mRNA_P-littoralis_Contig90.53.4 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig90.53.4
Unique NamemRNA_P-littoralis_Contig90.53.4
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig90.53.4 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE)

HSP 1 Score: 450 bits (1157), Expect = 2.660e-155
Identity = 219/330 (66.36%), Postives = 259/330 (78.48%), Query Frame = 1
Query:   13 PRAKRTRCIKERKNWKQSAWWTQLQEEELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDMDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHS 1002
            P+ KRTR + +R++W+ SAWW +LQ+ +LA  T+ AAKVFRERFRVP+ FF  LV+LSR K+WFS G  DAA REGIP+ELK+L      G+GNCFDD+ QLS MS+S+A A FHKFC++ A EMF+EHIYLPTGTY DEVM  + +LG TGA GSTDVTH+G  MCPFTLGRSFTGKEGFPT+A+EVTVDHAGRA+ VT GF G TNDKT +RYD+ V  IR    Y +REYKLRK +GTE TR+GC+LIVDNGY+E              +D AFS+ LE+VRKDVECFFGILKGRFRILKLR+ YH RE IDNIFFTCCILHNMLH+
Sbjct:   57 PKVKRTRRVTQRRDWRTSAWWEKLQDVDLADHTTAAAKVFRERFRVPYPFFQELVKLSRAKRWFSPGEKDAANREGIPLELKVL------GKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTRRGCFLIVDNGYYE------------SNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHT 368          
BLAST of mRNA_P-littoralis_Contig90.53.4 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 450 bits (1157), Expect = 1.280e-153
Identity = 213/361 (59.00%), Postives = 272/361 (75.35%), Query Frame = 1
Query:   31 RCIKERKNWKQSAWWTQLQE-EELAV-----PTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDMDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDF 1095
            R +  RK++  S W  QLQE ++L V     PTS  A+ FRE FR+P+ FF+ LV L +++ WF  G  DA+GR GIPV+LK+L  LQIL RGNCF DI  +S +S   AAATFH+F + FA+EM+ EHI+LPTG YQ +VM  Y +LGF+GA GSTDVTH+ WGMCP+   RS+TGKEG+PT+A++VTVDH  R + VT GFTG+TNDK+ +RYD AV  IR + +Y ++E+ + +ADGT +  KGCYL+VDNGYH+WVTL+ PSKYP D +D AFSK LE+VRKDVECFFGI+KGRFRILKL + YH +EDIDN+FFTCCILHNMLHS+D  S  +E  +WAG+AGLH+  +H P  D 
Sbjct:   77 RRVYPRKDYNISGWAIQLQELKDLEVDGIVDPTSRPARRFRESFRLPYPFFVELVALVKQRDWFPTGKQDASGRRGIPVQLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDL 437          
BLAST of mRNA_P-littoralis_Contig90.53.4 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 431 bits (1108), Expect = 5.570e-146
Identity = 205/368 (55.71%), Postives = 262/368 (71.20%), Query Frame = 1
Query:    1 DDDVPRAKRTRCIKERKNWKQSAWWTQLQEEELAVPTSDA---AKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDMDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDF 1095
            DD+  R  + R +  RK++ +S WW +L E      T      A+ FR  FRVP+ FF+ LVEL R++ WF  G +D  GR+ +PVELK+L  LQIL RGN F DI  +S +S    A+TFH+FCK FA E+++E++YLPTG    +VM+ Y ++GF GA+GSTDVTH+ WGMCP+   R +TGKEG PT+AF+VTVDH+GR + VT+GFTGATNDKT +RYD AV  IR + VY +++YKL   DG +F  KGCYL+VDNGYH+W TL+ PSK P D  D  FSK LE+ RKDVEC+FGILKGRFRI KL + +H +E IDN+FFTCCILHNMLHSFD      E  +WAGSAGLH+  D  P+TD+
