prot_P-littoralis_Contig90.74.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig90.74.1
Unique Nameprot_P-littoralis_Contig90.74.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length568
Homology
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BLAST of mRNA_P-littoralis_Contig90.74.1 vs. uniprot
Match: D8LHG7_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHG7_ECTSI)

HSP 1 Score: 550 bits (1418), Expect = 8.000e-189
Identity = 346/576 (60.07%), Postives = 381/576 (66.15%), Query Frame = 0 
Query:    7 SLASSRIEWSASRSLKKAKSTALLTLRIGEYVVKTQVVVQPVVKKVVREWKSFNAFRDRHKDQRRSKTLDWLEDRVQTMRREEGIKRQRQHTLRRKMMRAQAKRERAEKRTKNLLNETRTEFQRMADLSLATSLEKERVRDYFLDNNDGWQMQALTRHVEEDEDRQRQQREDAVADKVREGDVLRQAAADEYLAEYDRGEVITQATLRIMRRSGIIAGVNAPPPEIEEPPLETDNFLLLRLKAVPPPHVGGGIEGVEKETEA-------------GTGARNNHDGSGGGSTVLPSLQAAGAGNEHHRQRIVNRLKIPRTATTAPSSSLLPGXXXXXXXXXXXXXXXAATVTALGGAVKTGSAPAVTP--AERGSSSRGGAGAGAGTRRRAGGLNRGKKRSSGAFEVDLLRFRGVEEIRGWKIGAPGGESLAADFTCGACPRLSILRLSWCSLGDRGTRAIVRSLCGGGGASAAGRTLQELDLRGNAVTAVGLRMLGGALALGGLPALRALDLGCNSLRDEGGRVVAHRVLAGEGTWPFLARLDLSRNGMGDGGVEAVYKAVCAPGVRLAADVEMIS 567
            S+ SS    SASR  KK K +A+LTLRIGEYVVKTQVV  PVV KVV+EWK FN FRDRH+ +RR+KTLDW EDRV TMRREE   RQR+   RR   RAQ              NETR EF+  ADL L TSLEKERVRDYFLDNNDGWQMQALTRHV+EDE            +KVR+GD  RQAAADEYLAEYDRGEVITQATLRIMRRSGI+AGVNAPP EI+E PLETD +LLLRLK                                 G G      G+GG  +  P+  AAG  N HH QR   +  +        S S+ P                   V ++      G+ P   P  AE    SRGG   G G R  AG  NRGKKRSS AFEVDLLRFRGVEE+RGWK+GAPGGESLA+D   GACPRLS+LRL WC LGDRG  AIVR+LCGGGGASAAGRTL+ LDLRGNAVTAVGLR+L G LA GGLPALRALDLG NSLRDEGG+ VAHR+LAG GTW  L RLDLS NGMG+GGVEAV+KAV APGV LA DVE IS
Sbjct:    2 SIGSSETAKSASRGFKKVKKSAMLTLRIGEYVVKTQVVA-PVVTKVVQEWKGFNRFRDRHQAERRNKTLDWFEDRVATMRREEENMRQRKQEQRRTKRRAQLXXXXXXXXXXXXXNETRAEFKHQADLRLTTSLEKERVRDYFLDNNDGWQMQALTRHVQEDEXXXXXXXXXXXXEKVRQGDANRQAAADEYLAEYDRGEVITQATLRIMRRSGIVAGVNAPPAEIKEEPLETDTYLLLRLKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLGIGGIRQSSGTGG--SKPPAFPAAGERNGHH-QRAGRQTAVTEMPGKNSSRSVQP-------------------VQSVEATPNNGAGPTAGPVAAEGRKPSRGGGIRGGGGR--AGNHNRGKKRSSQAFEVDLLRFRGVEEMRGWKLGAPGGESLASDLASGACPRLSVLRLGWCLLGDRGACAIVRALCGGGGASAAGRTLRTLDLRGNAVTAVGLRVLAGPLAFGGLPALRALDLGSNSLRDEGGKAVAHRLLAGAGTWRRLTRLDLSGNGMGNGGVEAVFKAVTAPGVTLAPDVEFIS 552
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig90.74.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LHG7_ECTSI8.000e-18960.07Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 158..178
NoneNo IPR availableCOILSCoilCoilcoord: 96..123
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 430..457
e-value: 72.0
score: 4.0
coord: 495..522
e-value: 0.65
score: 18.5
coord: 527..554
e-value: 57.0
score: 4.8
coord: 465..492
e-value: 0.69
score: 18.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 311..345
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 272..290
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 255..388
NoneNo IPR availablePANTHERPTHR24107YNEIN REGULATORY COMPLEX SUBUNIT 5coord: 292..548
NoneNo IPR availablePANTHERPTHR24107:SF2MAP-HOMOLOGOUS PROTEIN 1coord: 292..548
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 418..553
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 430..451
e-value: 0.76
score: 10.0
coord: 530..547
e-value: 0.044
score: 13.9
coord: 466..486
e-value: 0.024
score: 14.7
coord: 498..514
e-value: 0.12
score: 12.6
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 408..557
e-value: 3.2E-20
score: 74.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig90contigP-littoralis_Contig90:331040..335103 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig90.74.1mRNA_P-littoralis_Contig90.74.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig90 331040..335103 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig90.74.1 ID=prot_P-littoralis_Contig90.74.1|Name=mRNA_P-littoralis_Contig90.74.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=568bp
MYKVDSSLASSRIEWSASRSLKKAKSTALLTLRIGEYVVKTQVVVQPVVK
KVVREWKSFNAFRDRHKDQRRSKTLDWLEDRVQTMRREEGIKRQRQHTLR
RKMMRAQAKRERAEKRTKNLLNETRTEFQRMADLSLATSLEKERVRDYFL
DNNDGWQMQALTRHVEEDEDRQRQQREDAVADKVREGDVLRQAAADEYLA
EYDRGEVITQATLRIMRRSGIIAGVNAPPPEIEEPPLETDNFLLLRLKAV
PPPHVGGGIEGVEKETEAGTGARNNHDGSGGGSTVLPSLQAAGAGNEHHR
QRIVNRLKIPRTATTAPSSSLLPGPPQGSSKAAARNSNNAATVTALGGAV
KTGSAPAVTPAERGSSSRGGAGAGAGTRRRAGGLNRGKKRSSGAFEVDLL
RFRGVEEIRGWKIGAPGGESLAADFTCGACPRLSILRLSWCSLGDRGTRA
IVRSLCGGGGASAAGRTLQELDLRGNAVTAVGLRMLGGALALGGLPALRA
LDLGCNSLRDEGGRVVAHRVLAGEGTWPFLARLDLSRNGMGDGGVEAVYK
AVCAPGVRLAADVEMISV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf