mRNA_P-littoralis_Contig90.103.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig90.103.3 vs. uniprot
Match: D8LHH0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHH0_ECTSI) HSP 1 Score: 1559 bits (4036), Expect = 0.000e+0 Identity = 1114/1847 (60.31%), Postives = 1200/1847 (64.97%), Query Frame = 3
Query: 336 MARSRAKGRSAPSKGGKGPTQHSGRGAGSAPATTADTAVDGPSLLSPELMVELGDSSAGGAMFTQNANSKG-NKKKKRV-SSETRELAASMSKSKAKKLKQLDDKKLKDGRRAELYLKLEENRMSQQQLSLLQSSKTISMNQDTLRSRIKQAVQRAVAGIALSDAVLNELESHPGEVADVEEILALPVGGALAAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAVTVQDRRSCHGKAGNGGDXXAAEASLGDRAAPTAVVSSKKRSTCEGVPVATPKAKKRIEFAPPKTPISTKLNLDDKIAASVKKETAAPWGAAAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGSTWAEKMMASMARLPTSASTSEWGALASSSAPPGKIKSAADAMDAEEGGGDEAGSGRNASATAGDVDXXXXXXXXXXTPEAAVASYPPPPTWLEGNAPAYHAVETPLPSTSGMPKNNNNKGSATSRSTANLP-RPERWVPVKRPAALQAARMQLPVCGMEQEITEAIHDNDTIILCGETGSGKSTQVPQFLYEAGYAAHGLIGVTQPRRVAAVGTAERVAVELGTKCGKGGAVAYQIRYDASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHERNLNTDVLLGMLSRSIPLRKQVAQEEQRSWDMLSTESQKQAKCPLRPLKLVIMSATLRVSDFTENTALFPVPPPVISATSRQHPVTVHFSKRTELFDYVGETFKKVCKIHQRLPEGGVLVFLTGKREIVHMCDKLRREFPPP------------------------------------------RAGGG--RRKSGSGKT------------------------------------------VGAEEVEASTDSADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGELVGGMAK--------------------GGEEKGKGARGA-------------------------------------------------------DRETLLYREADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD------------------------------------------------ATRQALLPPVHVVPLYAMLTAEEQATVFRPPPEGHRLIVVATNVAETSITIPGIAYVVDCGRQKRRVVQRGSGISQFEVGWVSKASADQRAGRAGRTGPGHCYRLYSSALYTQTLEAFAPPEVLTRPLEDVMLQMKAMGIVDVSRFPFPTPPDAAGLRSAATLLANLGATAGRGNVPGGGSXXXXXXXXXXXXXXXXEITAVGKALALLPVGARYAKMLLLAVQGGLLAHAAALVAMLTEGDPFVRPDSAVKKKDGGGVEGEPVEHGEEDRGXXXXXXXAEDVRRRRAQWLHPTSDALARLKAAGAYAYATSGGTAVGGGDFCHENFLHAPTMDRSLQLRRQLSRLVDLRFGTEPGWKGCDVAGTLRPPSRKQTDALRQVLLAGLLDNVARRAPAGTVKAGSKLFRECAYLSCNEAVTEPLYIKSTSVLFSRDPLELPEWVVYQDIVRGEREGAAANMTCVTAVEAGWIPALAEGSPLLSFSEPLVSPPPSYDNENTHSVLCRVTPRYGVHAWELPPHLTELASAAPKSRPDTVFRWFGRLLLEGKVAGCLSELKGKDMLNDPPSLVTREMPTKKVAILVLELRQKGVCSLPALVMQWRRDPAFLKSAIDMWIKLGSKQGYLK 5240
MARSR KG + +KGGK + S TA TA PS+LSPELM ELGD SAGGAM TQ+A++KG NKK+ RV SSETRELAA++SKSKAKKLKQL+DKKLKDGRRAELYLKLE+NRMSQ QLSLLQSSKTISMNQDTLRSR+KQAVQ+AVAG+ALSDA +NELESHPG VAD+E+ LALPVGGALAAAR +S + T AP XXXXXXXXXXXXXXXX K +AA A D++ G +AG+G AG A A+ G AV PLPS SG + G ++ A+LP RP+RWVPVKRP ALQAAR QLPVCGMEQEI EA+H+NDTIILCGETGSGKSTQVPQFLYEAGYAAHGLIGVTQPRRVAAVGTAERVAVELGTKCGKGG VAYQIRYDASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHERNLNTDVLLGMLSRSIPLRKQVA EEQR+W+ML +S+K AK PLRPLKLVIMSATLRV+DFTEN ALFPVPPPVISATSRQHPVTVHFSKRTEL+DY GETFKKVCKIHQRLPEGG+LVF+TGKREI+HMCDKLRREFPP RAGG ++SGSG+T + EE E S D+A XX XXXXXXXXXXXXXXXXXXXXX K GG+ K A+ ++E XXXXXXX XXXXXXXXXXX X XXXXXXX XXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XX D RQAL PPVHVVPLYAMLTAEEQATVFRPPP+GHRL+VVATNVAETSITIPGIAYVVDCGRQKRRVVQRGSGISQFEVGWVSKASADQRAGRAGRTGPGHCYRLYSSALYTQT+EAFAPPE+LTRPLEDVMLQMKAMG+VDVSRFPFPTPPDA GLRSAA LLANLGATAGRG+ G EIT VGKALALLPVGARYAKMLLLAVQGGLLAHAAALVAMLTEGDPFVRPDSAV V+G+ E GEE G AE+VRR RAQWLHPTSDALARLKAAGAYA+AT+GGTA GGGDFC EN+LH PTMDRSLQLRRQLSRLV+LRFGTEPGWK CDVAG LRPPS KQ+DALRQVLL+GLLDNVARRAPAGTVKAGSKLFRECAYLSCNEAVTEPLYIKSTSVLFSRDPLELPEWVVYQDIVRGEREGAAA+MTCVTA+EAGWIPALAEGSPLLSFS+PLVSPPP+YD+E TH+VLCRVTPRYGVH WELPPHLT LAS APK+RPDTVFRWFGRLLLEG VAGCLSEL+ K+MLNDPPSL+TRE PTKKVAILVLELRQ+GVCSLPAL+ +W+RDPA+LK A++MW+KLGS+QG+ K
Sbjct: 1 MARSRGKGGKSLTKGGKASAEES----------TAATAA--PSILSPELMAELGDDSAGGAMVTQSASNKGKNKKRGRVVSSETRELAATISKSKAKKLKQLEDKKLKDGRRAELYLKLEKNRMSQNQLSLLQSSKTISMNQDTLRSRLKQAVQKAVAGVALSDAAINELESHPGPVADIEDALALPVGGALAAARK-----------------------------------------------------------------------------------------------------------------------SSGRTATRAPEXXXXXXXXXXXXXXXXXXXXXX-------------------------------------------------KSVTAAKADDSKRMGSAKAGAGLARDGAAG-----------------ATAN---------GVKEKAEAVVVPLPSASGE----SGYGHPSTGGGASLPPRPKRWVPVKRPVALQAARQQLPVCGMEQEIMEAVHENDTIILCGETGSGKSTQVPQFLYEAGYAAHGLIGVTQPRRVAAVGTAERVAVELGTKCGKGGTVAYQIRYDASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHERNLNTDVLLGMLSRSIPLRKQVADEEQRAWNMLGEDSKKDAKLPLRPLKLVIMSATLRVTDFTENKALFPVPPPVISATSRQHPVTVHFSKRTELYDYSGETFKKVCKIHQRLPEGGILVFMTGKREILHMCDKLRREFPPXXXXXXXXXXXXXXXXXXXXXXXXXKQGEAGXXXKQXXXAKEDRAGGDGEAKESGSGETTRDDMDAAKQAKSPKGKKGXEXXXXXXXXKEPSEGNPVVPEPLQEEEREGSVDAAKTTKSPEXXGKKTNPPKXXXXXXXXXXXXXXXXXXXXXXXXXXXKKGKKXXXXXXXXXXXXXXXXXXXGGDVDAKKAKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNNSTKSKXXXXXXXXXXEEEEKEXXXXXXXXXXXXXXXSKGXXXXXXXXXXXVXEALXXXXXXXDADAXXXXXXXXXXXNKRKLPQEEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYREADXXEEDAARLGDMEEEGADNDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARQAL-PPVHVVPLYAMLTAEEQATVFRPPPDGHRLVVVATNVAETSITIPGIAYVVDCGRQKRRVVQRGSGISQFEVGWVSKASADQRAGRAGRTGPGHCYRLYSSALYTQTMEAFAPPELLTRPLEDVMLQMKAMGVVDVSRFPFPTPPDAVGLRSAAVLLANLGATAGRGSAAASGDSSSGSG----------EITPVGKALALLPVGARYAKMLLLAVQGGLLAHAAALVAMLTEGDPFVRPDSAVA------VKGDGSEEGEEGGGRGDH---AEEVRRIRAQWLHPTSDALARLKAAGAYAFATAGGTATGGGDFCRENYLHGPTMDRSLQLRRQLSRLVELRFGTEPGWKRCDVAGALRPPSSKQSDALRQVLLSGLLDNVARRAPAGTVKAGSKLFRECAYLSCNEAVTEPLYIKSTSVLFSRDPLELPEWVVYQDIVRGEREGAAAHMTCVTAIEAGWIPALAEGSPLLSFSDPLVSPPPTYDSEETHAVLCRVTPRYGVHGWELPPHLTTLASVAPKNRPDTVFRWFGRLLLEGGVAGCLSELRTKEMLNDPPSLLTRERPTKKVAILVLELRQRGVCSLPALLREWQRDPAYLKGAVEMWVKLGSRQGFEK 1617
BLAST of mRNA_P-littoralis_Contig90.103.3 vs. uniprot
Match: A0A1V9ZJ85_9STRA (ATP-dependent RNA helicase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZJ85_9STRA) HSP 1 Score: 745 bits (1924), Expect = 1.040e-236 Identity = 493/1207 (40.85%), Postives = 644/1207 (53.36%), Query Frame = 3
Query: 1707 NAPAYHAVETPLPSTSGMPKNNNNKGSATSRSTANLPRPERWVPVKRPAALQAARMQLPVCGMEQEITEAIHDNDTIILCGETGSGKSTQVPQFLYEAGYA-------AH-----------GLIGVTQPRRVAAVGTAERVAVELGTKCGKGGAVAYQIRYDASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHERNLNTDVLLGMLSRSIPLRKQVAQEEQRSWDMLSTESQKQAKCPLRPLKLVIMSATLRVSDFTENTALFPVPPPVISATSRQHPVTVHFSKRTELFDYVGETFKKVCKIHQRLPEGGVLVFLTGKREIVHMCDKLRREFPPPRAGGGRRKSGSGKTVGAEEVEASTDSADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGELVGGMAKGGEEKGKGARGADRETLLYREADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATRQALLPPVHVVPLYAMLTAEEQATVFRPPPEGHRLIVVATNVAETSITIPGIAYVVDCGRQKRRVVQRGSGISQFEVGWVSKASADQRAGRAGRTGPGHCYRLYSSALYTQTLEAFAPPEVLTRPLEDVMLQMKAMGIVDVSRFPFPTPPDAAGLRSAATLLANLGATAGRGNVPGGGSXXXXXXXXXXXXXXXXEITAVGKALALLPVGARYAKMLLLAVQGGLLAHAAALVAMLTEGDPFVRPDSAVKKKDGGGVEGEPVEHGEEDRGXXXXXXXAEDVRRRRAQWLHPTSDALARLKAAGAYAYATSGGTAVGGGDFCHENFLHAPTMDRSLQLRRQLSRLVDLRFGTEPGWKGCDVAGTLRPPSRKQTDALRQVLLAGLLDNVARRAPAGTVKAGSKLFRECAYLSCNEAVTEPLYIKSTSVLFSRDPLELPEWVVYQDIVRGEREGAAANMTCVTAVEAGWIPALAEGSPLLSFSEPLVSPPPSYDNENTHSVLCRVTPRYGVHAWELPPHLTELASAAPKSRPDTV--------FRWFGRLLLEGKVAGCLSELKGKDMLNDPPSLVTREMPTKKVAILVLELRQKGVCSLPALVMQWRRDPAFLKSAIDMWIKLGSKQGYLKAWP 5249
+AP Y PL +TS M A S + + + VPV R +Q ARMQLPVC EQEI EAI N +ILCGETGSGK+TQVPQFLYEAGY H G+IGVTQPRRVAAV TA+RVA EL GK G+V YQIRYD VG+ TR+KFMTDG+LL+EI D LL+KYS++LLDEAHERN+NTD+L+G+LSR P R Q+A EEQ + L+ E ++ A PL+PLKLVIMSATLRV DFT N LFP PPPVI +RQ+PVTVHF+K TEL DYV ++KV KIH++LP+G +LVFLTG+REI+ +C KLR G +++ K V EA TD+ DG + EL+G E L ++D XXXXX + + + P VHV+PLY+ML +EQ VF PPE HRLIVVATNVAETS+TIPG+ YVVD GR K RV +GIS+F V W+SKASADQRAGRAGRTGPGHCYRLYSSA+Y F+PP++L +P+EDV+LQMKAMGI + FPFPTPP++ L++A +L +LGA + + IT++GK LA PV AR+AKMLL+A + G L + A+VA LT PFV +++ E + E D AE++R+ +QW+ SD L+ L+AAGAYAY SGG+A FC +N LHA M+++L+LR QL+ +V+ F ++P + + + PP+ ++ D +RQ++ AG LD+VA RAP GT+ G+K+ R CAY+SC+ V EP+Y+ S +F+R+P +LP +VVY IVR R A M VTA++A W+ A+A+ SPL SEPL +PPP Y N V C V P YGVH WELP +T S + V +RWF R LL+G V L L L +P + + R+ K+ +LV+ L + G+ S LV QWR++P +L + W+K + KAWP
Sbjct: 270 DAPKYVPAAIPLHTTSEMV--------ALSETLPAVAVKKTLVPVNRIEDIQVARMQLPVCSAEQEIMEAIALNPVVILCGETGSGKTTQVPQFLYEAGYGFDEHNPGCHRFLAQRLIQCVGMIGVTQPRRVAAVSTAQRVATELNVPFGKHGSVGYQIRYDNEHVGQGTRIKFMTDGILLKEIQQDFLLKKYSIILLDEAHERNVNTDILIGLLSRVAPFRAQMAHEEQEMYASLTEEERRTALPPLKPLKLVIMSATLRVEDFTMNKTLFPTPPPVIKVDARQYPVTVHFNKHTELNDYVHAAYQKVSKIHRKLPDGAILVFLTGQREILQLCRKLRHTL-------GSKRTRKVKKVSRRNREA-TDTQDGDWFAREHDDDDEEADVE-------------------EAELLGD-----------------ELLAXDDSDAXXXXXDNDHNPEDD------------------------------------------------------------------------------------------------------------------EGSAENSTPYVHVLPLYSMLANDEQMKVFDAPPEKHRLIVVATNVAETSLTIPGVRYVVDAGRTKERVFDLKTGISEFTVQWISKASADQRAGRAGRTGPGHCYRLYSSAVYENEFPKFSPPQLLCQPIEDVVLQMKAMGIERILDFPFPTPPESVALKAAMMMLMHLGALNEKTDT----------------------ITSLGKTLAQFPVAARFAKMLLIAKEVGCLEYIIAVVASLTGQPPFVLALERKEQEADAEPSPETISPDEMDADMAKEWKEAEEMRKH-SQWVDEESDVLSMLRAAGAYAY--SGGSAA----FCQDNHLHAKIMEQTLKLRGQLTSIVNKLFASDPTYSPVSLRPDMPPPTPEEQDTIRQIVAAGYLDHVAHRAPPGTITEGTKIERNCAYISCSGLVNEPIYVHPHSHVFTREPAKLPPFVVYNTIVRSSR----ACMKTVTAIDAEWLYAIAQSSPLCKLSEPLAAPPPRY-NAALDRVDCFVKPVYGVHQWELPV-VTVGGVVNAVSGNERVEYPAGTMRYRWFARCLLDGAVVSGL--LAYATRLKEPSASILRKKFDAKIQLLVMALERNGISSRRQLVAQWRKNPKYLLDELLKWVKDDYRGMLTKAWP 1273
BLAST of mRNA_P-littoralis_Contig90.103.3 vs. uniprot
Match: A0A6G0XDB3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XDB3_9STRA) HSP 1 Score: 740 bits (1910), Expect = 3.640e-235 Identity = 512/1202 (42.60%), Postives = 632/1202 (52.58%), Query Frame = 3