Sbjct:   86 DDEASREVKRRRVYVRKDYTKSGWWQELMELRETGETDHTTREARRFRNNFRVPYPFFVHLVELVRDRDWFPTGESDVTGRQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDY 453          
BLAST of mRNA_P-littoralis_Contig90.53.4 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 409 bits (1050), Expect = 4.520e-139
Identity = 191/274 (69.71%), Postives = 223/274 (81.39%), Query Frame = 1
Query:  274 QILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDMDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDF 1095
            Q+LG+GNCFDD+ QLS MSKSMA  TFHKFC++FA EMF+EHIYLPTGTY DEVM  + +LG+TGA GSTDVTH+GW MCPFTLGRSFTGKEGFPT+A++VTVDH GR + VT GFTGATNDKT +RYD+ V  IR    Y +REYKLRKA+GT+  R+GC+LIVDNGYHEWVTL+APSKYP   +D AFS+ LE+VRKDV CF        RILKLR+ YH RE +DNIFFTCCILHNMLH+FDG+ VF+EN DW GSAG HD  +H P TD+
Sbjct:   42 QVLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHDPLTDY 307          
BLAST of mRNA_P-littoralis_Contig90.53.4 vs. uniprot
Match: A0A6H5KEB6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB6_9PHAE)

HSP 1 Score: 416 bits (1070), Expect = 2.310e-138
Identity = 243/518 (46.91%), Postives = 288/518 (55.60%), Query Frame = 1
Query:   13 PRAKRTRCIKERKNWKQSAWWTQLQEEELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTAL-----QILGRGN----------CFDD----------------INQLSLMSK-----------SMAAATF---------------------------------HKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNG----------YHE---------------WVTLMAPSKYPGDMDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYH-------------------------------------C--------------------REDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDF 1095
            P+AKRTR + +R++W+ SAWW QLQ  +LA  T+ AA VFR RFRVP+ FF  LV+LSR K+WFS G  D A REGIP+ELK+ T+      Q+ G  N           FD+                 +QL                +M   T                                  HKFC++FA EMF+EHIYL TGTY DEVM  + +LG TGA GST+VTH+GW MCPFTLGRSFTGKEGFPT+A EVTVDHAGRA+ VT GFTGATNDKT +RYD+ V  IR    Y +REYKLRKA+GTE TR+GC+LIVDNG          +H+               WVTL+APSKYP   +D AFS+ LE+VRKDVECFFGILKGRFRILKLR+ YH                                     C                    RE IDNIFFTCCILHNMLH+FDG+ VF+EN DW GSAG HD  +H P TD+
Sbjct:   57 PKAKRTRRVTQRRDWRTSAWWEQLQHVDLADHTTAAATVFRGRFRVPYPFFQNLVKLSRAKRWFSPGEKDTANREGIPLELKLRTSTPVEDEQVDGTSNHKFCRHFAAEMFDEHIYLLTGTYLDEVMGIFHQLGCTGACGSTNVTHIGWNMCPFTLGRSFTGKEGFPTIACEVTVDHAGRALAVTNGFTHKFCRHFAAEMFDEHIYLLTGTYLDEVMGIFHQLGCTGACGSTNVTHIGWNMCPFTLGRSFTGKEGFPTIACEVTVDHAGRALAVTNGFTGATNDKTIIRYDSGVNKIRTESQYTEREYKLRKANGTERTRRGCFLIVDNGMSVPKDLCVVHHKNIVAKLPSSERVLIWWVTLIAPSKYPQSNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTGGXFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHDPLTDY 574          
BLAST of mRNA_P-littoralis_Contig90.53.4 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 399 bits (1024), Expect = 8.410e-135
Identity = 194/341 (56.89%), Postives = 244/341 (71.55%), Query Frame = 1
Query:   40 KERKNWKQSAWWTQLQEEELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDMDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAG 1056
