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Homology
BLAST of mRNA_P-littoralis_Contig90.69.1 vs. uniprot
Match: D8LHG4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHG4_ECTSI) HSP 1 Score: 1114 bits (2882), Expect = 0.000e+0 Identity = 655/928 (70.58%), Postives = 725/928 (78.12%), Query Frame = 1
Query: 1 MSDQPQYYRITNSLESLSVRIRLRKIFGRSINTKTNNVKTIGGVRSERENDANDD--KIPGSFVPGDEADVRVKWQEKIFGPEDIVTFSTAQRSGGEKQQQYRAAGPPNNPLSRLERDYGGQLEDLRRDGIDHLASLSEVMLFTHTDKDGYVPPCDKAGGXXXGLTTGDGGPFSYLGEAVTNMPRKAANSSLETXXXXXXXXXXXXXX------ARAGVSETAAVIQTHLAREDKFKVMYVMAAVDIDVREATKVAKARAAALGG-SRWKRGEGGGGVHAHEQVVCTIKAHQNGTLEIAPGFSAEEPESGDEGAFLTDHTVKVMDKEGARLTTYRFTSPSGGVFSYTVENDSEPGGGVEEMEVWEAEEASRDMWKKASLQQAAGTQLLGAPATGGAVALHAFMEIVSASGFTGASRLYTEYALCLPGHWVLAAEQGXXXXXXXEANSAGEDHGGVGG---------EPGGFGEIE-EFAAGGTTQVASQAYPLAVPRRSLQSNTVTNNIINESNASSSLGYGXXXXXXXXXXTRSVTNRYGDATMPAGFRAPPKMVVSGAGVRLGSAVLLCLLGLLGSLGETPLFWVVLGGXXXXXXXXXXXXXXXXXXXXERGEGSSPIAHFGFPAEFHLVNEEEGETAGIGERPQVLLAVSSLDSLARHRVEGYGYVSFPRQPGAHELLIRTWRPICSMRTHLQDFFVGGAHRLHDPRYASKPVTFKGSFLNRFGFRTETSGILRVRLHLAEQGRNRDLHGGFGGAGDGPSIDLAGTRTVKEILRVVNAKRMGATVSRRFSATMDPASPAAAAAVADPTXXXXXXXXXXXXXXLATARGTGAVGKRQTANDGDNDRGG--SGGALVDEHSAPMPLLGSRNPFESTVVPGEGGK-RGKIEAAADLLARVKGQLERSEQRTKRSPDERQGISDIAPPR 2718
MS+QPQYYRIT+SLESL+VRIRLRKIFGRSINT T +G VR ++ D DD PGSF+PGDEAD+RVKWQEK+FGPED+VT S+ QR GG+ QQQ RA GPP+N LSRLERDY G LEDLRRDG+D L SLSEVMLFT+TDKDG+VPP DKAG GLTTGDGGPFS L EAVT+MPR A+S LET XXXX +RAGVS+TAAVIQ HLAREDK+KVMY+MAAVD+DVREATKVAK+RAAA GG SRW++GE G G+HAHEQVVC+IKAHQNGTLEIAPGFSAEEPESGDEGAFLTDHT+KVMDKEGARLTTYRFTSPSGGVFSYTVENDSEPGGGVEE+E WEAEEASRD+WKKAS QQ AGTQL+GAP GGAVALH FMEIVSASGF G RLYTEYALCLP HW +A E+G A HG G E GG G+ +FAAGGTTQVASQAYPLAVP RS++S T T +S+ S LG+G + S N YG++ MPA F+APPK+V+SGA +R SA+LLC LGLL SLGE+PLFWVVLGGXXXXXXXXXXXXXXXX EG SP+AHFGFPAEFHL+NEEEGE AGIGERPQ+LLAVSSLD LARHRVEGYGYVSFPRQPGAHEL IRTWRP+CS+RTHLQDFFVGGAHRLHDPRYASKP +F+G+FL+RFGFRTETSG LRVRLHLAEQGR RDL GG G GP+IDLAGTRTVKEILRVVNAKRMG + RRFSAT+DPASP+AAAA P XXXXXXXXXX +TA+ VG G GG GG DE +A +PLLGSRNPFE T+ GGK GKIEAAA LLA V+GQLERSEQRTK S ER G D+APPR
Sbjct: 1 MSNQPQYYRITDSLESLNVRIRLRKIFGRSINTNTG---AVGKVRPGKKGDHGDDVDNAPGSFLPGDEADIRVKWQEKVFGPEDVVTLSSGQRRGGKSQQQ-RAVGPPDNALSRLERDYAGHLEDLRRDGVDPLESLSEVMLFTYTDKDGFVPPSDKAGAAEGGLTTGDGGPFSCLEEAVTSMPRTVASSLLETAKTAAGGGRGXXXXXASGRNSRAGVSDTAAVIQAHLAREDKYKVMYIMAAVDVDVREATKVAKSRAAAPGGGSRWRQGEDGVGIHAHEQVVCSIKAHQNGTLEIAPGFSAEEPESGDEGAFLTDHTLKVMDKEGARLTTYRFTSPSGGVFSYTVENDSEPGGGVEEIEAWEAEEASRDLWKKASRQQNAGTQLVGAPVAGGAVALHVFMEIVSASGFAGVDRLYTEYALCLPRHWTMADEEGSRG-----AGXXXXXHGSGRGDRGDHTFAWENGGNGDGSGDFAAGGTTQVASQAYPLAVPHRSVRSATTTTT--RKSDTRSGLGHGTSSASVTTLSSSSTINTYGNSAMPAAFQAPPKIVMSGAALRATSAILLCFLGLLASLGESPLFWVVLGGXXXXXXXXXXXXXXXX-------EGGSPVAHFGFPAEFHLINEEEGEMAGIGERPQILLAVSSLDGLARHRVEGYGYVSFPRQPGAHELHIRTWRPVCSIRTHLQDFFVGGAHRLHDPRYASKPGSFRGTFLSRFGFRTETSGTLRVRLHLAEQGRVRDLRAESGGEGGGPTIDLAGTRTVKEILRVVNAKRMGVEIGRRFSATVDPASPSAAAAPTTPAAGXXXXXXXXXX--XSTAKPREGVG-------GGRGMGGVSGGGVSHDEDNATIPLLGSRNPFERTL----GGKGTGKIEAAAHLLATVRGQLERSEQRTKGSLVERGGAGDMAPPR 897
BLAST of mRNA_P-littoralis_Contig90.69.1 vs. uniprot
Match: A0A7S2BNE2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BNE2_9STRA) HSP 1 Score: 166 bits (420), Expect = 1.500e-39 Identity = 179/619 (28.92%), Postives = 261/619 (42.16%), Query Frame = 1
Query: 412 VMLFTHTDKDGYVPPCDKAGGXXXGLTTGDGGPFSYLGEAVTNMPRKAANSSLETXXXXXXXXXXXXXXARAGVSETAAVIQTHLAREDKFKVMYVMAAVDIDVREATKVAKARAAALGGSRWKRGEGGGGVHAHEQVVCTIKAHQNGTLEIAPGFSAEEPESGDEGAFLTDHTVKVMDKEGARLTTY--RFTSPS----GGVFSYTVEN-DSEPGGGVEEMEVWEAEEASRDMWKKASLQQAAGTQLLGAPATGGAVALHA-------FM-----EIVSASGFTGASRLYTEYALCLPGHWVLAAEQGXXXXXXXEANSAGEDHGGVGGEPGGFGEIEEFAAGGTTQVASQAYPLAVPRRSLQSNTVTNNII-----NESNASSSLGYGXXXXXXXXXXTRSVTNRYGDATMPAGFRAPPKMVVSGAGVRLGSAVLLCLLGLLGSLGETPLFWVVLGGXXXXXXXXXXXXXXXXXXXXERGEGSSPIAHFGFPAEFHLVNEEEGETAGIGERPQVLLAVSSLDSLARHRVEGYGYVSFPRQPGAHELLIRTWRPICSMRTHLQDFFVGGAHRLHDPRYASKPVTF-------KGSFLNRFGFRTETSGILRVRLHLAE 2175
V LFT+ D D + P +K + G L EA+ N+ KA+ +S A+ + HL R+ +KVMY+MAAV +D+ +A + A R E V+C IK H+ G+LE+ PGFS EEPES D+G F + ++K++ + GARLTT+ R +SP GV+ YT+EN + P ++E AEE +D QA + G P + +H FM E+VSA F A L+ EY + LP W G + NS GE + G+TQVAS + L+S + ++ +AS SL Y + + A++ A + G G+ L +A++L F+V+ G + E P+AHFG P F++++ + P VL VSS+ S RHR++GYGY P G+ E I TWRP + L DFFVGGA+RL D RY + P FL++FGF T++SG +RVR+H E
