mRNA_P-littoralis_Contig1209.22.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1209.22.2 vs. uniprot
Match: A0A6H5JJG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJG9_9PHAE) HSP 1 Score: 703 bits (1814), Expect = 3.070e-237 Identity = 368/661 (55.67%), Postives = 443/661 (67.02%), Query Frame = 1
Query: 547 SKRIWPDPMPVEKAQQHLEKRQRTKERTVAGAGRKN----ATCCRLGCVPKFMSSTSCPG------------------------------RVEYNLGFLEKEQDRMRSFTWEKDRKLFVSEHTPIAKLSRGSMLAAGSPVCNEAFKLFFGVSETLISSCKGTEKARATSSIGRTPIRASRDHPKLERVVAFLVRHEHIFAQKMPHQDESYLYLHSKNELYNDYLKDQRDFFKADPASMATFVCSKDYFNKVWRCYFPTLKLKPNGDFMLCQTCVLLKEKIHGTAGSRGIQNEAEREEHLQQYAEHVEEVSQDRLTSATFAKWAEIALMNGVPWEKLYFMVDAANQSNFATPLSASNAHGIDDKGYAERQKIYGVYVVGVSMDVFMAPQILTTGSNLVCTAIYEQFKELSEKWRKPLGDVVVQMDNTVSENKNNIIMGFCGALIARGVVRTMTLCFMMVGHTHIEIDQIFSRFSKGVKGRNVFSREHLGEVFEHSYRTVPVRSRTLENLGNFKGLVYGATRHVPGITGFQAFRISKEGPQIVVKVKRRMHHDTWLGFSPDGKTVGSGEGFAGWRILRTGAVRLEATPPFHLKDVDPEIIRQIEIRQRASWARLPASFPGDVQKQAETKDQQADSLRILRSTGEREFDLCTKWLP---PEDDE 2418
SKR WP+P EK L K+ V GAG K A CC L C +F G ++N +L EQDR T E DRK FV P KL++GSM+AA + VCN AF FFGVSETLISSCK T KA+A+SS+ R I ++RD PKLE VVAFL RHE ++ QKMP+ D+SYLYL SK ELY +Y K+ R+ + DPAS+A +CSK+YFN+VW +F LKLKPNGDFMLC+ C LLKEKIHG AGSRG+ +EAERE H Y EH+++V +DR+ A A +A NG PWE +Y VDAANQSNFATP+ AS AHG+DD+GYAERQKIYG V G+ M VFM PQIL TGSN+VCT ++ F EL+ +W+ LGDV +QMDNTVSENKNN IMGF AL+ RGV+R++TLCFMMVGHTHI+IDQ+FS F++ VKG VF+REHL E FE +Y+T+PV+ RTLENL NFK LV TR +P IT FQAF ISKEG IV KVK ++HHD WLGFS DGKTVG+G GF GWR++R VRLE TP + LK VD EIIR+I+ RQ ASW RLPA D ++ K Q DSLR+LR G R FDL T WLP P DD+
Sbjct: 67 SKRKWPEPWSPEKLNGWLHNEASKKKGGVGGAGGKGKHKIARCCGLDCALRFCKPDDEAGDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQHNWEYLRAEQDRFAKLTREPDRKAFVIAQVPPKKLAKGSMIAANTVVCNTAFTRFFGVSETLISSCKKTPKAQASSSVHRASIASTRDRPKLEGVVAFLHRHEDMYGQKMPNSDQSYLYLKSKLELYEEYSKNTRELYGQDPASLAERLCSKNYFNQVWSAHFGNLKLKPNGDFMLCEICTLLKEKIHGQAGSRGVLDEAERERHQSVYKEHLQDVERDRMYGARLENQAAVAKSNGTPWETVYLQVDAANQSNFATPIGASQAHGVDDRGYAERQKIYGALVSGIMMQVFMIPQILGTGSNMVCTTLFTLFMELTLQWKHSLGDVFIQMDNTVSENKNNFIMGFLAALVGRGVMRSVTLCFMMVGHTHIQIDQVFSCFARSVKGCAVFTREHLAEFFESAYKTLPVKCRTLENLANFKDLVQPVTRRIPNITKFQAFNISKEGTAIVAKVKTKLHHDDWLGFSADGKTVGTGAGFTGWRLMRERDVRLEETPSYLLKTVDEEIIRKIQTRQEASWKRLPAFVSLDPEQ---VKAQHLDSLRVLRMQGRRNFDLETNWLPDSFPADDD 724
BLAST of mRNA_P-littoralis_Contig1209.22.2 vs. uniprot
Match: A0A6H5KL03_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL03_9PHAE) HSP 1 Score: 600 bits (1548), Expect = 5.130e-198 Identity = 312/637 (48.98%), Postives = 411/637 (64.52%), Query Frame = 1
Query: 1096 ELYNDYLKDQRDFFKADPASMATFVCSKDYFNKVWRCYFPTLKLKPNGDFMLCQTCVLLKEKIHGT-AGSRGIQNEAEREEHLQQYAEHVEEVSQDRLTSATFAKWAEIALMNGVPWEKLYFMVDAANQSNFATPLSASNAHGIDDKGYAERQKIYGVYVVGVSMDVFMAPQILTTGSNLVCTAIYEQFKELSEKWRKPLGDVVVQMDNTVSENKNNIIMGFCGALIARGVVRTMTLCFMMVGHTHIEIDQIFSRFSKGVKGRNVFSREHLGEVFEHSYRTVPVRSRTLENLGNFKGLVYGATRHVPGITGFQAFRISKEGPQIVVKVKRRMHHDTWLGFSPDGKTVGSGEGFAGWRILRTGAVRLEATPPFHLKDVDPEIIRQIEIRQRASWARLPASFPGDVQKQAETKDQQADSLRILRSTGEREFDLCTKWLPPEDDEHNMEDDTPSSNGDSQTGGSVDGPLDEGDSXXXXXXXXXXXXXXXXXXXXXXXXXKAPVQ------HGRLGSFAAFLADGAPFLLGKVLRHRVDAKGVKEACLHWYTPSRALVDDAKSVPFDEYARATFNESYEVVGAGTK---KQRYVEDVSWEPITSIIASCDGLIGDGKKVPAAVKYALKDALENAPEAAHLE 2976
EL+++Y R + + +C++ YF K+W FP LK+KP+GDFMLC+ C LLK I GT +GSRGIQ+EAE+ ++Y +H+E+VS DR A AE A MNGVPWE+ Y M+D AN +NF PLS AHGIDDKGY ER K+YGV V GV M+VF APQIL TG+NLV TA+Y QF EL+ W LGDV VQ+DNTVSENKNN +MG A++ RG++RT+TLCFMMVGHTHI+IDQIFS F+K VKG ++F+RE LG+ F Y+ V V+ RTLENL NFK LV TR +P IT +QAF+I KEGP +VV VK++MHH+ WLGFS DGKTVGSG GF+ WR++ AV LEATPP+ LK V ++I ++++RQ+ASW +LP ++ GD +KQ K ADSLRILR+TG + FDL T WLP + DD+ S GD GG + L + D ++ HG + +F+ FL+DGAPFL+GKV+ R + G +E LHWYTP + LVD A +V FD YA A+F+ +Y A ++ +++ + D SWEP++ I+A+C LI G K+PA VK A P ++E
Sbjct: 13 ELFDEYESQTRKELHGELVGLDAALCTRQYFKKIWAEEFPHLKVKPSGDFMLCKICTLLKSAIFGTQSGSRGIQDEAEKNLKRKEYEDHMEDVSNDRKAIAKLKTAAENAKMNGVPWEQPYCMMDGANSNNFTVPLSKDKAHGIDDKGYGERAKVYGVLVAGVVMNVFFAPQILGTGTNLVATALYYQFMELTLSWGHTLGDVTVQVDNTVSENKNNYLMGILAAMVGRGIMRTVTLCFMMVGHTHIQIDQIFSCFAKAVKGVDIFTREELGDAFRRGYKKVEVKCRTLENLANFKDLVAPVTRRIPTITNYQAFKIYKEGPSMVVTVKKKMHHEDWLGFSEDGKTVGSGAGFSPWRLMHAHAVHLEATPPYELKLVQDDVIHRVDMRQQASWEKLPVAYVGDPEKQKRVKLDHADSLRILRTTGTKAFDLDTSWLPLQV----SGDDSESDPGDGGDGGGLSHGLSDDDDNSSFGDYLDERLRQHQQSGSAPQGGGRRLRDQQTWAHGTMNTFSFFLSDGAPFLVGKVIDKR-EVDGQEEVALHWYTPRKRLVDSAANVSFDTYAGASFSPTYIAGDANSRVNSRRKLLPDSSWEPVSGIVATCSALISGGSKIPAHVKQXPWQASGGGPAQPNVE 644
BLAST of mRNA_P-littoralis_Contig1209.22.2 vs. uniprot
Match: A0A6H5JUU1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUU1_9PHAE) HSP 1 Score: 384 bits (986), Expect = 6.740e-115 Identity = 245/657 (37.29%), Postives = 353/657 (53.73%), Query Frame = 1
Query: 1051 MPHQDESYLYLHSKNELYNDYLKDQRDFFKADPASMATFVCSKDYFNKVWRCYFPTLKLKPNGDFMLCQTCVLLKEKIHGTAGSRGIQNEAEREEHLQQYAEHVEEVSQDRLTSATFAKWAEIALMNGVPWEKLYFMVDAANQSNFATPLSASNAHGIDDKGYAERQKIYGVYVVGVSMDVFMAPQILTTGSNLVCTAIYEQFKELSEKWRK----PLGDVVV----QMDNTVSENKNNIIMGFCGALIARGVVRTMTLCFMMVGHTHIEIDQIFSRFSKGVKGRNVFSREHLGEVFEHSYRTVPVRSRTLENLGNFKGLVYGATRHVPGITGFQAFRISKEGP-QIVVKVKRRMHHDTWLGFSPDGKTVGSGEGFAGWRILRTGAVRLEATPPFHLKDVDPEIIRQIEIRQRASWARLPASFPGDVQKQAETKDQQADSLRILRSTGEREFDLCTKWLPPED----DEHNMEDDTPSSNGDSQT-----GGSVDGPLDEGD-SXXXXXXXXXXXXXXXXXXXXXXXXXKAPVQHGRLGSFAAFLADGAPFLLGKVLRHRVDAKGVKEACLHWYTPSRA-LVDDAKSVPFDEYARATFNESYEVV---GAGTK-KQRYVEDVSWEPITSIIASCDGLIGDGKKVPAAVKYALKDALE 2949
MPH+D + +K ELY D+L + + + D + SK +F ++ R P ++++ G+FM C CV LKE+ HG+ G + + + + A H + V DRL A A A +G P ++ +DAAN ++ A P HG D+GY+ERQKI V++ G ++V+ PQ L G NL CTA + + +K+ P G ++ Q+DN VSENKNN +G+ G L+A VVR + + FMMVGHTH +IDQ+FSRFS+G+KG+N+F+R HL E SY VPV TL N GNFKGL+ G VP IT ++AFR+ K G ++ V+VK+ MH W G DG + R++ PP+ LK V ++I+++E R AS RL A+FP D KD+Q S+R+LR TGEREFDL WLP D DE N+ DT +N Q G DG DE D + ++P ++GSFA F+A APFL+G+++ R+ +G + LHW PS L ++A SV EY+ +TF E + + G G K + V+DVSWEP+ I+A+C+ L+G+G+KVP V L+ A+E
Sbjct: 1 MPHKDHVVICSSNKEELYQDFLTEAKRVYPEDTSKRV----SKAHFFRIPRKDRPHIRVRVGGEFMKCDICVTLKERRHGSPGVKPSLDSSALASIDRDLAAHRQMVQADRLVIANRTGDAMRAKADGKPLNFVFMSIDAANSTSHALPAIYPPTHG-GDRGYSERQKIMAVHIEGQFVEVYFTPQYLGGGCNLACTAAHLAITRIIDKYHDSPPHPSGCIIQHAHWQVDNCVSENKNNFFLGYAGLLVAADVVRVVEIHFMMVGHTHTKIDQVFSRFSRGIKGKNIFTRTHLAEELRASYTEVPVFCSTLRNEGNFKGLLIGRVNRVPNITTYRAFRVEKGGDGRVKVRVKKHMHGAEWNGIHEDGNLNPDA---LPHDLFIGSPPRIQDAPPYKLKRVPEDVIQKVEQRYLASHERLAAAFPLDDGAVQRAKDEQKQSVRLLRQTGEREFDLPVHWLPVYDSGSGDEENVGPDTGDNNDAEQDFNGSGGHDHDGIDDEADDTSSDSDMEPEFRRRGRPRATGRPTTDRSPPISVQVGSFAFFVARRAPFLVGRIVAERLGEEGERGVDLHWLRPSSDYLSNNAASVTLREYSNSTFVEGFVLDTCNGNGRSGKAKRVKDVSWEPVEGIVATCERLVGNGRKVPTKVLRVLRAAVE 649
BLAST of mRNA_P-littoralis_Contig1209.22.2 vs. uniprot
Match: A0A6H5KA02_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA02_9PHAE) HSP 1 Score: 298 bits (763), Expect = 1.550e-85 Identity = 220/590 (37.29%), Postives = 293/590 (49.66%), Query Frame = 1
Query: 1246 MLCQTCVLLKEKIHGTAGSRGIQNEAEREEHLQQYAEHVEEVSQDR--LTSATFAKWAEIALMNGVPWEKLYFMVDAANQSNFATPLSASNAHGIDDKGYAERQKIYGVYVVGVSMDVFMAPQILTTGSNLVCTAIYEQFKELSEKWRKP-----LGDVVVQMDNTVSENKNNIIMGFCGALIARGVVRTMTLCFMMVGHTHIEIDQIFSRFSKGVKGRNVFSREHLGEVFEHSYRTVPVRSRTLENLGNFKGLVYGAT----RHVPGITGFQAFRISKEGPQIVVKVKRRMHHDTWLGFSPDGKTVGSGEGFAGWRILRTGAVRLEATPPFHLKDVDPEIIRQIEIRQRASWARLPASF---PGDVQKQAETKDQQADSLRILRSTGE-REFDLCTKWL----PPEDDEHNMEDDTPSSNGDSQTGGSVDGPLDEGDSXXXXXXXXXXXXXXXXXXXXXXXXXKAPVQHGRLGSFAAFLADGAPFLLGKVLRHRVDAKGVKEACLHWYTPSRALVD-DAKSVPFDEYARATFNESYEVVGAGTKKQRYVEDVSWEPITSIIASCDGLIGDGKKVPAAVKYALKDALENA 2955
M C C +KEK+HG G R IQN +R E ++ EH VS+DR LTS A E A NG P ++ D A Q +A H G++ERQK+ V G +DV PQ GSNLVCTA++ K LS KP + + +Q+DN V ENKNNI++ F G L+A GV+ + +CF++VGHTHI+IDQ+FSRFS G GR++F+R LGE+F SY+ +PV TL NLGNFKGL R + IT F+AFR+ K ++ V KR MH D WLG + G G+ R+ R A + PPF LK VDP +I IE R A+ RL A++ P V +Q+DSL++LRS G FDL +WL PP P S G + DG D+ P +G A F A+ APF+LG+VL DA V +HWY P V A S ++YA A F++ + ++ +G K++ D S EPIT IIA C L G +PA +K L + A
Sbjct: 1 MKCSDCTEIKEKLHGAPGIRPIQNTRQRAEIVRHQKEHHHIVSKDRELLTSRMEAARREQA--NGTPLNQVTIQQDCACQIRYALGTVHPQTHA----GFSERQKVMAVQAEGAFVDVHFVPQTTGGGSNLVCTALWLALKRLSAMGTKPGQRFYIKRLHLQLDNCVGENKNNIVLAFIGGLVAAGVIGSAEVCFLIVGHTHIKIDQVFSRFSVGTLGRSIFTRSQLGELFRESYKELPVHVGTLTNLGNFKGLYLDDNKLNLRKIRNITTFRAFRVGKVAGEVSVWAKRFMHSDAWLGLTATG---GAQVDANPHRLFRFAAPTFDNVPPFELKTVDPTVIALIEKRYIATRPRLEAAYALAPDGVVDALLA--EQSDSLKLLRSGGTINNFDLPMEWLHTAIPPAP--------LPPS-----AGATADGV----DNTPSRANGVSEPSKRKALNPVRPTSLTPP----SVGDIAFFKAEEAPFVLGEVLSIAADASPVN-VNIHWYGPINNTVRAGAGSATVEDYAVARFSKDF-ILTSGAKRR--TPDASDEPITRIIACCSSLTSTGN-IPARIKKVLMETCRPA 553
BLAST of mRNA_P-littoralis_Contig1209.22.2 vs. uniprot
Match: A0A6H5L233_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L233_9PHAE) HSP 1 Score: 260 bits (664), Expect = 5.160e-76 Identity = 122/230 (53.04%), Postives = 164/230 (71.30%), Query Frame = 1
