELNFSLSAVTLKQFKSVHVEAKTRLQVFAHYRPVAKEPAALSRKGSERVM--SAQTDDPGREVEAVTVHERLSITCRLVKDFQQEIQL------YARRH 429
+EPLVLDYGDVYE KLY+RRSF+IVN AAMPLEFQLSSSLPASELNFSLSA TLKQFKSVHVEAKT LQV+AHYRPVAK PAA++RKGS+R + SA DDPG+E EAVTV ERLSITCRLVKDFQQEIQL Y RRH
Sbjct: 4266 REPLVLDYGDVYEGKLYQRRSFVIVNRAAMPLEFQLSSSLPASELNFSLSAATLKQFKSVHVEAKTSLQVYAHYRPVAKSPAAVARKGSQRALDVSAAADDPGKEAEAVTVRERLSITCRLVKDFQQEIQLFEHFMVYNRRH 4407
BLAST of mRNA_P-littoralis_Contig90.122.1 vs. uniprot
Match: A0A835YYQ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYQ9_9STRA) HSP 1 Score: 179 bits (454), Expect = 1.520e-48 Identity = 95/166 (57.23%), Postives = 121/166 (72.89%), Query Frame = 1
Query: 28 QEPLVLDYGDVYEDKLYRRRSFMIVNHAAMPLEFQLSSSLPASELNFSLSAVTLKQFKSVHVEAKTRLQVFAHYRPVAKEPAALSRKGSERVMSAQTDDPGREVEAVTVHERLSITCRLVKDFQQEIQLYARRHSPQLRLLVEGSVHAPGETRYNESIDILFVVRE 525
++ LV+++GDVYE KLY RRSF+I+N +AMPLEFQLSSSL SELNFSLSAVTLKQFKSV +EA ++LQVF HY PVA++ A +R+ S + + V+ V V E + ITCRLVKDFQQ +QL+ARR +PQLR VEG+ A G Y ++ ILFV +E
Sbjct: 1786 EQGLVMNFGDVYEGKLYNRRSFVILNSSAMPLEFQLSSSLSPSELNFSLSAVTLKQFKSVTIEANSKLQVFVHYAPVARQAARSTRQLSSA--GWEEANASLPVQEVPVREHIYITCRLVKDFQQVVQLWARRRTPQLRTHVEGTGDAEGSATYGDATGILFVAKE 1949
BLAST of mRNA_P-littoralis_Contig90.122.1 vs. uniprot
Match: A0A2D4BVL3_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BVL3_PYTIN) HSP 1 Score: 88.6 bits (218), Expect = 6.610e-17 Identity = 58/165 (35.15%), Postives = 93/165 (56.36%), Query Frame = 1
Query: 25 AQEP-LVLDYGDVYEDKLYRRRSFMIVNHAAMPLEFQLSSSLPASELNFSLSAVTLKQFKSVHVEAKTRLQVFAHYRPVAKEPAALSRKGSERVMSAQTDDPGREVEAVTVHERLSITCRLVKDFQQEIQLYARRHSPQLRLLVEGSVHAPGETRYNE---SIDI 507
+ EP L++DYG+VY +KLY S +I N ++M L+F L+S+ +E+ FS+S +L + +V + R+QVF H+RP+ K+ M + D RE+E I+CRLVKDF++ + L A H PQL +V+ S P +T ++ S+D+
Sbjct: 2624 SSEPRLLIDYGEVYYNKLYLNHSIVIENSSSMTLDFMLASNARPNEVGFSVSPTSLTEVSAVTLAPHGRMQVFLHFRPLPKQE-----------MLSFGDTWNREIEVY-------ISCRLVKDFRETVLLKAICHPPQL--VVQVSTKPPIDTHSSDEAQSVDL 2768
BLAST of mRNA_P-littoralis_Contig90.122.1 vs. uniprot
Match: A0A0N7L4P6_PLAHL (PapD-like n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L4P6_PLAHL) HSP 1 Score: 81.3 bits (199), Expect = 2.260e-14 Identity = 52/154 (33.77%), Postives = 89/154 (57.79%), Query Frame = 1
Query: 19 GGAQEPLVLDYGDVYEDKLYRRRSFMIVNHAAMPLEFQLSSSLPASELNFSLSAVTLKQFKSVHVEAKTRLQVFAHYRPVAKEPAALSRKGSERVMSAQTDDPG-REVEAVTVHERLSITCRLVKDFQQEIQLYARRHSPQLRLLVE-GSVHAP 474