Sbjct: 36 VHLFTYVDTDSFSPSEEKVPRTNSMVEPGP------LAEAMGNINNKAS------------------------LSAGASSVHAHLTRDGMYKVMYLMAAVPVDLSKAEAAIDKKDADRLRDR---------NIVQEHVLCAIKFHKKGSLEVTPGFSEEEPESDDDGPFRSAGSLKIIAERGARLTTFTLRVSSPIDGSVAGVYQYTIENVNGMPD--ATKLEQLVAEERVKDA-------QAVALRKGGIPES-----IHEDLPKDVNFMMRMRIELVSAISFD-AEWLFCEYQVLLPLGWRPDDPSGW------KRNSQGE-----------------WTLAGSTQVASC--------KELRSTMGKDPMLAYMQQRTDSASGSLPY-----------VAILCGAWAIASIIA------MLFGYGYGIWLAAAIVL--------------FFVIFG---------------ITPTAGDVTESIQPVAHFGLPIRFNVLSSHSDSGELMMATPLVLFQVSSVHSFERHRIQGYGYARLPVAAGSKEAEISTWRPAGDFSSQLADFFVGGANRLSDLRYIAHPPASGQQGHASSTRFLSKFGFLTQSSGKVRVRVHAME 523
BLAST of mRNA_P-littoralis_Contig90.69.1 vs. uniprot
Match: A0A7S1XTY5_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XTY5_9STRA) HSP 1 Score: 147 bits (372), Expect = 9.880e-33 Identity = 192/805 (23.85%), Postives = 313/805 (38.88%), Query Frame = 1
Query: 1 MSDQPQYYRITNSLESLSVRIRLRKIFGRSINTKTNNVKTIGGVRSERENDANDDKIPGSFVPGDEADVRVKWQEKIFGPEDIVTFSTAQRSGGEKQQQYRAAGPPNNPLSRLERDY----------------GGQLED-----LRRDGIDHLASLSEVMLFTHTDKDGYVPPCDKAGGXXXGLTTGDGGPFSYLGEAVTNMPRKAANSSLETXXXXXXXXXXXXXXARAGVSETAAVIQTHLAREDKFKVMYVMAAVDIDVREATKVAKARAAA--------------------LGGSRWKRGEGGGGVHAHEQVVCTIKAHQNGTLEIAPGFSAEEPESGDEGA-FLTDHTVKVMDKEGARLTTYRFTSPSGGVFSYTVENDSEPGGGVEEMEVWEAEEASRDMWKKASLQQAAGTQLLGAPATGGA--VALHAFMEIVSASGF--TGASRLYTEYALCLPGHWVLAAEQGXXXXXXXEANSAGEDHGGVGGEPGGFGEIEEFAAGGTTQVASQAYPLAVPRRSLQSNTVTNNIINESN----ASSSLGYGXXXXXXXXXXTRSVTNRYGDATMPAGFRAPPKMVVSGAGVRLGSAVLLCLLGLLGSLGETP-LFWVVLGGXXXXXXXXXXXXXXXXXXXXERGEGSSPIAHFGFPAEFHLVNEEEG-------ETAGIGERPQVLLAVSSLDSLARHRVEGYGYVSFPRQPGAHELLIRTWRPICSMRTHLQDFFVGGAHRLHDPRYASKPVTF----------KGSFLN-----------RFGFRTETSGILRVRLHLAEQ 2178
M + Y + +E+L V++ LR+IF ++ + G + + + + +++ +V WQEK FGP +++ +Y A P+NP +R E+ Y G ED R G + ML+T+TD D +V P TT S + A+T + ++ SS A + +Q L R++ +KVMY+MAAV++D +EA ++ K AA L G + + AH +V+C IK + +G +E+ PGFS + ES DEG F+ D +K ++G +LTT+RF + G +F Y VEN +E E + + EA E + + S QQA T+ + P +AL +EIV A F T LY EY P HW L A+ A + E+ +A V + A S + VT+ ++ + A G+G + N + G+ A++L + L+ L E +FW+V R + ++ + HFG F + E + A P++ VS L L H V GY Y P+Q G + + + TW+P ++ + ++DFF+GGA RL +A + V+ G+ L+ R G TE++G L V++H+AE+
Sbjct: 1 MEEAAHRYHTRDPIENLRVKVSLRQIFEPE-HSDLPGERLKAGSKKKSKRPTSRNEVGQLYVK------TFHWQEKKFGPHELI--------------KYNAPNKPHNP-TRAEQTYYSMFRRRNWQAKHSGEGTSEEDEALSSARLHGDVTAPDFRQAMLYTYTDGDSFVSP----DAINKRSTTSISIHKSNISYAMTYLNQRTKGSS---------------ENASDTIPAQVQKLQAALDRQEPYKVMYIMAAVEVDPKEAEELLKKERAAKTTRPIIRRSTIQNLPGAGKLAGPSSEERRPYKALKAHHEVLCQIKLYTSGKMEVQPGFSEAQAESDDEGGGFVDDVALKTQLEQGPKLTTFRFQTAEGRIFEYAVENVNEVDNDDELINI-EAHEREIEKKQTRSRQQAR-TRNITHPVVDEPRPLALQVQLEIVGADSFAQTNGRSLYVEYETVTPNHWRLEADVASYVKDTARARTRMRSQ-----------SAEDASA---DNVNAPLLSRADDTSSDEIVGVTHRVLPGTGYCFGAGFEQGHGLSFDKAISLSEANAGNMHMKQARGIGY-----------------AIILIVTMLMAILHEARNVFWLVYAFELIIALYMVDHMRSYSELDVSRIKDAA-VYHFGHLLSFSMRGSENLRLKPGMIDVALPLHSPKIYFTVSQLSDLELHTVAGYAYCDVPQQAGTYYMKLNTWKPTDTLYSRMKDFFIGGADRLAHVSFAGRHVSGAAQATGGKLRSGARLSGGDPKDLPHYSRLGMVTESAGNLYVKMHVAER 730
BLAST of mRNA_P-littoralis_Contig90.69.1 vs. uniprot
Match: UPI000719CB83 (Meckel syndrome type 1 protein-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719CB83) HSP 1 Score: 119 bits (297), Expect = 2.930e-24 Identity = 60/139 (43.17%), Postives = 86/139 (61.87%), Query Frame = 1
Query: 1789 GSSPIAHFGFPAEFHLVN-----EEEGETAGIGERPQVLLAVSSLDSLARHRVEGYGYVSFPRQPGAHELLIRTWRPIC-SMRTHLQDFFVGGAHRLHDPRYASKPVTFKGSFLNRFGFRTETSGILRVRLHLAEQGRN 2187
G +AHF FP EF L E+E T + PQ+ + V SLDS R+R EGYGY++ P PG + TWRP+ S+R L+ FFVGG+ L DP Y S P TF+G+ L++FGF+TE++G + +R++ +Q R+
Sbjct: 330 GRDNVAHFSFPFEFELFYKKETIEDEKGTDEMMRWPQLYIEVLSLDSWHRYRTEGYGYITLPTSPGCRMETLNTWRPVGHSIRDELRRFFVGGSPELEDPTYVSVPSTFEGAHLSKFGFKTESTGSVTIRINTIQQSRS 468
BLAST of mRNA_P-littoralis_Contig90.69.1 vs. uniprot
Match: A0A2G8L0N2_STIJA (Meckel syndrome type 1 protein n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8L0N2_STIJA) HSP 1 Score: 117 bits (293), Expect = 1.300e-23 Identity = 58/132 (43.94%), Postives = 84/132 (63.64%), Query Frame = 1
