|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 3066 |
| Hectar predicted targeting category | other localisation |
| Exons | 7 |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-11_004175.1 |
| Cds size | 3066 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791804.407649-CDS-P-littoralis_Contig90:286836..286977 | 1680791804.407649-CDS-P-littoralis_Contig90:286836..286977 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig90 286837..286977 + |
| 1680791804.422008-CDS-P-littoralis_Contig90:287808..288018 | 1680791804.422008-CDS-P-littoralis_Contig90:287808..288018 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig90 287809..288018 + |
| 1680791804.4383245-CDS-P-littoralis_Contig90:288039..288175 | 1680791804.4383245-CDS-P-littoralis_Contig90:288039..288175 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig90 288040..288175 + |
| 1680791804.4509559-CDS-P-littoralis_Contig90:288262..288956 | 1680791804.4509559-CDS-P-littoralis_Contig90:288262..288956 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig90 288263..288956 + |
| 1680791804.4697242-CDS-P-littoralis_Contig90:289376..290519 | 1680791804.4697242-CDS-P-littoralis_Contig90:289376..290519 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig90 289377..290519 + |
| 1680791804.4819334-CDS-P-littoralis_Contig90:290815..290873 | 1680791804.4819334-CDS-P-littoralis_Contig90:290815..290873 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig90 290816..290873 + |
| 1680791804.4921296-CDS-P-littoralis_Contig90:291364..292048 | 1680791804.4921296-CDS-P-littoralis_Contig90:291364..292048 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig90 291365..292048 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig90.68.1 >prot_P-littoralis_Contig90.68.1 ID=prot_P-littoralis_Contig90.68.1|Name=mRNA_P-littoralis_Contig90.68.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1022bp
MGREIRDVLNSGLTAWVAMRFAAEKNLQHFFLEMESLLLTHRFSEKEMGQ
RAVWEDEFCSCTYPMIILPPAEAVRHRAGSPSNNNGGGGGGGSVDLSNEP
KSVMDLGPRSSSFSSDSDDNRHHHQQRCFSPNQESEEQQRRMVGAQSLGN