            ++RK  ++ AW   L++++L    S ++K FR  FRVP +FFLRLV L + K WF+  G DAA R+  PVE K+L  L ILGRGNCF  I Q+S MS       FHKFCK+FA+EM++EHIYLP+      D VM  Y +LGF+GA+GS DVTH+GW  CP+ L RS+TGKEG PT+ ++VTV+HAGRAI VT+GFT +TNDKT V +DA V+ IR +  Y ++ + +   DGT  T KGCYL+VDNGYH+W  LM P+KYP   +D  FSK LE+VRKDVECFFGILKG FRI K+ +AYH +E IDN+FFTCCILHNMLH+FDGM    EN  W  SAG
Sbjct:   26 RKRKEVEKCAWAQMLEDKDLEDSNSISSKQFRLDFRVPDSFFLRLVALVKSKDWFTTSGCDAARRQSHPVEHKVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLWVSSAG 366          
BLAST of mRNA_P-littoralis_Contig90.53.4 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 396 bits (1018), Expect = 5.930e-133
Identity = 197/343 (57.43%), Postives = 242/343 (70.55%), Query Frame = 1
Query:   67 AWWTQLQEEELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDMDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDT 1089
            AW   L++E+L  PTS AAK FRE FRVP+ FFLRLVEL ++K WF+    DA GR   PVE K+L  L ILGRGN F  I  LS MS       FH+FC++FA EM++EHI+LP+      D VM  Y KLGF GA+GSTDVTH+GW  CP+  GRS+TGKEG PT+ ++VTV+HAGR + VT+GFTG+TNDKT +  D AV  IR +K Y ++ + + K DGT  T KGCYLIVDNGYH+W  L+ PSKYP    D  FSK LE+VRKDVECFFGILK RFRILKL + Y  +E +D +FFTCCILHNMLH+ DGM   +E+V+W GSA L +   H  D+
Sbjct:   64 AWAQVLEDEDLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFATTQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNTSGHNLDS 406          
BLAST of mRNA_P-littoralis_Contig90.53.4 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 373 bits (957), Expect = 5.780e-124
Identity = 190/356 (53.37%), Postives = 232/356 (65.17%), Query Frame = 1
Query:   82 LQEEELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYK----------------------------DREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDMDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGL 1059
            L++++L   TS  AK  R  FRVP+  FLRLV L + K WFS    DA G    PVE K+L  L ILGRGNCF  I Q+S MS       FHKFC++FA+EM++E I+LPT      D VM  Y +LGFTGA+GS DVTH+ W  CP+   RS+TGKEGFPT+A++VTVDHAGRAI VT+GFTG+TNDKT V +D AV+ I  +K Y                             ++ + +   DGT  T KGCYL+VDNGYH+W  L+ PSKYP   +D  FSK LE+VRKDVECFFGILKGRFRILKL + Y  +E IDN+FFTC ILHNMLH+FDGM    EN +W  SAG+
Sbjct:   27 LEDKDLEDSTSITAKQLRVDFRVPYTVFLRLVALVKSKNWFSTAVTDAVGWASHPVEHKVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSAGV 382          
BLAST of mRNA_P-littoralis_Contig90.53.4 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 365 bits (938), Expect = 1.520e-121
Identity = 169/284 (59.51%), Postives = 212/284 (74.65%), Query Frame = 1
Query:  244 PVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDMDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDF 1095
            P   ++L  LQIL RGN F DI  +S +S    A+TFH+FCK FA E+++E++YLPTG    +VM+ Y ++GF GA+GSTDVTH+ WGMCP+   R +TGKEG PT+AF+VTVDH+GR + VT+GFTGATNDKT +RYD AV  IR + VY +++YKL   DG +F  KGCYL+VDNGYH+W TL+ PSK P D  D  FSK LE+ RKDVEC+FGILKGRFRI KL + +H +E IDN+FFTCCILHNMLHSFD      E  +WAGSAGLH+  D  P+TD+