Query: 1621 GSNLVCTAIYEQFKELSEKWRKPLGDVVVQMDNTVSENKNNIIMGFCGALIARGVVRTMTLCFMMVGHTHIEIDQIFSRFSKGVKGRNVFSREHLGEVFEHSYRTVPVRSRTLENLGNFKGLVYGATRHVPGITGFQAFRISKEGPQIVVKVKRRMHHDTWLGFSPDGKTVGSGEGFAGWRILRTGAVRLEATPPFHLKDVDPEIIRQIEIRQRASWARLPASFPGDVQK 2310
G+NLV TA++ QF EL+ W L DV V +DNTV+EN NN MG A++ RG++RT+TLCFMMVGHTHI++DQIFS +K V G +F+RE +G+ F Y+ + V+ RTLE+L NFK LV TR +P IT ++AF+I K+GP +VV VK++MHH+ WLGFS DGKTVGS GF WR++ AV L+ATPP+ LK V EII + ++RQ+ASW LP + G ++
Sbjct: 6 GTNLVATALHYQFMELTLSWGHTLVDVTVHVDNTVAENMNNYFMGILAAMVGRGIMRTVTLCFMMVGHTHIQVDQIFSCLAKAVGGVEIFTREEVGDAFRRGYKKIQVKCRTLEHLANFKELVAPVTRRIPIITNYRAFKIYKKGPSVVVTVKKKMHHEDWLGFSEDGKTVGSRAGFRPWRLMHAHAVYLKATPPYELKLVQDEIIHRGDLRQQASWENLPVANAGGFRR 235
BLAST of mRNA_P-littoralis_Contig1209.22.2 vs. uniprot
Match: A0A6H5JCW3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCW3_9PHAE) HSP 1 Score: 266 bits (681), Expect = 3.840e-74 Identity = 180/424 (42.45%), Postives = 243/424 (57.31%), Query Frame = 1
Query: 1708 QMDNTVSENKNNIIMGFCGALIARGVVRTMTLCFMMVGHTHIEIDQIFSRFSKGVKGRNVFSREHLGEVFEHSYRTVPVRSRTLENLGNFKGLVYGATRHVPGITGFQAFRISKEGP-QIVVKVKRRMHHDTWLGFSPDGKTVGSGEGFAGWRILRTG-AVRLEATPPFHLKDVDPEIIRQIEIRQRASWARLPASFPGDVQKQAETKDQQADSLRILRSTGEREFDLCTKWLPPEDDEHNMEDDTPSSNGDSQTGGSVDGPLDEGDSXXXXXXXXXXXXXXXXXXXXXXXXXKAPVQHGRL----GSFAAFLADGAPFLLGKVLRHRVDAKGVKEACLHWYTPSRALV-DDAKSVPFDEYARATFNESYEVVGA-GTK---KQRYVEDVSWEPITSIIASCDGLIGDGKKVPAAVKYALKDAL 2946
Q+DN SENKNN +GF G L+A V+R + + FMMVGHTH++IDQIFSRFS+G+KG+N+F+R L EV + SY VPV TL N GNF GL+ G VP IT ++AFR+ K G ++ V+VK MH G +G + A L G R++ PP+ LK+V EIIR++E R AS L A++P Q+ K++Q DS+R L+ TG REFDL WLP DD E + N + GS GP D XXXXXXXXXXXX ++ + GSFA F+A GAPFL+G++ VD G + LHW+ P+ D A S+ DEY TF E Y + + GT+ K + V+DVSWEP+ I+A+CD L+G+G+K+P V L+ +
Sbjct: 20 QVDNCASENKNNFFLGFAGLLVAASVIRVVEINFMMVGHTHMKIDQIFSRFSRGIKGKNIFTRTQLAEVLQASYTEVPVFCSTLGNEGNFNGLLQGRVNRVPDITTYRAFRVEKGGDGRVKVRVKHHMHGTECKGIGRNGDVDPN----APPHDLFIGHPPRIQDAPPYELKEVSDEIIRKVEQRYLASHESLAATYPLGAQR---AKNEQMDSVRRLKETGLREFDLPVHWLP--DDYGGAEAGVRNGNDIEEEDGSG-GPGDRXXXXXXXXXXXXXXXADCFRRGRSRAIGRSANDRDVVSIEEGSFAFFVARGAPFLVGRIAAESVDRDGTRGVDLHWFRPTNDHTRDKAASLTLDEYGERTFVEGYVMTASDGTRRSGKAKKVKDVSWEPVEGIVATCDKLVGNGRKIPNRVLKVLRSVV 433