ANFSVNRNLEHSHSTHGGNNDSNSSSSSSGSSITRWGSERAILKGLFSPY
KLAGNGTLPQQYRELDDGCSSFNAMPGGSTAPIKVATTTGTPRGCTNARK
TTTTKTTKTTATIARERVLRRRTWLGPEMSPLLNDQEAGRLKRPSPCGIK
FAAAAWPSPKRNDRWRGGAKQRGIGNLGRNGGSRGGECERGVQQQRRRVG
CFQRYVDYKGGAEVSPPGRAPVAQVREIESGPQLGYCANVHTENRKRRNS
VCGHPTVSSQFGYSGEERVIATSDFSATPREKWHPPPPCLVEVRASSATC
VGYFGSSGGEIADGKQSFPTTTRPLNGGGTTGGLATGEKVSQPLAHTHQE
EQDGGTEHTPMDYRANPTGGVGCCELQQKLSMGVPHPLRGTGQSCSADRG
EETGAEAVVAREGTEAKVGTKRRTNGRNQSENAGKGTLAGDIDRVQRKSI
VNNRYTERRPDTDTISGSMPPARPEGGKSYSKDRNRDEVLADPVVGDPHD
KPGPTFRHYSGHNDDDVDRNTEGQAYGDAGVGTALVSPAATAGAEVAAAP
SSKAPIPFQFSTPELAATFLPVREQRSVRRQQQQQSQLLAESLAHHQHQT
EPLNRQQPSCQHRHNASEDQDDRSEQEKHVMLLTKRLKQLAQLESITIQW
ERLPRKGRERLDRQQHLISSRFRVTEQVQRDNSFPLPVAPSLGVYGSIGP
FGEAGSTNDSGSSNSHHHPTTFGIYNNNDVILPPSDATIFSSIDRPQSSG
SIAAGAGTDVATTPDTRGSSNDEGSETDVKVGAGSLGVAAAKGTPWNADA
KASGPMHAVATPWNERRRRGSGSMGKLGGSSEVACGLLDADIASDLPRRG
RLGGLSLGIVGMRTPWIPGDQ* back to topmRNA from alignment at P-littoralis_Contig90:286837..292048+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig90.68.1 ID=mRNA_P-littoralis_Contig90.68.1|Name=mRNA_P-littoralis_Contig90.68.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5212bp|location=Sequence derived from alignment at P-littoralis_Contig90:286837..292048+ (Pylaiella littoralis U1_48)
ATGGGACGAGAGATAAGAGATGTTTTGAACAGCGGGCTTACTGCATGGGT
TGCCATGCGCTTCGCTGCGGAGAAGAACCTACAGCACTTCTTTTTGGAGA
TGGAGAGCTTACTTCTCACGCACAGGTTTTCTGAAAAAGAAGTGGGGACG
TCGGAATCGAACCCACGACTTTTGACCTAGTCGACGTAAAATTTGAGGAG
TAGATGGTTGAGCGTCGACGGTCGACGCCAAATAAATGTGAAGGAGTAGA
CTGCTCAGCCATCAGGTAAAAGGCAAACCATTTACCCGAGTGAGGACTAC
ACCTACCTCTTAACACTGCTGTGACATCGTTGATTTTTGTCCCTCGATTG
TTCTGAGGGAGCTATACGTAGGTTCTGGGAACGAAAGGACTATACAGACA
GACGAAGGGCGGGTGTTGTTCGGCTTCTCGCCGATCCGTTCATTCGCTCG
AGGATGATATAAGGACTATACGTACAGTATATACTCCGGTATCTTGCACG
TTTTCCGCCACGGTGTGAAAAGCAACAACGTCCCCCAGTCAAGCGTGAAG
ACTGGGGATTTTGATTCCCGCCTGAACTGCTGTGTGGTGTGTGTTTGCGT
CCTGTGGTGTAGTCATCCCACCACGTATTTTTTCCATCATATTATACCTA
CGTTCAAGGGAACGACTGTAGTCTAATGAAGTACTTCGAAATACCGTTTA