Sbjct:   79 PPHTQVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDY 362          
BLAST of mRNA_P-littoralis_Contig90.53.4 vs. uniprot
Match: A0A6H5JCU6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCU6_9PHAE)

HSP 1 Score: 357 bits (915), Expect = 1.950e-117
Identity = 196/383 (51.17%), Postives = 224/383 (58.49%), Query Frame = 1
Query:    7 DVPRAKRTRCIKERKNWKQSAWWTQLQEEELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELK--------------------------------------------------------------------------------------------------------------ILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGD 825
            D P  KR+R +KER++W  SAWW QLQ  +L   T++AAKVFR RFRVPHAFFL LV+++R KKWFS    DA GR GIP+ELK                                                                                                              ILTALQILGRGNCFDDI QLSLMSK MAAATFHKFCK+FA+E+FEEHIYLPTG+YQDEVM  Y KLG TGAIGSTDVTH+GWGMCPFTLGRS+TGKEGFPT+A++VTVDHAGRAI +T GFTGATNDKT +RYDA V TI+ +  Y  R YKLR+ADGT   RKGCY IVDNGYHE  +L  P++   D
Sbjct:   57 DGPPVKRSRQVKERRDWSTSAWWLQLQNADLLDHTTEAAKVFRTRFRVPHAFFLELVKMARGKKWFSVREKDAVGRRGIPIELKLSSYRSGLLLLVVNCSDVPSIEPMRWIVVHNFTRWYRRVHSSTAVVAEHGSMGNVPCTVTRTSHRWHRKYCCRRPTAREKRRTLWFRLHTFQTRGHLRGHATTFDAASTKILTALQILGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPTGSYQDEVMCMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHTIKTDAQYTKRTYKLRRADGTFRERKGCYYIVDNGYHEVNSLGHPNRMRED 439          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig90.53.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSI7_9PHAE2.660e-15566.36DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5JAU4_9PHAE1.280e-15359.00Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE5.570e-14655.71Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K796_9PHAE4.520e-13969.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEB6_9PHAE2.310e-13846.91DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JHI0_9PHAE8.410e-13556.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBE2_9PHAE5.930e-13357.43Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNX4_9PHAE5.780e-12453.37DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KY50_9PHAE1.520e-12159.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCU6_9PHAE1.950e-11751.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig90contigP-littoralis_Contig90:199292..201803 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FSK2
PFAMsPlant_tran
Model size1097
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue8.3e-98
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size1095
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791803.3051214-CDS-P-littoralis_Contig90:199292..1996011680791803.3051214-CDS-P-littoralis_Contig90:199292..199601Pylaiella littoralis U1_48CDSP-littoralis_Contig90 199293..199601 -