GGA L++D+ +VY +KLY+ S +I N +++ L+F LSS+ E+ FS+S ++ + ++ +E+ +QVF ++RP K+ LS + S+ + Q +P RE+E ++CRLVKDF++ + + A PQL + V G H P
Sbjct: 3299 GGAPR-LLIDFSEVYYNKLYQNHSIVIENSSSLSLDFILSSNARPQEVGFSVSPMSFYEVTTITLESHASMQVFLYFRPQPKQTTLLS-ETSDVLSDDQLIEPWVREIEVY-------VSCRLVKDFRETVIIRAICSQPQLMVNVSNGDKHDP 3443
BLAST of mRNA_P-littoralis_Contig90.122.1 vs. uniprot
Match: F0ZM04_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZM04_DICPU) HSP 1 Score: 78.6 bits (192), Expect = 1.920e-13 Identity = 50/146 (34.25%), Postives = 83/146 (56.85%), Query Frame = 1
Query: 22 GAQEPLV-LDYGDVYEDKLYRRRSFMIVNHAAMPLEFQLSSSLPAS---ELNFSLSAVTLKQFKSVHVEAKTRLQVFAHYRPVAKEPAALSRKGSERVMSAQTDDPGREVEAVTVHERLSITCRLVKDFQQEIQLYARRHSPQLRL 447
G Q P ++ GDVY + Y RSF++ N ++MPL+F LS+SLP S E+ FSLS L+QF +++VE ++++VF ++ + + S +S T++ T ++ + CRL++D+QQ I L A PQ++L
Sbjct: 2719 GKQNPTPSINLGDVYYNITYTDRSFIVSNSSSMPLDFMLSTSLPPSDPTEVCFSLSRSYLRQFNTLYVEPNSQVKVFLYFHCPSPQNT------SANPLSLSTNN------TTTKEIKIFLNCRLIRDYQQVINLTAACKYPQIKL 2852
BLAST of mRNA_P-littoralis_Contig90.122.1 vs. uniprot
Match: A0A7S0ZEV6_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZEV6_9RHOD) HSP 1 Score: 76.6 bits (187), Expect = 6.900e-13 Identity = 43/127 (33.86%), Postives = 71/127 (55.91%), Query Frame = 1
Query: 40 VLDYGDVYEDKLYRRRSFMIVNHAAMPLEFQLSSSLPAS---ELNFSLSAVTLKQFKSVHVEAKTRLQVFAHYRPVAKEPAALSRKGSERVMSAQTDDPGREVEAVTVHERLSITCRLVKDFQQEIQ 411
+++YG V D LYR RSF+++NHA + +EF +LP S ELNFS++ +LK+ S+ + AK++ ++F +YRP + + ++ D P + L + CRLVK+FQ I+
Sbjct: 22 IMNYGLVVADHLYRHRSFVVINHADVAMEFIFRHNLPPSAKSELNFSVTNTSLKKVSSLTISAKSKRRIFLYYRPSLESFSV-----QDQTQPIHVDQPK------LIEFNLHVLCRLVKNFQVTIK 137
BLAST of mRNA_P-littoralis_Contig90.122.1 vs. uniprot
Match: A0A7J7IMM0_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IMM0_9RHOD) HSP 1 Score: 76.3 bits (186), Expect = 1.160e-12 Identity = 45/141 (31.91%), Postives = 75/141 (53.19%), Query Frame = 1
Query: 34 PLVLDYGDVYEDKLYRRRSFMIVNHAAMPLEFQLSSSLPA---SELNFSLSAVTLKQFKSVHVEAKTRLQVFAHYRPVAKEPAALSRKGSERVMSAQTDDPGREVEAVTVHERLSITCRLVKDFQQEIQLYARRHSPQLRL 447
P+ +DYG V +YR +S I N + PLEF L LP+ SEL+FS S + L++ SV VE ++F ++RP EP +T++ + ++ L ++CRLV+D+++ +++ H PQLR+
Sbjct: 1367 PMAIDYGSVMLHHVYRNKSIRIRNVSDQPLEFLLRHDLPSQARSELHFSTSNLALRKVTSVWVEKGASRRIFLYFRP---EP--------------ETEESEQTTSIISRAFHLYVSCRLVRDYEESVEIRCACHPPQLRI 1490
BLAST of mRNA_P-littoralis_Contig90.122.1 vs. uniprot
Match: A0A8J4Q0Y0_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4Q0Y0_9MYCE) HSP 1 Score: 74.3 bits (181), Expect = 5.530e-12 Identity = 51/158 (32.28%), Postives = 81/158 (51.27%), Query Frame = 1
Query: 22 GAQEPLV-LDYGDVYEDKLYRRRSFMIVNHAAMPLEFQLSSSL---PASELNFSLSAVTLKQFKSVHVEAKTRLQVFAHYRPVAKEPAALSRKGSERVMSAQTDDPGREVEAVTVHERLSITCRLVKDFQQEIQLYARRHSPQLRLLVEGSVHAPGET 483
G Q P ++ GDVY Y RSF++ N ++MPL+F LS+SL ++E+ FSLS L+QF +++VE ++++VF ++ A P T D + + ++ + CRL++D+QQ I L A PQL L + V T
Sbjct: 2671 GKQTPTPSINLGDVYYGITYTDRSFIVSNSSSMPLDFMLSTSLLPTDSTEVCFSLSRSYLRQFNTLYVEPNSQVKVFVYFHSAAPSPPP------------STSDIANLLTQKDI--KIFLNCRLIRDYQQVINLSATCRYPQLDLSDQNLVFKESTT 2814
BLAST of mRNA_P-littoralis_Contig90.122.1 vs. uniprot
Match: A0A7S3A8C9_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A8C9_9RHOD) HSP 1 Score: 71.2 bits (173), Expect = 6.310e-11 Identity = 46/140 (32.86%), Postives = 75/140 (53.57%), Query Frame = 1
Query: 43 LDYGDVYEDKLYRRRSFMIVNHAAMPLEFQLSSSLPA---SELNFSLSAVTLKQFKSVHVEAKTRLQVFAHYRPVAKEPAALSRKGSERVMSAQTDDPGREVEAVTVHER--LSITCRLVKDFQQEIQLYARRHSPQLRL 447
L+Y D +YR RSF I N + LEF LS +P+ +E+NFS + TL++ S+ + + + ++F ++RP +E +G+ + A T+ + +SI CRLVKDFQ+ I++ A PQL+L
Sbjct: 2407 LEYSMATFDHVYRHRSFFICNDSDYELEFLLSHDVPSWWRTEVNFSSTNATLRKVNSLWINPRQKRRIFLYFRPRLEEEDLQHLQGN--------------LIATTIVRKFNVSINCRLVKDFQETIEITATCRPPQLKL 2532 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig90.122.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig90.122.1 >prot_P-littoralis_Contig90.122.1 ID=prot_P-littoralis_Contig90.122.1|Name=mRNA_P-littoralis_Contig90.122.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=197bp SGGSGGGGAQEPLVLDYGDVYEDKLYRRRSFMIVNHAAMPLEFQLSSSLPback to top mRNA from alignment at P-littoralis_Contig90:468901..471062- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig90.122.1 ID=mRNA_P-littoralis_Contig90.122.1|Name=mRNA_P-littoralis_Contig90.122.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2162bp|location=Sequence derived from alignment at P-littoralis_Contig90:468901..471062- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig90:468901..471062- >mRNA_P-littoralis_Contig90.122.1 ID=mRNA_P-littoralis_Contig90.122.1|Name=mRNA_P-littoralis_Contig90.122.1|organism=Pylaiella littoralis U1_48|type=CDS|length=591bp|location=Sequence derived from alignment at P-littoralis_Contig90:468901..471062- (Pylaiella littoralis U1_48)back to top |