mRNA_P-littoralis_Contig90.53.4 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig90.53.4 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE) HSP 1 Score: 450 bits (1157), Expect = 2.660e-155 Identity = 219/330 (66.36%), Postives = 259/330 (78.48%), Query Frame = 1
Query: 13 PRAKRTRCIKERKNWKQSAWWTQLQEEELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDMDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHS 1002
P+ KRTR + +R++W+ SAWW +LQ+ +LA T+ AAKVFRERFRVP+ FF LV+LSR K+WFS G DAA REGIP+ELK+L G+GNCFDD+ QLS MS+S+A A FHKFC++ A EMF+EHIYLPTGTY DEVM + +LG TGA GSTDVTH+G MCPFTLGRSFTGKEGFPT+A+EVTVDHAGRA+ VT GF G TNDKT +RYD+ V IR Y +REYKLRK +GTE TR+GC+LIVDNGY+E +D AFS+ LE+VRKDVECFFGILKGRFRILKLR+ YH RE IDNIFFTCCILHNMLH+
Sbjct: 57 PKVKRTRRVTQRRDWRTSAWWEKLQDVDLADHTTAAAKVFRERFRVPYPFFQELVKLSRAKRWFSPGEKDAANREGIPLELKVL------GKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTRRGCFLIVDNGYYE------------SNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHT 368
BLAST of mRNA_P-littoralis_Contig90.53.4 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 450 bits (1157), Expect = 1.280e-153 Identity = 213/361 (59.00%), Postives = 272/361 (75.35%), Query Frame = 1
Query: 31 RCIKERKNWKQSAWWTQLQE-EELAV-----PTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDMDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDF 1095
R + RK++ S W QLQE ++L V PTS A+ FRE FR+P+ FF+ LV L +++ WF G DA+GR GIPV+LK+L LQIL RGNCF DI +S +S AAATFH+F + FA+EM+ EHI+LPTG YQ +VM Y +LGF+GA GSTDVTH+ WGMCP+ RS+TGKEG+PT+A++VTVDH R + VT GFTG+TNDK+ +RYD AV IR + +Y ++E+ + +ADGT + KGCYL+VDNGYH+WVTL+ PSKYP D +D AFSK LE+VRKDVECFFGI+KGRFRILKL + YH +EDIDN+FFTCCILHNMLHS+D S +E +WAG+AGLH+ +H P D
Sbjct: 77 RRVYPRKDYNISGWAIQLQELKDLEVDGIVDPTSRPARRFRESFRLPYPFFVELVALVKQRDWFPTGKQDASGRRGIPVQLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDL 437
BLAST of mRNA_P-littoralis_Contig90.53.4 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 431 bits (1108), Expect = 5.570e-146 Identity = 205/368 (55.71%), Postives = 262/368 (71.20%), Query Frame = 1
Query: 1 DDDVPRAKRTRCIKERKNWKQSAWWTQLQEEELAVPTSDA---AKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDMDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDF 1095
DD+ R + R + RK++ +S WW +L E T A+ FR FRVP+ FF+ LVEL R++ WF G +D GR+ +PVELK+L LQIL RGN F DI +S +S A+TFH+FCK FA E+++E++YLPTG +VM+ Y ++GF GA+GSTDVTH+ WGMCP+ R +TGKEG PT+AF+VTVDH+GR + VT+GFTGATNDKT +RYD AV IR + VY +++YKL DG +F KGCYL+VDNGYH+W TL+ PSK P D D FSK LE+ RKDVEC+FGILKGRFRI KL + +H +E IDN+FFTCCILHNMLHSFD E +WAGSAGLH+ D P+TD+
Sbjct: 86 DDEASREVKRRRVYVRKDYTKSGWWQELMELRETGETDHTTREARRFRNNFRVPYPFFVHLVELVRDRDWFPTGESDVTGRQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDY 453
BLAST of mRNA_P-littoralis_Contig90.53.4 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE) HSP 1 Score: 409 bits (1050), Expect = 4.520e-139 Identity = 191/274 (69.71%), Postives = 223/274 (81.39%), Query Frame = 1
Query: 274 QILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDMDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDF 1095
Q+LG+GNCFDD+ QLS MSKSMA TFHKFC++FA EMF+EHIYLPTGTY DEVM + +LG+TGA GSTDVTH+GW MCPFTLGRSFTGKEGFPT+A++VTVDH GR + VT GFTGATNDKT +RYD+ V IR Y +REYKLRKA+GT+ R+GC+LIVDNGYHEWVTL+APSKYP +D AFS+ LE+VRKDV CF RILKLR+ YH RE +DNIFFTCCILHNMLH+FDG+ VF+EN DW GSAG HD +H P TD+
Sbjct: 42 QVLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHDPLTDY 307
BLAST of mRNA_P-littoralis_Contig90.53.4 vs. uniprot