Query: 1707 NAPAYHAVETPLPSTSGMPKNNNNKGSATSRSTANLPRPERWVPVKRPAALQAARMQLPVCGMEQEITEAIHDNDTIILCGETGSGKSTQVPQFLYEAGYAAH--GLIGVTQPRRVAAVGTAERVAVELGTKCGKGGAVAYQIRYDASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHERNLNTDVLLGMLSRSIPLRKQVAQEEQRSWDMLSTESQKQAKCPLRPLKLVIMSATLRVSDFTENTALFPVPPPVISATSRQHPVTVHFSKRTELFDYVGETFKKVCKIHQRLPEGGVLVFLTGKREIVHMCDKLRREFPPPRAGGGRRKSGSGKTVGAEEV-----EASTDSADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGELVGGMAKGGEEKGKGARGADRETLLYREADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATRQALLPPVHVVPLYAMLTAEEQATVFRPPPEGHRLIVVATNVAETSITIPGIAYVVDCGRQKRRVVQRGSGISQFEVGWVSKASADQRAGRAGRTGPGHCYRLYSSALYTQTLEAFAPPEVLTRPLEDVMLQMKAMGIVDVSRFPFPTPPDAAGLRSAATLLANLGATAGRGNVPGGGSXXXXXXXXXXXXXXXXEITAVGKALALLPVGARYAKMLLLAVQGGLLAHAAALVAMLTEGDPFV----RPDSAVKKKDGGGVEGEPVEHGEEDRGXXXXXXXAEDVRRRRAQWLHPTSDALARLKAAGAYAYATSGGTAVGGGDFCHENFLHAPTMDRSLQLRRQLSRLVDLRFGTEPGWKGCDVAGTLRPPSRKQTDALRQVLLAGLLDNVARRAPAGTVKAGSKLFRECAYLSCNEAVTEPLYIKSTSVLFSRDPLELPEWVVYQDIVRGEREGAAANMTCVTAVEAGWIPALAEGSPLLSFSEPLVSPPPSYDNENTHSVLCRVTPRYGVHAWELPPHLTELASAAPKSRPDTVFRWFGRLLLEGKVAGCLSE-LKGKDMLNDPPSLVTREMPTKKVAILVLELRQKGVCSLPALVMQWRRDPAFLKSAIDMWIKLGSKQGYLKAWPNAIKTAVLA 5276
N P Y LP+T M TS+ A L +R V V R +Q ARMQLPVC EQEI EAI ++ +ILCGETGSGK+TQVPQFLYEAGY G+IGVTQPRRVAAV TA+RVA EL GK GAV YQIRYD VGEKT VKFMTDG+LL+EI D LL+KYS+VLLDEAHERN+NTD+L+G+LSR P R Q+A EE+ +D LS + P+ PLKLVIMSATLRV DFTEN LFP PPPVI +RQ+PVTVHF+K TEL DYVG ++KV KIH++LPEG +LVFLTG+REI+ + +L R R + + + V EE + D AD AD L EAD XXXXXXXXXXXX LP VHV+PLY+ML+ + Q VF PE HRL+VVATNVAETS+TIPG+ YVVD GR K RV SGISQFE+ W+SKASADQRAGRAGRTGPGHCYRLYSSA++ + F+PP++L +P+EDV+LQMKAMGI +V +FPFPTPP+A L +A T L +LGA + + N+ IT +GK LA PV R+AKMLLLA Q G L + ALVA L+ PF+ R ++ V K E E E E D + RR QW++ SD L+ L+AAGAYAY SGG++ FC EN LH M++ L+LR QL+ +V+ G E + + PPS + D LRQ++ AG LD VARR P GT+ +GSK+ R CAYLSCN VTEPLYI S LF+ DP LP++VVY ++VR R A M VTA+E + ++A SPL SEP+ +PPP Y N + V C V P YG H WELP E + K RWFGR LL+G V L L GK L +P + ++ K+ +LV L + V S ALV QW+ +P FL I W++ K + W + V A
Sbjct: 280 NRPKYTPATVELPTTEDM--------LVTSKQVAPLVT-KRRVHVNRKDDIQLARMQLPVCSSEQEIMEAIENHSVVILCGETGSGKTTQVPQFLYEAGYGTERPGMIGVTQPRRVAAVSTAQRVATELNVDFGKTGAVGYQIRYDNEHVGEKTIVKFMTDGILLKEIQQDFLLKKYSIVLLDEAHERNVNTDILIGLLSRVAPFRAQMALEEKEQYDSLSEAERAMTPPPIAPLKLVIMSATLRVEDFTENKTLFPSPPPVIKVEARQYPVTVHFNKHTELNDYVGAAYQKVVKIHRKLPEGAILVFLTGQREIMQLVRQLNRTLGSKRRQVKSKPTNTRNRVQDEEWYIREHDDDDDQAD----------------------------------------------------------ADEADLYGDEADGSDNXXXXXXXXXXXXEPATD-------------------------------------------------------------------------------------------------------------------LPYVHVLPLYSMLSNDLQMKVFDAAPEKHRLVVVATNVAETSLTIPGVRYVVDAGRTKERVYDLKSGISQFEIQWISKASADQRAGRAGRTGPGHCYRLYSSAVFDNEFKKFSPPQILCQPIEDVVLQMKAMGIENVLQFPFPTPPEALALNTAVTTLLHLGALSAKSNM----------------------ITGLGKTLAGFPVAPRFAKMLLLANQLGCLEYTIALVAALSGQSPFILERERKEAEVNK------ENEDEETQESD---WTAEMKEAEAMRRHIQWMNEDSDVLSMLRAAGAYAY--SGGSSA----FCTENHLHEKIMEQMLKLRGQLTTIVNKLLGQE-----LVLRPNMPPPSDDEQDLLRQIIAAGFLDQVARRVPPGTITSGSKIERNCAYLSCNGTVTEPLYIHPHSHLFTPDPSRLPQYVVYNNVVRTSR----AYMKTVTAIEPECLFSVAANSPLCETSEPMQAPPPKY-NASLDRVECFVKPMYGNHKWELPAAQVEFPAGQVK------MRWFGRFLLDGAVVPSLKPFLVGK--LREPSMSLIKKKFDAKIQLLVSTLARHNVASRKALVAQWQSNPRFLLDEILNWVQDNHKASLKQQWKTLVAKEVQA 1244
BLAST of mRNA_P-littoralis_Contig90.103.3 vs. uniprot
Match: W4FJS1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FJS1_9STRA) HSP 1 Score: 740 bits (1911), Expect = 1.220e-234 Identity = 503/1171 (42.95%), Postives = 630/1171 (53.80%), Query Frame = 3
Query: 1824 ERWVPVKRPAALQAARMQLPVCGMEQEITEAIHDNDTIILCGETGSGKSTQVPQFLYEAGYAAHGL----IGVTQPRRVAAVGTAERVAVELGTKCGKGGAVAYQIRYDASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHERNLNTDVLLGMLSRSIPLRKQVAQEEQRSWDMLSTESQKQAKCPLRPLKLVIMSATLRVSDFTENTALFPVPPPVISATSRQHPVTVHFSKRTELFDYVGETFKKVCKIHQRLPEGGVLVFLTGKREIVHMCDKLRREFPPPRAGGGRRKSGSGKTVGAEEVEASTDSADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGELVGGMAKGGEEKGKGARGADRETLLYREADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATRQALLPPVHVVPLYAMLTAEEQATVFRPPPEGHRLIVVATNVAETSITIPGIAYVVDCGRQKRRVVQRGSGISQFEVGWVSKASADQRAGRAGRTGPGHCYRLYSSALYTQTLEAFAPPEVLTRPLEDVMLQMKAMGIVDVSRFPFPTPPDAAGLRSAATLLANLGATAGRGNVPGGGSXXXXXXXXXXXXXXXXEITAVGKALALLPVGARYAKMLLLAVQGGLLAHAAALVAMLTEGDPFV----RPDSAVKKK-----------DGGGVEGEPVEHGEEDRGXXXXXXXAEDVRRRRAQWLHPTSDALARLKAAGAYAYATSGGTAVGGGDFCHENFLHAPTMDRSLQLRRQLSRLVDLRFGTEPGWKGCDVAGTLRPPSRKQTDALRQVLLAGLLDNVARRAPAGTVKAGSKLFRECAYLSCNEAVTEPLYIKSTSVLFSRDPLELPEWVVYQDIVRGEREGAAANMTCVTAVEAGWIPALAEGSPLLSFSEPLVSPPPSYDNENTHSVLCRVTPRYGVHAWELPPHLTELASAAPKSRPDTVFRWFGRLLLEGKVAGCLSELKGKDMLNDPPSLVTREMPTKKVAILVLELRQKGVCSLPALVMQWRRDPAFLKSAIDMWIKLGSKQGYLKAWPNAIKTAVLAL 5279