BLAST of mRNA_P-littoralis_Contig1209.22.2 vs. uniprot
Match: A0A6H5JXN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN7_9PHAE) HSP 1 Score: 242 bits (617), Expect = 1.250e-65 Identity = 184/538 (34.20%), Postives = 249/538 (46.28%), Query Frame = 1
Query: 1174 SKDYFNKVWRCYFPTLKLKPNGDFMLCQTCVLLKEKIHGTAGSRGIQNEAEREEHLQQYAEHVEEVSQDRLTSATFAKWAEIALMNGVPWEKLYFMVDAANQSNFATPLSASNAHGIDDKGYAERQKIYGVYVV-------GVSMDVFMAPQILTTGSNLVCTAIY---EQFKELSEKWRKPLGDVVVQMDNTVSENKNNIIMGFCGALIARGVVRTMTLCFMMVGHTHIEIDQIFSRFSKGVKGRNVFSREHLGEVFEHSYRTVPVRSRTLENLGNFKGLVYGAT----RHVPGITGFQAFRISKEGPQIVVKVKRRMHHDTWLGFSPDGKTVGSGEGFAGWRILRTGAVRLEATPPFHLKDVDPEIIRQIEIRQRASWARLPASF---PGDVQKQAETKDQQADSLRILRSTGE-REFDLCTKWL----PPEDDEHNMEDDTPSSNGDSQTGGSVDGPLDEGDSXXXXXXXXXXXXXXXXXXXXXXXXXKAPVQHGRLGSFAAFLADGAPFLLGKVLRHRVDAKGVKEACLHWYTP 2721
S+ YFN++WR P +KL GDFM C C + EK+HG G R IQ+ +R E ++ EH VS+DR + + A+ NG P ++ D A Q +A H +ERQ+++G GV F V A+ + + W + L DN V ENKNNI++ F G L+A GV+ + +CF++VGHTHI+IDQ+FSRFS G GR++F+R LGE F SY+ +PV TL NLGNFKGL R + +T F AFR+ K ++ V KR MH D WLG + G G+ R+ R A + PPF LK VDP +I IE R A+ RL A++ P V +Q+DSL++LRS G FDL +WL PP P S G + DG D+ P +G A F A+ APF+LG+VL DA V +HWY P
Sbjct: 29 SRPYFNQIWREERPLIKLARFGDFMKCSDCTEINEKLHGAPGIRPIQDTRQRAEIVRHQKEHHHIVSKDRELLTSHMEAAKREQANGTPLNQVTIQQDCACQIRYALGTVHPQTHA------SERQRLFGAAEGHGRPRRRGVRGRPFRPADNRWREQPGVHGAVVGPQTTVCNVDQAWPEVLHQASPPSDNCVGENKNNIVLAFIGGLVAAGVIGSAEVCFLIVGHTHIKIDQVFSRFSVGTLGRSIFTRSQLGERFRESYKELPVHVGTLTNLGNFKGLYLDDNKLNLRRIRNVTKFWAFRVGKVAGEVSVWAKRFMHSDAWLGLTATG---GAQVDANPHRLFRFAAPTFDNVPPFELKTVDPTVIALIEKRYIATRPRLEAAYALAPDGVVDALLA--EQSDSLKLLRSGGTINNFDLPMEWLHTAIPPAP--------LPPS-----AGATADGV----DNTPSRANGVSEPSKRKALNPVRPTSLTPP----SVGDIAFFKAEEAPFVLGEVLSIAADASPVN-VNMHWYGP 533
BLAST of mRNA_P-littoralis_Contig1209.22.2 vs. uniprot
Match: A0A6H5KAY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY2_9PHAE) HSP 1 Score: 214 bits (544), Expect = 1.160e-56 Identity = 158/447 (35.35%), Postives = 214/447 (47.87%), Query Frame = 1