Query: 1801 IAHFGFPAE---FHLVNEEEGETAGIGERPQVLLAVSSLDSLARHRVEGYGYVSFPRQPGAHELLIRTWRPIC-SMRTHLQDFFVGGAHRLHDPRYASKPVTFKGSFLNRFGFRTETSGILRVRLHLAEQGR 2184
+A+ P E F+ +E E + + PQV + V S+DS R+R EGYGY++ P PG H L I+TWRP+ S +L+ FF+GG+ L DP Y S P+T G L+RFGFRTET+G++ ++LH+ +Q R
Sbjct: 308 VAYLSHPFEVEMFYKPDEVEENEERLPQWPQVFVEVLSIDSWQRYRTEGYGYITIPSTPGTHHLDIQTWRPLGRSSYENLERFFIGGSPELEDPTYVSVPITHDGPVLSRFGFRTETTGMVSLKLHVMQQSR 439
BLAST of mRNA_P-littoralis_Contig90.69.1 vs. uniprot
Match: S4RH51_PETMA (MKS transition zone complex subunit 1 n=1 Tax=Petromyzon marinus TaxID=7757 RepID=S4RH51_PETMA) HSP 1 Score: 107 bits (267), Expect = 5.460e-22 Identity = 51/137 (37.23%), Postives = 82/137 (59.85%), Query Frame = 1
Query: 1780 RGEGSSPIAHFGFPAEFHLVNEEEGET-AGIGERPQVLLAVSSLDSLARHRVEGYGYVSFPRQPGAHELLIRTWRPIC-SMRTHLQDFFVGGAHRLHDPRYASKPVTFKGSFLNRFGFRTETSGILRVRLHLAEQGR 2184
+ + + +AHF FP F ++E E+ + P + + V S+D R+R EGY Y+ P PG E++ + WRP+ + + L+ FF+GG + L DP Y + P TF+G L+R+GF+TET+G + V+LH +Q R
Sbjct: 76 KSKNKNNVAHFSFPFSFEAFFKKEDESDVSLPHWPTLYMEVVSVDFWHRYRTEGYSYLLIPSMPGYSEVVCQAWRPVQPGLTSELRRFFIGGFNELEDPTYVAIPSTFQGDKLSRYGFKTETTGSITVKLHCIQQSR 212
BLAST of mRNA_P-littoralis_Contig90.69.1 vs. uniprot
Match: A0A6P4YCH1_BRABE (Meckel syndrome type 1 protein-like n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4YCH1_BRABE) HSP 1 Score: 111 bits (277), Expect = 1.040e-21 Identity = 53/132 (40.15%), Postives = 80/132 (60.61%), Query Frame = 1
Query: 1786 EGSSPIAHFGFPAEFHLVNEEEGETAGIGERPQVLLAVSSLDSLARHRVEGYGYVSFPRQPGAHELLIRTWRPIC-SMRTHLQDFFVGGAHRLHDPRYASKPVTFKGSFLNRFGFRTETSGILRVRLHLAEQ 2178
EG +A+F +P E+ + E E + + P + L V S+DS R+R EGYGY P PG H + TWRP+ S+ ++ FF+GG+ L DP Y + P TF G L++FGFRTE+SG ++++L+ +Q
Sbjct: 358 EGKDNVAYFSYPFEYEVFFRNETED-DMPQWPLLFLQVLSVDSWQRYRTEGYGYCGVPSAPGVHHKTVHTWRPVGNSLVDPMRRFFIGGSPELEDPTYTAVPTTFDGQRLSKFGFRTESSGSIQIKLYCVQQ 488
BLAST of mRNA_P-littoralis_Contig90.69.1 vs. uniprot
Match: UPI0003F0D2F6 (Meckel syndrome type 1 protein homolog n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0D2F6) HSP 1 Score: 110 bits (275), Expect = 1.710e-21 Identity = 55/134 (41.04%), Postives = 83/134 (61.94%), Query Frame = 1
Query: 1792 SSPIAHFGFPAEFHLVNEEEGETAG----IGERPQVLLAVSSLDSLARHRVEGYGYVSFPRQPGAHELLIRTWRPIC-SMRTHLQDFFVGGAHRLHDPRYASKPVTFKGSFLNRFGFRTETSGILRVRLHLAEQ 2178
S +A+F P EF L+ + T + PQ+ + V SLDS R+R EGYGY+ FP G HEL I+TWRP S+ ++ FF+GG+ L DP Y + P T +G L++FGF+TET+G +++R+++ +Q
Sbjct: 349 SENVAYFCCPFEFDLLYHNDDITEDDKYVMPHWPQLFVEVLSLDSWQRYRTEGYGYIDFPNTSGTHELEIKTWRPQGNSLIDEMRRFFIGGSPELEDPTYTAVPTTHEGEILSKFGFKTETTGSVKLRINILQQ 482
BLAST of mRNA_P-littoralis_Contig90.69.1 vs. uniprot
Match: A0A2G8K8Y6_STIJA (Putative Meckel syndrome type 1 protein isoform X3 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8K8Y6_STIJA) HSP 1 Score: 110 bits (274), Expect = 2.330e-21 Identity = 57/137 (41.61%), Postives = 84/137 (61.31%), Query Frame = 1
Query: 1801 IAHFGFPAE---FHLVNEEEGETAGIGERPQVLLAVSSLDSLARHRVEGYGYVSFPRQPG-----AHELLIRTWRPIC-SMRTHLQDFFVGGAHRLHDPRYASKPVTFKGSFLNRFGFRTETSGILRVRLHLAEQGR 2184
+A+ P E F+ +E E + + PQ+ + V S+DS R+R EGYGY++ P PG H L I+TWRP+ S +L+ FF+GG+ L DP Y S P+T G L+RFGFRTET+G++ ++LH+ +Q R
Sbjct: 350 VAYLSHPFEVEMFYKPDEIEENEERLPQWPQIFVEVLSIDSWQRYRTEGYGYITIPSTPGKYIRCTHHLDIQTWRPLGRSSYENLRRFFIGGSPELEDPTYVSVPITHDGPVLSRFGFRTETTGMVSLKLHVMQQSR 486
BLAST of mRNA_P-littoralis_Contig90.69.1 vs. uniprot
Match: UPI0014040EFB (Meckel syndrome type 1 protein n=1 Tax=Petromyzon marinus TaxID=7757 RepID=UPI0014040EFB) HSP 1 Score: 107 bits (267), Expect = 2.020e-20 Identity = 51/137 (37.23%), Postives = 82/137 (59.85%), Query Frame = 1
Query: 1780 RGEGSSPIAHFGFPAEFHLVNEEEGET-AGIGERPQVLLAVSSLDSLARHRVEGYGYVSFPRQPGAHELLIRTWRPIC-SMRTHLQDFFVGGAHRLHDPRYASKPVTFKGSFLNRFGFRTETSGILRVRLHLAEQGR 2184
+ + + +AHF FP F ++E E+ + P + + V S+D R+R EGY Y+ P PG E++ + WRP+ + + L+ FF+GG + L DP Y + P TF+G L+R+GF+TET+G + V+LH +Q R
Sbjct: 362 KSKNKNNVAHFSFPFSFEAFFKKEDESDVSLPHWPTLYMEVVSVDFWHRYRTEGYSYLLIPSMPGYSEVVCQAWRPVQPGLTSELRRFFIGGFNELEDPTYVAIPSTFQGDKLSRYGFKTETTGSITVKLHCIQQSR 498
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D8LHG4 |