+R V V R A+Q RMQLPVC EQEI EAI N +ILCGETGSGK+TQVPQFLYEAGY G+ IGVTQPRRVAAV TA+RVA EL GK G+V YQIRYD VG+ TR+KFMTDG+LL+EI D LL+KYS++LLDEAHERN+NTD+L+G+LSR P R Q+A EE+ ++ LS + A P++PLKLVIMSATLRV DFTEN LFP PPPVI +RQ+PVTVHF+K TE+ DYV ++KV KIH++LPEG +LVFLTG+REI+ + +LRR G G++K+ + T ++ E RE D XXXXXXXXXXXXXXXXXXXXX + L P VHV+PLY+ML +EQ VF PP HRL++VATNVAETS+T+PG+ YVVD GR K RV SGISQFE+ W+SKASADQRAGRAGRTGPGHCYRLYSSA+Y + F+PP++L +P+EDV+LQMKAMGI ++ +FPFPTPP+ L +A T L +LGA N IT +GK LA PV R+AKMLLLA Q G L +A A+VA LT PF+ R ++ +K D E + E + D AE ++R AQW+ SD L+ L+AAGAYAY SGG++V FC EN LH M++ L+LR QL+ +V+ T G + + PPS D LRQ+L AG LD VARR PAGT+ +G+K+ R CAY+SCN VTEPLYI S LF+ +P +LP++VVY +IVR R A M VTA+E W+ A+A SPL SEPL +PPP Y N V C V P YG + WELP L E + K FRWFGR LL+G V L L + SL+ ++ K + +LV L + V S ALV QW+ +P FL + W++ K + W + V AL
Sbjct: 337 QRKVTVTRVEAIQLGRMQLPVCNAEQEIMEAIESNSVVILCGETGSGKTTQVPQFLYEAGYGTDGMHPGMIGVTQPRRVAAVSTAQRVATELNVPFGKRGSVGYQIRYDNDHVGDSTRIKFMTDGILLKEIQQDFLLKKYSIILLDEAHERNVNTDILIGLLSRVAPFRAQMAIEEKEHFESLSAAEKAAAPAPIQPLKLVIMSATLRVEDFTENKTLFPSPPPVIKVEARQYPVTVHFNKHTEMNDYVQAAYQKVVKIHRKLPEGAILVFLTGQREILQLVRQLRRNL-----GSGKKKNKAPATNSRNRMQD-------------------------------------------------------------------EAWYIREHDDDDDQADLDDADVYGEETGXXXXXXXXXXXXXXXXXXXXX---------------------------------------------------------------------------------------------EDLFPYVHVLPLYSMLANDEQMKVFEAPPAKHRLVIVATNVAETSLTLPGVRYVVDAGRTKERVFDLKSGISQFEIQWISKASADQRAGRAGRTGPGHCYRLYSSAVYDNEFQKFSPPQILCQPIEDVVLQMKAMGIENILQFPFPTPPEELALHTAVTTLLHLGALHRTTNT----------------------ITGLGKTLAGFPVAPRFAKMLLLAQQVGCLEYAIAVVASLTGQSPFILERERKEAESYRKEANDEDKLPSIDAESSEPQKNEMTQVDNAWTEELKEAEAMQRH-AQWMDDDSDVLSMLRAAGAYAY--SGGSSV----FCTENHLHEKVMEQMLKLRSQLTNIVNKL--TVGGHAAVTLRPNMPPPSDHDQDMLRQILAAGFLDQVARRVPAGTITSGTKIERNCAYMSCNGIVTEPLYIHPHSHLFTTNPSKLPQYVVYSNIVRTSR----AYMKTVTAIEPDWLHAVAADSPLCDTSEPLDAPPPKY-NAALDRVECYVKPTYGSYKWELPAVLVEYPAGPVK------FRWFGRFLLDGLVVSALKPLLATKLREPSVSLIKKKFDAK-IQLLVSALERSNVSSRRALVAQWQCNPQFLCEQVLNWVQDNHKAALKQHWNALVMRQVQAL 1299
BLAST of mRNA_P-littoralis_Contig90.103.3 vs. uniprot
Match: A0A485L2E9_9STRA (Aste57867_15113 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L2E9_9STRA) HSP 1 Score: 739 bits (1908), Expect = 1.540e-234 Identity = 475/1151 (41.27%), Postives = 619/1151 (53.78%), Query Frame = 3
Query: 1833 VPVKRPAALQAARMQLPVCGMEQEITEAIHDNDTIILCGETGSGKSTQVPQFLYEAGYAAHGL----IGVTQPRRVAAVGTAERVAVELGTKCGKGGAVAYQIRYDASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHERNLNTDVLLGMLSRSIPLRKQVAQEEQRSWDMLSTESQKQAKCPLRPLKLVIMSATLRVSDFTENTALFPVPPPVISATSRQHPVTVHFSKRTELFDYVGETFKKVCKIHQRLPEGGVLVFLTGKREIVHMCDKLRREFPPPRAGGGRRKSGSGKTVGAEEVEASTDSADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGELVGGMAKGGEEKGKGARGADRETLLYREADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATRQALLPPVHVVPLYAMLTAEEQATVFRPPPEGHRLIVVATNVAETSITIPGIAYVVDCGRQKRRVVQRGSGISQFEVGWVSKASADQRAGRAGRTGPGHCYRLYSSALYTQTLEAFAPPEVLTRPLEDVMLQMKAMGIVDVSRFPFPTPPDAAGLRSAATLLANLGATAGRGNVPGGGSXXXXXXXXXXXXXXXXEITAVGKALALLPVGARYAKMLLLAVQGGLLAHAAALVAMLTEGDPFV----RPDSAVKKKDGGGVEGEPVEHGEEDRGXXXXXXXAE-DVRRRRAQWLHPTSDALARLKAAGAYAYATSGGTAVGGGDFCHENFLHAPTMDRSLQLRRQLSRLVDLRFGTEPGWKGCDVAGTLRPPSRKQTDALRQVLLAGLLDNVARRAPAGTVKAGSKLFRECAYLSCNEAVTEPLYIKSTSVLFSRDPLELPEWVVYQDIVRGEREGAAANMTCVTAVEAGWIPALAEGSPLLSFSEPLVSPPPSYDNENTHSVLCRVTPRYGVHAWELPPHLTELASAAPKSRP--DTVFRWFGRLLLEGKVAGCLSE-LKGKDMLNDPPSLVTREMPTKKVAILVLELRQKGVCSLPALVMQWRRDPAFLKSAIDMWIKLGSKQGYLKAWP 5249
V V+R ++Q ARMQLPVC EQEI EAI + +ILCGETGSGK+TQVPQFLYEAGY G+ IGVTQPRRVAAV TAERVA EL G+ G V YQIRYD VG+KTRVKFMTDG+LL+EI +D LL+KYSVVLLDEAHERN+NTD+L+G+LSR P R Q+A+EE +D L+ + P++PLKLVIMSATLRV DFTEN LFP PPPVI +RQ+PVTVHF+K TE+ DYV ++KV KIH++LPEG +LVFLTG+REI+ + +L+R G ++K A+ +A T++ + + ++ G + +D + EAD T + P VHV+PLY+ML ++Q VF+ PP+ HRLIVVATNVAETS+TIPG+ YVVD GR K RV SGISQFE+ W+SKASADQRAGRAGRTGPGHCYRLYSSA++ + F+PP++L +P+EDV+LQMKAMGI ++ +FPFPTPP+ L++A T L +LGA + N+ IT +GK+LA PV R+AKMLLLA Q G L +A A+V+ L+ PF+ R ++ KD + E + E + E + +R QW+ SD L+ L+AAGAYAY SGG++ FC EN LH M++ L+LR QL+ +V+ G G + + + PPS + D LRQ++ AG LD VARR PAGT+ G+K+ R CAY+SCN + EPLYI S LF+ DP LP++VVY ++VR R A M VTAVE W+ ++A SPL SEPL +PPP + N V C V P YG H WELP L A+ + P RWFGR LL+G V GK L +P + ++ K+ +LV L + V S ALV QW+R+P FL++ I W++ K + WP
Sbjct: 314 VHVRRVESIQLARMQLPVCSSEQEIMEAIETHSVVILCGETGSGKTTQVPQFLYEAGYGTEGMHPGMIGVTQPRRVAAVSTAERVATELNVAFGRHGTVGYQIRYDNEHVGDKTRVKFMTDGILLKEIQTDFLLKKYSVVLLDEAHERNVNTDILIGLLSRVAPFRAQMAKEENEHYDSLTDAEKATTPLPIQPLKLVIMSATLRVEDFTENKTLFPSPPPVIKVEARQYPVTVHFNKHTEMNDYVRAAYQKVVKIHRKLPEGAILVFLTGQREILQLVRQLKRSL------GSKQK--------AKTKKAPTNTRN---------------RVQNEAWYIREHDDDDEQADVEEADMYGDDGENDNSD------SDEVEDGFEEADE----------------------------------------------------------------------------------------------------------------------------------TDENPFPYVHVLPLYSMLANDDQMKVFQAPPDKHRLIVVATNVAETSLTIPGVRYVVDAGRTKERVFDLKSGISQFEIQWISKASADQRAGRAGRTGPGHCYRLYSSAVFDNEFKKFSPPQILCQPIEDVVLQMKAMGIENILQFPFPTPPEELALQTAVTTLLHLGALHHKSNM----------------------ITGLGKSLAGFPVAPRFAKMLLLAKQLGCLEYAIAVVSSLSGQSPFILERERKEAETHAKDDEAADDETNKTNEPAQIDDWTAEMKEAEAMQRHVQWMDDDSDVLSMLRAAGAYAY--SGGSSA----FCTENHLHEKIMEQMLKLRGQLTVIVNKLVGDSLG-EPLTLRPNMPPPSEDEQDLLRQIIAAGFLDQVARRVPAGTITTGTKIERNCAYMSCNGTMIEPLYIHPHSHLFTPDPSRLPQYVVYNNVVRTAR----AYMKTVTAVEPEWLFSIASNSPLCETSEPLQAPPPKF-NVAADRVECFVKPVYGAHKWELPAVLVRAATVSTVEFPAGSVKMRWFGRFLLDGIVVPSFKPYFVGK--LREPSLSLIKKKFDAKIQVLVSTLERTNVASRKALVAQWKRNPQFLQAEILNWVQDNHKPELKRQWP 1263