TTACACTGCATACATGTTACACAAAGTTAGGGTTGAGGGGGGTTATTGCT
ATTGATTTTATTATTTTATTTCTTTGAGATACGGCGCTGCTTGTCTTCAG
CATTTTTATATCGTCGGCACTGCTGCGGTGTCGCCTCTATCTCGCCCCCC
CCTCCCCCCTTCTGTACGGTATCATTCACCCAACCAAACGTTAACGTTGC
CAGTCAGTAAAAATCCATTCACATACGTACACCGACCGATTCAACCACGT
CTTATTTTTGTTGTTGTGGCAGATGGGACAACGCGCTGTATGGGAGGATG
AATTTTGCTCTTGTACATATCCCATGATTATCCTTCCTCCAGCTGAGGCC
GTAAGGCATCGAGCTGGGAGCCCCAGCAATAACAACGGCGGCGGCGGCGG
CGGCGGCAGCGTTGACCTTAGCAACGAGCCGAAGAGCGTGATGGACTTGG
GACCGAGATCGTCGTCGTTTAGCTCTGATTCAGTCAAATTCGACACCACC
TAGGATGATAACCGTCACCACCACCAACAGCGATGCTTCTCTCCGAATCA
AGAATCAGAGGAGCAGCAGCGGAGAATGGTGGGGGCTCAATCCCTGGGAA
ACGCGAACTTTTCAGTCAACCGTAACCTCGAACATTCCCGTAATAACAAG
CCTGGACAGGCTTCGATCGGACAACGGAGCAGCAATGGGCCGGGCCTAGC
TGCAGGAAACAGGGACCCTCGACGAGATTCCACTCACGGCGGCAACAACG
ACAGCAACAGCAGCAGTAGTAGCAGCGGCAGTAGCATTACCAGATGGGGC
AGTGAGAGAGCTATTTTGAAGGGACTTTTCAGCCCTTACAAGCTGGCCGG
AAATGGAACCCTACCACAGCAATATCGTGAGCTCGACGATGGGTGTAGCA
GTTTTAATGCGATGCCCGGCGGCTCTACTGCCCCGATAAAAGTAGCAACA
ACGACGGGCACGCCCCGCGGCTGCACAAACGCCAGGAAAACAACAACAAC
AAAAACAACAAAAACAACGGCAACGATCGCCCGAGAAAGGGTCCTGCGCC
GTAGGACGTGGCTCGGCCCCGAGATGTCCCCGCTCCTGAACGACCAAGAG
GCCGGGCGCCTCAAACGCCCAAGCCCTTGCGGTATTAAGTTTGCCGCAGC
GGCTTGGCCCAGCCCCAAGCGGAATGACAGATGGAGGGGAGGAGCGAAGC
AGCGCGGCATCGGCAACCTCGGTAGGAACGGCGGCAGCAGGGGGGGCGAA
TGTGAACGTGGGGTGCAGCAGCAACGCAGAAGAGTAGGTTGTTTCCAGCG
ATACGTCGATTACAAGGGCGGGGCAGAGGTCAGCCCGCCCGGGCGCGCAC
CGGTTGCGCAGGTGAGAGAGATAGAAAGCGGACCGCAACTCGGATACTGC
GCGAATGTCCACACTGAAAAGTAGGAGATGTCGGGACCTGCTGTGGTGCT
CCCTGATTGAAATGTTTACTCCTCTGTGACATATGTGCGATACCAACCAA
AACACCACAATAACATGTCATTTGTGTTGAAACTAGGGCTAAAAATGGGT
TCTGCTTTTGCCGCAATCAAGGCGGAGGAGCGGGGAGCTGAGCTGCTCGT
CGCTCTGTTCTTACAGTCATGAGCGAGCGCATTAGTTTCGTCTGCCGTTG
ATCCGTTTAATCATCGTCGAAAATGGTTCTAAGTAGGGCGAACCGAAGAC
CTCAGAAAAAATCGGATTGTGTGAACAACACGACTGTACGTTTCTCGCAC
TCACTCATTGCTGTTCCAGCAGGAGTTTCAGGGACTACCGGGGGTGAAAG
TTGGACGGGAATCGCCAGGTACTCTTTCTCGTTACCCAAGCCGGAAGAGG
AGAAACAGCGTATGTGGCCATCCTACGGTATCATCACAATTTGGATATAG
TGGAGAGGAACGGGTAATCGCTACGAGCGATTTTTCGGCAACTCCTCGGG
AAAAATGGCACCCGCCTCCTCCGTGCCTCGTCGAGGTGCGCGCCAGCTCG