| Preferred name | MKS1 |
| PFAMs | B9-C2 |
| Model size | 2721 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K03030,ko:K19332 |
| KEGG Pathway | ko03050,ko05169,map03050,map05169 |
| KEGG Module | M00341 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000226,GO:0001501,GO:0001578,GO:0001763,GO:0001838,GO:0001841,GO:0001843,GO:0001894,GO:0002009,GO:0003007,GO:0003156,GO:0003205,GO:0003206,GO:0003264,GO:0003266,GO:0003271,GO:0003279,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005814,GO:0005815,GO:0005829,GO:0005856,GO:0005929,GO:0006996,GO:0007010,GO:0007017,GO:0007154,GO:0007165,GO:0007166,GO:0007224,GO:0007275,GO:0007368,GO:0007389,GO:0007399,GO:0007423,GO:0007507,GO:0007568,GO:0007610,GO:0008150,GO:0008340,GO:0008589,GO:0009653,GO:0009790,GO:0009792,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009966,GO:0009987,GO:0010259,GO:0010646,GO:0010669,GO:0014020,GO:0015630,GO:0016020,GO:0016043,GO:0016331,GO:0021915,GO:0022008,GO:0022406,GO:0022603,GO:0022607,GO:0023051,GO:0023052,GO:0030030,GO:0030031,GO:0030111,GO:0030154,GO:0030182,GO:0030326,GO:0030537,GO:0031175,GO:0032501,GO:0032502,GO:0032991,GO:0035082,GO:0035107,GO:0035108,GO:0035113,GO:0035148,GO:0035177,GO:0035239,GO:0035295,GO:0035869,GO:0036038,GO:0036064,GO:0042127,GO:0042490,GO:0042592,GO:0042733,GO:0042995,GO:0043009,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043583,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044450,GO:0044458,GO:0044463,GO:0044464,GO:0044782,GO:0045995,GO:0048468,GO:0048513,GO:0048568,GO:0048583,GO:0048598,GO:0048646,GO:0048666,GO:0048699,GO:0048706,GO:0048729,GO:0048731,GO:0048736,GO:0048754,GO:0048839,GO:0048856,GO:0048869,GO:0048871,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051179,GO:0051239,GO:0051640,GO:0051641,GO:0051716,GO:0051960,GO:0060113,GO:0060119,GO:0060122,GO:0060173,GO:0060249,GO:0060271,GO:0060322,GO:0060411,GO:0060429,GO:0060562,GO:0060606,GO:0060756,GO:0060828,GO:0061008,GO:0061009,GO:0061138,GO:0061311,GO:0061822,GO:0065007,GO:0065008,GO:0070925,GO:0071840,GO:0072175,GO:0072359,GO:0090175,GO:0097711,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:0140056,GO:1901620,GO:1905330,GO:1905349,GO:1905515,GO:1990403,GO:2000026,GO:2000027,GO:2000050,GO:2000095,GO:2000136,GO:2000826 |
| Exons | 13 |
| Evalue | 0.0 |
| EggNOG OGs | KOG4446@1|root,KOG4446@2759|Eukaryota |
| Ec32 ortholog description | B9 domain |
| Ec32 ortholog | Ec-11_004170.1 |
| Description | smoothened signaling pathway involved in regulation of secondary heart field cardioblast proliferation |
| Cds size | 2721 |
| COG category | S |
| BRITE | ko00000,ko00001,ko00002,ko01002,ko03036,ko03051,ko04121 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791804.525234-CDS-P-littoralis_Contig90:292989..293532 | 1680791804.525234-CDS-P-littoralis_Contig90:292989..293532 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig90 292990..293532 - |
| 1680791804.5493553-CDS-P-littoralis_Contig90:294288..294435 | 1680791804.5493553-CDS-P-littoralis_Contig90:294288..294435 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig90 294289..294435 - |
| 1680791804.5667698-CDS-P-littoralis_Contig90:294757..294904 | 1680791804.5667698-CDS-P-littoralis_Contig90:294757..294904 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig90 294758..294904 - |
| 1680791804.577637-CDS-P-littoralis_Contig90:295226..295712 | 1680791804.577637-CDS-P-littoralis_Contig90:295226..295712 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig90 295227..295712 - |
| 1680791804.5883467-CDS-P-littoralis_Contig90:295942..296155 | 1680791804.5883467-CDS-P-littoralis_Contig90:295942..296155 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig90 295943..296155 - |
| 1680791804.6033385-CDS-P-littoralis_Contig90:296500..296569 | 1680791804.6033385-CDS-P-littoralis_Contig90:296500..296569 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig90 296501..296569 - |
| 1680791804.6133206-CDS-P-littoralis_Contig90:298368..298545 | 1680791804.6133206-CDS-P-littoralis_Contig90:298368..298545 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig90 298369..298545 - |