BLAST of mRNA_P-littoralis_Contig90.103.3 vs. uniprot
Match: T0QSZ9_SAPDV (Adenosinetriphosphatase n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QSZ9_SAPDV) HSP 1 Score: 736 bits (1901), Expect = 1.100e-233 Identity = 508/1193 (42.58%), Postives = 654/1193 (54.82%), Query Frame = 3
Query: 1707 NAPAYHAVETPLPSTSGMPKNNNNKGSATSRSTANLPRPERWVPVKRPAALQAARMQLPVCGMEQEITEAIHDNDTIILCGETGSGKSTQVPQFLYEAGYAAH----GLIGVTQPRRVAAVGTAERVAVELGTKCGKGGAVAYQIRYDASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHERNLNTDVLLGMLSRSIPLRKQVAQEEQRSWDMLSTESQKQAKCPLRPLKLVIMSATLRVSDFTENTALFPVPPPVISATSRQHPVTVHFSKRTELFDYVGETFKKVCKIHQRLPEGGVLVFLTGKREIVHMCDKLRREFPPPRAGGGRRKSGSGKTVGAEEVEASTDSADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGELVGGMAKGGEEKGKGARGADRETLLYREADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATRQALLPPVHVVPLYAMLTAEEQATVFRPPPEGHRLIVVATNVAETSITIPGIAYVVDCGRQKRRVVQRGSGISQFEVGWVSKASADQRAGRAGRTGPGHCYRLYSSALYTQTLEAFAPPEVLTRPLEDVMLQMKAMGIVDVSRFPFPTPPDAAGLRSAATLLANLGATAGRGNVPGGGSXXXXXXXXXXXXXXXXEITAVGKALALLPVGARYAKMLLLAVQGGLLAHAAALVAMLTEGDPFVRPDSAVKKKD---GGGVEGEPVEHGEEDRGXXXXXXXAEDVRRRRAQWLHPTSDALARLKAAGAYAYATSGGTAVGGGDFCHENFLHAPTMDRSLQLRRQLSRLVDLRFGTEPGWKGCDVAGTLRPPSRKQTDALRQVLLAGLLDNVARRAPAGTVKAGSKLFRECAYLSCNEAVTEPLYIKSTSVLFSRDPLELPEWVVYQDIVRGEREGAAANMTCVTAVEAGWIPALAEGSPLLSFSEPLVSPPPSYDNENTHSVLCRVTPRYGVHAWELPPHLTELASAAPKSRPDTVFRWFGRLLLEGKVAGCLSELKGKDMLNDPPSLVTREMPTKKVAILVLELRQKGVCSLPALVMQWRRDPAFLKSAIDMWIKLGSKQGYLKAWPNAIKT 5264
+AP Y PLP+TS M A + + + + V V R ++Q +RMQLPVC EQEI EAI + +ILCGETGSGK+TQVPQFLYEAGY G+IGVTQPRRVAAV TA+RVA EL GK G+V YQIRYD VG++TR+KFMTDG+LL+EI D LL+KYS++LLDEAHERN+NTD+L+G+LSR P R Q+A EEQ + ++ E + A PL+PLKLVIMSATLRV DFT N LFP PPPVI +RQ+PV+VHF+K TEL DYV ++KV KIH++LP+G +LVFLTG+REI+ +C KLRR G + A+ + +G A+ + RE D XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + + + P VHV+PLY+ML +EQ VF PP HRLIVVATNVAETS+TIPG+ YVVD GR K RV +GIS+F+V W+SKASADQRAGRAGRTGPGHCYRLYSSA+Y F+PP++LT+P+EDV+LQMKAMGI + FPFPTPP+A L++A T L +LGA IT++G+ LAL PV AR+AKMLL+A Q G L + A+VA LT PFV AV++KD EPV EE + R+ +QW+ SD L L+AAGAYAY SG + FC EN LHA M++ L+LR QL+ +V+ F ++ + + + PPS ++ D +RQ++ AG LD+VA RAP GT+ G+K+ R CAY+SC+ V EP+YI S +F+R+P +LP +VVY IVR R A M VT++E W+ A+A+ SPL SEPL +P P Y N V C V P YGVH WELP E + + RWF R LL+G V L L L +P + + R+ K+ +LV+ L + + + L QW+++P FL + W+K K KAWP+ ++T
Sbjct: 270 DAPKYVPAAVPLPTTSEMV--------AIAETLPVVAVKKTLVAVNRIESIQLSRMQLPVCSSEQEIMEAISLHPVVILCGETGSGKTTQVPQFLYEAGYGFDEHNPGMIGVTQPRRVAAVSTAQRVATELNVPFGKHGSVGYQIRYDNEHVGQQTRIKFMTDGILLKEIQQDFLLKKYSIILLDEAHERNVNTDILIGLLSRVAPFRAQMAAEEQEMYASMTPEERASAPPPLKPLKLVIMSATLRVEDFTMNKTLFPSPPPVIKVDARQYPVSVHFNKHTELNDYVHAAYQKVSKIHRKLPDGAILVFLTGQREILQLCRKLRRTM---------------------------------------------------------------------GSKITRKARKLSRRNQGESDAN-DDWFAREHDDDDEEADVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDE---------------------------------------------------------------------------------------EGSTENSTPYVHVLPLYSMLANDEQMKVFEAPPPKHRLIVVATNVAETSLTIPGVRYVVDAGRTKERVFDLKTGISEFQVQWISKASADQRAGRAGRTGPGHCYRLYSSAVYENEFPKFSPPQLLTQPIEDVILQMKAMGIERILNFPFPTPPEAVALKAAMTTLMHLGAL----------------------NMENDTITSLGRTLALFPVAARFAKMLLIAKQVGCLEYIIAVVASLTGQPPFVL---AVERKDQEADADAPDEPVISPEEMSDDMAKEWKEAEEMRKHSQWVDEESDVLGMLRAAGAYAY--SGASPA----FCDENHLHAKIMEQMLKLRSQLTLIVNKLFASDASYTPVALHPNMPPPSPEEQDTIRQIVAAGYLDHVAHRAPPGTITEGTKIERNCAYVSCSGIVNEPIYIHPHSHVFTREPAKLPSFVVYNTIVRSSR----ACMKTVTSIEPDWLFAIAQSSPLCKLSEPLTAPAPRY-NAALDRVDCFVKPVYGVHQWELPVVTVEYPAGTMR------VRWFARCLLDGAVVPSL--LPFATRLKEPSASLLRKKFDAKIQLLVMALERNDIATRATLSAQWKKNPKFLLDELLKWVKDEHKTSLTKAWPSIVQT 1253
BLAST of mRNA_P-littoralis_Contig90.103.3 vs. uniprot
Match: A0A1V9YYF6_9STRA (ATP-dependent RNA helicase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YYF6_9STRA) HSP 1 Score: 739 bits (1908), Expect = 1.820e-232 Identity = 474/1163 (40.76%), Postives = 617/1163 (53.05%), Query Frame = 3