1680791803.3190153-CDS-P-littoralis_Contig90:200171..2006991680791803.3190153-CDS-P-littoralis_Contig90:200171..200699Pylaiella littoralis U1_48CDSP-littoralis_Contig90 200172..200699 -
1680791803.3314698-CDS-P-littoralis_Contig90:201545..2018031680791803.3314698-CDS-P-littoralis_Contig90:201545..201803Pylaiella littoralis U1_48CDSP-littoralis_Contig90 201546..201803 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig90.53.4prot_P-littoralis_Contig90.53.4Pylaiella littoralis U1_48polypeptideP-littoralis_Contig90 199293..201803 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig90.53.4

>prot_P-littoralis_Contig90.53.4 ID=prot_P-littoralis_Contig90.53.4|Name=mRNA_P-littoralis_Contig90.53.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=365bp
DDDVPRAKRTRCIKERKNWKQSAWWTQLQEEELAVPTSDAAKVFRERFRV
PHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCF
DDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYR
KLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRA
IGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRK
GCYLIVDNGYHEWVTLMAPSKYPGDMDDAAFSKMLETVRKDVECFFGILK
GRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGS
AGLHDPKDHAPDTDF
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mRNA from alignment at P-littoralis_Contig90:199292..201803-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig90.53.4 ID=mRNA_P-littoralis_Contig90.53.4|Name=mRNA_P-littoralis_Contig90.53.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=2512bp|location=Sequence derived from alignment at P-littoralis_Contig90:199292..201803- (Pylaiella littoralis U1_48)
GACGACGACGTGCCGCGTGCGAAGCGGACGAGATGCATCAAGGAGCGAAA GAACTGGAAGCAGTCTGCCTGGTGGACGCAACTTCAGGAGGAAGAACTTG CCGTGCCCACGTCCGATGCGGCGAAGGTATTCCGAGAGCGCTTTCGCGTG CCTCACGCCTTCTTCCTGAGGTTGGTGGAGCTGTCGAGGGAGAAGAAGTG GTTCTCAGACGGAGGAGCGGATGCAGCAGGCCGTGAGGGTATCCCAGTAG AGCTCAAGGTGCGCTTGAAAATGACACTTCGTACGAAGCATAACATACTG GAAAATAATATAGATGGTGTGTGTACAAGTATAAAATACAGCAGCTTTCC ACTGCTGTACGTCACACAACTGCTGTCCACAGACCGCCGTCCCCCTCATG ACTGCAGCACAACTGCTGCGCCTGACGAAAGTCTGCATGCCTTTCGGGGC CGGTATATCTGTGAAGCACTTGCAGCTGTAGGGTATGCGAGACAAATCAA ATGCGCAACGATTTTTGTGGGACGACGAGGACTAGCGAATTAACCTATCT ATTCTGGATAACAAAGTGTCGCAGACGGATATCACCACAGCAGTGTGTGT TGCTGATGCTGCCGAAGATACCGCTGCAGGTTTTTGGGTACTCTTCTGTG CCCCACTCCTGGGTCGGTGGTTATTACGAGGTACTTATATTCCGAACCTT TCTTGATTGGTCGTTTCGGGTCGAGTGGATGCGGAAACACGGGAATGCAA CCATACATGACTGCTGTACTGCTGTAGACTGGCTAGCAGAATAGATGGGA TGGCAACACAACACAACAGTATTTATCACGCTTTCACGTAAAAAAAAACA TGCCGTTGCTGCGCCACCACGTGACGCTATTCCGACACAACAGCTGTCAC GATGTGTGTATGTGTAAATCAAAACATCATCCGTAATACGAAATCATGTA TCTGCCTGATTCGTATGCACGGACTACTTAAAATGGTAGTTTTCCAGCCG AGCGAATCGGGCAACAGCAACTAGTTGACTGATGGACACTCCCGCCCCCC CCCTTTTCTCCCCGCCGCCGCGCGCTCCCCCCTCCCCCTGACATTATTCG ACAGATCTTGACGGCCCTCCAGATACTCGGCAGGGGCAACTGCTTCGACG ACATCAACCAGCTGTCGTTAATGAGCAAATCGATGGCGGCAGCAACGTTC CACAAGTTCTGCAAGAACTTCGCGAAGGAGATGTTCGAGGAGCATATCTA