prot_P-littoralis_Contig90.11.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig90.11.1
Unique Nameprot_P-littoralis_Contig90.11.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length606
Homology
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BLAST of mRNA_P-littoralis_Contig90.11.1 vs. uniprot
Match: A0A6H5K7R5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7R5_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 1.950e-24
Identity = 216/411 (52.55%), Postives = 236/411 (57.42%), Query Frame = 0 
Query:    6 MNSVFWTVCAVGGFASVSQAFLQPSSSIIVSSSGATRRAPVGAAARRNADSLDTCRMSASDNDSGKKSGRGIDGKSDRPALNNPFLAAAVGAALLSSDPAATLAAQSARGAVFPEGGSSPAPPTLVLSAKAVAPTDDSKLKDLLGEYKIARDSSTAPAPAPAAK-------------EAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------AQAKAKAAVETKXXXXXXXXXXXXXXXXXXXXXLTEKIKSARSDFGTSKMGPSKKVIASSSPVKGVVAVKDPQEVLVEGLRAEKLSVLAEVRTQSEVLSSAQATLNENS 372
            M  VFWTVCAV GFASVSQAFLQPSS IIVSS  ATRRA     +R +      CRMSA+D   G             PAL NPFL AAVG ALLS+DPAATLAAQSAR AV P G                    D  LKDLLGEY  ARD  +A APA                 E  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   PAXXXXXXXXXXXXXXXXXXXXXXXXXX     XXXXXXXXX  XXXXXXXXXX                               A A  KAA   K                     LT+KIK+AR DFGT KMGP  K IA+++ V      KDPQEV +E +RA++ + +  VRTQSEVL +AQ  L++N+
Sbjct:    1 MKGVFWTVCAVSGFASVSQAFLQPSS-IIVSS--ATRRAAADTRSRNDV----PCRMSAADESDGAS-----------PALKNPFLVAAVGMALLSTDPAATLAAQSAREAVLP-GXXXXXXXXXXXXXXXXXTAGDPMLKDLLGEYNSARDKPSA-APAXXXXXXXXXXXXXXXKVEKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAXXXXXXXXXXXXXXXXXXXXXXXXXXAAPKAXXXXXXXXXPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAAALAAEKAAAAEKKA-------------------LTDKIKAAREDFGTVKMGPDTKAIATTTKVASK-PTKDPQEVALEEIRAQRSAAMKTVRTQSEVLKAAQIKLSDNN 371
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BLAST of mRNA_P-littoralis_Contig90.11.1 vs. uniprot
Match: D8LCQ4_ECTSI (SHQ1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCQ4_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 2.100e-10
Identity = 41/77 (53.25%), Postives = 56/77 (72.73%), Query Frame = 0 
Query:  297 LTEKIKSARSDFGTSKMGPSKKVIASSSPVK-GVVAVKDPQEVLVEGLRAEKLSVLAEVRTQSEVLSSAQATLNENS 372
            LT+KIK+AR DFGT KMGP KK IA+++  K      KDPQEV +E +RA++ + +  VRTQSEVL +AQ  L++N+
Sbjct:  266 LTDKIKAAREDFGTVKMGPDKKAIATTTTTKVASKPTKDPQEVALEEIRAQRSAAMKTVRTQSEVLKAAQIKLSDNN 342
[Close]
BLAST of mRNA_P-littoralis_Contig90.11.1 vs. uniprot
Match: D8LIM9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIM9_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 7.270e-5
Identity = 31/67 (46.27%), Postives = 45/67 (67.16%), Query Frame = 0 
Query:  297 LTEKIKSARSDFGTSKMGPSKKVIASSSPVK-GVVAVKDPQEVLVEGLRAEKLSVLAEVRTQSEVLS 362
            LT+KIK+AR DFGT KMGP KK IA+++  K      KDPQEV +E +RA++ ++  E   + + L+
Sbjct:   62 LTDKIKAAREDFGTVKMGPDKKAIATTTTTKVASKPTKDPQEVALEEIRAQRSALKQEADAKKKQLA 128
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig90.11.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K7R5_9PHAE1.950e-2452.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCQ4_ECTSI2.100e-1053.25SHQ1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LIM9_ECTSI7.270e-546.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 261..307
NoneNo IPR availableCOILSCoilCoilcoord: 449..469
NoneNo IPR availableCOILSCoilCoilcoord: 361..381
NoneNo IPR availableCOILSCoilCoilcoord: 521..598
NoneNo IPR availableCOILSCoilCoilcoord: 398..418
NoneNo IPR availableCOILSCoilCoilcoord: 477..511
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 427..454
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..219
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 271..306
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 469..499
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..311
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 517..605
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 230..254

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig90contigP-littoralis_Contig90:78236..99700 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig90.11.1mRNA_P-littoralis_Contig90.11.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig90 76996..99840 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig90.11.1 ID=prot_P-littoralis_Contig90.11.1|Name=mRNA_P-littoralis_Contig90.11.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=606bp
MKGCSMNSVFWTVCAVGGFASVSQAFLQPSSSIIVSSSGATRRAPVGAAA
RRNADSLDTCRMSASDNDSGKKSGRGIDGKSDRPALNNPFLAAAVGAALL
SSDPAATLAAQSARGAVFPEGGSSPAPPTLVLSAKAVAPTDDSKLKDLLG
EYKIARDSSTAPAPAPAAKEAAPQPAKNAAPAPQAEAPKPAPKADAPKPE
APQPAPKVVPAPAPAPELLKAAAPTPSKAVPAAPAAPKPKPAPKPAPAPK
KKAPSGPSPEAKAAQAKAKAAVETKAKEEKAAAEAAEKAAAAEKKALTEK
IKSARSDFGTSKMGPSKKVIASSSPVKGVVAVKDPQEVLVEGLRAEKLSV
LAEVRTQSEVLSSAQATLNENSKKLETAEKKIADDRFKMKTTKTKKVREQ
LDAEIEAQQQLATKARANVKTASATIKQSGKELKTATSNSKTLSTRLTKE
EASLKASQAKQAKAAADAKVKAMEEGKKEREKSVEAAKARAERKKKDVAK
AKVEAAKAKENAFKAKQLKLKQDAEAQKRKVAQEAKEVKQERENKTKAVE
KAKKERADAAKRAEQEAKNKIAAEKRALQEAERERAAATRKAEAEARQRT
RDLAL*
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