Query: 1713 PAYHAVETPLPSTSGMPKNNNNKGSATSRSTANLPRPERWVPVKRPAALQAARMQLPVCGMEQEITEAIHDNDTIILCGETGSGKSTQVPQFLYEAGYAAH----GLIGVTQPRRVAAVGTAERVAVELGTKCGKGGAVAYQIRYDASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHERNLNTDVLLGMLSRSIPLRKQVAQEEQRSWDMLSTESQKQAKCPLRPLKLVIMSATLRVSDFTENTALFPVPPPVISATSRQHPVTVHFSKRTELFDYVGETFKKVCKIHQRLPEGGVLVFLTGKREIVHMCDKLRREFPPPRAGGGRRKSGSGKTVGAEEVEASTDSADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGELVGGMAKGGEEKGKGARGADRETLLYREADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATRQALLPPVHVVPLYAMLTAEEQATVFRPPPEGHRLIVVATNVAETSITIPGIAYVVDCGRQKRRVVQRGSGISQFEVGWVSKASADQRAGRAGRTGPGHCYRLYSSALYTQTLEAFAPPEVLTRPLEDVMLQMKAMGIVDVSRFPFPTPPDAAGLRSAATLLANLGATAGRGNVPGGGSXXXXXXXXXXXXXXXXEITAVGKALALLPVGARYAKMLLLAVQGGLLAHAAALVAMLTEGDPFVRP-DSAVKKKDGGGVEGEPVEHGEEDRGXXXXXXXAEDVRRRRAQWLHPTSDALARLKAAGAYAYATSGGTAVGGGDFCHENFLHAPTMDRSLQLRRQLSRLVDLRFGTEPGWKGCDVAGTLRPPSRKQTDALRQVLLAGLLDNVARRAPAGTVKAGSKLFRECAYLSCNEAVTEPLYIKSTSVLFSRDPLELPEWVVYQDIVRGEREGAAANMTCVTAVEAGWIPALAEGSPLLSFSEPLVSPPPSYDNENTHSVLCRVTPRYGVHAWELPPHLTELASAAPKSRPDTVFRWFGRLLLEGKVAGCLSELKGKDMLNDPPSLVTREMPTKKVAILVLELRQKGVCSLPALVMQWRRDPAFL 5186
P Y PL +TS M A S S + ++ VPV R +Q ARMQLPVC EQEI EAI N +ILCGETGSGK+TQVPQFLYE+GY G+IGVTQPRRVAAV TA+RVA EL + GK G+V YQIRYD VG TR+KFMTDG+LL+EI D LL+KYS++LLDEAHERN+NTD+L+G+LSR P R Q+AQEEQ + L+ E + A PL+PLKLVIMSATLRV DFT N LFP PPPVI +RQ+PV+VHF+K TEL DYV ++KV KIH++LP+G +LVFLTG+REI+ +C KLR+ G ++ K + + D + EL+G E + ++ E E D + + + P VHV+PLY+ML +EQ VF PPE HRLIVVATNVAETS+TIPG+ YVVD GR K RV +GIS+F+V W+SKASADQRAGRAGRTGPGHCYRLYSSA+Y F+PP++L +P+EDV+LQMKAMGI + FPFPTPP++ L+SA +L +LGA IT++GK LA PV AR+AKMLL+A Q G L + A+VA LT PFV + K+ D GE + E D AE++R+ QW+ SD L+ L+AAGAYAY SGG++ FC EN LHA M++ L+LR QL+ +V+ F +E + + + PPS ++ D +RQ++ AG LD+VA RAP GT+ G+K+ R CAY+SC+ V EPLYI S +F+R+P +LP +VVY +VR R A M VTA+E WI A+A+ SPL S+PL +P P Y N + C V P YGVH WELP E + + +RWF R LL+G + L L L +P + + R+ K+ +LV+ L + + S L QW+R+P+ +
Sbjct: 209 PKYVPEAIPLHTTSEMV--------ALSESLPTIEIKKKLVPVHRKEDIQLARMQLPVCSSEQEIMEAISLNPVVILCGETGSGKTTQVPQFLYESGYGFDEHNPGMIGVTQPRRVAAVSTAQRVATELNVEFGKNGSVGYQIRYDNEHVGNNTRIKFMTDGILLKEIQQDFLLKKYSIILLDEAHERNVNTDILIGLLSRVAPFRAQMAQEEQEMYASLTDEERLAAPAPLKPLKLVIMSATLRVEDFTMNKTLFPTPPPVIKVDARQYPVSVHFNKVTELNDYVHAAYQKVSKIHRKLPDGAILVFLTGQREILQLCRKLRQTM-------GSNRTRKVKKISRRNRDEKNDR----------------------DWFAREHDDDDEEADVEEAELLGDELFADESDAQSD--SEEENENNPEDD---------------------------------------------------------------------------------------------------------------------------------EGSTENSTPYVHVLPLYSMLANDEQMKVFEAPPEKHRLIVVATNVAETSLTIPGVRYVVDAGRTKERVYDLKTGISEFKVQWISKASADQRAGRAGRTGPGHCYRLYSSAVYENEFPKFSPPQLLCQPIEDVVLQMKAMGIERILNFPFPTPPESVALKSAMAMLVHLGAL----------------------NMTNDTITSLGKTLAQFPVAARFAKMLLIAKQVGCLEYVIAVVASLTGQSPFVLALERKEKEADELEQNGETISPEEMDEDMAKEWKEAEEMRKH-GQWIDEESDVLSMLRAAGAYAY--SGGSSA----FCEENHLHAKVMEQMLKLRSQLTTIVNKLFASEADYTPISLRPNMPPPSPEEQDTIRQIVAAGYLDHVAHRAPPGTITEGTKIERNCAYISCSGLVNEPLYIHPHSHVFTREPSKLPPYVVYNTVVRSSR----ACMKTVTAIEPDWIYAIAQNSPLCKLSDPLPTPAPRY-NAKLDRIDCFVKPVYGVHQWELPVVQVEYPAGTIR------YRWFARCLLDGTIVPSL--LPFATRLKEPSASILRKQFDAKIQLLVMALERNNISSKSKLKQQWQRNPSLM 1161
BLAST of mRNA_P-littoralis_Contig90.103.3 vs. uniprot
Match: H3G5V7_PHYRM (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=H3G5V7_PHYRM) HSP 1 Score: 724 bits (1869), Expect = 5.010e-230 Identity = 474/1151 (41.18%), Postives = 623/1151 (54.13%), Query Frame = 3
Query: 1833 VPVKRPAALQAARMQLPVCGMEQEITEAIHDNDTIILCGETGSGKSTQVPQFLYEAGY------AAHGLIGVTQPRRVAAVGTAERVAVELGTKCGKG-GAVAYQIRYDASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHERNLNTDVLLGMLSRSIPLRKQVAQEEQRSWDMLSTESQKQAKCPLRPLKLVIMSATLRVSDFTENTALFPVPPPVISATSRQHPVTVHFSKRTELFDYVGETFKKVCKIHQRLPEGGVLVFLTGKREIVHMCDKLRREFPPPRAGGGRRKSGSGKTVGAEEVEASTDSADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGELVGGMAKGGEEKGKGARGADRETLLYREADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATRQALLPPVHVVPLYAMLTAEEQATVFRPPPEGHRLIVVATNVAETSITIPGIAYVVDCGRQKRRVVQRGSGISQFEVGWVSKASADQRAGRAGRTGPGHCYRLYSSALYTQTLEAFAPPEVLTRPLEDVMLQMKAMGIVDVSRFPFPTPPDAAGLRSAATLLANLGATAGRGNVPGGGSXXXXXXXXXXXXXXXXEITAVGKALALLPVGARYAKMLLLAVQGGLLAHAAALVAMLTEGDPFVRP-DSAVKKKDGGGVEGEPVEHGEEDRGXXXXXXXAEDVRRRRAQWLHPTSDALARLKAAGAYAYATSGGTAVGGGDFCHENFLHAPTMDRSLQLRRQLSRLVDLRFGTEPGWKGCDVAGTLRPPSRKQTDALRQVLLAGLLDNVARRAPAGTVKAGSKLFRECAYLSCNEAVTEPLYIKSTSVLFSRDPLELPEWVVYQDIVRGEREGAAANMTCVTAVEAGWIPALAEGSPLLSFSEPLVSPPPSYDNENTHSVLCRVTPRYGVHAWELPPHLTELASAAPKSRPDTV---FRWFGRLLLEGKVAGCLSELKGKDMLNDPPSLVTREMPTKKVAILVLELRQKGVCSLPALVMQWRRDPA--FLKSAIDMWIKLGSKQGYLKAW 5246
V + R +Q ARMQLPVC EQEI EAI +ND IILCGETGSGK+TQVPQFLYEAGY + G IGVTQPRRVAAV TA+RVA EL G G V YQIRYDA V E TR+KFMTDG+LL+EI D LLR+YS++LLDEAHERN+NTD+L+G+LSR PLR Q+++EE+ ++ LS E +K A+ P++PLKLV+MSATLRV DFT+N LFP PPPV+ +RQ+PV+VHF+KRTE+ +YV E +KKV KIH++LPEGGVLVFLTG+REI+ +C KL R + S + A+ ++ + D + +L G E D E Y D X XXXXXXXXX D + +P +HV+PLY++L +EQ VF PPE HRLIVVATNVAETS+TIPGI YVVD GR K RV +GIS FEV W+SKASADQRAGRAGRTGPGHCYRLYSSA+Y + F+ PE+L +P++D++LQMKAMGI +V +FPFPTPPD +++A L NLGA + PG IT +G+AL PV AR+AKMLLLA + L+ + A+VA L+ PF+ D K+K EGE + E + AE++R+ AQW+ SD L+ L+AAGAYAY +GG++ FC +N LH TM L+LR+QL+R+V+ + E G++ D+ + PP + LRQ++ AG LD VA+R PAGT+ G+K+ R CAY++ V EP+YI S +F+ +P +LP +VVYQ I+R R A M VTA+E W+ + + +PL ++ PL P P Y E V C +YG+H W LP D + +RWF + LL+G+V L G L +P + R+ KK+ +LV +L+Q V S ALV +W FLK+ + WIK + + +AW