| 1680791804.6258368-CDS-P-littoralis_Contig90:299235..299300 | 1680791804.6258368-CDS-P-littoralis_Contig90:299235..299300 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig90 299236..299300 - |
| 1680791804.638671-CDS-P-littoralis_Contig90:299630..299817 | 1680791804.638671-CDS-P-littoralis_Contig90:299630..299817 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig90 299631..299817 - |
| 1680791804.6520944-CDS-P-littoralis_Contig90:300147..300423 | 1680791804.6520944-CDS-P-littoralis_Contig90:300147..300423 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig90 300148..300423 - |
| 1680791804.666232-CDS-P-littoralis_Contig90:300983..301052 | 1680791804.666232-CDS-P-littoralis_Contig90:300983..301052 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig90 300984..301052 - |
| 1680791804.6778228-CDS-P-littoralis_Contig90:301682..301949 | 1680791804.6778228-CDS-P-littoralis_Contig90:301682..301949 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig90 301683..301949 - |
| 1680791804.6889956-CDS-P-littoralis_Contig90:303249..303324 | 1680791804.6889956-CDS-P-littoralis_Contig90:303249..303324 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig90 303250..303324 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig90.69.1 >prot_P-littoralis_Contig90.69.1 ID=prot_P-littoralis_Contig90.69.1|Name=mRNA_P-littoralis_Contig90.69.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=907bp
MSDQPQYYRITNSLESLSVRIRLRKIFGRSINTKTNNVKTIGGVRSEREN
DANDDKIPGSFVPGDEADVRVKWQEKIFGPEDIVTFSTAQRSGGEKQQQY
RAAGPPNNPLSRLERDYGGQLEDLRRDGIDHLASLSEVMLFTHTDKDGYV
PPCDKAGGGGGGLTTGDGGPFSYLGEAVTNMPRKAANSSLETTTAAGGAS
GVGGGGARAGVSETAAVIQTHLAREDKFKVMYVMAAVDIDVREATKVAKA
RAAALGGSRWKRGEGGGGVHAHEQVVCTIKAHQNGTLEIAPGFSAEEPES
GDEGAFLTDHTVKVMDKEGARLTTYRFTSPSGGVFSYTVENDSEPGGGVE
EMEVWEAEEASRDMWKKASLQQAAGTQLLGAPATGGAVALHAFMEIVSAS
GFTGASRLYTEYALCLPGHWVLAAEQGGGGGGGGEANSAGEDHGGVGGEP
GGFGEIEEFAAGGTTQVASQAYPLAVPRRSLQSNTVTNNIINESNASSSL
GYGASASSSSSSSTRSVTNRYGDATMPAGFRAPPKMVVSGAGVRLGSAVL
LCLLGLLGSLGETPLFWVVLGGAVVVVAALSGGGGGGGGRQEERGEGSSP
IAHFGFPAEFHLVNEEEGETAGIGERPQVLLAVSSLDSLARHRVEGYGYV
SFPRQPGAHELLIRTWRPICSMRTHLQDFFVGGAHRLHDPRYASKPVTFK
GSFLNRFGFRTETSGILRVRLHLAEQGRNRDLHGGFGGAGDGPSIDLAGT
RTVKEILRVVNAKRMGATVSRRFSATMDPASPAAAAAVADPTTSAGSAAP
AAAASALATARGTGAVGKRQTANDGDNDRGGSGGALVDEHSAPMPLLGSR
NPFESTVVPGEGGKRGKIEAAADLLARVKGQLERSEQRTKRSPDERQGIS
DIAPPR* back to topmRNA from alignment at P-littoralis_Contig90:292990..303324- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig90.69.1 ID=mRNA_P-littoralis_Contig90.69.1|Name=mRNA_P-littoralis_Contig90.69.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=10335bp|location=Sequence derived from alignment at P-littoralis_Contig90:292990..303324- (Pylaiella littoralis U1_48)
ATGTCAGACCAACCTCAGTACTACCGCATCACAAACTCCCTGGAATCCCT
CAGCGTTCGCATCAGGCTACGCAAGGTATGTTAAAGAGCTGATGAGATGC
ACAACGGGCCTTCCTGCGGCAAGACACCAGCCATTTATGGCCGCAAAGCT
TTGGTTGGTTCGTTGGCTGCTTCCGCTGTACGTACAGTACCGGCCCGCTA
ATAAGAAACCAGTAAATCTGGCTCAGGCTGACTTCTTATGTTGGGTTGAA
AGTCGAGCATGACACTTTCTTATGTATTGTATAGGATTGAGTGTAGCACT
CGCCACCCAGGCTGGGCACTTTCTTAATTTTCTGAAAATCTCAGGCTGAC
TTTCTTCAAAGGGAGCTTTCTTGTTAGCGGGCCGGTACTGTACTTGTACA
CGTTTCTATTTCCCCTCGGTGTCGTCGAAAAAGCCCAAGCCGTACGAATT
GTACAGCAGGCGTATCATCCATAGAGGATGTTGTGTATGCATGCGATATG
ACGGTGTATAACACCCACACCCCTTGACCGATTCACAACAAAGCTCGACA
TTACGATTATCCTCGGAGGAAGAGTGAGCGTCCGTGACAAAAATAAAATT
GCGGCGTTGGAACCATACACGAGTCCAGAATTTTTTCCGAAATTGTTTCG
TCTCAAGCAGTGTCCACCCTCCTCCTCGTTGGGGTGCATGCCGAGCCTTG
AAGAATGGGGTGTGGTATGCACCGTCATTGTATACGGAAGTCTGCGGGTG
TTCCCGCCCAGCTTCCCACTACACACAGCGATATTGTATGCCTCGCGCCC
CATCACGCATTGGGACTCTGTGTGCAGACGCTCTTGTATGGTATGTGTGT
CGTACCTGCCTTCACGATCGAAGTCAAAGGCGGCAGCACGACTTCGATCT
CCCACCATTTGAAAAGACAGGCAACGAACGACTGCTGTGTGATGATAGTT
TCAGTTTCCACAGAATTCAGCAAGGATGGTGGACCGCTGCTGTATGAGAA
GTCTTTTCGCTTCGAATGAGATGCTTGTTGAATGTTTGTTGTTGATTCTC
ACATTGTGTACTTTGTATGGAAAAGATGCTCAGCTTCTTCCATACTTTTC
CACGTGAGCATAATACTTTCAAGTACAAAGAGAGAGGTGGTCCATGACTT
GCATACACACAGCTCTAAGGGATACAGTAGACACACCAGCAGAGGAAATC
GATGTGTTTGTCCTCTTTGCGTAGTTTCAGCAAAACCAACGATATGAGCG
TTCCTGACCATGACACACGTCACAACAGCACCGCATCGACCACGAGAGTT
CGTGTTCCTGCGGCCACTGACATCCTGTCAACTTATGTCCCATTCACACC