CCTTCCAACAGGAACGTACCAAGACGAAGTGATGGACTGCTACCGCAAAC TGGGTTTTACTGGAGCAATCGGTTCTACCGACGTCACTCACGTCGGTTGG GGCATGTGTCCGTTCACCCTTGGCCGTTCTTTCACGGGCAAGGAGGGGTT TCCAACCCTGGCGTTCGAGGTTACTGTCGACCACGCGGGCCGCGCCATTG GCGTCACCCAAGGGTTCACCGGTGCGACCAACGACAAGACGAACGTCCGC TACGACGCAGCCGTACAGACCATCAGGAACAACAAAGTGTACAAGGATCG AGAGTACAAGCTCAGGAAGGCGGATGGCACGGAGTTCACCCGGAAAGGAT GCTATTTGATCGTCGACAACGGCTATCACGAGGTGAGTGTATTGGGGGCC TGGGGAGTATTAGAATATCCGAACGTAGTGCGTGCTCCGTGACGCTTCGG GTTGATGTGAAGCCCGAAAATTACACGCCGGTACACCGAAAGCAGACCAA TGCCATATTTGTCGGTACTGAATGAGAATCTTTATGGCATGTCGGCCCCG TGCATCGGGCGTCGACCTTACGCAGCGGCACACCAAGGTGAAAAACAATT TGCCGCTTCGCGTTCCTTCTATTTGTAGAGTTGTTTTCGTGCTGGTTCCG TTTGGACGGTTGCGTTCACTTTCTTACATTTCGAGCATACATCACCCCAT TTATAACACCAAAGGTTTTAACAAACAAATCTGCTCAGGGGTGGTCAGAT GGCAAATATTGTACTTCGAAGTACAAAGTTGTAGGCATCTGTGTTGCCCA CATGTCCACACGGTTCCTCGTTCCCCCCGAGGAGTTTGATCGTGAAAATA TGTGCGTCGGGGCCTGAGGTTTCCAGAGCCTTTCCGTAGCTCACCAGTCG TCCCTTTCGACCCCCCCTGCTACTGTTGTGCCGCCGTGTGCCAAATCAAC AGTGGGTCACCCTCATGGCCCCATCGAAGTACCCGGGTGACATGGATGAC GCGGCCTTCTCCAAGATGCTTGAGACTGTGCGCAAGGATGTGGAGTGTTT CTTCGGCATTCTGAAAGGGCGCTTCAGAATCCTGAAGCTCCGCCTGGCCT ACCACTGCAGGGAAGACATCGATAACATCTTCTTCACGTGCTGCATTCTC CACAACATGCTCCACTCCTTCGACGGCATGAGCGTGTTCAAGGAGAACGT CGACTGGGCAGGCAGCGCTGGTCTGCACGACCCCAAGGACCACGCCCCAG ACACGGACTTCA
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Coding sequence (CDS) from alignment at P-littoralis_Contig90:199292..201803-

>mRNA_P-littoralis_Contig90.53.4 ID=mRNA_P-littoralis_Contig90.53.4|Name=mRNA_P-littoralis_Contig90.53.4|organism=Pylaiella littoralis U1_48|type=CDS|length=1095bp|location=Sequence derived from alignment at P-littoralis_Contig90:199292..201803- (Pylaiella littoralis U1_48)
GACGACGACGTGCCGCGTGCGAAGCGGACGAGATGCATCAAGGAGCGAAA
GAACTGGAAGCAGTCTGCCTGGTGGACGCAACTTCAGGAGGAAGAACTTG
CCGTGCCCACGTCCGATGCGGCGAAGGTATTCCGAGAGCGCTTTCGCGTG
CCTCACGCCTTCTTCCTGAGGTTGGTGGAGCTGTCGAGGGAGAAGAAGTG
GTTCTCAGACGGAGGAGCGGATGCAGCAGGCCGTGAGGGTATCCCAGTAG
AGCTCAAGATCTTGACGGCCCTCCAGATACTCGGCAGGGGCAACTGCTTC
GACGACATCAACCAGCTGTCGTTAATGAGCAAATCGATGGCGGCAGCAAC
GTTCCACAAGTTCTGCAAGAACTTCGCGAAGGAGATGTTCGAGGAGCATA
TCTACCTTCCAACAGGAACGTACCAAGACGAAGTGATGGACTGCTACCGC
AAACTGGGTTTTACTGGAGCAATCGGTTCTACCGACGTCACTCACGTCGG
TTGGGGCATGTGTCCGTTCACCCTTGGCCGTTCTTTCACGGGCAAGGAGG
GGTTTCCAACCCTGGCGTTCGAGGTTACTGTCGACCACGCGGGCCGCGCC
ATTGGCGTCACCCAAGGGTTCACCGGTGCGACCAACGACAAGACGAACGT
CCGCTACGACGCAGCCGTACAGACCATCAGGAACAACAAAGTGTACAAGG
ATCGAGAGTACAAGCTCAGGAAGGCGGATGGCACGGAGTTCACCCGGAAA
GGATGCTATTTGATCGTCGACAACGGCTATCACGAGTGGGTCACCCTCAT
GGCCCCATCGAAGTACCCGGGTGACATGGATGACGCGGCCTTCTCCAAGA
TGCTTGAGACTGTGCGCAAGGATGTGGAGTGTTTCTTCGGCATTCTGAAA
GGGCGCTTCAGAATCCTGAAGCTCCGCCTGGCCTACCACTGCAGGGAAGA
CATCGATAACATCTTCTTCACGTGCTGCATTCTCCACAACATGCTCCACT
CCTTCGACGGCATGAGCGTGTTCAAGGAGAACGTCGACTGGGCAGGCAGC
GCTGGTCTGCACGACCCCAAGGACCACGCCCCAGACACGGACTTC
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