Sbjct: 217 VTLSRKPEIQLARMQLPVCSSEQEIMEAITENDVIILCGETGSGKTTQVPQFLYEAGYGHPEHQSNSGRIGVTQPRRVAAVSTAKRVAEELNVPFGAPKGHVGYQIRYDAEHVSEHTRIKFMTDGILLKEIQQDFLLRQYSILLLDEAHERNVNTDILIGLLSRIAPLRAQMSREEEEAYQSLSDEEKKTAEKPIKPLKLVVMSATLRVEDFTQNHRLFPTPPPVLRVDARQYPVSVHFNKRTEIDNYVDEAYKKVIKIHKKLPEGGVLVFLTGQREILQLCRKLSRAYSVAARNKKAAALKSSRAFRAQRRQSKPEQTDNFLREHDDIEE--------------------------EADLEEAQVYGNE--------VDDEDAAYDLEDKXHXXXXXXXXXE--------------------------------------------------------------------------------------------------------------------DMDDELAVPYLHVLPLYSLLPNDEQMKVFDTPPENHRLIVVATNVAETSLTIPGIKYVVDAGRTKERVFDLANGISSFEVQWISKASADQRAGRAGRTGPGHCYRLYSSAVYDTEFQKFSSPEILCQPIDDLVLQMKAMGIHNVQQFPFPTPPDRQAVKNALATLVNLGAVS-----PG----------------DDESITGLGRALVKFPVAARFAKMLLLAQKLNLVEYTIAIVAGLSGHSPFIHALDRREKEKGAEDEEGEDEKKNEMEE-MEKEWREAEEMRKH-AQWIDQESDVLSLLRAAGAYAY--TGGSS----QFCKDNHLHEKTMQNMLKLRQQLTRIVNKLYTEEAGFERIDLKPKMPPPDLETQVVLRQIVAAGFLDQVAKRVPAGTITEGTKIERNCAYIAATGNVKEPVYIHPHSSVFTPNPSKLPPFVVYQHIMRTTR----AYMKMVTAIEPQWLAGIGKNTPLCKYAPPLTEPAPFYHPE-LDEVQCYAKAQYGIHQWSLPAMRIMYPDQDASDSKDGLAAKYRWFAKFLLDGQVIPSLLPFSGA--LKEPSHTLIRKKFDKKIQLLVAKLQQHRVASRRALVAKWSSSDGKLFLKAELQSWIKDSHQNAFSQAW 1181
BLAST of mRNA_P-littoralis_Contig90.103.3 vs. uniprot
Match: A0A225VN40_9STRA (ATP-dependent RNA helicase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VN40_9STRA) HSP 1 Score: 723 bits (1866), Expect = 9.590e-230 Identity = 471/1164 (40.46%), Postives = 635/1164 (54.55%), Query Frame = 3
Query: 1833 VPVKRPAALQAARMQLPVCGMEQEITEAIHDNDTIILCGETGSGKSTQVPQFLYEAGYAA------HGLIGVTQPRRVAAVGTAERVAVELGTKCGKG-GAVAYQIRYDASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHERNLNTDVLLGMLSRSIPLRKQVAQEEQRSWDMLSTESQKQAKCPLRPLKLVIMSATLRVSDFTENTALFPVPPPVISATSRQHPVTVHFSKRTELFDYVGETFKKVCKIHQRLPEGGVLVFLTGKREIVHMCDKLRREFPPPRAGGGRRKSGSGKTVGAEEVEASTDSADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGELVGGMAKGGEEKGKGARGADRETLLYREADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATRQALLPPVHVVPLYAMLTAEEQATVFRPPPEGHRLIVVATNVAETSITIPGIAYVVDCGRQKRRVVQRGSGISQFEVGWVSKASADQRAGRAGRTGPGHCYRLYSSALYTQTLEAFAPPEVLTRPLEDVMLQMKAMGIVDVSRFPFPTPPDAAGLRSAATLLANLGATAGRGNVPGGGSXXXXXXXXXXXXXXXXEITAVGKALALLPVGARYAKMLLLAVQGGLLAHAAALVAMLTEGDPFVRP------DSAVKKKDGGGVEGEPVEHGEEDRGXXXXXXXAEDVRRRRAQWLHPTSDALARLKAAGAYAYATSGGTAVGGGDFCHENFLHAPTMDRSLQLRRQLSRLVDLRFGTEPGWKGCDVAGTLRPPSRKQTDALRQVLLAGLLDNVARRAPAGTVKAGSKLFRECAYLSCNEAVTEPLYIKSTSVLFSRDPLELPEWVVYQDIVRGEREGAAANMTCVTAVEAGWIPALAEGSPLLSFSEPLVSPPPSYDNENTHSVLCRVTPRYGVHAWELPPHLTELASAAPKSRPDTV---FRWFGRLLLEGKVAGCLSELKGKDMLNDPPSLVTREMPTKKVAILVLELRQKGVCSLPALVMQWRRDPA--FLKSAIDMWIKLGSKQGYLKAWPNAIKTAV 5270
V + R +Q ARMQLPVC EQEI EAI +ND IILCGETGSGK+TQVPQFLYEAGY G IGVTQPRRVAAV TA+RVA EL G G V YQIRYDA V E TR+KFMTDG+LL+EI D LLR+YS++LLDEAHERN+NTD+L+G+LSR PLR Q+++EE+ ++ +LS E ++ A+ P++PLKLVIMSATLRV DFT+N LFP PPPV+ +RQ+PVTVHF+KRTEL +YV E +KKV KIH++LPEGGVLVFLTG+REI+ +C KL R + +V A + +A+ XXXXXXXXXXX + + + R +++ +L D + +P +HV+PLY++L +EQ VF PPE HRL+VVATNVAETS+TIPGI YVVD GR K RV +GIS FEV W+SKASADQRAGRAGRTGPGHCYRLYSSA+Y + F+ PE+L +P++D++LQMKAMGI +VS+FPFPTPPD +++A L NLGA + PG IT +G++L PV AR+AKMLLLA + L+ + A+VA L+ PF+ + V ++DG G + E E +E R AE++R+ AQW+ SD L+ L+AAGAYAY +GG++ FC +N LH TM L+LR+QL+R+V+ + + G+ ++ + PP + LRQ++ AG LD VA+R PAGT+ G+K+ R CAY++ V EP+YI S +F+ +P +LP++VVYQ I+R R A M VTA+E W+ + + +PL ++ PL P P Y + + V C +YG+H W LP D + +RWF + LL+G+V L L + L +P + R+ KK+ +LV +L+Q + S ALV +W FLK+ + WIK + + ++W + +KTAV
Sbjct: 175 VTLSRKPDIQMARMQLPVCSSEQEIMEAITENDVIILCGETGSGKTTQVPQFLYEAGYGHPDHPTNSGRIGVTQPRRVAAVSTAKRVAEELNVPFGAPKGHVGYQIRYDAEHVSEHTRIKFMTDGILLKEIQQDFLLRQYSILLLDEAHERNVNTDILIGLLSRIAPLRAQMSREEEEAYQLLSEEEKETAEKPIKPLKLVIMSATLRVEDFTQNQRLFPTPPPVLRVDARQYPVTVHFNKRTELDNYVDEAYKKVIKIHKKLPEGGVLVFLTGQREILQLCRKLSRAY----------------SVAARDKKAAA-----------------------------LXXXXXXXXXXXSSRVFRAQRR---QPNLDQRSGNKDDILREHDDIEEEADLEDTQVYGNEVDDEDAAYNLEEAEEASDKEDEDE-----------------------------------------------------------------------------------------ELDEDLAVPYLHVLPLYSLLPNDEQMKVFDTPPENHRLVVVATNVAETSLTIPGIKYVVDAGRTKERVFDLANGISSFEVQWISKASADQRAGRAGRTGPGHCYRLYSSAVYDTEFQKFSSPEILCQPIDDLVLQMKAMGIHNVSQFPFPTPPDRQAVKNALATLVNLGAVS-----PGNDE----------------SITGLGRSLVKFPVAARFAKMLLLAQKLNLVEYTIAIVAGLSGHSPFIHALDRREKEKGVDEEDGDGKKSEMEEMEKEWR-------EAEEMRKH-AQWIDQESDVLSLLRAAGAYAY--TGGSS----QFCKDNHLHEKTMQNMLKLRQQLTRIVNKLYAEQEGYASIELKPKMPPPDLETQVVLRQIVAAGFLDQVAKRVPAGTITEGTKIERNCAYIAATGNVKEPVYIHPHSSVFTPNPSKLPQFVVYQHIMRTTR----AYMKMVTAIEPEWLAGIGKNTPLCKYAPPLAEPAPFY-HPDLDEVQCYAKAQYGIHQWSLPAMRIVYPDRDVSDSKDGLGGKYRWFAKFLLDGQVITSL--LPFSNALKEPSHTLIRKKFDKKIQLLVAKLQQNRIASRRALVAKWMESDGKLFLKTELQSWIKDSHQVAFSQSWGSLVKTAV 1159