CTCCCCGAAAAAAATATCGGCAAAGATATTCGGGAGGTCGATCAACACCA
AAACGAACAACGTCAAAACCATCGGAGGTGTCCGATCAGAGAGAGAGAAT
GACGCTAACGACGACAAGATACCCGGCTCGTTTGTTCCCGGAGACGAAGC
AGACGTTCGCGTCAAGTGGCAGGAAAAGATCTTCGGCCCTGAGGATATCG
TCACGTTTTCGACCGCCCAACGGAGCGGGGGCGAAAAGCAGCAGCAGTAT
CGCGCGGCGGGCCCCCCTAACAACCCGTTGTCCAGGCTAGAGGTGAGAAG
AGGGAGGAAATTGTGTTCCGACGTACGCACATCACGCACGACACGTCAAG
AGCCCGCTGGACTTATTATTTATTTTTCCAGTCTTCATCGGTGCTTTGGC
AAGCCACATCTGATCTGTCACATCTAGCGCAGAGTAGTCCAAGACGACGT
CAGACGTAAAAATAAAATTATACCTATCCACTTGATGTGTTAGTTGGTCG
CTCCTCGCTTTGCGTGGGCTCGATGGCACTGCCACCCGCCCGGAAGAGGT
TTACTCACTCAAGAACATATGCACAACCACACACATACACACAGACAAAG
AGAGGCACACGCACACACACGTGCGCACGCTTATCTGAACACACATACGA
AAAGCACACGCACACACACATACGAAAAGCACCCGCTCATCTGAACACAC
ATACGAAAAGCACACGCACACACACATACGAAAAGCACCCGCTCATCTGA
ACACACAGACAACCATAATGACACACACTCACAGACACAACACACACACA
CACACGCGCGTGCGTTCGCTAATCTGAACGTGCAGGTTGAAATGCCTATC
AGTATCTGCTGTCCTTCTGCCCGTTTACTAACTTTTTTACGCCCTCTCTC
GCAATCTGTTGCTCGCGACCAGAGGGACTACGGGGGGCAACTGGAAGACC
TACGGCGCGACGGGATCGACCACTTGGCGTCACTCTCGGAGGTAGGTGTG
GTCATATCTGATATACCGTGAATCTCAAGGGTAAAGCTGCACGCTTGCAA
CGGACCCATCCTGCTGTGCCCACCCACACACGCGGGCGGGTAAGACTCAT
GTAGCATATGATAGGAGGTGTCGTGTCGCGCAGCAGATTTTTGTGGTGAA
GTGATGCAAAAGAAGTACAAACAGGCGTGATTTAGTGTGGCGAAGTGATG
CGAATGAAGTACAAACAGTCGGGCTTGGGATCGACGAACGAAGTTGTTTG
TACAGGTGCGTATATGGAGATCGAGCTTGCTATCCTGGCGCGGACAACTA
CCACTTGGCGTTGCTGAGCTGAAAAAACCTAAGCGGTACAGTTTGTGCCC
TTACGTGGCCTCATGCACATGCAACCCCCAGCCACCTAGCCCAACTATAA
ACGTGACGGACGAGTGTTGGGGGGAAAGCAGTAGCGGCGACCGAGCAGAC
ACACAAAGCCTGAACACTAAACACCCACAGCACAAAGACAATGACGACGC
TATTGGTTGAAACGCGCATCATGGCATCGAACGCACTCATTCGCATGCCA
GGTGATGCTCTTCACCCACACGGACAAAGATGGCTACGTTCCCCCTTGCG
ACAAGGCCGGCGGCGGCGGCGGCGGCCTCACCACCGGGGACGGGGGACCT
TTCAGCTACCTTGGAGAAGCGGTGACGAACATGCCTCGGAAGGCCGCAAA
CTCTTCGCTCGAGACGACGACGGCAGCTGGCGGAGCAAGTGGGGTGGGCG
GAGGAGGGGCGCGGGCGGGCGTGTCGGAAACCGCAGCGGTTATTCAGACA
CACTTGGCCCGGGAAGACAAGTTCAAGGTGAAATGCTACGGCCGTACGCT
GTTCTCTGTGATTTCTGATACGTAAGATATGAGGTCGAAGCTACCACTGT
AATACCCTTTCTAGACCACGAAGCATCACATCATCTGGTGCACCGACATG
AAACGTACAACAGCCCCCATTATTCAGTATGTTGTGTTGCCTCCCGCTCC
CACTCTCTCACCGTCGAGAAGTGAAACACCAGGGCTTTTACCGTCAATGG
CCCGAGCCTGTATGGTTTTCCTGACACAAAAAAGTATACTCCGTTTGCGC
AAGTAAACGCACGCAAACGCCGAGCCGTGTCGGTGACGGTATCGGGACGT
TCTGCAGGTGATGTATGTCATGGCGGCTGTGGACATCGACGTGCGCGAGG
CAACTAAAGTAGCGAAAGCTAGAGCAGCAGCACTCGGAGGGTCTCGGTGG
AAAAGGGGGGAGGGCGGTGGCGGTGTGCACGCGCACGAGCAGGTCGTATG
CACCATCAAAGCGCACCAGAACGGGACGCTCGAAATCGCACCAGGTACGC
AACGGTATCTGTGTGGTACAATAGTATATGCGTGCGCGGGTTCTTCCTTG
AAGATCAAGCCTTGAGTCGTGGACTTCTCTCGCATGGCTCGGTTCATCCT
ACCCGCTATTTAATTTGCATGTTTCAGATGGACAAATTGCAGCGTCAGCT
GCTGGCTCTGTTGCCAGGAACCTGGGGGGTTCGCCAGACGATACAGATCC
ACTGTTCTGACAAGCTCTTCTTACGCTTTTGGGGGTTGGGGGGGTTCACT
GGCTGTGCTGTTTAGCAGATGTTGAGCCACGACAAAACCGGACGTTGATT
GTTATGTTCGGATAAAACCGGCAGGTTTTTCGGCAGAGGAGCCGGAATCT
GGAGACGAAGGGGCCTTTCTCACGGACCACACCGTTAAGGTCAGCGAAAC
TCTAAAACTCGGCAGAAAATTGAGCCCGTCTCAACCAAACGGGCAACAAC
AACAAAAAGCATCAAGCGCAGCCTGCGGAGCACGCCCAGTCCTCTAGTCT
ATTACGGAAAGTAGGGGCGAAGTTTACTAATGGGAGGGAATGGCGAGTGG
TAGAGCTTTTCGCTCTCCCTGTGGTAACACTACCCGCACGGACTCAAAAA
AAAAAAAAAAGAGCTCCCACGTTGTTGTTCTCCTCGGTCTAACTCCATGG
CTGAACTCTGATATCGTGCACACGACCCTCGAATGCAATGCATCCAACAA
CAGCCGTTGTGCATCTCATCATGTGCCAGCACGCAAGGACTTGGATTTAC
GTACGTAAGACAGGTACACACATAGTGCGCCAACTTCAATCAACGGTAGA
AAAAGTAAAGCCGGTACAATCCAACGGGCATGTTCTCAACCATGCTGGCG
TGATATCATACGGGAAACTATTTTGTTTACCCAGCTTCGTACTGTAATGC
TTCAAACGTTTGAAGTACAATTTCAATTTGCTTGACAATTATACTTCGTA
TACTGATACCGGTGCCTGGTATCATGCCATGGTTTATATTTTCCTTTGGA
AGAAAATCAGGCGCCTCAAACCCATCTTGTATCCTTTTTGATTCTGCGGT
TTGATGTGGACATCGTCATTGTTCCCCAGGTGATGGACAAGGAAGGGGCG
CGCCTTACGACGTACCGCTTCACCTCTCCCTCAGGCGGGGTGTTTTCTTA
CACCGTGGAAAACGATTCTGAGCCGGGGGGCGGGGTGGAGGAGATGGAGG
TCTGGGAGGCGGAGGAGGCGTCGCGAGACATGTGGAAGAAGGCCTCGCTG
CAGCAGGTGATGTGATGACAAACAGAGATGTGTGTATGATATGCGAAGTA
GGGAGTATATGATATGTCGACACGCCGTATCAAAAAAGTGTCTCTCGTTG
TAGCGGCGCTCGTTGCTGTAGCTCTTTATCGTGAGACAGGTGGGTCAAGG
CCTGCCTGCAGCAGGTGACGACGCGCAAAATATATCCATGGCACGAGGAG
GCTGGAAAACACAAAACACGCATCGTAGGTATTTTTGCGGAGCTCAACGT
AGGTCTTAGCCGTGAAAACATGCGGAACGAGGCCAACCTGGATCATATGT
GGCTTGAATTTGCTTTCCAGGGCACGATAAACGAAAAAGGTTTCCCATGT
ACATACGGAGTACAATGATCGCGAAAAAATAAGTGAGGTGCATACTCTGT
TCCTTGGATGGACTTATCCATCATCGAGACCACTCAATCAGGCGACTTTA
