prot_P-littoralis_Contig90.27.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig90.27.1
Unique Name	prot_P-littoralis_Contig90.27.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	366

Homology

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BLAST of mRNA_P-littoralis_Contig90.27.1 vs. uniprot
Match: D8LIN3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIN3_ECTSI)

HSP 1 Score: 215 bits (548), Expect = 7.950e-64
Identity = 137/228 (60.09%), Postives = 159/228 (69.74%), Query Frame = 0

Query:   16 MTLALGGSPLVGRHIKRGGKSPG-AATPKPPGTKGAPAALATDESGIVLDRLGKEIVTLLQAGGAKKKAVRRRLRLGINEVTRFLEAIAAAAAATVPEPSSFSSCGGAPPRGKDGESSKNKTARQGEGGGDGDRPGAAGGKRPACSPHPTSSPVPPAAAIVLICRDVRPARLVEHVHALVALTGTPHLILSQSSSSLGEMFGCKTMAAMAVCPARSPPPLPQALSRPP 242
            MTLAL GSPLVGR++KRGGKSP  A++P   GTKGA  AL T+ES IVLDRLGKEIVTLLQAGG+KK A RRRLR+GINEVT+FLE+ AAAAAA    PSS S       +G    S K  +A+ G G          G +    +P P  +P     AIVLICRDVRPARLVEHVHALV LT TP L+LS+ SSSLG +FGCKTMAA+A+CPAR+P P   +   PP
Sbjct:    1 MTLALAGSPLVGRNVKRGGKSPKHASSPGSSGTKGAALALETNESKIVLDRLGKEIVTLLQAGGSKKDAARRRLRMGINEVTKFLESKAAAAAAPPKTPSSASRGSSINRQGISKASGKCDSAQAGAG-------AEVGARASLVAPAPPHTPP----AIVLICRDVRPARLVEHVHALVVLTATPFLVLSEPSSSLGGVFGCKTMAALAICPARTPRPAQTSSISPP 217

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BLAST of mRNA_P-littoralis_Contig90.27.1 vs. uniprot
Match: W7TQK6_9STRA (Ribosomal protein L7Ae/L8/Nhp2 family n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQK6_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 5.370e-6
Identity = 26/51 (50.98%), Postives = 38/51 (74.51%), Query Frame = 0

Query:  173 AIVLICRDVRPARLVEHVHALVALTGTPHLILSQSSSSLGEMFGCKTMAAM 223
            +++LICRDVRPARLVEHV  L A+   P  +L +++S+LG+  G K +AA+
Sbjct:  198 SLILICRDVRPARLVEHVAVLAAVRDVPFFLLPKATSALGQALGLKCIAAL 248

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig90.27.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig90.27.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LIN3_ECTSI	7.950e-64	60.09	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
W7TQK6_9STRA	5.370e-6	50.98	Ribosomal protein L7Ae/L8/Nhp2 family n=1 Tax=Nann...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029064	50S ribosomal protein L30e-like	GENE3D	3.30.1330.30		coord: 65..231 e-value: 2.3E-10 score: 42.3
IPR029064	50S ribosomal protein L30e-like	SUPERFAMILY	55315	L30e-like	coord: 172..224
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 254..271
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 301..318
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 232..338
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..52

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig90	contig	P-littoralis_Contig90:126011..128986 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig90.27.1	mRNA_P-littoralis_Contig90.27.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig90 125844..129829 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig90.27.1 ID=prot_P-littoralis_Contig90.27.1|Name=mRNA_P-littoralis_Contig90.27.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=366bp
MSASSGGRTKKQGRSMTLALGGSPLVGRHIKRGGKSPGAATPKPPGTKGA
PAALATDESGIVLDRLGKEIVTLLQAGGAKKKAVRRRLRLGINEVTRFLE
AIAAAAAATVPEPSSFSSCGGAPPRGKDGESSKNKTARQGEGGGDGDRPG
AAGGKRPACSPHPTSSPVPPAAAIVLICRDVRPARLVEHVHALVALTGTP
HLILSQSSSSLGEMFGCKTMAAMAVCPARSPPPLPQALSRPPHSAADPGG
TEDIIAQQPTSSGQDGSRSGGSGSGGGEGGGVGARSGGGGSSAMLSATRE
RVDGGGEEEGRKEEGAGRGELVGGGSGGGSVAPDDRDRVAVDEDVDSFIE
FLRRKVRVRSSTTTT*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR029064	L30e-like