Match: A0A6H5KEB6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB6_9PHAE) HSP 1 Score: 416 bits (1070), Expect = 2.310e-138 Identity = 243/518 (46.91%), Postives = 288/518 (55.60%), Query Frame = 1
Query: 13 PRAKRTRCIKERKNWKQSAWWTQLQEEELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTAL-----QILGRGN----------CFDD----------------INQLSLMSK-----------SMAAATF---------------------------------HKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNG----------YHE---------------WVTLMAPSKYPGDMDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYH-------------------------------------C--------------------REDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDF 1095
P+AKRTR + +R++W+ SAWW QLQ +LA T+ AA VFR RFRVP+ FF LV+LSR K+WFS G D A REGIP+ELK+ T+ Q+ G N FD+ +QL +M T HKFC++FA EMF+EHIYL TGTY DEVM + +LG TGA GST+VTH+GW MCPFTLGRSFTGKEGFPT+A EVTVDHAGRA+ VT GFTGATNDKT +RYD+ V IR Y +REYKLRKA+GTE TR+GC+LIVDNG +H+ WVTL+APSKYP +D AFS+ LE+VRKDVECFFGILKGRFRILKLR+ YH C RE IDNIFFTCCILHNMLH+FDG+ VF+EN DW GSAG HD +H P TD+
Sbjct: 57 PKAKRTRRVTQRRDWRTSAWWEQLQHVDLADHTTAAATVFRGRFRVPYPFFQNLVKLSRAKRWFSPGEKDTANREGIPLELKLRTSTPVEDEQVDGTSNHKFCRHFAAEMFDEHIYLLTGTYLDEVMGIFHQLGCTGACGSTNVTHIGWNMCPFTLGRSFTGKEGFPTIACEVTVDHAGRALAVTNGFTHKFCRHFAAEMFDEHIYLLTGTYLDEVMGIFHQLGCTGACGSTNVTHIGWNMCPFTLGRSFTGKEGFPTIACEVTVDHAGRALAVTNGFTGATNDKTIIRYDSGVNKIRTESQYTEREYKLRKANGTERTRRGCFLIVDNGMSVPKDLCVVHHKNIVAKLPSSERVLIWWVTLIAPSKYPQSNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTGGXFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHDPLTDY 574
BLAST of mRNA_P-littoralis_Contig90.53.4 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 399 bits (1024), Expect = 8.410e-135 Identity = 194/341 (56.89%), Postives = 244/341 (71.55%), Query Frame = 1
Query: 40 KERKNWKQSAWWTQLQEEELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDMDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAG 1056
++RK ++ AW L++++L S ++K FR FRVP +FFLRLV L + K WF+ G DAA R+ PVE K+L L ILGRGNCF I Q+S MS FHKFCK+FA+EM++EHIYLP+ D VM Y +LGF+GA+GS DVTH+GW CP+ L RS+TGKEG PT+ ++VTV+HAGRAI VT+GFT +TNDKT V +DA V+ IR + Y ++ + + DGT T KGCYL+VDNGYH+W LM P+KYP +D FSK LE+VRKDVECFFGILKG FRI K+ +AYH +E IDN+FFTCCILHNMLH+FDGM EN W SAG
Sbjct: 26 RKRKEVEKCAWAQMLEDKDLEDSNSISSKQFRLDFRVPDSFFLRLVALVKSKDWFTTSGCDAARRQSHPVEHKVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLWVSSAG 366
BLAST of mRNA_P-littoralis_Contig90.53.4 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 396 bits (1018), Expect = 5.930e-133 Identity = 197/343 (57.43%), Postives = 242/343 (70.55%), Query Frame = 1
Query: 67 AWWTQLQEEELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDMDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDT 1089
AW L++E+L PTS AAK FRE FRVP+ FFLRLVEL ++K WF+ DA GR PVE K+L L ILGRGN F I LS MS FH+FC++FA EM++EHI+LP+ D VM Y KLGF GA+GSTDVTH+GW CP+ GRS+TGKEG PT+ ++VTV+HAGR + VT+GFTG+TNDKT + D AV IR +K Y ++ + + K DGT T KGCYLIVDNGYH+W L+ PSKYP D FSK LE+VRKDVECFFGILK RFRILKL + Y +E +D +FFTCCILHNMLH+ DGM +E+V+W GSA L + H D+
Sbjct: 64 AWAQVLEDEDLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFATTQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNTSGHNLDS 406
BLAST of mRNA_P-littoralis_Contig90.53.4 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 373 bits (957), Expect = 5.780e-124 Identity = 190/356 (53.37%), Postives = 232/356 (65.17%), Query Frame = 1