BLAST of mRNA_P-littoralis_Contig90.103.3 vs. uniprot
Match: A0A024UCN2_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UCN2_9STRA) HSP 1 Score: 731 bits (1888), Expect = 2.700e-229 Identity = 477/1161 (41.09%), Postives = 603/1161 (51.94%), Query Frame = 3
Query: 1833 VPVKRPAALQAARMQLPVCGMEQEITEAIHDNDTIILCGETGSGKSTQVPQFLYEAGYAAHGL----IGVTQPRRVAAVGTAERVAVELGTKCGKGGAVAYQIRYDASGVGEKTRVKFMTDGVLLQEITSDLLLRKYSVVLLDEAHERNLNTDVLLGMLSRSIPLRKQVAQEEQRSWDMLSTESQKQAKCPLRPLKLVIMSATLRVSDFTENTALFPVPPPVISATSRQHPVTVHFSKRTELFDYVGETFKKVCKIHQRLPEGGVLVFLTGKREIVHMCDKLRREFPPPR------AGGGRRKSGSGKTVGAEEVEASTDSADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGELVGGMAKGGEEKGKGARGADRETLLYREADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATRQALLPPVHVVPLYAMLTAEEQATVFRPPPEGHRLIVVATNVAETSITIPGIAYVVDCGRQKRRVVQRGSGISQFEVGWVSKASADQRAGRAGRTGPGHCYRLYSSALYTQTLEAFAPPEVLTRPLEDVMLQMKAMGIVDVSRFPFPTPPDAAGLRSAATLLANLGATAGRGNVPGGGSXXXXXXXXXXXXXXXXEITAVGKALALLPVGARYAKMLLLAVQGGLLAHAAALVAMLTEGDPFV----RPDSAVKKKDGGGVEGEPVEHGEEDRGXXXXXXXAEDVR-----RRRAQWLHPTSDALARLKAAGAYAYATSGGTAVGGGDFCHENFLHAPTMDRSLQLRRQLSRLVDLRFGTEPGWKGCDVAGTLRP----PSRKQTDALRQVLLAGLLDNVARRAPAGTVKAGSKLFRECAYLSCNEAVTEPLYIKSTSVLFSRDPLELPEWVVYQDIVRGEREGAAANMTCVTAVEAGWIPALAEGSPLLSFSEPLVSPPPSYDNENTHSVLCRVTPRYGVHAWELPPHLTELASAAPKSRPDTVFRWFGRLLLEGKVAGCLSELKGKDMLNDPPSLVTREMPTKKVAILVLELRQKGVCSLPALVMQWRRDPAFLKSAIDMWIKLGSKQGYLKAW 5246
V V R A+Q RMQLPVC EQEI EAI +N +ILCGETGSGK+TQVPQFLYEAGY G+ IGVTQPRRVAAV TA+RVA EL G+ GAV YQIRYD VG+ TR+KFMTDG+LL+EI D LL+KYS++LLDEAHERN+NTD+L+G+LSR P R Q+A EE+ +D LS Q A P++PLKLVIMSATLRV DFT+N LFP PPPVI +RQ+PVTVHF+K TEL DYV ++KV KIH+RLPEG +LVFLTG+REI+ + +LRR + A RR S + E + D AD ++ G + ++K D L P VHV+PLY+ML ++Q VF PP HRL++VATNVAETS+TIPG+ YVVD GR K RV SGISQF+V W+SKASADQRAGRAGRTGPGHCYRLYSSA++ + F+PP++L +P+EDV+LQMKAMGI ++ +FPFPTPP+A L +A T L +LGA N IT +GK LA PV R+AKMLLLA Q G L +A A+VA L+ PF+ R ++ +K+ + P + E+++ +R QW+ SD L+ L+AAGAYAY SGG+ FC EN LH M++ L+LR QL+ +V+ G A TLRP PS D LRQ++ AG +D VARR PAGT+ +GSK+ R CAY+SCN+ VTEPLYI S LF+ DP +LP +VVY ++VR R A M VTAVE W+ ++A +PL S+PL +PPP Y N V C V P YG H WELP L E K RWFGR LL+G V L + SL+ ++ K + +LV L + V S ALV QW+R+P FL + W++ K W
Sbjct: 336 VVVHRLDAIQLGRMQLPVCNAEQEIMEAIQNNSVVILCGETGSGKTTQVPQFLYEAGYGTDGMHPGMIGVTQPRRVAAVSTAQRVATELNVDFGQRGAVGYQIRYDNEHVGDATRIKFMTDGILLKEIQQDFLLKKYSIILLDEAHERNVNTDILIGLLSRVAPFRAQMAIEEREHFDSLSLADQASAPPPIQPLKLVIMSATLRVEDFTQNKTLFPTPPPVIKVEARQYPVTVHFNKHTELHDYVQAAYQKVAKIHRRLPEGAILVFLTGQREILQLVRQLRRTMGSSQRKKLVQASTHRRNSVQNEAWYIREHDDDDDEAD-----------------------------------LDDADVYGDEEEVDDDKSXXXXXXXXXXXXANAIDEADD-----------------------------------------------------------------------------------------------------------------------------------LFPFVHVLPLYSMLANDDQMKVFEAPPPKHRLVIVATNVAETSLTIPGVRYVVDAGRTKERVFDLKSGISQFQVQWISKASADQRAGRAGRTGPGHCYRLYSSAVFDNEFKTFSPPQILCQPIEDVVLQMKAMGIENILQFPFPTPPEAIALHAAVTTLLHLGALDRTTN----------------------SITGLGKTLAGFPVAPRFAKMLLLAQQVGCLEYAIAVVASLSGQSPFILERERKETQKFQKEDATNDTLPTDASTAADTETRIDAWTEELQEAEAMKRHTQWIDNDSDVLSMLRAAGAYAY--SGGST----SFCAENHLHEKIMEQMLKLRGQLTTIVNKLVGA--------TALTLRPNMPPPSDDDQDLLRQIIAAGFVDQVARRVPAGTITSGSKIERNCAYMSCNDVVTEPLYIHPHSHLFTTDPSKLPPYVVYTNVVRTSR----AYMKTVTAVEPDWLFSVAANTPLCETSDPLAAPPPKY-NAALDRVECYVKPMYGSHKWELPAALVEYPDGPVK------LRWFGRFLLDGLVVPSLKPFLANKLREPSLSLIKKKFDVK-IQVLVSALERAKVSSRRALVAQWQRNPKFLHDELLSWVQDNHKAALKAQW 1282 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig90.103.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig90.103.3 >prot_P-littoralis_Contig90.103.3 ID=prot_P-littoralis_Contig90.103.3|Name=mRNA_P-littoralis_Contig90.103.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1731bp MARSRAKGRSAPSKGGKGPTQHSGRGAGSAPATTADTAVDGPSLLSPELMback to top mRNA from alignment at P-littoralis_Contig90:426169..440686- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig90.103.3 ID=mRNA_P-littoralis_Contig90.103.3|Name=mRNA_P-littoralis_Contig90.103.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=14518bp|location=Sequence derived from alignment at P-littoralis_Contig90:426169..440686- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig90:426169..440686- >mRNA_P-littoralis_Contig90.103.3 ID=mRNA_P-littoralis_Contig90.103.3|Name=mRNA_P-littoralis_Contig90.103.3|organism=Pylaiella littoralis U1_48|type=CDS|length=5193bp|location=Sequence derived from alignment at P-littoralis_Contig90:426169..440686- (Pylaiella littoralis U1_48)back to top |