Query: 1621 GSNLVCTAIYEQFKELSEKWRKP-----LGDVVVQMDNTVSENKNNIIMGFCGALIARGVVRTMTLCFMMVGHTHIEIDQIFSRFSKGVKGRNVFSREHLGEVFEHSYRTVPVRSRTLENLGNFKGLVYGAT------------------------------RHVPGITGFQAFRISKEGPQIVVKVKRRMHHDTWLGFSPDGKTVGSGEGFAGWRILRTGAVRLEATPPFHLKDVDPEIIRQIEIRQRASWARLPASF---PGDVQKQAETKDQQADSLRILRSTGE-REFDLCTKWL----PPEDDEHNMEDDTPSSNGDSQTGGSVDGPLDEGDSXXXXXXXXXXXXXXXXXXXXXXXXXKAPVQHGRLGSFAAFLADGAPFLLGKVLRHRVDAKGVKEACLHWYTPSRALVD-DAKSVPFDEYARATFNESYEVVGAGTKKQR 2829
GSNLVCTA++ K LS W KP + + +Q+DN V ENKNNI++ F G L+A GV+ + +CF++VGHTHI+IDQ+FSRFS G GR++F+R LGE+F SY+ +PV TL NLGNFKGL R + IT F+AFR+ K ++ V KR MH D WLG + G G+ R+ R A + PPF LK VDP +I IE R A+ RL A++ P V +Q+DSL++LRS G FDL +WL PP P S G + DG D+ P +G A F A+ APF+LG+VL DA V +HWY P V A S ++YA A F++ + ++ +G +R
Sbjct: 10 GSNLVCTALWLALKRLSAMWTKPGQRFYIKRLHLQLDNCVGENKNNIVLAFIGGLVAAGVIGSAEVCFLIVGHTHIKIDQVFSRFSVGTLGRSIFTRSQLGELFRESYKELPVHVGTLTNLGNFKGLYLDDNKLXLPLKPTXXXXXXXXXXXXXXXXXXXNLRKIRNITTFRAFRVGKVAGEVSVWAKRFMHSDAWLGLTATG---GAQVDANPHRLFRFAAPTFDNVPPFELKTVDPTVIALIEKRYIATRPRLEAAYALAPDGVVDALLA--EQSDSLKLLRSGGTINNFDLPMEWLHTAIPPAP--------LPPS-----AGATADGV----DNTPSRANGVSEPSKRKVLNPVRPTSLTPP----SVGDIAFFKAEEAPFVLGEVLSIAADASPVN-VNIHWYGPINNTVRAGAGSATVEDYAVARFSKDF-ILTSGASAER 428
BLAST of mRNA_P-littoralis_Contig1209.22.2 vs. uniprot
Match: A0A6H5KN27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN27_9PHAE) HSP 1 Score: 196 bits (499), Expect = 3.360e-53 Identity = 106/233 (45.49%), Postives = 141/233 (60.52%), Query Frame = 1
Query: 1621 GSNLVCTAIYEQFKELSEKWRKP-----LGDVVVQMDNTVSENKNNIIMGFCGALIARGVVRTMTLCFMMVGHTHIEIDQIFSRFSKGVKGRNVFSREHLGEVFEHSYRTVPVRSRTLENLGNFKGLVYGAT----RHVPGITGFQAFRISKEGPQIVVKVKRRMHHDTWLGFSPDGKTVGSGEGFAGWRILRTGAVRLEATPPFHLKDVDPEIIRQIEIRQRASWARLPASF 2292
GSNLVCTA++ K LS W KP + + +Q+DN V ENKNNI++ F G L+A GV+ + +CF++VGHTHI+IDQ+FSRFS G GR++F+R LGE+F SY+ +PV TL NLGNFKGL R + IT F+AFR+ K ++ V KR MH D WL + G G+ R+ R A + PPF LK VDP +I IE R A+ RL A++
Sbjct: 10 GSNLVCTALWLALKRLSAMWTKPGQRFYIKRLHLQLDNCVGENKNNIVLAFIGGLVAAGVIGSAEVCFLIVGHTHIKIDQVFSRFSVGTLGRSIFTRSQLGELFRESYKELPVHVGTLTNLGNFKGLYLDDNKLNLRKIRNITTFRAFRVGKVAGEVSVWAKRFMHSDAWLDLTATG---GAQVAANPHRLFRFAAPTFDNVPPFELKTVDPTVIALIEKRYIATRPRLEAAY 239
BLAST of mRNA_P-littoralis_Contig1209.22.2 vs. uniprot