Query: 82 LQEEELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYK----------------------------DREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDMDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGL 1059
L++++L TS AK R FRVP+ FLRLV L + K WFS DA G PVE K+L L ILGRGNCF I Q+S MS FHKFC++FA+EM++E I+LPT D VM Y +LGFTGA+GS DVTH+ W CP+ RS+TGKEGFPT+A++VTVDHAGRAI VT+GFTG+TNDKT V +D AV+ I +K Y ++ + + DGT T KGCYL+VDNGYH+W L+ PSKYP +D FSK LE+VRKDVECFFGILKGRFRILKL + Y +E IDN+FFTC ILHNMLH+FDGM EN +W SAG+
Sbjct: 27 LEDKDLEDSTSITAKQLRVDFRVPYTVFLRLVALVKSKNWFSTAVTDAVGWASHPVEHKVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSAGV 382
BLAST of mRNA_P-littoralis_Contig90.53.4 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 365 bits (938), Expect = 1.520e-121 Identity = 169/284 (59.51%), Postives = 212/284 (74.65%), Query Frame = 1
Query: 244 PVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDMDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDF 1095
P ++L LQIL RGN F DI +S +S A+TFH+FCK FA E+++E++YLPTG +VM+ Y ++GF GA+GSTDVTH+ WGMCP+ R +TGKEG PT+AF+VTVDH+GR + VT+GFTGATNDKT +RYD AV IR + VY +++YKL DG +F KGCYL+VDNGYH+W TL+ PSK P D D FSK LE+ RKDVEC+FGILKGRFRI KL + +H +E IDN+FFTCCILHNMLHSFD E +WAGSAGLH+ D P+TD+
Sbjct: 79 PPHTQVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDY 362
BLAST of mRNA_P-littoralis_Contig90.53.4 vs. uniprot
Match: A0A6H5JCU6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCU6_9PHAE) HSP 1 Score: 357 bits (915), Expect = 1.950e-117 Identity = 196/383 (51.17%), Postives = 224/383 (58.49%), Query Frame = 1
Query: 7 DVPRAKRTRCIKERKNWKQSAWWTQLQEEELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELK--------------------------------------------------------------------------------------------------------------ILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGD 825
D P KR+R +KER++W SAWW QLQ +L T++AAKVFR RFRVPHAFFL LV+++R KKWFS DA GR GIP+ELK ILTALQILGRGNCFDDI QLSLMSK MAAATFHKFCK+FA+E+FEEHIYLPTG+YQDEVM Y KLG TGAIGSTDVTH+GWGMCPFTLGRS+TGKEGFPT+A++VTVDHAGRAI +T GFTGATNDKT +RYDA V TI+ + Y R YKLR+ADGT RKGCY IVDNGYHE +L P++ D
Sbjct: 57 DGPPVKRSRQVKERRDWSTSAWWLQLQNADLLDHTTEAAKVFRTRFRVPHAFFLELVKMARGKKWFSVREKDAVGRRGIPIELKLSSYRSGLLLLVVNCSDVPSIEPMRWIVVHNFTRWYRRVHSSTAVVAEHGSMGNVPCTVTRTSHRWHRKYCCRRPTAREKRRTLWFRLHTFQTRGHLRGHATTFDAASTKILTALQILGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPTGSYQDEVMCMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHTIKTDAQYTKRTYKLRRADGTFRERKGCYYIVDNGYHEVNSLGHPNRMRED 439 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig90.53.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig90.53.4 >prot_P-littoralis_Contig90.53.4 ID=prot_P-littoralis_Contig90.53.4|Name=mRNA_P-littoralis_Contig90.53.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=365bp DDDVPRAKRTRCIKERKNWKQSAWWTQLQEEELAVPTSDAAKVFRERFRVback to top mRNA from alignment at P-littoralis_Contig90:199292..201803- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig90.53.4 ID=mRNA_P-littoralis_Contig90.53.4|Name=mRNA_P-littoralis_Contig90.53.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=2512bp|location=Sequence derived from alignment at P-littoralis_Contig90:199292..201803- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig90:199292..201803- >mRNA_P-littoralis_Contig90.53.4 ID=mRNA_P-littoralis_Contig90.53.4|Name=mRNA_P-littoralis_Contig90.53.4|organism=Pylaiella littoralis U1_48|type=CDS|length=1095bp|location=Sequence derived from alignment at P-littoralis_Contig90:199292..201803- (Pylaiella littoralis U1_48)back to top |