GCGACCTGCGTCGGCTACTTCGGTTCTTCTGGCGGAGAAATCGCCGATGG
AAAACAAAGTTTCCCGACGACCACGCGGCCACTCAATGGCGGCGGAACAA
CGGGGGGACTGGCAACTGGTGAGAAAGTATCACAGCCGCTGGCACACACG
CATCAGGAGGAGCAAGACGGAGGCACCGAGCACACACCGATGGATTATCG
TGCAAATCCCACCGGCGGTGTCGGTTGCTGTGAGCTGCAGCAGAAGCTGT
CTATGGGAGTCCCACACCCACTACGGGGAACGGGACAAAGCTGCTCAGCC
GATCGAGGTGAGGAGACGGGAGCGGAAGCGGTGGTGGCGAGGGAGGGCAC
GGAGGCGAAAGTGGGGACGAAACGGAGAACGAACGGCCGTAATCAAAGCG
AAAATGCAGGCAAGGGTACTTTGGCTGGAGACATCGATCGTGTACAACGG
AAGTCCATCGTAAACAACCGATATACCGAGCGCAGGCCTGATACCGATAC
CATATCCGGGTCGATGCCTCCAGCACGACCTGAGGGGGGCAAATCATACA
GTAAGGATCGAAACAGGGATGAGGTACTAGCTGATCCTGTCGTTGGCGAC
CCTCACGACAAGCCTGGGCCAACGTTCAGGCATTATAGCGGCCACAACGA
CGACGATGTGGACAGGAACACGGAAGGCCAGGCTTACGGCGACGCCGGCG
TCGGCACAGCCCTCGTGTCGCCTGCGGCAACAGCAGGAGCGGAAGTAGCA
GCAGCGCCATCGTCGAAAGCACCGATCCCGTTTCAGTTTTCCACTCCCGA
GCTTGCGGCCACCTTTTTACCCGTGCGGGAGCAGCGTAGTGTTCGACGAC
AACAACAGCAGCAGTCTCAGCTTCTGGCGGAATCACTAGCGCACCACCAG
CATCAAACCGAACCTCTCAATCGGCAGCAGCCGTCGTGTCAGCACCGACA
TAATGCGAGTGAAGACCAAGATGATCGGTCGGAGTGCATAATCTCGCGAG
AAAGTGGTTGTCGAGAGCGCCCGAATCACACCGAACAGTTTTGAATCCAG
AATCGTCAGGGCCTAATTTCAAATAGCTACTTGTACATCAACTCGGGAGT
ACTATGACAGTCTACGGTGGCATTCCTAGTACAAGCTATGCTCGCTCGTC
GATTTCATCGCTTGCTGCGTGTCATTCGAACGCTGCGCGCTAAACCGTCG
TCTGACGCTCTTATATTCCTCCTGCTACGATGCGCACAACATGCCCGCGG
CGTGACAATACACCGACGAAACATTGCAGACAGGAGAAGCACGTGATGTT
GCTGACCAAGCGTTTAAAGCAGCTGGCGCAACTCGAGGTGCGCGAACGTA
TGACTTTCGGTCGGCGTAGCAGGCTGGTAGAAGAAGCGTGGAAACGTTGA
TTTATTAGTTTCTAATTGTAAACAGCACCGCGAAATACGCACGATATTTT
TGACATGTTATCTGTGGCAAGTATAGCGTTTCGTTCAATGGTTTCATGCG
TACGTAGAAGAAAGCAGTACTCTGCGATCTACTTCAGTAGGCTTATTTTT
ACTCTTTATGAACTTTCACTCCTCCAAAACGTCAACTTGTACTTACTCTG
GAGTATGCAAAACTTTAAAAGTTTATTTGGGGGGAGCTCGCGGGTTATGT
TTAAAGTCTTACCCGTTGTTGACCAACCAACGTTCCACCGTTCGAAGACA
TCCACAGTTTAAACGAATGATGCCCACTGTAGTTTGTCAATGTTTCGCTC
GCACCCGCTGGCTTGGTGCCCCTCCTCCGCCTCGTGATGACGATGTCTCG
GCGTGGGTTGAAATACAAAACAAATAAGTCAATAACGATCCAGTGGGAGC
GGTTGCCGCGGAAGGGCCGAGAGAGGCTCGACCGGCAGCAGCACCTGATA
AGCTCTCGCTTTCGGGTCACAGAACAAGTGCAACGGGACAACAGCTTTCC
TTTGCCCGTGGCCCCCTCTCTGGGGGTATACGGCAGTATTGGGCCTTTCG