Match: A0A6H5JTH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTH9_9PHAE) HSP 1 Score: 206 bits (524), Expect = 2.000e-52 Identity = 134/345 (38.84%), Postives = 181/345 (52.46%), Query Frame = 1
Query: 1426 MNGVPWEKLYFMVDAANQSNFATPLSASNAHGIDDKGYAERQKIYGVYVVGVSMDVFMAPQ-------ILTTGSNLVCTAIYEQFKELSEKWRKP-----LGDVVVQMDNTVSENKNNIIMGFCGALIARGVVRTMTLCFMMVGHTHIEIDQIFSRFSKGVKGRNVFSREHLGEVFEHSYRTVPVRSRTLENLGNFKGLVYGAT----RHVPGITGFQAFRISKEGPQIVVKVKRRMHHDTWLGFSPDGKTVGSGEGFAGWRILRTGAVRLEATPPFHLKDVDPEIIRQIEIRQRASWARLPASF---PGDVQKQAETKDQQADSLRILRSTGE-REFDLCTKWL 2400
M PW LY ++S F T +S ++GV + +APQ +L GSNLVCTA++ K LS W KP + + +Q+ N V E KNNI++ F G L+A GVV + +CF++VGHT I+ID +FSRFS G GR++F+R LGE+F SY+ +PV TL NLGNFKGL R + IT F+AFR+ K ++ V KR MH D WLG + G G+ R+ R A + PPF LK VDP +I IE R A+ RL A++ P V +Q+DSL++LRS G FDL +WL
Sbjct: 234 MPNKPWTTLYTATKGVSKSCFFTVVS----------------------LLGVGGRIPIAPQTAACVPALLCGGSNLVCTALWLALKRLSAMWAKPGQRFYIKRLHLQLHNCVGEKKNNIVLAFIGGLVAAGVVVSAEVCFLIVGHTLIKIDHVFSRFSVGTLGRSIFTRSQLGELFRESYKELPVHVGTLTNLGNFKGLYLDDNKLNLRKIRNITTFRAFRVGKVAGEVSVWAKRFMHSDAWLGLTATG---GAQVDDNPHRLFRFAAPTFDNVPPFELKTVDPTVIALIEKRYIATRPRLEAAYALAPDGVVDALLA--EQSDSLKLLRSGGTINNFDLPMEWL 551 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1209.22.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1209.22.2 >prot_P-littoralis_Contig1209.22.2 ID=prot_P-littoralis_Contig1209.22.2|Name=mRNA_P-littoralis_Contig1209.22.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=923bp MPVEKAQQHLEKRQRTKERTVAGAGRKNATCCRLGCVPKFMSSTSCPGRVback to top mRNA from alignment at P-littoralis_Contig1209:26857..32796+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1209.22.2 ID=mRNA_P-littoralis_Contig1209.22.2|Name=mRNA_P-littoralis_Contig1209.22.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=5940bp|location=Sequence derived from alignment at P-littoralis_Contig1209:26857..32796+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1209:26857..32796+ >mRNA_P-littoralis_Contig1209.22.2 ID=mRNA_P-littoralis_Contig1209.22.2|Name=mRNA_P-littoralis_Contig1209.22.2|organism=Pylaiella littoralis U1_48|type=CDS|length=2769bp|location=Sequence derived from alignment at P-littoralis_Contig1209:26857..32796+ (Pylaiella littoralis U1_48)back to top |