TGTCTATCTATGAACTGAAACACACTTGGCTTGCTTTGGGAGATGATCCA
CTTCTCGCCGGGCAGTAGTGTTGGAAATGTGAGGGGACTACTTGTGCGAA
CGCTTGAGGTTCGCGGTGTTCGCTTGGATTGCTTCACCGTCTGGCGAGTT
TTGCTTCTCATGGGGCAGTCCGGGCCGGAGGGTTTTGATTCGCTAGCCGA
GTTCCTCTTCATAACTTGTAGAGGCCGGCGCACTGCAGAGTTGACGTGTT
CCGAATATTCTGTGACACATGCAACTGCTTGTGGCTTTCGGTTACGTTTA
GCTGATTGCATGTGTATGCAATTTGCGCTCCCACTCTCTTCCTGTGCGCC
AAGCCGCTAAATAACGATACTATATCTCCATATCTGACCGACTACCTCAG
CCGCGTCTATACCAACGATACGCGGGGCCGTGGTTTTCTAAACACGGTAC
ACGTGGATCAAGGTCTGCAACGGGGGCGATGGCCTGTGCTTTCTATTCAG
AGCATCAACATCTACAAGTTTCATGCGTAAACAGAGTGCATTACTATTGT
TGGCGTCTTTACGTCGACACAGACAGGTGGACGCACACCCTCTCTTCGCT
GAGGTGCCGGATGCCCGCACCCATCGTGGAGACCTAGTCAAGGTCGAAAA
CAACCCCCCAAAGTCGCCTTAAGGCCATACCTTGGAATGTGTTCGACCTT
GGCACGGTTTCCATGAGGGATGCGATATTCCGACACCTCGGCAAAGAAGG
GAGGGGTGTAGCTTATCGGTGCACAAACACCCCCACTGACCAAGGTGCCT
GACCCCGAATGACCCCGTGCAGACCTTATCGAGGAGGTTTTGATTGAACT
CGGGAGGTCAATGCCTTGACAAGGTCTGCACAGGGGCATTCGGGGTCTGG
CATCTTGGTCAGTGGCGGCCTTTGTCCACCTGTGCGCGTCTACCTTCAGA
GGACCGTTCTGAACTCTCGGTGAGATCCGACTTCGGTCGTCAGAGGCTTG
CACACGCAAAGCGTACAAGGGCTAATGCTGCAATACAATAAGAACTACGC
AAAATAAATACTTCAGTATTTGCTTCCTGTTTCAGGGAGAAGGAAACGCA
CAAAAAACATATACACAAGAGGAAAGAAAGAGCCTGTGTGAGCGAGCCCT
GCCGGGAAAAATACAGCGCGCGGTACCGGTATGTTTGTTTGGAACACTCA
CACATTAGGGTGTGACCTGCAACAAAGCTCAAGGTTATGGGAAAAACAAC
GATGTATGGCACTTTCGCGTACAGTAGTGCTTTTCGATGCATACATGTGA
TCAAGTGTCCTATTTCTCTTGCTGCGTGCTCTTTCCCACCAACGCCTCAT
CGCAGGCAGCAGGCACGCAACTTCTTGGAGCTCCGGCGACAGGGGGCGCT
GTGGCCTTGCACGCCTTCATGGAGGTGGGCGAGCACTAAAATACGTATCA
CAGTGCTTGATGTAACTTAATTTCCTCCTTACAACATCAATCGAACTGCG
CCTACAATAGTTTCTCAAGCCATTTTCCCTTGGAGCCTCCGAAACAAACA
AAAATATCCTGCGCTAACCATCCAAAATATGGGTGCAAAGTGTTTGGTGG
AGGGAGTGATCGAAGACATTTCTTCTCCCATCACCTCTACAACTCGCCGC
CGCCGCCGCCGCTACCGCCGCCGCCGCCACGTGCATTTATTCGTGTCCCT
CTTCTGTGTCTAATACATAATACGATGTGTACACAAATGGCAAATCCAAC
TCAAACAAATAAACGGCAGATCGTTTCCGCGAGCGGTTTCACGGGGGCTA
GCCGCCTGTACACGGAGTACGCCCTGTGTCTGCCTGGACACTGGGTCTTG
GCGGCAGAACAAGGCGGCGGGGGCGGGGGAGGGGGAGAAGCAAACAGCGC
CGGGGAAGACCACGGCGGGGTCGGAGGGGAACCGGGAGGATTTGGCGAAA
TTGAAGAATTTGCTGCCGGAGGGACCACTCAGGTGAAAAAGAGTCAGCAC
GCGGTGTCGGCGATAGATTTGAGCGATCATTCGGCGCACGGCTGGTCGCT
AGGGAGGGAAGGATGCGCGCGCGGGCGGTGTTGCTATGCCTTCTATAGGG
CACGCTCGCGCCGCTGTGATGTATGCGTAGAAAATAATTGTCCTCATGCA
TTGCCTTAGCTGTTTCGCGTTTTCTTGCTCCGTTCTCTTCAACCAAAACA
ACAAACAAACAGGTAGCCTCCCAAGCCTATCCCCTTGCGGTCCCTCGCCG
ATCGCTCCAATCTAACACCGTCACGAATAACATCATCAACGAGAGCAACG
CCTCGAGCAGCCTCGGGTACGGCGCGTCCGCATCATCATCATCATCATCA
TCAACGCGTTCCGTCACCAACAGATACGGAGATGCTACCATGCCCGCGGG
CTTCCGAGCGCCGCCAAAGATGGTCGTGTCTGGAGCCGGCGTACGCTTGG
GCTCCGCCGTCCTCTTGTGCCTCCTAGGTCTGCTGGGATCTCTCGGAGAG
ACCCCGCTGTTCTGGGTGGTGTTGGGCGGGGCCGTTGTGGTCGTCGCGGC
GCTGAGCGGAGGAGGCGGCGGCGGGGGAGGGAGGCAAGAGGAGAGAGGAG
AAGGAAGCAGCCCCATTGCGCACTTCGGGTTTCCGGCGGAGTTCCACCTT
GTCAACGAGGAGGAGGGGGAGACGGCCGGGATTGGAGAGCGTCCTCAGGT
AGGAGTGTTGTGTGCACGCACGCGTGAGACGCTTTCTTTGATGTGCGTGA
GGTGTGGAGAACGTGGGAGTTTGTAGCTGCGTGCGATGTGTGATGTTCTT
CGGTGCTGCATGCGGTACGGCCAGGCAAAAGACAGCAGTGCCTCAGAAGC
CAGGTCAGGGCGCTTGCCGTGAAACATGCAGAGAAACACATGAAAACAGA
AAAAAAAAACGCATCCGGGCGAAATTTGTTTTTGACCGTCAGAAATAACT
TTTCTCCGCGCGTCCCTGACGCGCGCTATCACCATGCGAACGGATCTTAC
TGCGGCTTCGGCGTGGACAGGTGTTGCTCGCAGTGTCGAGTCTGGATAGT
CTCGCGCGGCATCGCGTCGAAGGGTACGGGTACGTTTCTTTCCCTAGACA
ACCCGGAGCCCACGAGCTACTGATCAGGACGTGGCGTCCGATCTGCAGCA
TGAGGACACACCTTCAGGTGAGCGGCCACCACACCGTGAGCCAGGGGCGC
GGGGGAAGGGGATGAGCCCAATTGCTGGGTACCTAGCCTGGTGTATTGAC
GACAGGAGGGCGGGGAAAATACACGAGTCGGCTTGGTCTGGACCGAACAT
TTCATCAAAGTTCGTGCCTACGTTCCCTGTCCCGGTAAAGTAGGCCTTGC
ACTAAACGTCGAAGGGTAAACCTTGGGAAGAACAGGTTCTCGCAGAAGCA
ACGGGAGCTTCACCGCTGCTCTACGTATCGAGTGCGCAAGACTTCCCTTG
ATGGGGGACCCCAACATCCCCCTGTCTTCTGAACCGCAGGACTTCTTCGT
CGGGGGCGCTCACCGCTTGCACGATCCACGCTATGCGTCGAAGCCCGTTA
CCTTCAAGGGGTCGTTTCTCAACCGTTTTGGTTTTCGGACCGAGACATCA
GGGATCTTGCGGGTGCGCCTTCACCTTGCAGAACAGGTGCGCTCGCGGAC
GTGGCGGGGAGGGAGAGTATGGTTCCACGAGAAGCCTCCGTGTAGAAGTT
GCAGCATGCAGTTGAAAGATCAACGCTTGCGTGTGTTTCGACGGTGGTGT
TAAAACGCTAGCTTTGTGCTGTACGCTCGAGGCGAAACCTCGGGTGAGGG
TGACCACACAGGCAACTTGATTCATCTTCTGATTCAAAGAAAGAGCAAGA
AAGAGTGCGCGGTGCTGGATATCTGGGAATGTTATCGTTGTCGTCTGAAA
CATATGTAGCGGCGTCGGCGTGATGTCCCTCGACGTCATCCAGAAAGTCT
CGAAGTAACGCAACTACAAAGAGGGTGAACCATCTAGTCCTACCCCTGAC
ACAGGCCTTAATGTGTAGAACCTCACAATTTTTTCAGCCACCACAAGACG
GGTCGTCATGTCTACCGCCAAAGAAAAATGTCCCTTCCTCCGACCAAACC
GAGGGGAAACTGGACGGTGAAAGTTTGCACGATATTGCACGACATGAGTT
TTCGTAGCCTCCGCCGCGTCGACCACTTCTTGTCAATCCGTGCAGCAAGA
TGTAGCAATGCTCGCACTCGTGGCAAACTTAATCGACGGTTTAACTAGGG
ACCAGTGTTTGATACTGCGTATCCCACCCATACCACGGTACACCCCGACT
CTCACCTCGCCCCCTTCCGGACAATGCCTATTTTGAATACTTCGAAGTAT
ATACATATATGTATACGTCTTTACGTGCACCTCTGCCATCAGGGGCGCAA
TAGAGATTTACATGGTGGATTTGGAGGCGCAGGGGATGGGCCAAGCATCG
ACCTCGCAGGAACCCGCACGGTGAAGGAGATATTGCGCGTGGTCAACGCT
AAGCGCATGGGGGCTACGGTGAGCCGTCGCTTCAGCGCCACCATGGACCC
GGCGTCCCCTGCCGCCGCCGCCGCCGTAGCCGACCCGACCACATCCGCCG
GGTCCGCTGCCCCTGCCGCTGCTGCCTCTGCCCTAGCGACCGCTCGCGGC
ACAGGAGCGGTAGGAAAAAGGCAGACGGCGAACGACGGGGACAACGACAG
AGGAGGCTCTGGCGGCGCCCTCGTAGATGAGCACAGCGCTCCAATGCCCC
TTCTTGGCTCGCGAAATCCGTTTGAAAGTACCGTTGTGCCAGGAGAGGGC
GGAAAAAGAGGGAAGATCGAAGCGGCGGCGGATCTACTGGCGAGAGTTAA
GGGCCAGCTGGAGAGGTCTGAGCAACGTACGAAGAGGTCGCCCGATGAAC
GTCAAGGCATCAGCGATATCGCCCCTCCCCGGTGA back to topCoding sequence (CDS) from alignment at P-littoralis_Contig90:292990..303324- >mRNA_P-littoralis_Contig90.69.1 ID=mRNA_P-littoralis_Contig90.69.1|Name=mRNA_P-littoralis_Contig90.69.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2721bp|location=Sequence derived from alignment at P-littoralis_Contig90:292990..303324- (Pylaiella littoralis U1_48)
ATGTCAGACCAACCTCAGTACTACCGCATCACAAACTCCCTGGAATCCCT
CAGCGTTCGCATCAGGCTACGCAAGATATTCGGGAGGTCGATCAACACCA
AAACGAACAACGTCAAAACCATCGGAGGTGTCCGATCAGAGAGAGAGAAT
GACGCTAACGACGACAAGATACCCGGCTCGTTTGTTCCCGGAGACGAAGC
AGACGTTCGCGTCAAGTGGCAGGAAAAGATCTTCGGCCCTGAGGATATCG
TCACGTTTTCGACCGCCCAACGGAGCGGGGGCGAAAAGCAGCAGCAGTAT
CGCGCGGCGGGCCCCCCTAACAACCCGTTGTCCAGGCTAGAGAGGGACTA
CGGGGGGCAACTGGAAGACCTACGGCGCGACGGGATCGACCACTTGGCGT
CACTCTCGGAGGTGATGCTCTTCACCCACACGGACAAAGATGGCTACGTT
CCCCCTTGCGACAAGGCCGGCGGCGGCGGCGGCGGCCTCACCACCGGGGA
CGGGGGACCTTTCAGCTACCTTGGAGAAGCGGTGACGAACATGCCTCGGA
AGGCCGCAAACTCTTCGCTCGAGACGACGACGGCAGCTGGCGGAGCAAGT
GGGGTGGGCGGAGGAGGGGCGCGGGCGGGCGTGTCGGAAACCGCAGCGGT
TATTCAGACACACTTGGCCCGGGAAGACAAGTTCAAGGTGATGTATGTCA
TGGCGGCTGTGGACATCGACGTGCGCGAGGCAACTAAAGTAGCGAAAGCT
AGAGCAGCAGCACTCGGAGGGTCTCGGTGGAAAAGGGGGGAGGGCGGTGG
CGGTGTGCACGCGCACGAGCAGGTCGTATGCACCATCAAAGCGCACCAGA
ACGGGACGCTCGAAATCGCACCAGGTTTTTCGGCAGAGGAGCCGGAATCT
GGAGACGAAGGGGCCTTTCTCACGGACCACACCGTTAAGGTGATGGACAA
GGAAGGGGCGCGCCTTACGACGTACCGCTTCACCTCTCCCTCAGGCGGGG
TGTTTTCTTACACCGTGGAAAACGATTCTGAGCCGGGGGGCGGGGTGGAG
GAGATGGAGGTCTGGGAGGCGGAGGAGGCGTCGCGAGACATGTGGAAGAA
GGCCTCGCTGCAGCAGGCAGCAGGCACGCAACTTCTTGGAGCTCCGGCGA
CAGGGGGCGCTGTGGCCTTGCACGCCTTCATGGAGATCGTTTCCGCGAGC
GGTTTCACGGGGGCTAGCCGCCTGTACACGGAGTACGCCCTGTGTCTGCC
TGGACACTGGGTCTTGGCGGCAGAACAAGGCGGCGGGGGCGGGGGAGGGG
GAGAAGCAAACAGCGCCGGGGAAGACCACGGCGGGGTCGGAGGGGAACCG
GGAGGATTTGGCGAAATTGAAGAATTTGCTGCCGGAGGGACCACTCAGGT
AGCCTCCCAAGCCTATCCCCTTGCGGTCCCTCGCCGATCGCTCCAATCTA
ACACCGTCACGAATAACATCATCAACGAGAGCAACGCCTCGAGCAGCCTC
GGGTACGGCGCGTCCGCATCATCATCATCATCATCATCAACGCGTTCCGT
CACCAACAGATACGGAGATGCTACCATGCCCGCGGGCTTCCGAGCGCCGC
CAAAGATGGTCGTGTCTGGAGCCGGCGTACGCTTGGGCTCCGCCGTCCTC
TTGTGCCTCCTAGGTCTGCTGGGATCTCTCGGAGAGACCCCGCTGTTCTG
GGTGGTGTTGGGCGGGGCCGTTGTGGTCGTCGCGGCGCTGAGCGGAGGAG
GCGGCGGCGGGGGAGGGAGGCAAGAGGAGAGAGGAGAAGGAAGCAGCCCC
ATTGCGCACTTCGGGTTTCCGGCGGAGTTCCACCTTGTCAACGAGGAGGA
GGGGGAGACGGCCGGGATTGGAGAGCGTCCTCAGGTGTTGCTCGCAGTGT
CGAGTCTGGATAGTCTCGCGCGGCATCGCGTCGAAGGGTACGGGTACGTT
TCTTTCCCTAGACAACCCGGAGCCCACGAGCTACTGATCAGGACGTGGCG
TCCGATCTGCAGCATGAGGACACACCTTCAGGACTTCTTCGTCGGGGGCG
CTCACCGCTTGCACGATCCACGCTATGCGTCGAAGCCCGTTACCTTCAAG
GGGTCGTTTCTCAACCGTTTTGGTTTTCGGACCGAGACATCAGGGATCTT
GCGGGTGCGCCTTCACCTTGCAGAACAGGGGCGCAATAGAGATTTACATG
GTGGATTTGGAGGCGCAGGGGATGGGCCAAGCATCGACCTCGCAGGAACC
CGCACGGTGAAGGAGATATTGCGCGTGGTCAACGCTAAGCGCATGGGGGC
TACGGTGAGCCGTCGCTTCAGCGCCACCATGGACCCGGCGTCCCCTGCCG
CCGCCGCCGCCGTAGCCGACCCGACCACATCCGCCGGGTCCGCTGCCCCT
GCCGCTGCTGCCTCTGCCCTAGCGACCGCTCGCGGCACAGGAGCGGTAGG
AAAAAGGCAGACGGCGAACGACGGGGACAACGACAGAGGAGGCTCTGGCG
GCGCCCTCGTAGATGAGCACAGCGCTCCAATGCCCCTTCTTGGCTCGCGA
AATCCGTTTGAAAGTACCGTTGTGCCAGGAGAGGGCGGAAAAAGAGGGAA
GATCGAAGCGGCGGCGGATCTACTGGCGAGAGTTAAGGGCCAGCTGGAGA
GGTCTGAGCAACGTACGAAGAGGTCGCCCGATGAACGTCAAGGCATCAGC
GATATCGCCCCTCCCCGGTGA back to top
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