GAGAAGCAGGGAGCACAAACGACAGCGGCAGCAGCAACAGCCACCACCAC
CCTACCACTTTCGGCATCTACAACAATAACGATGTCATACTACCCCCGTC
TGACGCGACAATTTTTTCGAGTATCGACCGTCCTCAATCCAGCGGAAGTA
TCGCCGCTGGCGCTGGGACTGACGTCGCCACCACCCCGGACACCAGAGGG
TCAAGCAATGACGAGGGATCGGAGACGGACGTCAAAGTAGGGGCTGGATC
GCTTGGGGTTGCTGCTGCGAAAGGTACGCCCTGGAATGCTGATGCCAAGG
CTTCAGGACCTATGCATGCCGTGGCGACGCCATGGAATGAGAGGAGGCGG
AGGGGGTCAGGGAGCATGGGGAAGCTGGGTGGCAGTAGCGAGGTGGCGTG
CGGTCTTCTAGATGCAGATATTGCCAGCGATCTTCCCAGGAGGGGGCGGC
TCGGGGGCTTATCGTTGGGTATTGTAGGAATGCGGACTCCATGGATACCG
GGAGATCAATGA back to topCoding sequence (CDS) from alignment at P-littoralis_Contig90:286837..292048+ >mRNA_P-littoralis_Contig90.68.1 ID=mRNA_P-littoralis_Contig90.68.1|Name=mRNA_P-littoralis_Contig90.68.1|organism=Pylaiella littoralis U1_48|type=CDS|length=3066bp|location=Sequence derived from alignment at P-littoralis_Contig90:286837..292048+ (Pylaiella littoralis U1_48)
ATGGGACGAGAGATAAGAGATGTTTTGAACAGCGGGCTTACTGCATGGGT
TGCCATGCGCTTCGCTGCGGAGAAGAACCTACAGCACTTCTTTTTGGAGA
TGGAGAGCTTACTTCTCACGCACAGGTTTTCTGAAAAAGAAATGGGACAA
CGCGCTGTATGGGAGGATGAATTTTGCTCTTGTACATATCCCATGATTAT
CCTTCCTCCAGCTGAGGCCGTAAGGCATCGAGCTGGGAGCCCCAGCAATA
ACAACGGCGGCGGCGGCGGCGGCGGCAGCGTTGACCTTAGCAACGAGCCG
AAGAGCGTGATGGACTTGGGACCGAGATCGTCGTCGTTTAGCTCTGATTC
AGATGATAACCGTCACCACCACCAACAGCGATGCTTCTCTCCGAATCAAG
AATCAGAGGAGCAGCAGCGGAGAATGGTGGGGGCTCAATCCCTGGGAAAC
GCGAACTTTTCAGTCAACCGTAACCTCGAACATTCCCATTCCACTCACGG
CGGCAACAACGACAGCAACAGCAGCAGTAGTAGCAGCGGCAGTAGCATTA
CCAGATGGGGCAGTGAGAGAGCTATTTTGAAGGGACTTTTCAGCCCTTAC
AAGCTGGCCGGAAATGGAACCCTACCACAGCAATATCGTGAGCTCGACGA
TGGGTGTAGCAGTTTTAATGCGATGCCCGGCGGCTCTACTGCCCCGATAA
AAGTAGCAACAACGACGGGCACGCCCCGCGGCTGCACAAACGCCAGGAAA
ACAACAACAACAAAAACAACAAAAACAACGGCAACGATCGCCCGAGAAAG
GGTCCTGCGCCGTAGGACGTGGCTCGGCCCCGAGATGTCCCCGCTCCTGA
ACGACCAAGAGGCCGGGCGCCTCAAACGCCCAAGCCCTTGCGGTATTAAG
TTTGCCGCAGCGGCTTGGCCCAGCCCCAAGCGGAATGACAGATGGAGGGG
AGGAGCGAAGCAGCGCGGCATCGGCAACCTCGGTAGGAACGGCGGCAGCA
GGGGGGGCGAATGTGAACGTGGGGTGCAGCAGCAACGCAGAAGAGTAGGT
TGTTTCCAGCGATACGTCGATTACAAGGGCGGGGCAGAGGTCAGCCCGCC
CGGGCGCGCACCGGTTGCGCAGGTGAGAGAGATAGAAAGCGGACCGCAAC
TCGGATACTGCGCGAATGTCCACACTGAAAACCGGAAGAGGAGAAACAGC
GTATGTGGCCATCCTACGGTATCATCACAATTTGGATATAGTGGAGAGGA
ACGGGTAATCGCTACGAGCGATTTTTCGGCAACTCCTCGGGAAAAATGGC
ACCCGCCTCCTCCGTGCCTCGTCGAGGTGCGCGCCAGCTCGGCGACCTGC
GTCGGCTACTTCGGTTCTTCTGGCGGAGAAATCGCCGATGGAAAACAAAG
TTTCCCGACGACCACGCGGCCACTCAATGGCGGCGGAACAACGGGGGGAC
TGGCAACTGGTGAGAAAGTATCACAGCCGCTGGCACACACGCATCAGGAG
GAGCAAGACGGAGGCACCGAGCACACACCGATGGATTATCGTGCAAATCC
CACCGGCGGTGTCGGTTGCTGTGAGCTGCAGCAGAAGCTGTCTATGGGAG
TCCCACACCCACTACGGGGAACGGGACAAAGCTGCTCAGCCGATCGAGGT
GAGGAGACGGGAGCGGAAGCGGTGGTGGCGAGGGAGGGCACGGAGGCGAA
AGTGGGGACGAAACGGAGAACGAACGGCCGTAATCAAAGCGAAAATGCAG
GCAAGGGTACTTTGGCTGGAGACATCGATCGTGTACAACGGAAGTCCATC
GTAAACAACCGATATACCGAGCGCAGGCCTGATACCGATACCATATCCGG
GTCGATGCCTCCAGCACGACCTGAGGGGGGCAAATCATACAGTAAGGATC
GAAACAGGGATGAGGTACTAGCTGATCCTGTCGTTGGCGACCCTCACGAC
AAGCCTGGGCCAACGTTCAGGCATTATAGCGGCCACAACGACGACGATGT
GGACAGGAACACGGAAGGCCAGGCTTACGGCGACGCCGGCGTCGGCACAG
CCCTCGTGTCGCCTGCGGCAACAGCAGGAGCGGAAGTAGCAGCAGCGCCA
TCGTCGAAAGCACCGATCCCGTTTCAGTTTTCCACTCCCGAGCTTGCGGC
CACCTTTTTACCCGTGCGGGAGCAGCGTAGTGTTCGACGACAACAACAGC
AGCAGTCTCAGCTTCTGGCGGAATCACTAGCGCACCACCAGCATCAAACC
GAACCTCTCAATCGGCAGCAGCCGTCGTGTCAGCACCGACATAATGCGAG
TGAAGACCAAGATGATCGGTCGGAACAGGAGAAGCACGTGATGTTGCTGA
CCAAGCGTTTAAAGCAGCTGGCGCAACTCGAGTCAATAACGATCCAGTGG
GAGCGGTTGCCGCGGAAGGGCCGAGAGAGGCTCGACCGGCAGCAGCACCT
GATAAGCTCTCGCTTTCGGGTCACAGAACAAGTGCAACGGGACAACAGCT
TTCCTTTGCCCGTGGCCCCCTCTCTGGGGGTATACGGCAGTATTGGGCCT
TTCGGAGAAGCAGGGAGCACAAACGACAGCGGCAGCAGCAACAGCCACCA
CCACCCTACCACTTTCGGCATCTACAACAATAACGATGTCATACTACCCC
CGTCTGACGCGACAATTTTTTCGAGTATCGACCGTCCTCAATCCAGCGGA
AGTATCGCCGCTGGCGCTGGGACTGACGTCGCCACCACCCCGGACACCAG
AGGGTCAAGCAATGACGAGGGATCGGAGACGGACGTCAAAGTAGGGGCTG
GATCGCTTGGGGTTGCTGCTGCGAAAGGTACGCCCTGGAATGCTGATGCC
AAGGCTTCAGGACCTATGCATGCCGTGGCGACGCCATGGAATGAGAGGAG
GCGGAGGGGGTCAGGGAGCATGGGGAAGCTGGGTGGCAGTAGCGAGGTGG
CGTGCGGTCTTCTAGATGCAGATATTGCCAGCGATCTTCCCAGGAGGGGG
CGGCTCGGGGGCTTATCGTTGGGTATTGTAGGAATGCGGACTCCATGGAT
ACCGGGAGATCAATGA back to top
|